Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000880

Physical Location & Seq

Genomic Coordinates Reverse (-)

31372743 .. 31397473

Gene Structure 24731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0300000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

ATGAAGCGCAGGGTGTTGATGCTGTGCGGGGACTACATGGAAGATCAGGAGGCCATGGTCCCTTTTCAAGCGTTGCAGGCCTTTGGAGTTGCCGTCGATGCCGTCTGTCCCGGAAAGAAAGCCGGCGACATCTGCCGCACCGCCATTCATCAACTCTCTCCTTCTCACCAGACATATTCCGAATCACGTGGTCATAATTTTACACTCAATGCAACATTCGATGACGTTGAAGCTGACAATTATGATGGATTAATAATCCCAGGAGGGCGGGCTCCTGAATATCTTGCTATTGATGCATCAGTTGTAGATTTGGTGAAAAAGTTTACAGACTCCACAAAGGCAATTGCATCAATTTGCCATGGGCAATTGGTCCTAGCAGCTGCTGGCTCGCTTAAAGGTCGGAAGTGCACAGCATATCCTGCTGTGGGACCTGTACTTGTTGCTGCAGGTGCTCACTGGGTGGAACCAGAGACCATGGCTGCGTGTGTTGTTGATGGTAACATAATAACAGGGGCTACATATGAATGCCATCCTGAGTTCATTAGGGCTTTTGTGAAGGCACTAGGAGGCAACATAACTGGTCCAGATAGAAGAGTTCTGTTTCTCTGTGGAGACTTCATGGAAGATTATGAGGTAGCAGTGCCTTTTCAGTCGCTTCAAGCTCTAGGGTGCCATGTCGATGGAGCATGCCCCAAGAAGAAAGCTGGTGATATCTGCGCAACTGCTGTCCATGATTTTGAAGGTGATCAAACCTACAGTGAGAAGCCAGGACATAATTTTACTTTAACAGCTGATTTTGAAGGTATAGATGCCTCCAGTTATGATGCTCTTGTAATCCCTGGCGGTCGGGCTCCAGAATATTTGGCACTAGATAAGAAAGTTATTGAACTAGTGAAACAAATTATGGAAGCCAAGAAACCAGTTGCATCGATCTGCCATGGGCAACAGATTCTAGCTGCTGCTGGCGTTCTACAGGGAAGGAATTGCACTGCATACCCTGCGGTGAAGCTTAATGTGATTTTGTCAGGAGCAACATGGCTTGAACCCAATCCAATACATCGTTGCTTCACTGATGGGAATTTGGTGACTGGAGCGGCTTGGCCAGGCCACCCGGAGTTCATCTCGCAATTGATGGAATTGCTGGATGTTGGAGTATCATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0008152 GO:0009846 GO:0009856 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0022414 GO:0032501 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0051704 GO:0051753 GO:0070085 GO:0071554 GO:0071669 GO:0097502

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

387

Amino Acids

41.39

Weight (kDa)

5.28

Isoelectric Point (pI)

42.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DJ-1_PfpI	PF01965	3 - 186	1.5e-46	DJ-1/PfpI family
DJ-1_PfpI	PF01965	197 - 379	2.2e-47	DJ-1/PfpI family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04730 AT1G04730 AT1G04730 AT1G04730
fragaria_vesca	FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330 FvH4_4g00330
malus_domestica	MD09G1000200.v1.1
prunus_persica	Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1 Prupe.3G316000_v2.0.a1
pyrus_communis	pycom111g00010
rosa_chinensis	RchiOBHm_Chr4g0385211
rosa_laevigata	RLG00000010248
rosa_multiflora	Rmu_sc0003086.1_g000001 Rmu_sc0008734.1_g000010
rosa_roxburghii	Rroxscaffold_5G00333110
rosa_rugosa	Rorug03G0300000
rosa_samantha	Rh4AG003300 Rh4BG002700 Rh4CG003800 Rh4DG003000
rosa_wichuraiana	Rw4G000570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	437
Acc16I	TGCGCA	1 cut(s)	718
Acc36I	ACCTGC	1 cut(s)	437
AccB1I	GGYRCC	1 cut(s)	669
AccBSI	CCGCTC	1 cut(s)	1094
AciI	CCGC	7 cut(s)	27, 136, 141, 268, 843, 1001, 1094
AcoI	YGGCCR	1 cut(s)	1100
AcsI	RAATTY	1 cut(s)	1078
AcvI	CACGTG	1 cut(s)	188
AdeI	CACNNNGTG	1 cut(s)	460
AfaI	GTAC	1 cut(s)	435
AfiI	CCNNNNNNNGG	1 cut(s)	425
AgsI	TTSAA	7 cut(s)	68, 230, 659, 740, 800, 887, 1043
AhlI	ACTAGT	1 cut(s)	889
AjnI	CCWGG	4 cut(s)	259, 766, 838, 1102
AluBI	AGCT	7 cut(s)	233, 380, 662, 704, 791, 956, 1009
AluI	AGCT	7 cut(s)	233, 380, 662, 704, 791, 956, 1009
Alw21I	GWGCWC	2 cut(s)	410, 454
Alw26I	GTCTC	2 cut(s)	464, 606
Alw44I	GTGCAC	1 cut(s)	406
AlwNI	CAGNNNCTG	1 cut(s)	383
AoxI	GGCC	4 cut(s)	51, 78, 1100, 1105
ApaLI	GTGCAC	1 cut(s)	406
ApeKI	GCWGC	6 cut(s)	377, 380, 443, 479, 956, 959
ApoI	RAATTY	1 cut(s)	1078
AseI	ATTAAT	1 cut(s)	251
AspLEI	GCGC	2 cut(s)	9, 719
AspS9I	GGNCC	4 cut(s)	58, 370, 428, 581
AsuC2I	CCSGG	2 cut(s)	111, 1112
AsuHPI	GGTGA	6 cut(s)	158, 325, 719, 755, 1015, 1096
AvaII	GGWCC	4 cut(s)	58, 370, 428, 581
BaeGI	GKGCMC	1 cut(s)	410
BalI	TGGCCA	1 cut(s)	1102
BanI	GGYRCC	1 cut(s)	669
BanII	GRGCYC	2 cut(s)	274, 853
BbrPI	CACGTG	1 cut(s)	188
Bbv12I	GWGCWC	2 cut(s)	410, 454
BbvI	GCAGC	6 cut(s)	367, 389, 430, 466, 943, 946
BccI	CCATC	6 cut(s)	239, 488, 537, 674, 1067, 1126
BceAI	ACGGC	2 cut(s)	77, 86
BciT130I	CCWGG	4 cut(s)	261, 768, 840, 1104
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	2 cut(s)	111, 1112
BcoDI	GTCTC	2 cut(s)	464, 606
BcuI	ACTAGT	1 cut(s)	889
BfaI	CTAG	6 cut(s)	374, 563, 665, 869, 890, 953
BfmI	CTRYAG	3 cut(s)	444, 754, 971
BfuAI	ACCTGC	1 cut(s)	437
BisI	GCNGC	8 cut(s)	136, 378, 381, 444, 480, 957, 960, 1095
BlsI	GCNGC	8 cut(s)	137, 379, 382, 445, 481, 958, 961, 1096
Bme1390I	CCNGG	6 cut(s)	111, 261, 768, 840, 1104, 1112
Bme18I	GGWCC	4 cut(s)	58, 370, 428, 581
BmgT120I	GGNCC	4 cut(s)	58, 370, 428, 581
BmiI	GGNNCC	6 cut(s)	60, 273, 429, 465, 671, 852
BmrFI	CCNGG	6 cut(s)	111, 261, 768, 840, 1104, 1112
BmrI	ACTGGG	1 cut(s)	466
BmsI	GCATC	8 cut(s)	9, 88, 283, 305, 356, 799, 814, 935
BmuI	ACTGGG	1 cut(s)	466
BplI	GAGNNNNNCTC	2 cut(s)	1106, 1138
BpmI	CTGGAG	3 cut(s)	799, 837, 1110
BpuMI	CCSGG	2 cut(s)	111, 1112
Bsa29I	ATCGAT	1 cut(s)	929
BsaAI	YACGTR	1 cut(s)	188
BsaI	GGTCTC	1 cut(s)	464
BsaJI	CCNNGG	6 cut(s)	54, 259, 358, 474, 838, 937
BsaXI	ACNNNNNCTCC	2 cut(s)	78, 108
Bsc4I	CCNNNNNNNGG	1 cut(s)	425
Bse118I	RCCGGY	1 cut(s)	122
Bse1I	ACTGG	5 cut(s)	461, 583, 816, 920, 1093
BseBI	CCWGG	4 cut(s)	261, 768, 840, 1104
BseCI	ATCGAT	1 cut(s)	929
BseDI	CCNNGG	6 cut(s)	54, 259, 358, 474, 838, 937
BseGI	GGATG	2 cut(s)	529, 1150
BseLI	CCNNNNNNNGG	1 cut(s)	425
BseMII	CTCAG	1 cut(s)	525
BseNI	ACTGG	5 cut(s)	461, 583, 816, 920, 1093
BseSI	GKGCMC	1 cut(s)	410
BseXI	GCAGC	6 cut(s)	367, 389, 430, 466, 943, 946
Bsh1285I	CGRYCG	1 cut(s)	847
BshFI	GGCC	4 cut(s)	53, 80, 1102, 1107
BshNI	GGYRCC	1 cut(s)	669
BshVI	ATCGAT	1 cut(s)	929
BsiEI	CGRYCG	1 cut(s)	847
BsiHKAI	GWGCWC	2 cut(s)	410, 454
BsiSI	CCGG	3 cut(s)	111, 123, 1112
BslFI	GGGAC	4 cut(s)	44, 44, 93, 441
BslI	CCNNNNNNNGG	1 cut(s)	425
BsmAI	GTCTC	2 cut(s)	464, 606
BsmFI	GGGAC	4 cut(s)	44, 44, 93, 441
BsmI	GAATGC	1 cut(s)	530
BsnI	GGCC	4 cut(s)	53, 80, 1102, 1107
Bso31I	GGTCTC	1 cut(s)	464
Bsp1286I	GDGCHC	4 cut(s)	274, 410, 454, 853
Bsp143I	GATC	3 cut(s)	43, 745, 930
Bsp19I	CCATGG	4 cut(s)	54, 358, 474, 937
BspACI	CCGC	7 cut(s)	27, 136, 141, 268, 843, 1001, 1094
BspANI	GGCC	4 cut(s)	53, 80, 1102, 1107
BspCNI	CTCAG	1 cut(s)	526
BspDI	ATCGAT	1 cut(s)	929
BspLI	GGNNCC	6 cut(s)	60, 273, 429, 465, 671, 852
BspMAI	CTGCAG	1 cut(s)	448
BspMI	ACCTGC	1 cut(s)	437
BspT107I	GGYRCC	1 cut(s)	669
BspTNI	GGTCTC	1 cut(s)	464
BsrBI	CCGCTC	1 cut(s)	1094
BsrFI	RCCGGY	1 cut(s)	122
BsrI	ACTGG	5 cut(s)	461, 583, 816, 920, 1093
BssAI	RCCGGY	1 cut(s)	122
BssECI	CCNNGG	6 cut(s)	54, 259, 358, 474, 838, 937
BssMI	GATC	3 cut(s)	43, 745, 930
BssT1I	CCWWGG	4 cut(s)	54, 358, 474, 937
Bst2UI	CCWGG	4 cut(s)	261, 768, 840, 1104
Bst4CI	ACNGT	1 cut(s)	758
Bst6I	CTCTTC	1 cut(s)	586
BstAPI	GCANNNNNTGC	2 cut(s)	419, 998
BstBAI	YACGTR	1 cut(s)	188
BstC8I	GCNNGC	7 cut(s)	78, 124, 270, 385, 389, 688, 964
BstDEI	CTNAG	1 cut(s)	534
BstDSI	CCRYGG	4 cut(s)	54, 358, 474, 937
BstF5I	GGATG	2 cut(s)	529, 1150
BstHHI	GCGC	2 cut(s)	9, 719
BstKTI	GATC	3 cut(s)	46, 748, 933
BstMAI	GTCTC	2 cut(s)	464, 606
BstMBI	GATC	3 cut(s)	43, 745, 930
BstMCI	CGRYCG	1 cut(s)	847
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 98, 132, 293, 419, 449, 998
BstNI	CCWGG	4 cut(s)	261, 768, 840, 1104
BstNSI	RCATGY	1 cut(s)	690
BstSCI	CCNGG	6 cut(s)	109, 259, 766, 838, 1102, 1110
BstSFI	CTRYAG	3 cut(s)	444, 754, 971
BstSLI	GKGCMC	1 cut(s)	410
BstV1I	GCAGC	6 cut(s)	367, 389, 430, 466, 943, 946
BstXI	CCANNNNNNTGG	1 cut(s)	680
Bsu15I	ATCGAT	1 cut(s)	929
BsuRI	GGCC	4 cut(s)	53, 80, 1102, 1107
BsuTUI	ATCGAT	1 cut(s)	929
BtgI	CCRYGG	4 cut(s)	54, 358, 474, 937
BtsCI	GGATG	2 cut(s)	529, 1150
BtsI	GCAGTG	2 cut(s)	645, 987
BtsIMutI	CAGTG	5 cut(s)	454, 645, 763, 987, 1068
BveI	ACCTGC	1 cut(s)	437
Cac8I	GCNNGC	7 cut(s)	78, 124, 270, 385, 389, 688, 964
CaiI	CAGNNNCTG	1 cut(s)	383
CfoI	GCGC	2 cut(s)	9, 719
Cfr10I	RCCGGY	1 cut(s)	122
Cfr13I	GGNCC	4 cut(s)	58, 370, 428, 581
ClaI	ATCGAT	1 cut(s)	929
Csp6I	GTAC	1 cut(s)	434
CviQI	GTAC	1 cut(s)	434
DdeI	CTNAG	1 cut(s)	534
DpnI	GATC	3 cut(s)	45, 747, 932
DpnII	GATC	3 cut(s)	43, 745, 930
DraIII	CACNNNGTG	1 cut(s)	460
EaeI	YGGCCR	1 cut(s)	1100
Eam1104I	CTCTTC	1 cut(s)	586
EarI	CTCTTC	1 cut(s)	586
Eco130I	CCWWGG	4 cut(s)	54, 358, 474, 937
Eco147I	AGGCCT	1 cut(s)	80
Eco24I	GRGCYC	2 cut(s)	274, 853
Eco31I	GGTCTC	1 cut(s)	464
Eco32I	GATATC	1 cut(s)	712
Eco47I	GGWCC	4 cut(s)	58, 370, 428, 581
Eco72I	CACGTG	1 cut(s)	188
EcoO109I	RGGNCCY	1 cut(s)	428
EcoRII	CCWGG	4 cut(s)	259, 766, 838, 1102
EcoRV	GATATC	1 cut(s)	712
EcoT14I	CCWWGG	4 cut(s)	54, 358, 474, 937
EcoT22I	ATGCAT	1 cut(s)	298
EcoT38I	GRGCYC	2 cut(s)	274, 853
ErhI	CCWWGG	4 cut(s)	54, 358, 474, 937
FaqI	GGGAC	4 cut(s)	44, 44, 93, 441
FauI	CCCGC	2 cut(s)	20, 261
FauNDI	CATATG	1 cut(s)	520
FbaI	TGATCA	1 cut(s)	745
Fnu4HI	GCNGC	8 cut(s)	136, 378, 381, 444, 480, 957, 960, 1095
FokI	GGATG	2 cut(s)	516, 1157
FriOI	GRGCYC	2 cut(s)	274, 853
Fsp4HI	GCNGC	8 cut(s)	136, 378, 381, 444, 480, 957, 960, 1095
FspBI	CTAG	6 cut(s)	374, 563, 665, 869, 890, 953
FspI	TGCGCA	1 cut(s)	718
GlaI	GCGC	2 cut(s)	8, 718
GluI	GCNGC	8 cut(s)	136, 378, 381, 444, 480, 957, 960, 1095
GsuI	CTGGAG	3 cut(s)	799, 837, 1110
HaeIII	GGCC	4 cut(s)	53, 80, 1102, 1107
HapII	CCGG	3 cut(s)	111, 123, 1112
HhaI	GCGC	2 cut(s)	9, 719
Hin6I	GCGC	2 cut(s)	7, 717
HinP1I	GCGC	2 cut(s)	7, 717
HindIII	AAGCTT	1 cut(s)	1007
HinfI	GANTC	3 cut(s)	182, 329, 949
HpaII	CCGG	3 cut(s)	111, 123, 1112
HphI	GGTGA	6 cut(s)	158, 325, 719, 755, 1015, 1096
Hpy166II	GTNNAC	2 cut(s)	324, 408
Hpy188I	TCNGA	2 cut(s)	181, 402
Hpy188III	TCNNGA	6 cut(s)	47, 275, 533, 584, 854, 1026
Hpy8I	GTNNAC	2 cut(s)	324, 408
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	5 cut(s)	171, 550, 734, 794, 972
HpyCH4III	ACNGT	1 cut(s)	758
HpyCH4IV	ACGT	2 cut(s)	187, 225
HpyCH4V	TGCA	9 cut(s)	76, 212, 296, 347, 408, 446, 926, 987, 992
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 98, 132, 293, 419, 449, 998
HpyF3I	CTNAG	1 cut(s)	534
HpySE526I	ACGT	2 cut(s)	187, 225
HspAI	GCGC	2 cut(s)	7, 717
KroI	GCCGGC	1 cut(s)	122
KroNI	GCCGGC	1 cut(s)	124
Ksp22I	TGATCA	1 cut(s)	745
Kzo9I	GATC	3 cut(s)	43, 745, 930
LmnI	GCTCC	5 cut(s)	277, 683, 856, 1028, 1091
Lsp1109I	GCAGC	6 cut(s)	367, 389, 430, 466, 943, 946
LweI	GCATC	8 cut(s)	9, 88, 283, 305, 356, 799, 814, 935
MaeI	CTAG	6 cut(s)	374, 563, 665, 869, 890, 953
MaeII	ACGT	2 cut(s)	187, 225
MaeIII	GTNAC	2 cut(s)	497, 1084
MalI	GATC	3 cut(s)	45, 747, 932
MbiI	CCGCTC	1 cut(s)	1094
MboI	GATC	3 cut(s)	43, 745, 930
MboII	GAAGA	4 cut(s)	53, 603, 635, 709
MfeI	CAATTG	3 cut(s)	342, 365, 1127
MhlI	GDGCHC	4 cut(s)	274, 410, 454, 853
MlsI	TGGCCA	1 cut(s)	1102
MluNI	TGGCCA	1 cut(s)	1102
MlyI	GAGTC	1 cut(s)	323
MmeI	TCCRAC	2 cut(s)	380, 1129
MnlI	CCTC	5 cut(s)	43, 257, 560, 625, 823
Mox20I	TGGCCA	1 cut(s)	1102
Mph1103I	ATGCAT	1 cut(s)	298
MroNI	GCCGGC	1 cut(s)	122
MscI	TGGCCA	1 cut(s)	1102
MseI	TTAA	4 cut(s)	251, 393, 785, 1011
MslI	CAYNNNNRTG	2 cut(s)	523, 678
Msp20I	TGGCCA	1 cut(s)	1102
MspA1I	CMGCKG	2 cut(s)	380, 791
MspI	CCGG	3 cut(s)	111, 123, 1112
MspR9I	CCNGG	6 cut(s)	111, 261, 768, 840, 1104, 1112
MunI	CAATTG	3 cut(s)	342, 365, 1127
Mva1269I	GAATGC	1 cut(s)	530
MvaI	CCWGG	4 cut(s)	261, 768, 840, 1104
MwoI	GCNNNNNNNGC	7 cut(s)	77, 98, 132, 293, 419, 449, 998
NaeI	GCCGGC	1 cut(s)	124
NciI	CCSGG	2 cut(s)	111, 1112
NcoI	CCATGG	4 cut(s)	54, 358, 474, 937
NdeI	CATATG	1 cut(s)	520
NdeII	GATC	3 cut(s)	43, 745, 930
NgoMIV	GCCGGC	1 cut(s)	122
NlaIV	GGNNCC	6 cut(s)	60, 273, 429, 465, 671, 852
NmuCI	GTSAC	1 cut(s)	1084
NsbI	TGCGCA	1 cut(s)	718
NsiI	ATGCAT	1 cut(s)	298
NspI	RCATGY	1 cut(s)	690
PaeI	GCATGC	1 cut(s)	690
PaqCI	CACCTGC	1 cut(s)	437
PceI	AGGCCT	1 cut(s)	80
PctI	GAATGC	1 cut(s)	530
PdiI	GCCGGC	1 cut(s)	124
PfeI	GAWTC	2 cut(s)	182, 949
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	8 cut(s)	137, 379, 382, 445, 481, 958, 961, 1096
PleI	GAGTC	1 cut(s)	323
PmaCI	CACGTG	1 cut(s)	188
PmlI	CACGTG	1 cut(s)	188
PpsI	GAGTC	1 cut(s)	323
Ppu21I	YACGTR	1 cut(s)	188
PpuMI	RGGWCCY	1 cut(s)	428
PshBI	ATTAAT	1 cut(s)	251
Psp5II	RGGWCCY	1 cut(s)	428
Psp6I	CCWGG	4 cut(s)	259, 766, 838, 1102
PspCI	CACGTG	1 cut(s)	188
PspGI	CCWGG	4 cut(s)	259, 766, 838, 1102
PspN4I	GGNNCC	6 cut(s)	60, 273, 429, 465, 671, 852
PspPI	GGNCC	4 cut(s)	58, 370, 428, 581
PspPPI	RGGWCCY	1 cut(s)	428
PstI	CTGCAG	1 cut(s)	448
PstNI	CAGNNNCTG	1 cut(s)	383
PvuII	CAGCTG	2 cut(s)	380, 791
RsaI	GTAC	1 cut(s)	435
RsaNI	GTAC	1 cut(s)	434
RseI	CAYNNNNRTG	2 cut(s)	523, 678
SaqAI	TTAA	4 cut(s)	251, 393, 785, 1011
SatI	GCNGC	8 cut(s)	136, 378, 381, 444, 480, 957, 960, 1095
Sau3AI	GATC	3 cut(s)	43, 745, 930
Sau96I	GGNCC	4 cut(s)	58, 370, 428, 581
SchI	GAGTC	1 cut(s)	323
ScrFI	CCNGG	6 cut(s)	111, 261, 768, 840, 1104, 1112
SduI	GDGCHC	4 cut(s)	274, 410, 454, 853
SfaNI	GCATC	8 cut(s)	9, 88, 283, 305, 356, 799, 814, 935
SfcI	CTRYAG	3 cut(s)	444, 754, 971
SinI	GGWCC	4 cut(s)	58, 370, 428, 581
SmiMI	CAYNNNNRTG	2 cut(s)	523, 678
SpeI	ACTAGT	1 cut(s)	889
SphI	GCATGC	1 cut(s)	690
SseBI	AGGCCT	1 cut(s)	80
SsiI	CCGC	7 cut(s)	27, 136, 141, 268, 843, 1001, 1094
SspI	AATATT	1 cut(s)	860
SspMI	CTAG	6 cut(s)	374, 563, 665, 869, 890, 953
StuI	AGGCCT	1 cut(s)	80
StyD4I	CCNGG	6 cut(s)	109, 259, 766, 838, 1102, 1110
StyI	CCWWGG	4 cut(s)	54, 358, 474, 937
TaaI	ACNGT	1 cut(s)	758
TaiI	ACGT	2 cut(s)	190, 228
TaqI	TCGA	4 cut(s)	96, 219, 678, 929
TatI	WGTACW	1 cut(s)	433
TauI	GCSGC	2 cut(s)	138, 1097
TfiI	GAWTC	2 cut(s)	182, 949
Tru1I	TTAA	4 cut(s)	251, 393, 785, 1011
Tru9I	TTAA	4 cut(s)	251, 393, 785, 1011
TscAI	CASTG	5 cut(s)	461, 645, 763, 994, 1075
TseFI	GTSAC	1 cut(s)	1084
TseI	GCWGC	6 cut(s)	377, 380, 443, 479, 956, 959
Tsp45I	GTSAC	1 cut(s)	1084
TspDTI	ATGAA	6 cut(s)	17, 137, 529, 537, 607, 1108
TspRI	CASTG	5 cut(s)	461, 645, 763, 994, 1075
VneI	GTGCAC	1 cut(s)	406
VpaK11BI	GGWCC	4 cut(s)	58, 370, 428, 581
VspI	ATTAAT	1 cut(s)	251
XapI	RAATTY	1 cut(s)	1078
XceI	RCATGY	1 cut(s)	690
XspI	CTAG	6 cut(s)	374, 563, 665, 869, 890, 953
Zsp2I	ATGCAT	1 cut(s)	298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.