Rh4DG003000

chromosome transmission fidelity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000880
Physical Location & Seq
Forward (+)
537452 .. 548781
11330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG003000.1

Sequence Viewer

Length: 2874 bp
ATGGACATGGAGATGGAGATGGAGATGGAGATGGACGAGCTCGAATTGCTTGAAGCCAACTATCAGCTCCACGAAGATTGCACGGAGCTCGAACCGCCGGAACCCTATCCAGAAGAAGAAGACCAACATCCTACCGGTTCCAAATCGCCGCCGTCGACTGACCACCAGCAGTCGACTGAAACCCAAATCAACGGCCACAAGCGTTTGCGACCAGAAGACGAAACTGCCGAAGCTCCCGGACCATCTGACGAGAAACGGAGCAGGATCGAAGATGAGGATTGGCTTCGATACTCGCCGCCGCACCAGATCGATCCTGTTGTTGAAGAAACAAGTGCTAATCTTGTGGAGGAGAAGATTGTGTCTAGGTATGCCTCCGAGATCGACGGTGATTTCATTCCGGTGACGGCGCCGGGTTTGGGCGATAGGGTTTATGCCAAGATTTCTAGGGTGGAGATGGAGGAGCGTCCACAGAGATTAGGACAATCTCAATCTGGAGGTCTCATTTCGGAACCTATTGATGTTCTACTGCAAAGACTGGAGCAAGAGGCATTTACAAGGGCCTTGCAAGCCAGTTCCAGAGGTCAAAGTGATGTTATTCTTCCCGAAACACCAGTTGTGCATGAACGACTTTGGGTGGATAAATATGCTCCAAACTCATTTACTGAGCTTCTCAGCGATGAACAGACAAATCGTGAGGTCCTGCTTTGGCTAAAACAATGGGATTCTTGTGTTTTTGGATCAGCGATTAGGAGCACATCAGATGAGGTTTTGTCTGCTTTAAAACGACATTCTTCTATCACTCAACATCAAAAACTTTCCGAGTCAAAGTTTCCAAGAAGTAACAGAGGATCCAGATGGAATAATGAAAAAATTAAGCATTTCAATGGTATGAATCATGAAAATACTAATTCAAAAAGCGTTCAAGAGTTGTCAAACAATTCCCGGTCTACTGGTCCGCCAGAACAAAAGATCCTCTTACTTTGTGGCCCACCAGGGCTCGGAAAGACTACACTTGCACATGTGGCTGCAAAGCATTGTGGATACCGAGTGGTGGAGGTGAATGCTAGTGATGATCGATCATCATCAACTATTGGAGCTAAAATTCTTGATGTTGTTCAGATGAACTCAGTCTCAGCCGACTCAAGGCCAAAGTGTTTGGTGATTGACGAAATAGATGGGGCACTTGGTGATGGAAAAGGTGCGGTTGAAGTCATTCTAAAAATGGTTTCTGCTGATAAGAAGTCTGATATGGAGAAGGAAAATGTTAATAAAGAACAAACATCAGGAAAGGCATCTTCAAAAAAGGGGCGGAAATCTGCATCCTTGTTAAGACCTATTATTTGCATATGCAATGACCTATACGCACCTTCGTTGAGACCATTACGTCAGATAGCGAAGGTTCATGTTTTTGTTCAACCAACAGTGAATCGAGTGGTGAGCAGGCTTAAATATATATGTAACAAGGAAGGAATGAAAACAAGTTCCATTGCACTTACTGTACTTGCAGAGCATACAGAATGCGATATACGTTCATGCTTGAACACTCTTCAGTTCCTGAACAAGAAGAAGGAAGCACTCAACGCTTGGGATATTGGCTCTCAAGTGGTTGGTCGAAAGGATATGTCAAGAGGTGTGTTTGATGTCTGGAAAGAGATCTTCCAAAAGAGAAAACCGAAGAGGCAGCAAAGAACAAATAACAGTTGTGGAATAATATCAAGTGAATTCGACTCTTTGCATTCTCTCATTTCTCACCGTGGTGACTATGATTTGATTGTGGATGGTCTTCATGAAAACGTTTTGCATCTTCCTTATCATGATCCAGTGATGCAAAAGACTGTCAAATGCTTGAATAGCCTTGGTGTCTCTGACCTTATGAATAAATATATTATGCGTACACAACACATGTCCCTTTATGCTTATCAGCCTGCTATTGCCATAATTGTACATCGTTTAGTAGCCCAAGTGCAGAGACCGAATATTGAGTGGCCAAAATCTTATTATAGGTACCGGACAATGTTAATGGAAAAAGTGGACAGTTTGAAGTCTTGGTACAAGACAATTCCACCATCTATTTCAAGGCATTTGTCAATTAAGTCCTTTGTAGAAGACTCAATTTCATTGCTGTTACACATCCTATCACCCCCAACTCTAAGGCTGGCCGCATTGCACTTATTATCAGAGAAGGAGAAGAATGATCTGGCTCAGTTAGTTAGCACGATGGTCTCCTATTCTATAACACATAGAAGGATCAAAGCTGATCCTGTGACTGGCAATCTCGGGCATCAAGCAGCTGATGTGTCGGAGCTGTCTTTTGATCCCCCCATTAATGGCTTTGTTAACTTCCAGGGCTACAGATCTGGCCATCATGTACTTGCCTCAACTATGAAACAGATGTTGGCGCTCGAGGTTGAAAAGCAAAGGATTTTGCAAGCAAGCATTGGGAGATCTGCACAGTTGACAGATGGATACAACAAGGAAAACCATGCTTCTTTAAGGCTAGAAACTAGGAGATTACAATCTGGTAGAGCTGATCATTTAGGTGCATCTGCTGTGAACAATGGAAAGTCAGAAAGCCTGTCAAATAGGACACAATCAAATCCCAGTATTTCCGGTGTTTTACCTAACTTGGGCACTGGGAATACCCCAGTGAGTACAAAGTTAAACTCTTCTGGATGTATGAGAAAGCCGTCTGGTGGTTCCTCTAGTTTCTTTGATAGGTTTAGAAAGCTTGGTAAAGGTTCTCAGAACACTGCTGAGGCTGTGCGGAAGGAAGCAACCTCTGAGAGAGATTCACGTCCTTTGGTCTTTAAATTTAATGAGGGCTTTACAAATGCAGTTAAAAGGCCAGTTCGTGTTCGGGAGTTTCTGACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

957

Amino Acids

107.3

Weight (kDa)

8.22

Isoelectric Point (pI)

51.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 325 - 409 1.4e-13 ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1 PF25361 476 - 527 6.7e-08 RFC1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1383
Acc65I GGTACC 1 cut(s) 2004
AccB1I GGYRCC 2 cut(s) 406, 2004
AccI GTMKAC 3 cut(s) 155, 173, 947
AciI CCGC 9 cut(s) 95, 149, 296, 299, 956, 1202, 1309, 2160, 2764
AclI AACGTT 1 cut(s) 1794
AcoI YGGCCR 4 cut(s) 193, 1985, 2157, 2359
AcsI RAATTY 3 cut(s) 1101, 1721, 2810
AcuI CTGAAG 1 cut(s) 1532
AcyI GRCGYC 1 cut(s) 407
AdeI CACNNNGTG 1 cut(s) 1187
AfaI GTAC 7 cut(s) 1500, 1894, 1944, 2006, 2051, 2370, 2653
AfiI CCNNNNNNNGG 8 cut(s) 416, 998, 1051, 1143, 2267, 2327, 2627, 2693
AflIII ACRYGT 2 cut(s) 1018, 1902
AgeI ACCGGT 1 cut(s) 134
AjiI CACGTC 1 cut(s) 2795
AjnI CCWGG 2 cut(s) 991, 2343
AjuI GAANNNNNNNTTGG 2 cut(s) 2378, 2410
AleI CACNNNNGTG 1 cut(s) 1755
AloI GAACNNNNNNTCC 2 cut(s) 954, 986
Alw21I GWGCWC 3 cut(s) 42, 90, 755
Alw26I GTCTC 6 cut(s) 503, 1135, 1369, 1867, 1963, 2227
AlwNI CAGNNNCTG 1 cut(s) 1555
Ama87I CYCGRG 2 cut(s) 2276, 2402
AoxI GGCC 8 cut(s) 193, 558, 985, 1145, 1985, 2157, 2359, 2843
ApeKI GCWGC 3 cut(s) 1025, 1681, 2288
ApoI RAATTY 3 cut(s) 1101, 1721, 2810
ArsI GACNNNNNNTTYG 2 cut(s) 1323, 1355
AseI ATTAAT 1 cut(s) 2325
AsiGI ACCGGT 1 cut(s) 134
Asp700I GAANNNNTTC 1 cut(s) 1212
Asp718I GGTACC 1 cut(s) 2004
AspLEI GCGC 2 cut(s) 409, 2401
AspS9I GGNCC 5 cut(s) 239, 558, 697, 953, 986
AsuC2I CCSGG 3 cut(s) 237, 411, 943
AsuHPI GGTGA 9 cut(s) 398, 412, 1069, 1171, 1199, 1447, 1742, 1769, 2130
AvaI CYCGRG 2 cut(s) 2276, 2402
AvaII GGWCC 3 cut(s) 239, 697, 953
BaeGI GKGCMC 2 cut(s) 1183, 2633
BalI TGGCCA 2 cut(s) 1987, 2361
BamHI GGATCC 1 cut(s) 848
BanI GGYRCC 2 cut(s) 406, 2004
BanII GRGCYC 3 cut(s) 42, 90, 999
BarI GAAGNNNNNNTAC 2 cut(s) 2033, 2065
BbsI GAAGAC 4 cut(s) 126, 222, 1775, 2112
Bbv12I GWGCWC 3 cut(s) 42, 90, 755
BbvCI CCTCAGC 1 cut(s) 2754
BbvI GCAGC 3 cut(s) 1012, 1693, 2300
BceAI ACGGC 4 cut(s) 136, 208, 420, 2671
BcgI CGANNNNNNTGC 2 cut(s) 70, 104
BciT130I CCWGG 2 cut(s) 993, 2345
BciVI GTATCC 2 cut(s) 1034, 2459
BclI TGATCA 1 cut(s) 2530
BcnI CCSGG 3 cut(s) 237, 411, 943
BcoDI GTCTC 6 cut(s) 503, 1135, 1369, 1867, 1963, 2227
BfaI CTAG 6 cut(s) 363, 444, 1065, 2498, 2505, 2703
BfmI CTRYAG 1 cut(s) 2350
BfoI RGCGCY 2 cut(s) 410, 2402
BfuI GTATCC 2 cut(s) 1034, 2459
BglII AGATCT 3 cut(s) 1653, 2354, 2444
BisI GCNGC 7 cut(s) 149, 296, 299, 1026, 1682, 2160, 2289
BlsI GCNGC 7 cut(s) 150, 297, 300, 1027, 1683, 2161, 2290
Bme1390I CCNGG 5 cut(s) 237, 411, 943, 993, 2345
Bme18I GGWCC 3 cut(s) 239, 697, 953
BmeT110I CYCGRG 2 cut(s) 2276, 2402
BmgBI CACGTC 1 cut(s) 2795
BmgT120I GGNCC 5 cut(s) 239, 558, 697, 953, 986
BmiI GGNNCC 7 cut(s) 102, 139, 408, 510, 850, 2006, 2698
BmrFI CCNGG 5 cut(s) 237, 411, 943, 993, 2345
BmrI ACTGGG 3 cut(s) 2595, 2639, 2643
BmsI GCATC 6 cut(s) 1301, 1328, 1810, 1815, 2290, 2552
BmuI ACTGGG 3 cut(s) 2595, 2639, 2643
BpiI GAAGAC 4 cut(s) 126, 222, 1775, 2112
BpmI CTGGAG 2 cut(s) 513, 557
Bpu10I CCTNAGC 1 cut(s) 2754
BpuEI CTTGAG 2 cut(s) 1126, 1584
BpuMI CCSGG 3 cut(s) 237, 411, 943
Bsa29I ATCGAT 2 cut(s) 309, 1075
BsaBI GATNNNNATC 2 cut(s) 1081, 2515
BsaHI GRCGYC 1 cut(s) 407
BsaI GGTCTC 4 cut(s) 503, 1369, 1963, 2227
BsaJI CCNNGG 4 cut(s) 992, 1753, 1855, 2344
BsaWI WCCGGW 4 cut(s) 134, 397, 2007, 2609
Bsc4I CCNNNNNNNGG 8 cut(s) 416, 998, 1051, 1143, 2267, 2327, 2627, 2693
Bse118I RCCGGY 1 cut(s) 134
Bse3DI GCAATG 4 cut(s) 1357, 1485, 2117, 2162
Bse8I GATNNNNATC 2 cut(s) 1081, 2515
BseBI CCWGG 2 cut(s) 993, 2345
BseCI ATCGAT 2 cut(s) 309, 1075
BseDI CCNNGG 4 cut(s) 992, 1753, 1855, 2344
BseGI GGATG 5 cut(s) 127, 1319, 1783, 2130, 2678
BseJI GATNNNNATC 2 cut(s) 1081, 2515
BseLI CCNNNNNNNGG 8 cut(s) 416, 998, 1051, 1143, 2267, 2327, 2627, 2693
BseMI GCAATG 4 cut(s) 1357, 1485, 2117, 2162
BseMII CTCAG 8 cut(s) 654, 685, 1140, 1146, 2216, 2745, 2756, 2772
BseRI GAGGAG 2 cut(s) 362, 473
BseSI GKGCMC 2 cut(s) 1183, 2633
BseXI GCAGC 3 cut(s) 1012, 1693, 2300
BsgI GTGCAG 2 cut(s) 1985, 2433
BshFI GGCC 8 cut(s) 195, 560, 987, 1147, 1987, 2159, 2361, 2845
BshNI GGYRCC 2 cut(s) 406, 2004
BshTI ACCGGT 1 cut(s) 134
BshVI ATCGAT 2 cut(s) 309, 1075
BsiHKAI GWGCWC 3 cut(s) 42, 90, 755
BsiHKCI CYCGRG 2 cut(s) 2276, 2402
BsiSI CCGG 8 cut(s) 98, 135, 237, 398, 410, 943, 2008, 2610
BslFI GGGAC 1 cut(s) 1891
BslI CCNNNNNNNGG 8 cut(s) 416, 998, 1051, 1143, 2267, 2327, 2627, 2693
BsmAI GTCTC 6 cut(s) 503, 1135, 1369, 1867, 1963, 2227
BsmFI GGGAC 1 cut(s) 1891
BsmI GAATGC 3 cut(s) 1066, 1523, 1735
BsnI GGCC 8 cut(s) 195, 560, 987, 1147, 1987, 2159, 2361, 2845
Bso31I GGTCTC 4 cut(s) 503, 1369, 1963, 2227
BsoBI CYCGRG 2 cut(s) 2276, 2402
Bsp1286I GDGCHC 6 cut(s) 42, 90, 755, 999, 1183, 2633
Bsp1407I TGTACA 1 cut(s) 1942
BspACI CCGC 9 cut(s) 95, 149, 296, 299, 956, 1202, 1309, 2160, 2764
BspANI GGCC 8 cut(s) 195, 560, 987, 1147, 1987, 2159, 2361, 2845
BspCNI CTCAG 8 cut(s) 655, 684, 1139, 1145, 2215, 2746, 2755, 2773
BspDI ATCGAT 2 cut(s) 309, 1075
BspHI TCATGA 3 cut(s) 895, 1786, 1813
BspLI GGNNCC 7 cut(s) 102, 139, 408, 510, 850, 2006, 2698
BspT107I GGYRCC 2 cut(s) 406, 2004
BspTNI GGTCTC 4 cut(s) 503, 1369, 1963, 2227
BsrDI GCAATG 4 cut(s) 1357, 1485, 2117, 2162
BsrFI RCCGGY 1 cut(s) 134
BsrGI TGTACA 1 cut(s) 1942
BssAI RCCGGY 1 cut(s) 134
BssECI CCNNGG 4 cut(s) 992, 1753, 1855, 2344
BssNI GRCGYC 1 cut(s) 407
BssT1I CCWWGG 1 cut(s) 1855
Bst2UI CCWGG 2 cut(s) 993, 2345
Bst4CI ACNGT 8 cut(s) 386, 1423, 1498, 1700, 1754, 1837, 2036, 2454
Bst6I CTCTTC 3 cut(s) 1551, 1670, 2671
BstACI GRCGYC 1 cut(s) 407
BstAUI TGTACA 1 cut(s) 1942
BstC8I GCNNGC 6 cut(s) 567, 1442, 1926, 2157, 2430, 2434
BstDEI CTNAG 9 cut(s) 663, 671, 1126, 1132, 2150, 2202, 2742, 2754, 2781
BstDSI CCRYGG 1 cut(s) 1753
BstF5I GGATG 5 cut(s) 127, 1319, 1783, 2130, 2678
BstH2I RGCGCY 2 cut(s) 410, 2402
BstHHI GCGC 2 cut(s) 409, 2401
BstMAI GTCTC 6 cut(s) 503, 1135, 1369, 1867, 1963, 2227
BstMWI GCNNNNNNNGC 6 cut(s) 46, 94, 566, 1022, 1580, 1851
BstNI CCWGG 2 cut(s) 993, 2345
BstNSI RCATGY 2 cut(s) 1022, 1906
BstSCI CCNGG 5 cut(s) 235, 409, 941, 991, 2343
BstSFI CTRYAG 1 cut(s) 2350
BstSLI GKGCMC 2 cut(s) 1183, 2633
BstV1I GCAGC 3 cut(s) 1012, 1693, 2300
BstV2I GAAGAC 4 cut(s) 126, 222, 1775, 2112
BstX2I RGATCY 5 cut(s) 848, 969, 1653, 2354, 2444
BstYI RGATCY 5 cut(s) 848, 969, 1653, 2354, 2444
Bsu15I ATCGAT 2 cut(s) 309, 1075
BsuI GTATCC 2 cut(s) 1034, 2459
BsuRI GGCC 8 cut(s) 195, 560, 987, 1147, 1987, 2159, 2361, 2845
BsuTUI ATCGAT 2 cut(s) 309, 1075
BtgI CCRYGG 1 cut(s) 1753
BtgZI GCGATG 1 cut(s) 690
BtrI CACGTC 1 cut(s) 2795
BtsCI GGATG 5 cut(s) 127, 1319, 1783, 2130, 2678
BtsI GCAGTG 1 cut(s) 2748
BtsIMutI CAGTG 5 cut(s) 1428, 1827, 2631, 2652, 2748
Cac8I GCNNGC 6 cut(s) 567, 1442, 1926, 2157, 2430, 2434
CaiI CAGNNNCTG 1 cut(s) 1555
CciI TCATGA 3 cut(s) 895, 1786, 1813
CfoI GCGC 2 cut(s) 409, 2401
Cfr10I RCCGGY 1 cut(s) 134
Cfr13I GGNCC 5 cut(s) 239, 558, 697, 953, 986
ClaI ATCGAT 2 cut(s) 309, 1075
CseI GACGC 1 cut(s) 452
Csp6I GTAC 7 cut(s) 1499, 1893, 1943, 2005, 2050, 2369, 2652
CspAI ACCGGT 1 cut(s) 134
CspCI CAANNNNNGTGG 2 cut(s) 59, 94
CviQI GTAC 7 cut(s) 1499, 1893, 1943, 2005, 2050, 2369, 2652
DdeI CTNAG 9 cut(s) 663, 671, 1126, 1132, 2150, 2202, 2742, 2754, 2781
DinI GGCGCC 1 cut(s) 408
DraI TTTAAA 2 cut(s) 780, 2809
DraIII CACNNNGTG 1 cut(s) 1187
DrdI GACNNNNNNGTC 1 cut(s) 1383
DseDI GACNNNNNNGTC 1 cut(s) 1383
EaeI YGGCCR 4 cut(s) 193, 1985, 2157, 2359
Eam1104I CTCTTC 3 cut(s) 1551, 1670, 2671
EarI CTCTTC 3 cut(s) 1551, 1670, 2671
EciI GGCGGA 2 cut(s) 945, 1324
Ecl136II GAGCTC 2 cut(s) 40, 88
Eco130I CCWWGG 1 cut(s) 1855
Eco24I GRGCYC 3 cut(s) 42, 90, 999
Eco31I GGTCTC 4 cut(s) 503, 1369, 1963, 2227
Eco47I GGWCC 3 cut(s) 239, 697, 953
Eco53kI GAGCTC 2 cut(s) 40, 88
Eco57I CTGAAG 1 cut(s) 1532
Eco88I CYCGRG 2 cut(s) 2276, 2402
EcoICRI GAGCTC 2 cut(s) 40, 88
EcoO109I RGGNCCY 2 cut(s) 558, 697
EcoRI GAATTC 1 cut(s) 1721
EcoRII CCWGG 2 cut(s) 991, 2343
EcoT14I CCWWGG 1 cut(s) 1855
EcoT38I GRGCYC 3 cut(s) 42, 90, 999
EgeI GGCGCC 1 cut(s) 408
EheI GGCGCC 1 cut(s) 408
ErhI CCWWGG 1 cut(s) 1855
FalI AAGNNNNNCTT 2 cut(s) 959, 991
FaqI GGGAC 1 cut(s) 1891
FauNDI CATATG 1 cut(s) 1346
FbaI TGATCA 1 cut(s) 2530
FblI GTMKAC 3 cut(s) 155, 173, 947
Fnu4HI GCNGC 7 cut(s) 149, 296, 299, 1026, 1682, 2160, 2289
FokI GGATG 5 cut(s) 114, 1306, 1790, 2117, 2685
FriOI GRGCYC 3 cut(s) 42, 90, 999
Fsp4HI GCNGC 7 cut(s) 149, 296, 299, 1026, 1682, 2160, 2289
FspBI CTAG 6 cut(s) 363, 444, 1065, 2498, 2505, 2703
GlaI GCGC 2 cut(s) 408, 2400
GluI GCNGC 7 cut(s) 149, 296, 299, 1026, 1682, 2160, 2289
GsuI CTGGAG 2 cut(s) 513, 557
HaeII RGCGCY 2 cut(s) 410, 2402
HaeIII GGCC 8 cut(s) 195, 560, 987, 1147, 1987, 2159, 2361, 2845
HapII CCGG 8 cut(s) 98, 135, 237, 398, 410, 943, 2008, 2610
HgaI GACGC 1 cut(s) 452
HhaI GCGC 2 cut(s) 409, 2401
Hin1I GRCGYC 1 cut(s) 407
Hin6I GCGC 2 cut(s) 407, 2399
HinP1I GCGC 2 cut(s) 407, 2399
HincII GTYRAC 4 cut(s) 156, 174, 2338, 2457
HindII GTYRAC 4 cut(s) 156, 174, 2338, 2457
HindIII AAGCTT 1 cut(s) 2726
HinfI GANTC 8 cut(s) 722, 821, 892, 1139, 1426, 1727, 2108, 2789
HpaI GTTAAC 1 cut(s) 2338
HpaII CCGG 8 cut(s) 98, 135, 237, 398, 410, 943, 2008, 2610
HphI GGTGA 9 cut(s) 398, 412, 1069, 1171, 1199, 1447, 1742, 1769, 2130
Hpy166II GTNNAC 9 cut(s) 156, 174, 467, 948, 1895, 2032, 2338, 2457, 2554
Hpy8I GTNNAC 9 cut(s) 156, 174, 467, 948, 1895, 2032, 2338, 2457, 2554
Hpy99I CGWCG 2 cut(s) 157, 386
HpyAV CCTTC 8 cut(s) 1249, 1377, 1390, 1460, 1561, 2176, 2238, 2761
HpyCH4III ACNGT 8 cut(s) 386, 1423, 1498, 1700, 1754, 1837, 2036, 2454
HpyCH4IV ACGT 5 cut(s) 1384, 1528, 1794, 2794, 2870
HpyF10VI GCNNNNNNNGC 6 cut(s) 46, 94, 566, 1022, 1580, 1851
HpyF3I CTNAG 9 cut(s) 663, 671, 1126, 1132, 2150, 2202, 2742, 2754, 2781
HpySE526I ACGT 5 cut(s) 1384, 1528, 1794, 2794, 2870
Hsp92I GRCGYC 1 cut(s) 407
HspAI GCGC 2 cut(s) 407, 2399
KasI GGCGCC 1 cut(s) 406
KpnI GGTACC 1 cut(s) 2008
Ksp22I TGATCA 1 cut(s) 2530
KspAI GTTAAC 1 cut(s) 2338
Lsp1109I GCAGC 3 cut(s) 1012, 1693, 2300
LweI GCATC 6 cut(s) 1301, 1328, 1810, 1815, 2290, 2552
MaeI CTAG 6 cut(s) 363, 444, 1065, 2498, 2505, 2703
MaeII ACGT 5 cut(s) 1384, 1528, 1794, 2794, 2870
MaeIII GTNAC 6 cut(s) 400, 839, 1457, 1757, 2124, 2263
MflI RGATCY 5 cut(s) 848, 969, 1653, 2354, 2444
MhlI GDGCHC 6 cut(s) 42, 90, 755, 999, 1183, 2633
MlsI TGGCCA 2 cut(s) 1987, 2361
MluNI TGGCCA 2 cut(s) 1987, 2361
Mly113I GGCGCC 1 cut(s) 407
MlyI GAGTC 4 cut(s) 830, 1133, 1721, 2102
MmeI TCCRAC 1 cut(s) 2280
Mox20I TGGCCA 2 cut(s) 1987, 2361
MroXI GAANNNNTTC 1 cut(s) 1212
MscI TGGCCA 2 cut(s) 1987, 2361
MslI CAYNNNNRTG 5 cut(s) 11, 398, 882, 1755, 2538
Msp20I TGGCCA 2 cut(s) 1987, 2361
MspA1I CMGCKG 1 cut(s) 2291
MspI CCGG 8 cut(s) 98, 135, 237, 398, 410, 943, 2008, 2610
MspR9I CCNGG 5 cut(s) 237, 411, 943, 993, 2345
Mva1269I GAATGC 3 cut(s) 1066, 1523, 1735
MvaI CCWGG 2 cut(s) 993, 2345
MwoI GCNNNNNNNGC 6 cut(s) 46, 94, 566, 1022, 1580, 1851
NarI GGCGCC 1 cut(s) 407
NciI CCSGG 3 cut(s) 237, 411, 943
NdeI CATATG 1 cut(s) 1346
NlaIV GGNNCC 7 cut(s) 102, 139, 408, 510, 850, 2006, 2698
NmuCI GTSAC 3 cut(s) 400, 1757, 2263
NspI RCATGY 2 cut(s) 1022, 1906
OliI CACNNNNGTG 1 cut(s) 1755
PaeR7I CTCGAG 1 cut(s) 2402
PagI TCATGA 3 cut(s) 895, 1786, 1813
PciI ACATGT 2 cut(s) 1018, 1902
PcsI WCGNNNNNNNCGW 2 cut(s) 152, 225
PctI GAATGC 3 cut(s) 1066, 1523, 1735
PdmI GAANNNNTTC 1 cut(s) 1212
PfeI GAWTC 4 cut(s) 722, 892, 1426, 2789
PfoI TCCNGGA 1 cut(s) 235
PinAI ACCGGT 1 cut(s) 134
PkrI GCNGC 7 cut(s) 150, 297, 300, 1027, 1683, 2161, 2290
PleI GAGTC 4 cut(s) 829, 1133, 1721, 2102
PluTI GGCGCC 1 cut(s) 410
PpsI GAGTC 4 cut(s) 829, 1133, 1721, 2102
PpuMI RGGWCCY 1 cut(s) 697
PscI ACATGT 2 cut(s) 1018, 1902
PshBI ATTAAT 1 cut(s) 2325
Psp124BI GAGCTC 2 cut(s) 42, 90
Psp1406I AACGTT 1 cut(s) 1794
Psp5II RGGWCCY 1 cut(s) 697
Psp6I CCWGG 2 cut(s) 991, 2343
PspGI CCWGG 2 cut(s) 991, 2343
PspN4I GGNNCC 7 cut(s) 102, 139, 408, 510, 850, 2006, 2698
PspPI GGNCC 5 cut(s) 239, 558, 697, 953, 986
PspPPI RGGWCCY 1 cut(s) 697
PspXI VCTCGAGB 1 cut(s) 2402
PstNI CAGNNNCTG 1 cut(s) 1555
PsuI RGATCY 5 cut(s) 848, 969, 1653, 2354, 2444
PvuII CAGCTG 1 cut(s) 2291
RsaI GTAC 7 cut(s) 1500, 1894, 1944, 2006, 2051, 2370, 2653
RsaNI GTAC 7 cut(s) 1499, 1893, 1943, 2005, 2050, 2369, 2652
RseI CAYNNNNRTG 5 cut(s) 11, 398, 882, 1755, 2538
SacI GAGCTC 2 cut(s) 42, 90
SalI GTCGAC 2 cut(s) 154, 172
SatI GCNGC 7 cut(s) 149, 296, 299, 1026, 1682, 2160, 2289
Sau96I GGNCC 5 cut(s) 239, 558, 697, 953, 986
SchI GAGTC 4 cut(s) 830, 1133, 1721, 2102
ScrFI CCNGG 5 cut(s) 237, 411, 943, 993, 2345
SduI GDGCHC 6 cut(s) 42, 90, 755, 999, 1183, 2633
SfaNI GCATC 6 cut(s) 1301, 1328, 1810, 1815, 2290, 2552
SfcI CTRYAG 1 cut(s) 2350
SfoI GGCGCC 1 cut(s) 408
Sfr274I CTCGAG 1 cut(s) 2402
SinI GGWCC 3 cut(s) 239, 697, 953
SlaI CTCGAG 1 cut(s) 2402
SmiMI CAYNNNNRTG 5 cut(s) 11, 398, 882, 1755, 2538
SmlI CTYRAG 3 cut(s) 1141, 1599, 2402
SmoI CTYRAG 3 cut(s) 1141, 1599, 2402
SsiI CCGC 9 cut(s) 95, 149, 296, 299, 956, 1202, 1309, 2160, 2764
SspDI GGCGCC 1 cut(s) 406
SspI AATATT 1 cut(s) 1978
SspMI CTAG 6 cut(s) 363, 444, 1065, 2498, 2505, 2703
SstI GAGCTC 2 cut(s) 42, 90
StyD4I CCNGG 5 cut(s) 235, 409, 941, 991, 2343
StyI CCWWGG 1 cut(s) 1855
TaaI ACNGT 8 cut(s) 386, 1423, 1498, 1700, 1754, 1837, 2036, 2454
TaiI ACGT 5 cut(s) 1387, 1531, 1797, 2797, 2873
TaqII GACCGA 1 cut(s) 1987
TatI WGTACW 4 cut(s) 1498, 1942, 2368, 2651
TauI GCSGC 4 cut(s) 151, 298, 301, 2162
TfiI GAWTC 4 cut(s) 722, 892, 1426, 2789
TscAI CASTG 5 cut(s) 1428, 1827, 2638, 2652, 2755
TseFI GTSAC 3 cut(s) 400, 1757, 2263
TseI GCWGC 3 cut(s) 1025, 1681, 2288
Tsp45I GTSAC 3 cut(s) 400, 1757, 2263
TspGWI ACGGA 2 cut(s) 98, 271
TspRI CASTG 5 cut(s) 1428, 1827, 2638, 2652, 2755
VpaK11BI GGWCC 3 cut(s) 239, 697, 953
VspI ATTAAT 1 cut(s) 2325
XapI RAATTY 3 cut(s) 1101, 1721, 2810
XceI RCATGY 2 cut(s) 1022, 1906
XhoI CTCGAG 1 cut(s) 2402
XmiI GTMKAC 3 cut(s) 155, 173, 947
XmnI GAANNNNTTC 1 cut(s) 1212
XspI CTAG 6 cut(s) 363, 444, 1065, 2498, 2505, 2703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.