FvH4_4g00330

chromosome transmission fidelity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000880
Physical Location & Seq
Forward (+)
318634 .. 330892
12259 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00330.t15

Sequence Viewer

Length: 2841 bp
ATGGAGATGGAGATGAACATGGACGAACTTGAATTGCTCGAAGCCAACTATCGCCTCTACGAACAAGATTGCACGGAGGAGCACGAACCGCCGGAACCCTATCCAGAACAAGAACAAGACCAACTTCCCACGGCTCCCAGATCGCCACCGTCTACCGAGACCCAAATCAACGGCCAGAAGCGTTTGCGACCAGTAGACGAAGCTGCCGAAGCTCCTGCTCCACAACGGAGCAGGATCGAAGATGAGGACTGGCTTCGTTACTCGCCGCCGCCGCCGCCGCACCAGAGCGATCCTATTATTGTTGAAAAAACAAGCGCTCCGGAGAAGCTCGTGTCTAGGTATGCCTCGGAGATCGACGGCGATTTCATTCCTGTGACGGCGCCGGGTTTGGGCGACAGGGTTTATGCCAAGATTTCTAGGGTGGAGATGGAACAGCCTCTACATAGAGGACGATCTCAATCTGCTGCAGGTCTCATTTCGGAACCGATTCATGTTCTAATGCAAAGAATAGAGCAAGACGCGTTTACAAAGGCCTTGCAAGCCAGTTCTAGAGATCAAAGTGATGTAATTCTTCCCGAAACACCAGTTGTGCATGAACGACTTTGGGTGGATAAATATGCTCCACACTCATTTACTGAGCTTCTCAGCGATGAACAGACAAATCGTGAGGTCCTGCTTTGGCTAAAACAATGGGATTCCTGTGTTTTTGGATCAGAGATTAGGAGCACAACAGATGAGGTTATGTCTGCTTTAAAACGACACAAACTTCCCGAGTCAAAGTTTCCAAGAAGTAACAGAGGATGTAGATGGAATAATGAAAAATTTAAGCACGTGCATGTCAATGCAATGAATCATGAAAATACTAATTCGAAAAGCGTTCAAGATTTGTCAAACAAGTCCCGGTCTACTGGTCCGCCAGAACACAAGATCCTTCTACTATGTGGCCCACCAGGGCTTGGAAAGACTACACTCGCACATGTAGCTGCAAAGCATTGTGGATACCGAGTGGTGGAGGTGAATGCTAGTGATGAACGATCATCATCAACTATTGGAGCTAAAATTCTTGATGTTGTTCAAATGAACTCAGTCTCAGCCAACTCGAGGCCAAAGTGTTTGGTGATTGACGAAATAGATGGGGCACTTGGTGATGGAAAAGGTGCAGTTGAAGTTATTCTAAAAATGGTTTCTGCTGATAAGAAGTCTGATATGGAGAAGGAAAAGGTTGATAGAGAACAGACATCAGGAAAGGCATCTTCAAAAAAGGGGCGGAAATCTGCAGTGTTGACTAGACCAATAATTTGCATATGTAATGACCTATACACACCTTCATTGAGACCGTTACGTCAGATAGCGAAGGTTCATGTATTTGTTCAACCAACAGTCAATCGAGTGGTGAGCAGGCTTAAATATATATGTAACAAGGAAGGAATGAAAACAAGTTCCATTGCACTTACTGTACTTGCAGAGCATACAGAATGTGATATACGTTCATGCTTGAACACTCTTCAGTTCCTGAACAAGAGGAAGGAAGCACTCAACGCTTTGGATATTGGCTCTCAAGTGGTTGGTCGAAAGGATATGTCAGTAGGTGTGTTTGATGTCTGGAAAGAGATCTTCCAAAAGAGAAAACCAAAGAGGCAGCAAAGAACAGATACCGGTTGTGGAACAATGTCAAATGAATTCGACTCTTTGTATTCTCTCATTTCTCACCGTGGTGACTATGATTTGATTGTGGATGGTCTTCATGAAAACATTTTGCATCTCCCTTATCATGATCCAGTTATGCAAAAGACTGTCAAATGCTTGAATAGTCTTGGTGTCTCCGACCTTATGAACAAATATATTATGCGTACGCAACACATGACCCTTTATGCTTATCAGCCTGTTATTGCCATCATTGTACATCGTTTAGTAGCCCAAGTGCAGAGACCAAATATTGAGTGGCCAAAATCGTATTATAGGTACCGGACAATGTTAATGGAAAAAGTGGACAGTTTGAGGTCTTGGTACAACACAATTCCACCATCTATTTCAAGGCATTTGTCAATTAAGTCCTTTGTAGAAGACTCAATTTCATTGCTGTTACACATCCTATCACCCCCATCTTTAAGGCTGGCCGCATTGCACTTACTCTCAGAGAAGGAGAAGAATGATTTGGCTCAGTTAGTTGGCACGATGGTCTCCTATTCTATAACACATAGAAGAATCAAATCTGATGCTTTGCCTGGCAATCTCGGATATCAAGCAGCTGATGTGTCAGAGCTATCTTTTGATCCCCCCATTAATAGCTTCATTAACTTCCAGGGCTACAGATCTGGACATCATGTACTTGCTTCAACTATGAAACAGATGTTGGCGCACGAGGTTGAAAAGCAAAGGATTGTGCAAGCAAGCATTGGGAGATCTGAACAGTTGACAGGTGGATACAAGAAGGAAAATGATGCTTCTTTAGGGCTAGAAACTAGGAAACTACAGTCTAGTAGAGCTGATCATTTAGGTGCATCTGCTACGAACAATGGAAAGTCAGAAAGCATGTCGAATAGGACACAATCAAATCCCAGCACATCTGGTGTTTTACCCAACTTGGGGGGCACCGGGAGTAACCCAGCGATCACAAAATTAGACTCTTCTGGATGTATGAGAAAGTCATCTAGTGGTTCCTCTAGTTTCTTTGATAGGTTTAGAAAGCTTGGTAAAGGTTCTCAGAATACTGCTGACGCTGTGCGGAAGGAAGCAACTTCTGTGAGAGATTCACGTCCTTTGGTCTTTAAATTTAACGAGGGCTTTACAAATGCAGTAAAAAGGCCCGTTCGTGTTCGGGAATTTCTGACGTCTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

947

Amino Acids

106.07

Weight (kDa)

8.83

Isoelectric Point (pI)

52.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 311 - 397 5.6e-14 ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1 PF25361 462 - 513 7.7e-08 RFC1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1341
AatII GACGTC 1 cut(s) 2834
Acc36I ACCTGC 1 cut(s) 458
Acc65I GGTACC 1 cut(s) 1962
AccB1I GGYRCC 3 cut(s) 379, 1962, 2591
AccB7I CCANNNNNTGG 1 cut(s) 956
AccI GTMKAC 3 cut(s) 152, 195, 905
AccII CGCG 1 cut(s) 521
AccIII TCCGGA 1 cut(s) 319
AclWI GGATC 6 cut(s) 242, 284, 718, 922, 1769, 2267
AcoI YGGCCR 3 cut(s) 172, 1943, 2115
AcsI RAATTY 5 cut(s) 821, 1059, 1679, 2771, 2822
AcuI CTGAAG 1 cut(s) 1490
AcvI CACGTG 1 cut(s) 832
AcyI GRCGYC 2 cut(s) 380, 2831
AdeI CACNNNGTG 1 cut(s) 1145
AfaI GTAC 6 cut(s) 1458, 1852, 1902, 1964, 2009, 2328
AfeI AGCGCT 1 cut(s) 316
AfiI CCNNNNNNNGG 6 cut(s) 389, 956, 1009, 1101, 2585, 2586
AflIII ACRYGT 2 cut(s) 519, 976
AgeI ACCGGT 1 cut(s) 1655
AjiI CACGTC 1 cut(s) 2756
AjnI CCWGG 3 cut(s) 949, 2224, 2301
AjuI GAANNNNNNNTTGG 4 cut(s) 2138, 2170, 2336, 2368
AleI CACNNNNGTG 1 cut(s) 1713
AloI GAACNNNNNNTCC 2 cut(s) 912, 944
Alw21I GWGCWC 2 cut(s) 84, 728
Alw26I GTCTC 7 cut(s) 152, 476, 1093, 1327, 1825, 1921, 2185
AlwI GGATC 6 cut(s) 242, 284, 718, 922, 1769, 2267
AlwNI CAGNNNCTG 1 cut(s) 1513
Ama87I CYCGRG 2 cut(s) 770, 1099
Aor13HI TCCGGA 1 cut(s) 319
Aor51HI AGCGCT 1 cut(s) 316
AoxI GGCC 7 cut(s) 172, 531, 943, 1103, 1943, 2115, 2804
ApeKI GCWGC 5 cut(s) 203, 464, 983, 1639, 2246
ApoI RAATTY 5 cut(s) 821, 1059, 1679, 2771, 2822
ArsI GACNNNNNNTTYG 2 cut(s) 1281, 1313
AseI ATTAAT 1 cut(s) 2283
AsiGI ACCGGT 1 cut(s) 1655
Asp700I GAANNNNTTC 2 cut(s) 486, 1170
Asp718I GGTACC 1 cut(s) 1962
AspLEI GCGC 3 cut(s) 317, 382, 2359
AspS9I GGNCC 4 cut(s) 670, 911, 944, 2805
AsuC2I CCSGG 3 cut(s) 384, 901, 2596
AsuHPI GGTGA 7 cut(s) 1027, 1129, 1157, 1405, 1700, 1727, 2088
AsuII TTCGAA 1 cut(s) 869
AvaI CYCGRG 2 cut(s) 770, 1099
AvaII GGWCC 2 cut(s) 670, 911
BaeGI GKGCMC 2 cut(s) 1141, 2594
BalI TGGCCA 1 cut(s) 1945
BanI GGYRCC 3 cut(s) 379, 1962, 2591
BauI CACGAG 2 cut(s) 329, 2360
BbrPI CACGTG 1 cut(s) 832
BbsI GAAGAC 2 cut(s) 1733, 2070
Bbv12I GWGCWC 2 cut(s) 84, 728
BbvI GCAGC 5 cut(s) 190, 451, 970, 1651, 2258
BccI CCATC 9 cut(s) 421, 801, 1127, 1142, 1730, 1901, 2032, 2110, 2170
BceAI ACGGC 4 cut(s) 147, 187, 373, 393
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciT130I CCWGG 3 cut(s) 951, 2226, 2303
BciVI GTATCC 2 cut(s) 992, 2417
BclI TGATCA 1 cut(s) 2488
BcnI CCSGG 3 cut(s) 384, 901, 2596
BcoDI GTCTC 7 cut(s) 152, 476, 1093, 1327, 1825, 1921, 2185
BfmI CTRYAG 4 cut(s) 465, 1275, 2308, 2471
BfoI RGCGCY 2 cut(s) 318, 383
BfuAI ACCTGC 1 cut(s) 458
BfuI GTATCC 2 cut(s) 992, 2417
BglII AGATCT 3 cut(s) 1611, 2312, 2402
Bme1390I CCNGG 6 cut(s) 384, 901, 951, 2226, 2303, 2596
Bme18I GGWCC 2 cut(s) 670, 911
BmeT110I CYCGRG 2 cut(s) 770, 1099
BmgBI CACGTC 1 cut(s) 2756
BmgT120I GGNCC 4 cut(s) 670, 911, 944, 2805
BmiI GGNNCC 7 cut(s) 96, 135, 381, 483, 1964, 2593, 2659
BmrFI CCNGG 6 cut(s) 384, 901, 951, 2226, 2303, 2596
BmsI GCATC 5 cut(s) 1259, 1768, 2206, 2431, 2510
BpiI GAAGAC 2 cut(s) 1733, 2070
Bpu14I TTCGAA 1 cut(s) 869
BpuEI CTTGAG 1 cut(s) 1542
BpuMI CCSGG 3 cut(s) 384, 901, 2596
BsaAI YACGTR 1 cut(s) 832
BsaBI GATNNNNATC 2 cut(s) 457, 1039
BsaHI GRCGYC 2 cut(s) 380, 2831
BsaI GGTCTC 5 cut(s) 152, 476, 1327, 1921, 2185
BsaJI CCNNGG 5 cut(s) 129, 345, 950, 1711, 2302
BsaWI WCCGGW 3 cut(s) 319, 1655, 1965
BsaXI ACNNNNNCTCC 2 cut(s) 301, 331
Bsc4I CCNNNNNNNGG 6 cut(s) 389, 956, 1009, 1101, 2585, 2586
Bse118I RCCGGY 1 cut(s) 1655
Bse1I ACTGG 6 cut(s) 191, 254, 543, 584, 913, 1778
Bse3DI GCAATG 4 cut(s) 852, 1443, 2075, 2120
Bse8I GATNNNNATC 2 cut(s) 457, 1039
BseAI TCCGGA 1 cut(s) 319
BseBI CCWGG 3 cut(s) 951, 2226, 2303
BseDI CCNNGG 5 cut(s) 129, 345, 950, 1711, 2302
BseGI GGATG 4 cut(s) 806, 1741, 2088, 2639
BseJI GATNNNNATC 2 cut(s) 457, 1039
BseLI CCNNNNNNNGG 6 cut(s) 389, 956, 1009, 1101, 2585, 2586
BseMI GCAATG 4 cut(s) 852, 1443, 2075, 2120
BseMII CTCAG 7 cut(s) 627, 658, 1098, 1104, 2148, 2174, 2717
BseNI ACTGG 6 cut(s) 191, 254, 543, 584, 913, 1778
BseRI GAGGAG 1 cut(s) 92
BseSI GKGCMC 2 cut(s) 1141, 2594
BseXI GCAGC 5 cut(s) 190, 451, 970, 1651, 2258
BseYI CCCAGC 2 cut(s) 2558, 2605
BsgI GTGCAG 2 cut(s) 1179, 1943
Bsh1236I CGCG 1 cut(s) 521
BshFI GGCC 7 cut(s) 174, 533, 945, 1105, 1945, 2117, 2806
BshNI GGYRCC 3 cut(s) 379, 1962, 2591
BshTI ACCGGT 1 cut(s) 1655
BsiHKAI GWGCWC 2 cut(s) 84, 728
BsiHKCI CYCGRG 2 cut(s) 770, 1099
BsiSI CCGG 7 cut(s) 92, 320, 383, 901, 1656, 1966, 2595
BsiWI CGTACG 1 cut(s) 1850
BslFI GGGAC 1 cut(s) 883
BslI CCNNNNNNNGG 6 cut(s) 389, 956, 1009, 1101, 2585, 2586
BsmAI GTCTC 7 cut(s) 152, 476, 1093, 1327, 1825, 1921, 2185
BsmFI GGGAC 1 cut(s) 883
BsmI GAATGC 1 cut(s) 1024
BsnI GGCC 7 cut(s) 174, 533, 945, 1105, 1945, 2117, 2806
Bso31I GGTCTC 5 cut(s) 152, 476, 1327, 1921, 2185
BsoBI CYCGRG 2 cut(s) 770, 1099
Bsp119I TTCGAA 1 cut(s) 869
Bsp1286I GDGCHC 4 cut(s) 84, 728, 1141, 2594
Bsp13I TCCGGA 1 cut(s) 319
Bsp1407I TGTACA 1 cut(s) 1900
BspANI GGCC 7 cut(s) 174, 533, 945, 1105, 1945, 2117, 2806
BspCNI CTCAG 7 cut(s) 628, 657, 1097, 1103, 2147, 2173, 2716
BspEI TCCGGA 1 cut(s) 319
BspFNI CGCG 1 cut(s) 521
BspHI TCATGA 3 cut(s) 853, 1744, 1771
BspLI GGNNCC 7 cut(s) 96, 135, 381, 483, 1964, 2593, 2659
BspMAI CTGCAG 2 cut(s) 469, 1279
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 6 cut(s) 242, 284, 718, 922, 1769, 2267
BspT104I TTCGAA 1 cut(s) 869
BspT107I GGYRCC 3 cut(s) 379, 1962, 2591
BspTNI GGTCTC 5 cut(s) 152, 476, 1327, 1921, 2185
BsrDI GCAATG 4 cut(s) 852, 1443, 2075, 2120
BsrFI RCCGGY 1 cut(s) 1655
BsrGI TGTACA 1 cut(s) 1900
BsrI ACTGG 6 cut(s) 191, 254, 543, 584, 913, 1778
BssAI RCCGGY 1 cut(s) 1655
BssECI CCNNGG 5 cut(s) 129, 345, 950, 1711, 2302
BssNI GRCGYC 2 cut(s) 380, 2831
BssSI CACGAG 2 cut(s) 329, 2360
Bst2BI CACGAG 2 cut(s) 329, 2360
Bst2UI CCWGG 3 cut(s) 951, 2226, 2303
Bst4CI ACNGT 9 cut(s) 150, 1338, 1381, 1456, 1712, 1795, 1994, 2412, 2475
Bst6I CTCTTC 2 cut(s) 1509, 2632
BstACI GRCGYC 2 cut(s) 380, 2831
BstAUI TGTACA 1 cut(s) 1900
BstBAI YACGTR 1 cut(s) 832
BstBI TTCGAA 1 cut(s) 869
BstC8I GCNNGC 5 cut(s) 540, 1400, 2115, 2388, 2392
BstDEI CTNAG 7 cut(s) 636, 644, 1084, 1090, 2134, 2160, 2703
BstDSI CCRYGG 2 cut(s) 129, 1711
BstF5I GGATG 4 cut(s) 806, 1741, 2088, 2639
BstFNI CGCG 1 cut(s) 521
BstH2I RGCGCY 2 cut(s) 318, 383
BstHHI GCGC 3 cut(s) 317, 382, 2359
BstMAI GTCTC 7 cut(s) 152, 476, 1093, 1327, 1825, 1921, 2185
BstMWI GCNNNNNNNGC 8 cut(s) 88, 209, 271, 274, 277, 539, 980, 1538
BstNI CCWGG 3 cut(s) 951, 2226, 2303
BstNSI RCATGY 3 cut(s) 839, 980, 2536
BstSCI CCNGG 6 cut(s) 382, 899, 949, 2224, 2301, 2594
BstSFI CTRYAG 4 cut(s) 465, 1275, 2308, 2471
BstSLI GKGCMC 2 cut(s) 1141, 2594
BstUI CGCG 1 cut(s) 521
BstV1I GCAGC 5 cut(s) 190, 451, 970, 1651, 2258
BstV2I GAAGAC 2 cut(s) 1733, 2070
BstX2I RGATCY 4 cut(s) 927, 1611, 2312, 2402
BstYI RGATCY 4 cut(s) 927, 1611, 2312, 2402
BsuI GTATCC 2 cut(s) 992, 2417
BsuRI GGCC 7 cut(s) 174, 533, 945, 1105, 1945, 2117, 2806
BtgI CCRYGG 2 cut(s) 129, 1711
BtgZI GCGATG 1 cut(s) 663
BtrI CACGTC 1 cut(s) 2756
BtsCI GGATG 4 cut(s) 806, 1741, 2088, 2639
BtsI GCAGTG 1 cut(s) 1284
BtsIMutI CAGTG 1 cut(s) 1284
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 5 cut(s) 540, 1400, 2115, 2388, 2392
CaiI CAGNNNCTG 1 cut(s) 1513
CciI TCATGA 3 cut(s) 853, 1744, 1771
CfoI GCGC 3 cut(s) 317, 382, 2359
Cfr10I RCCGGY 1 cut(s) 1655
Cfr13I GGNCC 4 cut(s) 670, 911, 944, 2805
CseI GACGC 2 cut(s) 527, 2726
Csp6I GTAC 6 cut(s) 1457, 1851, 1901, 1963, 2008, 2327
CspAI ACCGGT 1 cut(s) 1655
CviQI GTAC 6 cut(s) 1457, 1851, 1901, 1963, 2008, 2327
DdeI CTNAG 7 cut(s) 636, 644, 1084, 1090, 2134, 2160, 2703
DinI GGCGCC 1 cut(s) 381
DraI TTTAAA 2 cut(s) 753, 2770
DraIII CACNNNGTG 1 cut(s) 1145
DrdI GACNNNNNNGTC 1 cut(s) 1341
DseDI GACNNNNNNGTC 1 cut(s) 1341
EaeI YGGCCR 3 cut(s) 172, 1943, 2115
Eam1104I CTCTTC 2 cut(s) 1509, 2632
EarI CTCTTC 2 cut(s) 1509, 2632
EciI GGCGGA 2 cut(s) 903, 1282
Eco147I AGGCCT 1 cut(s) 533
Eco31I GGTCTC 5 cut(s) 152, 476, 1327, 1921, 2185
Eco32I GATATC 1 cut(s) 2240
Eco47I GGWCC 2 cut(s) 670, 911
Eco47III AGCGCT 1 cut(s) 316
Eco57I CTGAAG 1 cut(s) 1490
Eco72I CACGTG 1 cut(s) 832
Eco88I CYCGRG 2 cut(s) 770, 1099
EcoO109I RGGNCCY 1 cut(s) 670
EcoRI GAATTC 1 cut(s) 1679
EcoRII CCWGG 3 cut(s) 949, 2224, 2301
EcoRV GATATC 1 cut(s) 2240
EgeI GGCGCC 1 cut(s) 381
EheI GGCGCC 1 cut(s) 381
FalI AAGNNNNNCTT 2 cut(s) 108, 140
FaqI GGGAC 1 cut(s) 883
FauNDI CATATG 1 cut(s) 1304
FbaI TGATCA 1 cut(s) 2488
FblI GTMKAC 3 cut(s) 152, 195, 905
FokI GGATG 4 cut(s) 813, 1748, 2075, 2646
GlaI GCGC 3 cut(s) 316, 381, 2358
GsaI CCCAGC 2 cut(s) 2562, 2609
HaeII RGCGCY 2 cut(s) 318, 383
HaeIII GGCC 7 cut(s) 174, 533, 945, 1105, 1945, 2117, 2806
HapII CCGG 7 cut(s) 92, 320, 383, 901, 1656, 1966, 2595
HgaI GACGC 2 cut(s) 527, 2726
HhaI GCGC 3 cut(s) 317, 382, 2359
Hin1I GRCGYC 2 cut(s) 380, 2831
Hin6I GCGC 3 cut(s) 315, 380, 2357
HinP1I GCGC 3 cut(s) 315, 380, 2357
HincII GTYRAC 2 cut(s) 1284, 2415
HindII GTYRAC 2 cut(s) 1284, 2415
HindIII AAGCTT 1 cut(s) 2687
HinfI GANTC 9 cut(s) 487, 695, 773, 850, 1685, 2066, 2205, 2624, 2750
HpaII CCGG 7 cut(s) 92, 320, 383, 901, 1656, 1966, 2595
HphI GGTGA 7 cut(s) 1027, 1129, 1157, 1405, 1700, 1727, 2088
Hpy166II GTNNAC 7 cut(s) 153, 196, 525, 906, 1284, 1990, 2415
Hpy8I GTNNAC 7 cut(s) 153, 196, 525, 906, 1284, 1990, 2415
Hpy99I CGWCG 1 cut(s) 359
HpyAV CCTTC 9 cut(s) 941, 1207, 1335, 1348, 1418, 1519, 2134, 2425, 2722
HpyCH4III ACNGT 9 cut(s) 150, 1338, 1381, 1456, 1712, 1795, 1994, 2412, 2475
HpyCH4IV ACGT 5 cut(s) 831, 1342, 1486, 2755, 2831
HpyF10VI GCNNNNNNNGC 8 cut(s) 88, 209, 271, 274, 277, 539, 980, 1538
HpyF3I CTNAG 7 cut(s) 636, 644, 1084, 1090, 2134, 2160, 2703
HpySE526I ACGT 5 cut(s) 831, 1342, 1486, 2755, 2831
Hsp92I GRCGYC 2 cut(s) 380, 2831
HspAI GCGC 3 cut(s) 315, 380, 2357
KasI GGCGCC 1 cut(s) 379
Kpn2I TCCGGA 1 cut(s) 319
KpnI GGTACC 1 cut(s) 1966
Ksp22I TGATCA 1 cut(s) 2488
LmnI GCTCC 9 cut(s) 79, 139, 217, 223, 228, 322, 625, 723, 1052
Lsp1109I GCAGC 5 cut(s) 190, 451, 970, 1651, 2258
LweI GCATC 5 cut(s) 1259, 1768, 2206, 2431, 2510
MaeII ACGT 5 cut(s) 831, 1342, 1486, 2755, 2831
MaeIII GTNAC 8 cut(s) 257, 373, 791, 1338, 1415, 1715, 2082, 2600
MflI RGATCY 4 cut(s) 927, 1611, 2312, 2402
MhlI GDGCHC 4 cut(s) 84, 728, 1141, 2594
MlsI TGGCCA 1 cut(s) 1945
MluI ACGCGT 1 cut(s) 519
MluNI TGGCCA 1 cut(s) 1945
Mly113I GGCGCC 1 cut(s) 380
MlyI GAGTC 4 cut(s) 782, 1679, 2060, 2618
MmeI TCCRAC 1 cut(s) 1848
Mox20I TGGCCA 1 cut(s) 1945
MroI TCCGGA 1 cut(s) 319
MroXI GAANNNNTTC 2 cut(s) 486, 1170
MscI TGGCCA 1 cut(s) 1945
MslI CAYNNNNRTG 5 cut(s) 371, 834, 840, 1713, 2496
Msp20I TGGCCA 1 cut(s) 1945
MspA1I CMGCKG 1 cut(s) 2249
MspI CCGG 7 cut(s) 92, 320, 383, 901, 1656, 1966, 2595
MspR9I CCNGG 6 cut(s) 384, 901, 951, 2226, 2303, 2596
Mva1269I GAATGC 1 cut(s) 1024
MvaI CCWGG 3 cut(s) 951, 2226, 2303
MvnI CGCG 1 cut(s) 521
MwoI GCNNNNNNNGC 8 cut(s) 88, 209, 271, 274, 277, 539, 980, 1538
NarI GGCGCC 1 cut(s) 380
NciI CCSGG 3 cut(s) 384, 901, 2596
NdeI CATATG 1 cut(s) 1304
NlaIV GGNNCC 7 cut(s) 96, 135, 381, 483, 1964, 2593, 2659
NmuCI GTSAC 2 cut(s) 373, 1715
NspI RCATGY 3 cut(s) 839, 980, 2536
NspV TTCGAA 1 cut(s) 869
OliI CACNNNNGTG 1 cut(s) 1713
PaeR7I CTCGAG 1 cut(s) 1099
PagI TCATGA 3 cut(s) 853, 1744, 1771
PceI AGGCCT 1 cut(s) 533
PciI ACATGT 1 cut(s) 976
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PctI GAATGC 1 cut(s) 1024
PdmI GAANNNNTTC 2 cut(s) 486, 1170
PfeI GAWTC 5 cut(s) 487, 695, 850, 2205, 2750
Pfl23II CGTACG 1 cut(s) 1850
PflMI CCANNNNNTGG 1 cut(s) 956
PinAI ACCGGT 1 cut(s) 1655
PleI GAGTC 4 cut(s) 781, 1679, 2060, 2618
PluTI GGCGCC 1 cut(s) 383
PmaCI CACGTG 1 cut(s) 832
PmlI CACGTG 1 cut(s) 832
PpsI GAGTC 4 cut(s) 781, 1679, 2060, 2618
Ppu21I YACGTR 1 cut(s) 832
PpuMI RGGWCCY 1 cut(s) 670
PscI ACATGT 1 cut(s) 976
PshBI ATTAAT 1 cut(s) 2283
Psp5II RGGWCCY 1 cut(s) 670
Psp6I CCWGG 3 cut(s) 949, 2224, 2301
PspCI CACGTG 1 cut(s) 832
PspFI CCCAGC 2 cut(s) 2558, 2605
PspGI CCWGG 3 cut(s) 949, 2224, 2301
PspLI CGTACG 1 cut(s) 1850
PspN4I GGNNCC 7 cut(s) 96, 135, 381, 483, 1964, 2593, 2659
PspPI GGNCC 4 cut(s) 670, 911, 944, 2805
PspPPI RGGWCCY 1 cut(s) 670
PspXI VCTCGAGB 1 cut(s) 1099
PsrI GAACNNNNNNTAC 2 cut(s) 423, 455
PstI CTGCAG 2 cut(s) 469, 1279
PstNI CAGNNNCTG 1 cut(s) 1513
PsuI RGATCY 4 cut(s) 927, 1611, 2312, 2402
PvuII CAGCTG 1 cut(s) 2249
RsaI GTAC 6 cut(s) 1458, 1852, 1902, 1964, 2009, 2328
RsaNI GTAC 6 cut(s) 1457, 1851, 1901, 1963, 2008, 2327
RseI CAYNNNNRTG 5 cut(s) 371, 834, 840, 1713, 2496
Sau96I GGNCC 4 cut(s) 670, 911, 944, 2805
SchI GAGTC 4 cut(s) 782, 1679, 2060, 2618
ScrFI CCNGG 6 cut(s) 384, 901, 951, 2226, 2303, 2596
SduI GDGCHC 4 cut(s) 84, 728, 1141, 2594
SfaNI GCATC 5 cut(s) 1259, 1768, 2206, 2431, 2510
SfcI CTRYAG 4 cut(s) 465, 1275, 2308, 2471
SfoI GGCGCC 1 cut(s) 381
Sfr274I CTCGAG 1 cut(s) 1099
SfuI TTCGAA 1 cut(s) 869
SinI GGWCC 2 cut(s) 670, 911
SlaI CTCGAG 1 cut(s) 1099
SmiMI CAYNNNNRTG 5 cut(s) 371, 834, 840, 1713, 2496
SmlI CTYRAG 2 cut(s) 1099, 1557
SmoI CTYRAG 2 cut(s) 1099, 1557
SseBI AGGCCT 1 cut(s) 533
SspDI GGCGCC 1 cut(s) 379
SspI AATATT 1 cut(s) 1936
StuI AGGCCT 1 cut(s) 533
StyD4I CCNGG 6 cut(s) 382, 899, 949, 2224, 2301, 2594
TaaI ACNGT 9 cut(s) 150, 1338, 1381, 1456, 1712, 1795, 1994, 2412, 2475
TaiI ACGT 5 cut(s) 834, 1345, 1489, 2758, 2834
TaqI TCGA 9 cut(s) 39, 237, 354, 869, 1100, 1387, 1570, 1683, 2537
TatI WGTACW 3 cut(s) 1456, 1900, 2326
TauI GCSGC 6 cut(s) 268, 271, 274, 277, 280, 2120
TfiI GAWTC 5 cut(s) 487, 695, 850, 2205, 2750
TscAI CASTG 1 cut(s) 1284
TseFI GTSAC 2 cut(s) 373, 1715
TseI GCWGC 5 cut(s) 203, 464, 983, 1639, 2246
Tsp45I GTSAC 2 cut(s) 373, 1715
TspGWI ACGGA 2 cut(s) 89, 241
TspRI CASTG 1 cut(s) 1284
Van91I CCANNNNNTGG 1 cut(s) 956
VpaK11BI GGWCC 2 cut(s) 670, 911
VspI ATTAAT 1 cut(s) 2283
XapI RAATTY 5 cut(s) 821, 1059, 1679, 2771, 2822
XbaI TCTAGA 1 cut(s) 548
XceI RCATGY 3 cut(s) 839, 980, 2536
XcmI CCANNNNNNNNNTGG 1 cut(s) 1938
XhoI CTCGAG 1 cut(s) 1099
XmiI GTMKAC 3 cut(s) 152, 195, 905
XmnI GAANNNNTTC 2 cut(s) 486, 1170
ZraI GACGTC 1 cut(s) 2832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.