Rh4AG003300

chromosome transmission fidelity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000880
Physical Location & Seq
Forward (+)
553822 .. 565388
11567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG003300.1

Sequence Viewer

Length: 2976 bp
ATGGAGATGGAGATGGAGATGGACATGGACGAGCTCGAATTGCTTGAAGCCAACTATCAGCTCCACGAAGATTGCACGGAGCTCGAACCGCCGGAACCCTATCCAGAAGAAGAAGACCAACATCCTACCGGTTCCAAATCGCCGCCGTCGACTGACCACCAGCAGTCTACTGAAACCCAAATCAACGGCCACAAGCGTTTGCGACCAGAAGACGAAACTGCCGAAGCTCCCGGACCATCTGACGAGAAACGGAGCAGGATCGAAGATGAGGATTGGCTTCGATACTCGCCGCCACACCAGATCGATCCTGTTGTTGAAGAAACAAGTGCTGATCTTGTGGAGGAGAAGATTGTGTCTAGGTATGCCTCCGAGATCGACGGTGATTTCATTCCGGTGACGGCGCCGGGTTTGGGCGATAGGGTTTATGCCAAGATTTCTAGGGTGGAGATGGAGGAGCGTCCACAGAGATTGCATGGAACTGGACAATCTCAATCTGGAGGTCTCATTTCGGAACCTATTGATGTTCTACTGCAAAGACTGGAGCAAGAGGCATTTACAAGGGCCTTGCAAGCCAGTTCCAGAGGTCAAAGTGATGTGATTCTTCCCGAAACACCAGTTGTGCATGAACGACTTTGGGTGGATAAATATGCTCCAAACTCATTTACTGAGCTTCTCAGTGATGAACAGACAAATCGAGAGGTCCTGCTTTGGCTAAAACAATGGGATTCTTGTGTTTTCGGATCAGAGATTAGGAGCACATCAGATGAGGTTTTGTCTGCTTTAAAACGACATTCTTCTATCACTCAACATCAAAAACTTTCCGAGTCAAAGTTTCCAAGAAGTAACAGAGGATCCAGATGGAATAATGAAAAAATTAAGCATTTCAATGGTATGAATCATGAAAATACTAATTCAAAAAGCGTTCAAGAGTTGTCAAACAATTCCCGGTCTACTGGTCCGCCAGAACAAAAGATCCTCTTACTTTGTGGCCCACCAGGGCTCGGAAAGACTACACTTGCACATGTGGCTGCAAAGCATTGTGGATACCGAGTGGTGGAGGTGAATGCTAGTGATGATCGATCATCATCAACTATTGGAGCTAAAATTCTTGATGTTGTTCAGATGAACTCAGTCTCAGCCGACTCAAGGCCAAAGTGTTTGGTGATTGACGAAATAGATGGGGCACTTGGTGACGGAAAAGGTGCGGTTGAAGTCATTCTAAAAATGGTTTCTGCTGATAAGAAGTCTGATATGGAGAAGGAAAATGTTAATAAAGAACAAACATCAGGAAGGGCATCTTCAAAAAAGGGGCGGAAATCTGCATCCTTGTTAAGACCTATTATTTGCATATGCAATGACCTGTACGCACCTTCGTTGAGACCATTACGTCAGATAGCGAAGGTTCATGTTTTTGTTCAACCAACAGTGAATCGAGTGGTGAGCAGGCTTAAATATATATGTAACAAGGAAGGAATGAAAACAAGTTCCATTGCACTTACTGTACTTGCAGAGCATACAGAATGCGATATACGTTCATGCTTGAACACTCTTCAGTTCCTGAACAAGAAGAAGGAAGCACTCAACGCTTGGGATATTGGCTCTCAAGTGGTTGGTCGAAAGGATATGTCAAGAGGTGTGTTTGATGTCTGGAAAGAGATCTTCCAAAAGAGAAAACCGAAGAGGCAGCAAAGAACAAATAACAGTTGTGGAATAATATCAAGTGAATTCGACTCTTTGCATTCTCTCATTTCTCACCGTGGTGACTATGATTTGATTGTGGATGGTCTTCATGAAAACATTTTGCATCTTCCTTATCATGATCCAGTGATGCAAAAGACTGTCAAATGCTTGAATAGCCTTGGTGTCTCTGACCTTATGAACAAATATATTATGCGTACACAACACATGTCCCTTTATGCTTATCAGCCTGCTATTGCCATAATTGTACATCGTTTAGTAGCCCAAGTGCAGAGACCGAATATTGAGTGGCCAAAATCTTATTATAGGTACCGGACAATGTTAATGGAAAAAGTGGACAGTTTGAAGTCTTGGTACAACACAATTCCACCATCTATTTCAAGGCATTTGTCAATTAAGTCCTTTGTAGAAGACTCAATTTCATTGCTGTTACACATCCTATCACCCCCTACTCTAAGGCTGGCTGCATTGCACTTATTATCAGAGAAGGAGAAGAATGATCTGGCTCAGTTAGTTAGCACGATGGTCTCCTATTCTGTAACACATAGAAGGATCAAAGCTGATCCTGTGACTGGCAATCTCGGGCATCAAGCAGCTGATGTGACGGAGCTGTCTTTTGATCCCCCCATTAATGGCTTTGTTAACTTCCAGGGCTACAGATCTGGCCATCATGTACTTGCCTCAACTATGAAACAGATGTTGGCGCACGAGGTTGAAAAGCAAAGGATTTTGCAAGCAAGCATTGGGAGATCTGCACAGTTGACAGATGGATACAACAAGGAAAACCATGCTTCTTTAAGGCTAGAAACTAGGAGATTACAATCTGGTAGAGCTGATCATTTAGGTGCATCTGCTGTGAACAATGGAAAGTCAGAAAGCATGTCATATATGACACAATCAAATCCCAGTATTTCCGGTGTTTTACCTAACTTGGGCACTGGGAATACCCCAGTGAGTACAAAGTTAAACTCTTCTGGATGTATGAGAAAGCCGTCTGGTGGTTCCTCTAGTTTCTTTGATAGGTATTATCTATTATTCTATACTATGTGTACATTGGTAGTTTTTTCTCTTATGATCATCAATGGGTCCACTACGTCCACTAGTAAACATAATTATTGTCTTCTTGGTCTCATCTCCTCTTGTATACTTGAAAACTGGTTTAGAAAGCTTGGTAAAGGTTCTCAGAACACTGCTGAGGCTGTGCGGAAGGAAGCAACCTCTGAGAGAGATTCACGTCCTTTGGTCTTTAAATTTAATGAGGTGCGTAGTCATTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

991

Amino Acids

111.22

Weight (kDa)

7.22

Isoelectric Point (pI)

52.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 326 - 410 1.4e-13 ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1 PF25361 477 - 528 7e-08 RFC1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1386, 2308
Acc65I GGTACC 1 cut(s) 2007
AccB1I GGYRCC 2 cut(s) 400, 2007
AccI GTMKAC 4 cut(s) 149, 167, 950, 2842
AciI CCGC 7 cut(s) 89, 143, 290, 959, 1205, 1312, 2902
AcoI YGGCCR 3 cut(s) 187, 1988, 2362
AcsI RAATTY 3 cut(s) 1104, 1724, 2948
AcuI CTGAAG 1 cut(s) 1535
AcyI GRCGYC 1 cut(s) 401
AdeI CACNNNGTG 1 cut(s) 1190
AfaI GTAC 9 cut(s) 1364, 1503, 1897, 1947, 2009, 2054, 2373, 2656, 2749
AfiI CCNNNNNNNGG 8 cut(s) 410, 1001, 1054, 1146, 2270, 2330, 2630, 2696
AflIII ACRYGT 2 cut(s) 1021, 1905
AgeI ACCGGT 1 cut(s) 128
AhlI ACTAGT 1 cut(s) 2798
AjiI CACGTC 1 cut(s) 2933
AjnI CCWGG 2 cut(s) 994, 2346
AjuI GAANNNNNNNTTGG 2 cut(s) 2381, 2413
AleI CACNNNNGTG 1 cut(s) 1758
AloI GAACNNNNNNTCC 2 cut(s) 957, 989
Alw21I GWGCWC 3 cut(s) 36, 84, 758
Alw26I GTCTC 7 cut(s) 506, 1138, 1372, 1870, 1966, 2230, 2831
AlwNI CAGNNNCTG 1 cut(s) 1558
Ama87I CYCGRG 1 cut(s) 2279
AoxI GGCC 6 cut(s) 187, 561, 988, 1148, 1988, 2362
ApeKI GCWGC 4 cut(s) 1028, 1684, 2162, 2291
ApoI RAATTY 3 cut(s) 1104, 1724, 2948
ArsI GACNNNNNNTTYG 2 cut(s) 1326, 1358
AseI ATTAAT 1 cut(s) 2328
AsiGI ACCGGT 1 cut(s) 128
Asp700I GAANNNNTTC 1 cut(s) 1215
Asp718I GGTACC 1 cut(s) 2007
AspLEI GCGC 2 cut(s) 403, 2404
AspS9I GGNCC 6 cut(s) 233, 561, 700, 956, 989, 2784
AsuC2I CCSGG 3 cut(s) 231, 405, 946
AsuHPI GGTGA 9 cut(s) 392, 406, 1072, 1174, 1202, 1450, 1745, 1772, 2133
AvaI CYCGRG 1 cut(s) 2279
AvaII GGWCC 4 cut(s) 233, 700, 956, 2784
BaeGI GKGCMC 2 cut(s) 1186, 2636
BalI TGGCCA 2 cut(s) 1990, 2364
BamHI GGATCC 1 cut(s) 851
BanI GGYRCC 2 cut(s) 400, 2007
BanII GRGCYC 3 cut(s) 36, 84, 1002
BarI GAAGNNNNNNTAC 2 cut(s) 2036, 2068
BauI CACGAG 1 cut(s) 2405
BbsI GAAGAC 5 cut(s) 120, 216, 1778, 2115, 2810
Bbv12I GWGCWC 3 cut(s) 36, 84, 758
BbvCI CCTCAGC 1 cut(s) 2892
BbvI GCAGC 4 cut(s) 1015, 1696, 2149, 2303
BceAI ACGGC 4 cut(s) 130, 202, 414, 2674
BcgI CGANNNNNNTGC 2 cut(s) 64, 98
BciT130I CCWGG 2 cut(s) 996, 2348
BciVI GTATCC 2 cut(s) 1037, 2462
BclI TGATCA 2 cut(s) 2533, 2772
BcnI CCSGG 3 cut(s) 231, 405, 946
BcoDI GTCTC 7 cut(s) 506, 1138, 1372, 1870, 1966, 2230, 2831
BcuI ACTAGT 1 cut(s) 2798
BfaI CTAG 7 cut(s) 357, 438, 1068, 2501, 2508, 2706, 2799
BfmI CTRYAG 1 cut(s) 2353
BfoI RGCGCY 1 cut(s) 404
BfuI GTATCC 2 cut(s) 1037, 2462
BglII AGATCT 3 cut(s) 1656, 2357, 2447
BisI GCNGC 6 cut(s) 143, 290, 1029, 1685, 2163, 2292
BlsI GCNGC 6 cut(s) 144, 291, 1030, 1686, 2164, 2293
Bme1390I CCNGG 5 cut(s) 231, 405, 946, 996, 2348
Bme18I GGWCC 4 cut(s) 233, 700, 956, 2784
BmeT110I CYCGRG 1 cut(s) 2279
BmgBI CACGTC 1 cut(s) 2933
BmgT120I GGNCC 6 cut(s) 233, 561, 700, 956, 989, 2784
BmiI GGNNCC 8 cut(s) 96, 133, 402, 513, 853, 2009, 2701, 2785
BmrFI CCNGG 5 cut(s) 231, 405, 946, 996, 2348
BmrI ACTGGG 3 cut(s) 2598, 2642, 2646
BmsI GCATC 6 cut(s) 1304, 1331, 1813, 1818, 2293, 2555
BmuI ACTGGG 3 cut(s) 2598, 2642, 2646
BpiI GAAGAC 5 cut(s) 120, 216, 1778, 2115, 2810
BpmI CTGGAG 2 cut(s) 516, 560
Bpu10I CCTNAGC 1 cut(s) 2892
BpuEI CTTGAG 2 cut(s) 1129, 1587
BpuMI CCSGG 3 cut(s) 231, 405, 946
Bsa29I ATCGAT 2 cut(s) 303, 1078
BsaBI GATNNNNATC 2 cut(s) 1084, 2518
BsaHI GRCGYC 1 cut(s) 401
BsaI GGTCTC 5 cut(s) 506, 1372, 1966, 2230, 2831
BsaJI CCNNGG 4 cut(s) 995, 1756, 1858, 2347
BsaWI WCCGGW 4 cut(s) 128, 391, 2010, 2612
Bsc4I CCNNNNNNNGG 8 cut(s) 410, 1001, 1054, 1146, 2270, 2330, 2630, 2696
Bse118I RCCGGY 1 cut(s) 128
Bse3DI GCAATG 4 cut(s) 1360, 1488, 2120, 2165
Bse8I GATNNNNATC 2 cut(s) 1084, 2518
BseBI CCWGG 2 cut(s) 996, 2348
BseCI ATCGAT 2 cut(s) 303, 1078
BseDI CCNNGG 4 cut(s) 995, 1756, 1858, 2347
BseGI GGATG 5 cut(s) 121, 1322, 1786, 2133, 2681
BseJI GATNNNNATC 2 cut(s) 1084, 2518
BseLI CCNNNNNNNGG 8 cut(s) 410, 1001, 1054, 1146, 2270, 2330, 2630, 2696
BseMI GCAATG 4 cut(s) 1360, 1488, 2120, 2165
BseMII CTCAG 8 cut(s) 657, 688, 1143, 1149, 2219, 2883, 2894, 2910
BseRI GAGGAG 3 cut(s) 356, 467, 2824
BseSI GKGCMC 2 cut(s) 1186, 2636
BseXI GCAGC 4 cut(s) 1015, 1696, 2149, 2303
BsgI GTGCAG 2 cut(s) 1988, 2436
BshFI GGCC 6 cut(s) 189, 563, 990, 1150, 1990, 2364
BshNI GGYRCC 2 cut(s) 400, 2007
BshTI ACCGGT 1 cut(s) 128
BshVI ATCGAT 2 cut(s) 303, 1078
BsiHKAI GWGCWC 3 cut(s) 36, 84, 758
BsiHKCI CYCGRG 1 cut(s) 2279
BsiSI CCGG 8 cut(s) 92, 129, 231, 392, 404, 946, 2011, 2613
BslFI GGGAC 1 cut(s) 1894
BslI CCNNNNNNNGG 8 cut(s) 410, 1001, 1054, 1146, 2270, 2330, 2630, 2696
BsmAI GTCTC 7 cut(s) 506, 1138, 1372, 1870, 1966, 2230, 2831
BsmFI GGGAC 1 cut(s) 1894
BsmI GAATGC 3 cut(s) 1069, 1526, 1738
BsnI GGCC 6 cut(s) 189, 563, 990, 1150, 1990, 2364
Bso31I GGTCTC 5 cut(s) 506, 1372, 1966, 2230, 2831
BsoBI CYCGRG 1 cut(s) 2279
Bsp1286I GDGCHC 6 cut(s) 36, 84, 758, 1002, 1186, 2636
Bsp1407I TGTACA 2 cut(s) 1945, 2747
BspACI CCGC 7 cut(s) 89, 143, 290, 959, 1205, 1312, 2902
BspANI GGCC 6 cut(s) 189, 563, 990, 1150, 1990, 2364
BspCNI CTCAG 8 cut(s) 658, 687, 1142, 1148, 2218, 2884, 2893, 2911
BspDI ATCGAT 2 cut(s) 303, 1078
BspHI TCATGA 3 cut(s) 898, 1789, 1816
BspLI GGNNCC 8 cut(s) 96, 133, 402, 513, 853, 2009, 2701, 2785
BspT107I GGYRCC 2 cut(s) 400, 2007
BspTNI GGTCTC 5 cut(s) 506, 1372, 1966, 2230, 2831
BsrDI GCAATG 4 cut(s) 1360, 1488, 2120, 2165
BsrFI RCCGGY 1 cut(s) 128
BsrGI TGTACA 2 cut(s) 1945, 2747
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 4 cut(s) 995, 1756, 1858, 2347
BssNAI GTATAC 1 cut(s) 2843
BssNI GRCGYC 1 cut(s) 401
BssSI CACGAG 1 cut(s) 2405
BssT1I CCWWGG 1 cut(s) 1858
Bst1107I GTATAC 1 cut(s) 2843
Bst2BI CACGAG 1 cut(s) 2405
Bst2UI CCWGG 2 cut(s) 996, 2348
Bst4CI ACNGT 8 cut(s) 380, 1426, 1501, 1703, 1757, 1840, 2039, 2457
Bst6I CTCTTC 3 cut(s) 1554, 1673, 2674
BstACI GRCGYC 1 cut(s) 401
BstAUI TGTACA 2 cut(s) 1945, 2747
BstC8I GCNNGC 6 cut(s) 570, 1445, 1929, 2160, 2433, 2437
BstDEI CTNAG 9 cut(s) 666, 674, 1129, 1135, 2153, 2205, 2880, 2892, 2919
BstDSI CCRYGG 1 cut(s) 1756
BstF5I GGATG 5 cut(s) 121, 1322, 1786, 2133, 2681
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 2 cut(s) 403, 2404
BstMAI GTCTC 7 cut(s) 506, 1138, 1372, 1870, 1966, 2230, 2831
BstMWI GCNNNNNNNGC 6 cut(s) 40, 88, 569, 1025, 1583, 1854
BstNI CCWGG 2 cut(s) 996, 2348
BstNSI RCATGY 3 cut(s) 1025, 1909, 2581
BstSCI CCNGG 5 cut(s) 229, 403, 944, 994, 2346
BstSFI CTRYAG 1 cut(s) 2353
BstSLI GKGCMC 2 cut(s) 1186, 2636
BstV1I GCAGC 4 cut(s) 1015, 1696, 2149, 2303
BstV2I GAAGAC 5 cut(s) 120, 216, 1778, 2115, 2810
BstX2I RGATCY 5 cut(s) 851, 972, 1656, 2357, 2447
BstYI RGATCY 5 cut(s) 851, 972, 1656, 2357, 2447
BstZ17I GTATAC 1 cut(s) 2843
Bsu15I ATCGAT 2 cut(s) 303, 1078
BsuI GTATCC 2 cut(s) 1037, 2462
BsuRI GGCC 6 cut(s) 189, 563, 990, 1150, 1990, 2364
BsuTUI ATCGAT 2 cut(s) 303, 1078
BtgI CCRYGG 1 cut(s) 1756
BtrI CACGTC 1 cut(s) 2933
BtsCI GGATG 5 cut(s) 121, 1322, 1786, 2133, 2681
BtsI GCAGTG 1 cut(s) 2886
BtsIMutI CAGTG 6 cut(s) 682, 1431, 1830, 2634, 2655, 2886
Cac8I GCNNGC 6 cut(s) 570, 1445, 1929, 2160, 2433, 2437
CaiI CAGNNNCTG 1 cut(s) 1558
CciI TCATGA 3 cut(s) 898, 1789, 1816
CfoI GCGC 2 cut(s) 403, 2404
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 6 cut(s) 233, 561, 700, 956, 989, 2784
ClaI ATCGAT 2 cut(s) 303, 1078
CseI GACGC 1 cut(s) 446
Csp6I GTAC 9 cut(s) 1363, 1502, 1896, 1946, 2008, 2053, 2372, 2655, 2748
CspAI ACCGGT 1 cut(s) 128
CspCI CAANNNNNGTGG 4 cut(s) 53, 88, 450, 485
CviQI GTAC 9 cut(s) 1363, 1502, 1896, 1946, 2008, 2053, 2372, 2655, 2748
DdeI CTNAG 9 cut(s) 666, 674, 1129, 1135, 2153, 2205, 2880, 2892, 2919
DinI GGCGCC 1 cut(s) 402
DraI TTTAAA 2 cut(s) 783, 2947
DraIII CACNNNGTG 1 cut(s) 1190
DrdI GACNNNNNNGTC 2 cut(s) 1386, 2308
DseDI GACNNNNNNGTC 2 cut(s) 1386, 2308
EaeI YGGCCR 3 cut(s) 187, 1988, 2362
Eam1104I CTCTTC 3 cut(s) 1554, 1673, 2674
EarI CTCTTC 3 cut(s) 1554, 1673, 2674
EciI GGCGGA 2 cut(s) 948, 1327
Ecl136II GAGCTC 2 cut(s) 34, 82
Eco130I CCWWGG 1 cut(s) 1858
Eco24I GRGCYC 3 cut(s) 36, 84, 1002
Eco31I GGTCTC 5 cut(s) 506, 1372, 1966, 2230, 2831
Eco47I GGWCC 4 cut(s) 233, 700, 956, 2784
Eco53kI GAGCTC 2 cut(s) 34, 82
Eco57I CTGAAG 1 cut(s) 1535
Eco88I CYCGRG 1 cut(s) 2279
EcoICRI GAGCTC 2 cut(s) 34, 82
EcoO109I RGGNCCY 2 cut(s) 561, 700
EcoRI GAATTC 1 cut(s) 1724
EcoRII CCWGG 2 cut(s) 994, 2346
EcoT14I CCWWGG 1 cut(s) 1858
EcoT38I GRGCYC 3 cut(s) 36, 84, 1002
EgeI GGCGCC 1 cut(s) 402
EheI GGCGCC 1 cut(s) 402
ErhI CCWWGG 1 cut(s) 1858
FalI AAGNNNNNCTT 4 cut(s) 962, 994, 1282, 1314
FaqI GGGAC 1 cut(s) 1894
FauNDI CATATG 1 cut(s) 1349
FbaI TGATCA 2 cut(s) 2533, 2772
FblI GTMKAC 4 cut(s) 149, 167, 950, 2842
Fnu4HI GCNGC 6 cut(s) 143, 290, 1029, 1685, 2163, 2292
FokI GGATG 5 cut(s) 108, 1309, 1793, 2120, 2688
FriOI GRGCYC 3 cut(s) 36, 84, 1002
Fsp4HI GCNGC 6 cut(s) 143, 290, 1029, 1685, 2163, 2292
FspBI CTAG 7 cut(s) 357, 438, 1068, 2501, 2508, 2706, 2799
GlaI GCGC 2 cut(s) 402, 2403
GluI GCNGC 6 cut(s) 143, 290, 1029, 1685, 2163, 2292
GsuI CTGGAG 2 cut(s) 516, 560
HaeII RGCGCY 1 cut(s) 404
HaeIII GGCC 6 cut(s) 189, 563, 990, 1150, 1990, 2364
HapII CCGG 8 cut(s) 92, 129, 231, 392, 404, 946, 2011, 2613
HgaI GACGC 1 cut(s) 446
HhaI GCGC 2 cut(s) 403, 2404
Hin1I GRCGYC 1 cut(s) 401
Hin6I GCGC 2 cut(s) 401, 2402
HinP1I GCGC 2 cut(s) 401, 2402
HincII GTYRAC 3 cut(s) 150, 2341, 2460
HindII GTYRAC 3 cut(s) 150, 2341, 2460
HindIII AAGCTT 1 cut(s) 2864
HinfI GANTC 9 cut(s) 598, 725, 824, 895, 1142, 1429, 1730, 2111, 2927
HpaI GTTAAC 1 cut(s) 2341
HpaII CCGG 8 cut(s) 92, 129, 231, 392, 404, 946, 2011, 2613
HphI GGTGA 9 cut(s) 392, 406, 1072, 1174, 1202, 1450, 1745, 1772, 2133
Hpy99I CGWCG 2 cut(s) 151, 380
HpyAV CCTTC 9 cut(s) 1252, 1284, 1380, 1393, 1463, 1564, 2179, 2241, 2899
HpyCH4III ACNGT 8 cut(s) 380, 1426, 1501, 1703, 1757, 1840, 2039, 2457
HpyCH4IV ACGT 4 cut(s) 1387, 1531, 2792, 2932
HpyF10VI GCNNNNNNNGC 6 cut(s) 40, 88, 569, 1025, 1583, 1854
HpyF3I CTNAG 9 cut(s) 666, 674, 1129, 1135, 2153, 2205, 2880, 2892, 2919
HpySE526I ACGT 4 cut(s) 1387, 1531, 2792, 2932
Hsp92I GRCGYC 1 cut(s) 401
HspAI GCGC 2 cut(s) 401, 2402
KasI GGCGCC 1 cut(s) 400
KpnI GGTACC 1 cut(s) 2011
Ksp22I TGATCA 2 cut(s) 2533, 2772
KspAI GTTAAC 1 cut(s) 2341
Lsp1109I GCAGC 4 cut(s) 1015, 1696, 2149, 2303
LweI GCATC 6 cut(s) 1304, 1331, 1813, 1818, 2293, 2555
MaeI CTAG 7 cut(s) 357, 438, 1068, 2501, 2508, 2706, 2799
MaeII ACGT 4 cut(s) 1387, 1531, 2792, 2932
MaeIII GTNAC 9 cut(s) 394, 842, 1190, 1460, 1760, 2127, 2236, 2266, 2299
MflI RGATCY 5 cut(s) 851, 972, 1656, 2357, 2447
MhlI GDGCHC 6 cut(s) 36, 84, 758, 1002, 1186, 2636
MlsI TGGCCA 2 cut(s) 1990, 2364
MluNI TGGCCA 2 cut(s) 1990, 2364
Mly113I GGCGCC 1 cut(s) 401
MlyI GAGTC 4 cut(s) 833, 1136, 1724, 2105
Mox20I TGGCCA 2 cut(s) 1990, 2364
MroXI GAANNNNTTC 1 cut(s) 1215
MscI TGGCCA 2 cut(s) 1990, 2364
MslI CAYNNNNRTG 4 cut(s) 392, 885, 1758, 2541
Msp20I TGGCCA 2 cut(s) 1990, 2364
MspA1I CMGCKG 1 cut(s) 2294
MspI CCGG 8 cut(s) 92, 129, 231, 392, 404, 946, 2011, 2613
MspR9I CCNGG 5 cut(s) 231, 405, 946, 996, 2348
Mva1269I GAATGC 3 cut(s) 1069, 1526, 1738
MvaI CCWGG 2 cut(s) 996, 2348
MwoI GCNNNNNNNGC 6 cut(s) 40, 88, 569, 1025, 1583, 1854
NarI GGCGCC 1 cut(s) 401
NciI CCSGG 3 cut(s) 231, 405, 946
NdeI CATATG 1 cut(s) 1349
NlaIV GGNNCC 8 cut(s) 96, 133, 402, 513, 853, 2009, 2701, 2785
NmuCI GTSAC 5 cut(s) 394, 1190, 1760, 2266, 2299
NspI RCATGY 3 cut(s) 1025, 1909, 2581
OliI CACNNNNGTG 1 cut(s) 1758
PagI TCATGA 3 cut(s) 898, 1789, 1816
PciI ACATGT 2 cut(s) 1021, 1905
PcsI WCGNNNNNNNCGW 2 cut(s) 146, 219
PctI GAATGC 3 cut(s) 1069, 1526, 1738
PdmI GAANNNNTTC 1 cut(s) 1215
PfeI GAWTC 5 cut(s) 598, 725, 895, 1429, 2927
PfoI TCCNGGA 1 cut(s) 229
PinAI ACCGGT 1 cut(s) 128
PkrI GCNGC 6 cut(s) 144, 291, 1030, 1686, 2164, 2293
PleI GAGTC 4 cut(s) 832, 1136, 1724, 2105
PluTI GGCGCC 1 cut(s) 404
PpsI GAGTC 4 cut(s) 832, 1136, 1724, 2105
PpuMI RGGWCCY 1 cut(s) 700
PscI ACATGT 2 cut(s) 1021, 1905
PshBI ATTAAT 1 cut(s) 2328
Psp124BI GAGCTC 2 cut(s) 36, 84
Psp5II RGGWCCY 1 cut(s) 700
Psp6I CCWGG 2 cut(s) 994, 2346
PspGI CCWGG 2 cut(s) 994, 2346
PspN4I GGNNCC 8 cut(s) 96, 133, 402, 513, 853, 2009, 2701, 2785
PspPI GGNCC 6 cut(s) 233, 561, 700, 956, 989, 2784
PspPPI RGGWCCY 1 cut(s) 700
PstNI CAGNNNCTG 1 cut(s) 1558
PsuI RGATCY 5 cut(s) 851, 972, 1656, 2357, 2447
PvuII CAGCTG 1 cut(s) 2294
RsaI GTAC 9 cut(s) 1364, 1503, 1897, 1947, 2009, 2054, 2373, 2656, 2749
RsaNI GTAC 9 cut(s) 1363, 1502, 1896, 1946, 2008, 2053, 2372, 2655, 2748
RseI CAYNNNNRTG 4 cut(s) 392, 885, 1758, 2541
SacI GAGCTC 2 cut(s) 36, 84
SalI GTCGAC 1 cut(s) 148
SatI GCNGC 6 cut(s) 143, 290, 1029, 1685, 2163, 2292
Sau96I GGNCC 6 cut(s) 233, 561, 700, 956, 989, 2784
SchI GAGTC 4 cut(s) 833, 1136, 1724, 2105
ScrFI CCNGG 5 cut(s) 231, 405, 946, 996, 2348
SduI GDGCHC 6 cut(s) 36, 84, 758, 1002, 1186, 2636
SfaNI GCATC 6 cut(s) 1304, 1331, 1813, 1818, 2293, 2555
SfcI CTRYAG 1 cut(s) 2353
SfoI GGCGCC 1 cut(s) 402
SinI GGWCC 4 cut(s) 233, 700, 956, 2784
SmiMI CAYNNNNRTG 4 cut(s) 392, 885, 1758, 2541
SmlI CTYRAG 2 cut(s) 1144, 1602
SmoI CTYRAG 2 cut(s) 1144, 1602
SpeI ACTAGT 1 cut(s) 2798
SsiI CCGC 7 cut(s) 89, 143, 290, 959, 1205, 1312, 2902
SspDI GGCGCC 1 cut(s) 400
SspI AATATT 1 cut(s) 1981
SspMI CTAG 7 cut(s) 357, 438, 1068, 2501, 2508, 2706, 2799
SstI GAGCTC 2 cut(s) 36, 84
StyD4I CCNGG 5 cut(s) 229, 403, 944, 994, 2346
StyI CCWWGG 1 cut(s) 1858
TaaI ACNGT 8 cut(s) 380, 1426, 1501, 1703, 1757, 1840, 2039, 2457
TaiI ACGT 4 cut(s) 1390, 1534, 2795, 2935
TaqII GACCGA 1 cut(s) 1990
TatI WGTACW 5 cut(s) 1501, 1945, 2371, 2654, 2747
TauI GCSGC 2 cut(s) 145, 292
TfiI GAWTC 5 cut(s) 598, 725, 895, 1429, 2927
TscAI CASTG 6 cut(s) 682, 1431, 1830, 2641, 2655, 2893
TseFI GTSAC 5 cut(s) 394, 1190, 1760, 2266, 2299
TseI GCWGC 4 cut(s) 1028, 1684, 2162, 2291
Tsp45I GTSAC 5 cut(s) 394, 1190, 1760, 2266, 2299
TspGWI ACGGA 4 cut(s) 92, 265, 1209, 2318
TspRI CASTG 6 cut(s) 682, 1431, 1830, 2641, 2655, 2893
VpaK11BI GGWCC 4 cut(s) 233, 700, 956, 2784
VspI ATTAAT 1 cut(s) 2328
XapI RAATTY 3 cut(s) 1104, 1724, 2948
XceI RCATGY 3 cut(s) 1025, 1909, 2581
XmiI GTMKAC 4 cut(s) 149, 167, 950, 2842
XmnI GAANNNNTTC 1 cut(s) 1215
XspI CTAG 7 cut(s) 357, 438, 1068, 2501, 2508, 2706, 2799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.