Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0014911

Physical Location & Seq

Genomic Coordinates Reverse (-)

549223 .. 553325

Gene Structure 4103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG003100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3183 bp

ATGGCGTCTTCATCAAACAAGAAAACATTGCCTAACTCACCATCATCCGTCGGCCGGCCACCGTCATCATCTGTCAAATTTGCTCGCCGGACGTCGAGCGGGCGTGTCATGAGCTTGTCCCGGGACGATGACCTGGACATGAGCGGAGAAATGTCGGGTGAAAATGACTACATCAATTACACGGTGATGATGCCGCCGACGCCGGACAACCAGCCTGGAGAGGAAGCCAAGGCCGACAGTACTGCGGGGACTTACGCTGCCTCACGGTTCGGGACAGAGCCGAGACGACGGAATGATGGCGGCGGCGGCGGCGGCGAAGCGTCGAAGATGGATAGGAGAATGTCGGTGATGAGCTCATCTAATAACAAATCAATATTGTTGAGAAGCCAAACTGGGGACTTTGATCACAACCGTTGGTTATTCGAGACAAAGGGAACGTACGGCATCGGAAACGCGTTTTGGTCGCAGAAGGACGAGGACTCGTATAATGGGCCCACAGGCGATATGAACATGCAGGACTTTATTGACAAGCCATGGAAGCCACTCACCAGGAAGGTTTCAGTTCCTCCTGCTATTCTTAGCCCTTACCGGTTATTGGTGCTGATTCGTCTGATAGTACTTTTCTTTTTCCTAGTGTGGCGAGTACAGAATCCAAACCCAGATGCAATGTGGCTATGGGGGATTTCCATAGTTTGTGAGATTTGGTTTGCGTTCTCATGGCTACTAGACATACTTCCCAAAATGAATCCCATAAACCGTGCCACAGACTTGTCTGCCCTACATGACAAGTTTGAGCAGCCCTCGCCGCAAAACCCCACCGGAAGGTCTGACCTGCCTGGCGTCGATGTATTCGTGTCCACTGCCGACGCAGAGAAGGAACCACCGCTTGTCACAGCCAATACCATGCTCTCCATCCTTGCTGTTGATTACCCCGTGGAAAAACTTTCAGCCTACATTTCAGATGATGGCGGTGCCATTCTCACATTTGAGGCCATGGCCGAGGCTGTAGCCTTTGCTGAGGTCTGGGTACCCTTTTGCCGAAAACACAACATAGAGCCAAGGAATCCAGACAGTTACTTCAACAGCAAGGTAGACCCAACCAAGAACAAGAAGCGGCCCGATTTTGTCAAGGACAGGCGTTGGATCAAGAGAGAGTATGATGAGTTCAAGGTCAGGATCAACGGTCTGCCTGATGTAATACGTAAGCGATGTGAAATGTATAACTGTAGAGAGGAAAGGAAGCTTACAAAGGAAACAAGTACTGGTGGATCAGCTCGATCAATAGAGCCATTGGGTGATAATGCTGTTGATGAGCCAGGTTCCACAGTCCCCAAGGCCACGTGGATGGCCGACGGAACACACTGGCCGGGGACATGGCTGGAACCTTGTGCTGATCATAAAAAGGGAGACCATGCTGGCATCCTACAGGTGATGAGTAAGGTCCCAGATGTGGAGCCCGTAATGGGTTTTCTTGACGAGAAAAAACTAGACTTCACAGGAGTGGACATTCGGGTCCCCATGTTTGCCTATGTGTCCAGGGAAAAGCGTCCTGGCTACGACCACAACAAGAAGGCAGGAGCCATGAATGCCATGGTTAGAGCATCAGCAGTATTGTCTAACGGCCCATTTATACTGAATCTCGACTGTGACCATTATATCTATAACTCCAAGGCTATAAGGGAAGGAATGTGCTTCATGATGGACCGTGGAGGAGATCGCATTTGCTACATACAGTTCCCTCAGAGATTCGAAGGGATCGATCCATCTGATCGTTATGCTAATCATAACACAGTCTTCTTTGATGGAAATATGAGAGCCTTGGACGGTCTGCAAGGGCCAGTGTATGTGGGAACTGGGTGCATGTTCAGGCGTTTTGCACTCTACGGCTTCCACCCGCCAAGGGCGCATGAGTACCTGGGGGTATTTGGCCACAAAAAAGCTCCAGCACCACAATATCAGACTATGGATTCTGTAAGATTACGGCCTTCTGAAGAAGGAGACGAAGCAGCGCCTCTAGCAGAACACCCCGACTTGGGACTTCCAATCAAGTTTGGAAATTCTCAAGTATTCACTGATTCCATAGCTGTTGCTGAGTTTCAAGGACGGCCTCTTGCTGATCATGAAACAGTCAAGAATGGCCGCCCTCCTGGCGCCCTGCTAGAACCACGTCCCCCACTCGATGCACCCACTGTTGCCGAAGCGGTTGCTGTTATTTCCTGCTGGTTTGAGGAAAACACCGAATGGGGAGACAGGATAGGTTGGATTTATGGATCGGTGACAGAGGATGTGGTGACAGGTTACCGAATGCACAATCGTGGATGGCGGTCTGTGTATTGCATAACCAAGCGTGACGCATTCCGCGGCACTGCACCTATCAACCTGACAGACAGATTGCACCAGGTGCTTCGATGGGCCACTGGTTCAGTGGAAATCTTCTACTCTAGAAACAATGCATTCCTGGCATGCCGACGCCTCAAGTTCCTACAGCGTATTGCATACCTCAATGTCGGCATTTATCCCTTCACCTCCGTCTTTCTGGTGGTTTATTGTTTCCTCCCTGCACTCTGCCTCTTTTCAGGACAATTCATAGTGGCAGGTCTAAACATTCCCTTCCTTTCCTACCTCCTTACCATCACGATATGTCTCGTTCTTATCTCCATACTTGAAGTCAGATGGTCCGGCATTGGTCTTGAGGAATGGTGGCGTAATGAGCAGTTTTGGTGCATTGGTGGAACCAGTGCTCACCTTGCCGCTGTCATCCAGGGACTCCTCAAAGTCATAGCGGGCATCGAAATTTCCTTCACCTTAACCTCCAAGTCTGCCGGCGATGACGAAGATGACATTTACGCTGATCTTTACATAGTCAAATGGACAAGTCTCTTCATCATGCCAATATTAATCATAGTTACCAACATTATTGCAGCTGTCATTGGAATATCAAGGACCTTATACGCTGTCATACCCCAATGGAATAAGCTACTCGGAGGACTCTTCTTCAGTTTTTGGGTGTTGGCTCACATGTACCCATTTATGAAAGGCTTGATGGGAAGGAGAGGAAGGATACCTACCATCGTATATGTATGGGCGGGACTGCTCGCTATTACAGTGTCTTTGCTTTGGCTGACACTCAATCCTCCTGGCAGTGGTATGACTGGTGCTGGTGGTGGAGAGATAAAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0008152 GO:0009846 GO:0009856 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0022414 GO:0032501 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0051704 GO:0051753 GO:0070085 GO:0071554 GO:0071669 GO:0097502

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

1060

Amino Acids

118.6

Weight (kDa)

6.83

Isoelectric Point (pI)

47.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	281 - 1047	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33100 AT2G33100
fragaria_vesca	FvH4_4g00350
malus_domestica	MD04G1004000.v1.1
prunus_persica	Prupe.1G003500_v2.0.a1
pyrus_communis	pycom04g00410
rosa_chinensis	RchiOBHm_Chr4g0385221
rosa_laevigata	RLG00000010247
rosa_multiflora	Rmu_sc0008734.1_g000009
rosa_roxburghii	Rroxscaffold_5G00333120
rosa_rugosa	Rorug03G0300000
rosa_samantha	Rh4AG003400 Rh4BG002800 Rh4CG003900 Rh4DG003100
rosa_wichuraiana	Rw4G000560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1511
AatII	GACGTC	1 cut(s)	95
Acc36I	ACCTGC	2 cut(s)	840, 2585
Acc65I	GGTACC	1 cut(s)	1027
AccB1I	GGYRCC	3 cut(s)	971, 1027, 2150
AccBSI	CCGCTC	2 cut(s)	99, 144
AccI	GTMKAC	1 cut(s)	1092
AccII	CGCG	2 cut(s)	455, 2361
AclWI	GGATC	6 cut(s)	1151, 1184, 1276, 1754, 1763, 2278
AcoI	YGGCCR	7 cut(s)	52, 56, 996, 1347, 1364, 1927, 2137
AcsI	RAATTY	3 cut(s)	77, 2056, 2793
AcuI	CTGAAG	2 cut(s)	2010, 2980
AcvI	CACGTG	1 cut(s)	1341
AcyI	GRCGYC	6 cut(s)	5, 92, 200, 840, 2151, 2470
AdeI	CACNNNGTG	1 cut(s)	2401
AfaI	GTAC	8 cut(s)	241, 440, 618, 645, 1029, 1261, 1913, 3023
AflIII	ACRYGT	2 cut(s)	453, 3018
AgeI	ACCGGT	1 cut(s)	588
AgsI	TTSAA	4 cut(s)	1081, 1168, 2099, 2666
AjiI	CACGTC	1 cut(s)	2168
AjuI	GAANNNNNNNTTGG	2 cut(s)	442, 474
AleI	CACNNNNGTG	2 cut(s)	1499, 2313
AluBI	AGCT	8 cut(s)	114, 354, 1243, 1274, 1940, 2084, 2924, 2977
AluI	AGCT	8 cut(s)	114, 354, 1243, 1274, 1940, 2084, 2924, 2977
Alw21I	GWGCWC	2 cut(s)	356, 2743
Alw26I	GTCTC	7 cut(s)	277, 419, 1401, 1992, 2241, 2648, 2882
AlwI	GGATC	6 cut(s)	1151, 1184, 1276, 1754, 1763, 2278
Ama87I	CYCGRG	1 cut(s)	120
ApaI	GGGCCC	1 cut(s)	495
ApeKI	GCWGC	4 cut(s)	257, 796, 2006, 2921
ApoI	RAATTY	3 cut(s)	77, 2056, 2793
AseI	ATTAAT	1 cut(s)	2897
AsiGI	ACCGGT	1 cut(s)	588
Asp718I	GGTACC	1 cut(s)	1027
AspLEI	GCGC	3 cut(s)	1906, 2011, 2153
AsuC2I	CCSGG	3 cut(s)	121, 122, 1368
AsuII	TTCGAA	1 cut(s)	1749
AvaI	CYCGRG	1 cut(s)	120
AvaII	GGWCC	5 cut(s)	1441, 1513, 1702, 2676, 2943
BaeGI	GKGCMC	1 cut(s)	495
BalI	TGGCCA	1 cut(s)	1929
BanI	GGYRCC	3 cut(s)	971, 1027, 2150
BanII	GRGCYC	3 cut(s)	356, 495, 1458
BarI	GAAGNNNNNNTAC	2 cut(s)	3049, 3081
BbrPI	CACGTG	1 cut(s)	1341
BbsI	GAAGAC	1 cut(s)	1786
Bbv12I	GWGCWC	2 cut(s)	356, 2743
BbvCI	CCTCAGC	1 cut(s)	1017
BbvI	GCAGC	4 cut(s)	244, 808, 2018, 2933
BceAI	ACGGC	5 cut(s)	457, 1636, 1900, 1997, 2120
BcgI	CGANNNNNNTGC	4 cut(s)	224, 258, 2186, 2220
BciVI	GTATCC	1 cut(s)	3054
BclI	TGATCA	3 cut(s)	403, 1393, 2116
BcnI	CCSGG	3 cut(s)	121, 122, 1368
BcoDI	GTCTC	7 cut(s)	277, 419, 1401, 1992, 2241, 2648, 2882
BfaI	CTAG	6 cut(s)	632, 725, 1487, 2015, 2159, 2442
BfmI	CTRYAG	4 cut(s)	1005, 1225, 1424, 2483
BfoI	RGCGCY	2 cut(s)	2012, 2154
BfuAI	ACCTGC	2 cut(s)	840, 2585
BfuI	GTATCC	1 cut(s)	3054
BglI	GCCNNNNNGGC	1 cut(s)	2148
BmcAI	AGTACT	3 cut(s)	241, 618, 1261
Bme18I	GGWCC	5 cut(s)	1441, 1513, 1702, 2676, 2943
BmeT110I	CYCGRG	1 cut(s)	120
BmgBI	CACGTC	1 cut(s)	2168
BmrI	ACTGGG	2 cut(s)	402, 1863
BmsI	GCATC	7 cut(s)	180, 453, 652, 1428, 1610, 2170, 2796
BmuI	ACTGGG	2 cut(s)	402, 1863
BpiI	GAAGAC	1 cut(s)	1786
BplI	GAGNNNNNCTC	2 cut(s)	785, 817
BpmI	CTGGAG	2 cut(s)	237, 1926
Bpu10I	CCTNAGC	1 cut(s)	1017
Bpu14I	TTCGAA	1 cut(s)	1749
BpuEI	CTTGAG	3 cut(s)	2046, 2459, 2711
BpuMI	CCSGG	3 cut(s)	121, 122, 1368
Bsa29I	ATCGAT	1 cut(s)	1758
BsaAI	YACGTR	2 cut(s)	1202, 1341
BsaHI	GRCGYC	6 cut(s)	5, 92, 200, 840, 2151, 2470
BsaI	GGTCTC	1 cut(s)	1401
BsaWI	WCCGGW	2 cut(s)	588, 818
Bse118I	RCCGGY	3 cut(s)	54, 588, 2822
Bse1I	ACTGG	8 cut(s)	397, 1267, 1367, 1838, 1858, 2422, 2736, 3157
Bse3DI	GCAATG	2 cut(s)	26, 672
BseCI	ATCGAT	1 cut(s)	1758
BseGI	GGATG	7 cut(s)	44, 912, 1350, 1419, 2290, 2324, 2757
BseMI	GCAATG	2 cut(s)	26, 672
BseMII	CTCAG	3 cut(s)	1008, 1754, 2082
BseNI	ACTGG	8 cut(s)	397, 1267, 1367, 1838, 1858, 2422, 2736, 3157
BseRI	GAGGAG	2 cut(s)	1725, 2759
BseSI	GKGCMC	1 cut(s)	495
BseX3I	CGGCCG	1 cut(s)	52
BseXI	GCAGC	4 cut(s)	244, 808, 2018, 2933
BsgI	GTGCAG	2 cut(s)	2352, 2544
Bsh1236I	CGCG	2 cut(s)	455, 2361
Bsh1285I	CGRYCG	1 cut(s)	55
BshNI	GGYRCC	3 cut(s)	971, 1027, 2150
BshTI	ACCGGT	1 cut(s)	588
BshVI	ATCGAT	1 cut(s)	1758
BsiEI	CGRYCG	1 cut(s)	55
BsiHKAI	GWGCWC	2 cut(s)	356, 2743
BsiHKCI	CYCGRG	1 cut(s)	120
BsiSI	CCGG	9 cut(s)	55, 88, 121, 203, 589, 819, 1367, 2679, 2823
BsiWI	CGTACG	1 cut(s)	438
BsmAI	GTCTC	7 cut(s)	277, 419, 1401, 1992, 2241, 2648, 2882
BsmBI	CGTCTC	2 cut(s)	277, 1992
BsmI	GAATGC	4 cut(s)	1591, 2310, 2354, 2453
Bso31I	GGTCTC	1 cut(s)	1401
BsoBI	CYCGRG	1 cut(s)	120
Bsp119I	TTCGAA	1 cut(s)	1749
Bsp120I	GGGCCC	1 cut(s)	491
Bsp1286I	GDGCHC	4 cut(s)	356, 495, 1458, 2743
Bsp19I	CCATGG	3 cut(s)	533, 993, 1590
BspCNI	CTCAG	3 cut(s)	1009, 1753, 2083
BspDI	ATCGAT	1 cut(s)	1758
BspFNI	CGCG	2 cut(s)	455, 2361
BspHI	TCATGA	3 cut(s)	108, 1695, 2119
BspMI	ACCTGC	2 cut(s)	840, 2585
BspPI	GGATC	6 cut(s)	1151, 1184, 1276, 1754, 1763, 2278
BspT104I	TTCGAA	1 cut(s)	1749
BspT107I	GGYRCC	3 cut(s)	971, 1027, 2150
BspTNI	GGTCTC	1 cut(s)	1401
BsrBI	CCGCTC	2 cut(s)	99, 144
BsrDI	GCAATG	2 cut(s)	26, 672
BsrFI	RCCGGY	3 cut(s)	54, 588, 2822
BsrI	ACTGG	8 cut(s)	397, 1267, 1367, 1838, 1858, 2422, 2736, 3157
BssAI	RCCGGY	3 cut(s)	54, 588, 2822
BssNI	GRCGYC	6 cut(s)	5, 92, 200, 840, 2151, 2470
BssT1I	CCWWGG	9 cut(s)	228, 533, 993, 1058, 1332, 1590, 1668, 1818, 1898
Bst6I	CTCTTC	2 cut(s)	2885, 2996
BstACI	GRCGYC	6 cut(s)	5, 92, 200, 840, 2151, 2470
BstAPI	GCANNNNNTGC	1 cut(s)	2401
BstBAI	YACGTR	2 cut(s)	1202, 1341
BstBI	TTCGAA	1 cut(s)	1749
BstC8I	GCNNGC	8 cut(s)	56, 85, 101, 1417, 2464, 2785, 2824, 3096
BstDEI	CTNAG	4 cut(s)	578, 1017, 1740, 2091
BstDSI	CCRYGG	6 cut(s)	533, 933, 993, 1590, 1705, 2359
BstEII	GGTNACC	1 cut(s)	2297
BstF5I	GGATG	7 cut(s)	44, 912, 1350, 1419, 2290, 2324, 2757
BstFNI	CGCG	2 cut(s)	455, 2361
BstH2I	RGCGCY	2 cut(s)	2012, 2154
BstHHI	GCGC	3 cut(s)	1906, 2011, 2153
BstMAI	GTCTC	7 cut(s)	277, 419, 1401, 1992, 2241, 2648, 2882
BstMCI	CGRYCG	1 cut(s)	55
BstNSI	RCATGY	4 cut(s)	514, 1864, 2466, 3022
BstPI	GGTNACC	1 cut(s)	2297
BstSFI	CTRYAG	4 cut(s)	1005, 1225, 1424, 2483
BstSLI	GKGCMC	1 cut(s)	495
BstSNI	TACGTA	1 cut(s)	1202
BstUI	CGCG	2 cut(s)	455, 2361
BstV1I	GCAGC	4 cut(s)	244, 808, 2018, 2933
BstV2I	GAAGAC	1 cut(s)	1786
BstXI	CCANNNNNNTGG	1 cut(s)	1345
BstZI	CGGCCG	1 cut(s)	52
Bsu15I	ATCGAT	1 cut(s)	1758
BsuI	GTATCC	1 cut(s)	3054
BsuTUI	ATCGAT	1 cut(s)	1758
BtgI	CCRYGG	6 cut(s)	533, 933, 993, 1590, 1705, 2359
BtgZI	GCGATG	2 cut(s)	1222, 2841
BtrI	CACGTC	1 cut(s)	2168
BtsCI	GGATG	7 cut(s)	44, 912, 1350, 1419, 2290, 2324, 2757
BtsI	GCAGTG	3 cut(s)	858, 2364, 3148
BveI	ACCTGC	2 cut(s)	840, 2585
Cac8I	GCNNGC	8 cut(s)	56, 85, 101, 1417, 2464, 2785, 2824, 3096
CciI	TCATGA	3 cut(s)	108, 1695, 2119
CfoI	GCGC	3 cut(s)	1906, 2011, 2153
Cfr10I	RCCGGY	3 cut(s)	54, 588, 2822
Cfr42I	CCGCGG	1 cut(s)	2362
Cfr9I	CCCGGG	1 cut(s)	120
ClaI	ATCGAT	1 cut(s)	1758
CseI	GACGC	7 cut(s)	208, 309, 829, 875, 1535, 2360, 2478
CsiI	ACCWGGT	1 cut(s)	2397
Csp6I	GTAC	8 cut(s)	240, 439, 617, 644, 1028, 1260, 1912, 3022
CspAI	ACCGGT	1 cut(s)	588
CviQI	GTAC	8 cut(s)	240, 439, 617, 644, 1028, 1260, 1912, 3022
DdeI	CTNAG	4 cut(s)	578, 1017, 1740, 2091
DinI	GGCGCC	1 cut(s)	2152
DraIII	CACNNNGTG	1 cut(s)	2401
DrdI	GACNNNNNNGTC	1 cut(s)	1511
DseDI	GACNNNNNNGTC	1 cut(s)	1511
EaeI	YGGCCR	7 cut(s)	52, 56, 996, 1347, 1364, 1927, 2137
EagI	CGGCCG	1 cut(s)	52
Eam1104I	CTCTTC	2 cut(s)	2885, 2996
EarI	CTCTTC	2 cut(s)	2885, 2996
Ecl136II	GAGCTC	1 cut(s)	354
EclXI	CGGCCG	1 cut(s)	52
Eco105I	TACGTA	1 cut(s)	1202
Eco130I	CCWWGG	9 cut(s)	228, 533, 993, 1058, 1332, 1590, 1668, 1818, 1898
Eco24I	GRGCYC	3 cut(s)	356, 495, 1458
Eco31I	GGTCTC	1 cut(s)	1401
Eco47I	GGWCC	5 cut(s)	1441, 1513, 1702, 2676, 2943
Eco52I	CGGCCG	1 cut(s)	52
Eco53kI	GAGCTC	1 cut(s)	354
Eco57I	CTGAAG	2 cut(s)	2010, 2980
Eco72I	CACGTG	1 cut(s)	1341
Eco88I	CYCGRG	1 cut(s)	120
Eco91I	GGTNACC	1 cut(s)	2297
EcoICRI	GAGCTC	1 cut(s)	354
EcoO109I	RGGNCCY	3 cut(s)	1441, 1513, 2943
EcoO65I	GGTNACC	1 cut(s)	2297
EcoT14I	CCWWGG	9 cut(s)	228, 533, 993, 1058, 1332, 1590, 1668, 1818, 1898
EcoT22I	ATGCAT	1 cut(s)	2455
EcoT38I	GRGCYC	3 cut(s)	356, 495, 1458
EgeI	GGCGCC	1 cut(s)	2152
EheI	GGCGCC	1 cut(s)	2152
ErhI	CCWWGG	9 cut(s)	228, 533, 993, 1058, 1332, 1590, 1668, 1818, 1898
Esp3I	CGTCTC	2 cut(s)	277, 1992
FauI	CCCGC	5 cut(s)	92, 238, 1902, 2776, 3079
FbaI	TGATCA	3 cut(s)	403, 1393, 2116
FblI	GTMKAC	1 cut(s)	1092
FokI	GGATG	7 cut(s)	31, 899, 1357, 1406, 2297, 2331, 2744
FriOI	GRGCYC	3 cut(s)	356, 495, 1458
FseI	GGCCGGCC	1 cut(s)	58
FspBI	CTAG	6 cut(s)	632, 725, 1487, 2015, 2159, 2442
GlaI	GCGC	3 cut(s)	1905, 2010, 2152
GsuI	CTGGAG	2 cut(s)	237, 1926
HaeII	RGCGCY	2 cut(s)	2012, 2154
HapII	CCGG	9 cut(s)	55, 88, 121, 203, 589, 819, 1367, 2679, 2823
HgaI	GACGC	7 cut(s)	208, 309, 829, 875, 1535, 2360, 2478
HhaI	GCGC	3 cut(s)	1906, 2011, 2153
Hin1I	GRCGYC	6 cut(s)	5, 92, 200, 840, 2151, 2470
Hin6I	GCGC	3 cut(s)	1904, 2009, 2151
HinP1I	GCGC	3 cut(s)	1904, 2009, 2151
HindIII	AAGCTT	1 cut(s)	1241
HpaII	CCGG	9 cut(s)	55, 88, 121, 203, 589, 819, 1367, 2679, 2823
Hpy166II	GTNNAC	3 cut(s)	858, 1093, 1504
Hpy8I	GTNNAC	3 cut(s)	858, 1093, 1504
Hpy99I	CGWCG	9 cut(s)	53, 97, 202, 291, 325, 845, 869, 1355, 2472
HpyCH4IV	ACGT	5 cut(s)	92, 437, 1201, 1340, 2167
HpyF3I	CTNAG	4 cut(s)	578, 1017, 1740, 2091
HpySE526I	ACGT	5 cut(s)	92, 437, 1201, 1340, 2167
Hsp92I	GRCGYC	6 cut(s)	5, 92, 200, 840, 2151, 2470
HspAI	GCGC	3 cut(s)	1904, 2009, 2151
KasI	GGCGCC	1 cut(s)	2150
KflI	GGGWCCC	1 cut(s)	1513
KpnI	GGTACC	1 cut(s)	1031
KroI	GCCGGC	2 cut(s)	54, 2822
KroNI	GCCGGC	2 cut(s)	56, 2824
Ksp22I	TGATCA	3 cut(s)	403, 1393, 2116
KspI	CCGCGG	1 cut(s)	2362
LmnI	GCTCC	3 cut(s)	1453, 1577, 1945
Lsp1109I	GCAGC	4 cut(s)	244, 808, 2018, 2933
LweI	GCATC	7 cut(s)	180, 453, 652, 1428, 1610, 2170, 2796
MabI	ACCWGGT	1 cut(s)	2397
MaeI	CTAG	6 cut(s)	632, 725, 1487, 2015, 2159, 2442
MaeII	ACGT	5 cut(s)	92, 437, 1201, 1340, 2167
MaeIII	GTNAC	8 cut(s)	889, 1073, 1646, 2275, 2290, 2297, 2348, 2905
MbiI	CCGCTC	2 cut(s)	99, 144
MboII	GAAGA	8 cut(s)	337, 1786, 2003, 2425, 2846, 2872, 2983, 2986
MhlI	GDGCHC	4 cut(s)	356, 495, 1458, 2743
MlsI	TGGCCA	1 cut(s)	1929
MluCI	AATT	5 cut(s)	77, 175, 2056, 2582, 2793
MluI	ACGCGT	1 cut(s)	453
MluNI	TGGCCA	1 cut(s)	1929
Mly113I	GGCGCC	1 cut(s)	2151
MlyI	GAGTC	3 cut(s)	473, 2760, 2982
MmeI	TCCRAC	2 cut(s)	1121, 2240
Mox20I	TGGCCA	1 cut(s)	1929
Mph1103I	ATGCAT	1 cut(s)	2455
MroNI	GCCGGC	2 cut(s)	54, 2822
MscI	TGGCCA	1 cut(s)	1929
MseI	TTAA	2 cut(s)	2807, 2897
MslI	CAYNNNNRTG	4 cut(s)	185, 1343, 1499, 2313
Msp20I	TGGCCA	1 cut(s)	1929
MspA1I	CMGCKG	3 cut(s)	2361, 2753, 2924
MspI	CCGG	9 cut(s)	55, 88, 121, 203, 589, 819, 1367, 2679, 2823
Mva1269I	GAATGC	4 cut(s)	1591, 2310, 2354, 2453
MvnI	CGCG	2 cut(s)	455, 2361
NaeI	GCCGGC	2 cut(s)	56, 2824
NarI	GGCGCC	1 cut(s)	2151
NciI	CCSGG	3 cut(s)	121, 122, 1368
NcoI	CCATGG	3 cut(s)	533, 993, 1590
NgoMIV	GCCGGC	2 cut(s)	54, 2822
NmeAIII	GCCGAG	2 cut(s)	306, 1024
NmuCI	GTSAC	5 cut(s)	889, 1646, 2275, 2290, 2348
NsiI	ATGCAT	1 cut(s)	2455
NspI	RCATGY	4 cut(s)	514, 1864, 2466, 3022
NspV	TTCGAA	1 cut(s)	1749
OliI	CACNNNNGTG	2 cut(s)	1499, 2313
PaeI	GCATGC	1 cut(s)	2466
PagI	TCATGA	3 cut(s)	108, 1695, 2119
PciI	ACATGT	1 cut(s)	3018
PcsI	WCGNNNNNNNCGW	2 cut(s)	849, 1755
PctI	GAATGC	4 cut(s)	1591, 2310, 2354, 2453
PdiI	GCCGGC	2 cut(s)	56, 2824
PfeI	GAWTC	8 cut(s)	604, 649, 745, 1063, 1636, 1746, 1967, 2075
Pfl23II	CGTACG	1 cut(s)	438
PinAI	ACCGGT	1 cut(s)	588
PleI	GAGTC	3 cut(s)	473, 2760, 2982
PluTI	GGCGCC	1 cut(s)	2154
PmaCI	CACGTG	1 cut(s)	1341
PmlI	CACGTG	1 cut(s)	1341
PpsI	GAGTC	3 cut(s)	473, 2760, 2982
Ppu21I	YACGTR	2 cut(s)	1202, 1341
PpuMI	RGGWCCY	3 cut(s)	1441, 1513, 2943
PscI	ACATGT	1 cut(s)	3018
PshBI	ATTAAT	1 cut(s)	2897
Psp124BI	GAGCTC	1 cut(s)	356
Psp5II	RGGWCCY	3 cut(s)	1441, 1513, 2943
PspCI	CACGTG	1 cut(s)	1341
PspEI	GGTNACC	1 cut(s)	2297
PspLI	CGTACG	1 cut(s)	438
PspOMI	GGGCCC	1 cut(s)	491
PspPPI	RGGWCCY	3 cut(s)	1441, 1513, 2943
PsrI	GAACNNNNNNTAC	2 cut(s)	1148, 1180
PvuII	CAGCTG	1 cut(s)	2924
RigI	GGCCGGCC	1 cut(s)	58
RsaI	GTAC	8 cut(s)	241, 440, 618, 645, 1029, 1261, 1913, 3023
RsaNI	GTAC	8 cut(s)	240, 439, 617, 644, 1028, 1260, 1912, 3022
RseI	CAYNNNNRTG	4 cut(s)	185, 1343, 1499, 2313
SacI	GAGCTC	1 cut(s)	356
SacII	CCGCGG	1 cut(s)	2362
SaqAI	TTAA	2 cut(s)	2807, 2897
ScaI	AGTACT	3 cut(s)	241, 618, 1261
SchI	GAGTC	3 cut(s)	473, 2760, 2982
SduI	GDGCHC	4 cut(s)	356, 495, 1458, 2743
SexAI	ACCWGGT	1 cut(s)	2397
SfaNI	GCATC	7 cut(s)	180, 453, 652, 1428, 1610, 2170, 2796
SfcI	CTRYAG	4 cut(s)	1005, 1225, 1424, 2483
SfoI	GGCGCC	1 cut(s)	2152
Sfr303I	CCGCGG	1 cut(s)	2362
SfuI	TTCGAA	1 cut(s)	1749
SgrBI	CCGCGG	1 cut(s)	2362
SinI	GGWCC	5 cut(s)	1441, 1513, 1702, 2676, 2943
SmaI	CCCGGG	1 cut(s)	122
SmiMI	CAYNNNNRTG	4 cut(s)	185, 1343, 1499, 2313
SmlI	CTYRAG	3 cut(s)	2061, 2474, 2690
SmoI	CTYRAG	3 cut(s)	2061, 2474, 2690
SnaBI	TACGTA	1 cut(s)	1202
SphI	GCATGC	1 cut(s)	2466
Sse9I	AATT	5 cut(s)	77, 175, 2056, 2582, 2793
SspDI	GGCGCC	1 cut(s)	2150
SspI	AATATT	2 cut(s)	375, 2895
SspMI	CTAG	6 cut(s)	632, 725, 1487, 2015, 2159, 2442
SstI	GAGCTC	1 cut(s)	356
StyI	CCWWGG	9 cut(s)	228, 533, 993, 1058, 1332, 1590, 1668, 1818, 1898
TaiI	ACGT	5 cut(s)	95, 440, 1204, 1343, 2170
TasI	AATT	5 cut(s)	77, 175, 2056, 2582, 2793
TatI	WGTACW	4 cut(s)	239, 616, 643, 1259
TfiI	GAWTC	8 cut(s)	604, 649, 745, 1063, 1636, 1746, 1967, 2075
Tru1I	TTAA	2 cut(s)	2807, 2897
Tru9I	TTAA	2 cut(s)	2807, 2897
TseFI	GTSAC	5 cut(s)	889, 1646, 2275, 2290, 2348
TseI	GCWGC	4 cut(s)	257, 796, 2006, 2921
Tsp45I	GTSAC	5 cut(s)	889, 1646, 2275, 2290, 2348
TspDTI	ATGAA	8 cut(s)	521, 758, 1598, 1684, 2136, 2575, 2872, 3047
TspGWI	ACGGA	4 cut(s)	37, 304, 1368, 2518
TspMI	CCCGGG	1 cut(s)	120
VpaK11BI	GGWCC	5 cut(s)	1441, 1513, 1702, 2676, 2943
VspI	ATTAAT	1 cut(s)	2897
XapI	RAATTY	3 cut(s)	77, 2056, 2793
XbaI	TCTAGA	1 cut(s)	2441
XceI	RCATGY	4 cut(s)	514, 1864, 2466, 3022
XcmI	CCANNNNNNNNNTGG	3 cut(s)	666, 1588, 2422
XmaI	CCCGGG	1 cut(s)	120
XmiI	GTMKAC	1 cut(s)	1092
XspI	CTAG	6 cut(s)	632, 725, 1487, 2015, 2159, 2442
ZraI	GACGTC	1 cut(s)	93
ZrmI	AGTACT	3 cut(s)	241, 618, 1261
Zsp2I	ATGCAT	1 cut(s)	2455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.