RchiOBHm_Chr4g0385211

chromosome transmission fidelity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000880
Physical Location & Seq
Forward (+)
667385 .. 678915
11531 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35872

Sequence Viewer

Length: 2847 bp
ATGGACATGGACATGGACGAGCTCGAATTGCTTGAAGCCAACTATCAGCTCCACGAAGATTGCACGGAGCTCGAACCGCCGGAACCCTATCCAGAAGAAGAAGACCAACATCCTACCGGTTCCAAATCGCCACCGTCGACTGACCACCAGCAGTCTACTGAAACCCAAATCAACGGCCACAAGCGTTTGCGACCAGAAGACGAAACTGCCGAAGCTCCCGGACCATCTGACGAGAAACGAAGCAGGATCGAAGATGAGGATTGGCTTCGATACTCGCCGCCACACCAGAGCGATCCTGTTGTTGAAGAAACAAGTGCTGATCTTGTGGAGGAGAAGATTGTGTCTAGGTATGCCTCCGAGATCGACGGTGATTTCATTCCGGTGACGGCGCCGGGTTTGGGCGATAGGGTTTATGCCAAGATTTCTAGGGTGGAGATGGAGGAGCGTCCACAGAGATTGCATGGAACTGGACAATCTCAATCTGGAGGTCTCATTTCGGAACCTATTGATGTTCTACTGCAAAGACTGGAGCAAGAGGCATTTACAAGGGCCTTGCAAGCCAGTTCCAGAGGTCAAAGTGATGTGATTCTTCCCGAAACACCAGTTGTGCATGAACGACTTTGGGTGGATAAATATGCTCCAAACTCATTTACTGAGCTTCTCAGCGATGAACAGACAAATCGTGAGGTCCTGCTTTGGCTAAAACAATGGGATTCTTGTGTTTTTGGATCAGAGATTAGGAGCACATCAGATGAGGTTTTGTCTGCTTTAAAACGACATTCTTCTATCACTCAACATCAAAAACTTTCCGAGTCAAAGTTTCCGAGAAGTAACAGAGGATCCAGATGGAATAATGAAAAAATTAAGCATTTCAATGGTATGAATCATGAAAATACTAATTCAAAAAGCGTTCAAGAGTTGTCAAACAATTCCCGGTCTACTGGTCCGCCAGAACAAAAGATCCTCTTACTTTGTGGCCCACCAGGGCTCGGAAAGACTACACTTGCACATGTGGCTGCAAAGCATTGTGGATACCGAGTGGTGGAGGTGAATGCTAGTGATGATCGATCATCATCAACTATTGGAGCTAAAATTCTTGATGTTGTTCAGATGAACTCAGTCTCAGCCGACTCAAGGCCAAAGTGTTTGGTGATTGACGAAATAGATGGGGCACTTGGTGACGGAAAAGGTGCGGTTGAAGTCATTCTAAAAATGGTTTCTGCTGATAAGAAGTCTGATATGGAGAAGGAAAATGTTAATAAAGAACAAACATCAGGAAAGGCATCTTCAAAAAAGGGGCGGAAATCTGCATCCTTGTTAAGACCTATTATTTGCATATGCAATGACCTATATGCACCTTCGTTGAGACCATTACGTCAGATAGCGAAGGTTCATGTTTTTGTTCAACCAACAGTGAATCGAGTGGTGAGCAGGCTTAAATATATATGTAACAAGGAAGGAATGAAAACAAGTTCCATTGCACTTACTGTACTTGCAGAGCATACAGAATGTGATATACGTTCATGCTTGAACACTCTTCAGTTCCTGAACAAGAAGAAGGAAGCACTCAACGCCTGGGATATTGGCTCTCAAGTGGTTGGTCGAAAGGATATGTCAAGAGGTGTGTTTGATGTCTGGAAAGAGATCTTCCAAAAGAGAAAACCGAAGAGGCAGCAAAGAACAAATAACAGTTGTGGAATAATATCTAGTGAATTTGACTCTTTGCATTCTCTCATTTCTCACCGTGGTGACTATGATTTGATTGTGGATGGTCTTCATGAAAATGTTTTGCATCTTCCTTATCATGATCCAGTGATGCAAAAGACTGTCAAATGCTTGAATAGCCTTGGTGTCTCTGACCTTATGAACAAATATATTATGCGTACACAACACATGTCCCTTTATGCTTATCAGCCTGTTATTGCCATAATTGTACATCGTTTAGTAGCCCAAGTGCAGAGACCGAATATTGAATGGCCAAAATCTTATTATAGGTACCGGACAATGTTAATGGAAAAAGTGGACAGTTTGAAGTCTTGGTACAACACAATTCCACCATCTATTTCAAGGCATTTTTCAATTAAGTCCTTTGTAGAAGACTCAATTTCATTGCTGTTACACATCCTATCACCCCCAACTCTAAGGCTGGCCTCATTGCACTTATTATCAGAGAAGGAGAAGAATGATCTGGCTCAGTTAGTTAGCACGATGGTCTCCTATTCTATAACACATAGAAGGATTAAAGCTGATCCTGTGACTGGCAATCTCGGGCATCAAGCAGCTGATGTGTCGGAGCTGTCTTTTGATCCCCCCATTAATGGCTTTGTTAACTTCCAGGGCTACAGATCTGGCCATCATGTACTTGCCTCAACTATGAAACAGATGTTGGCGCACGAGGTTGAAAAGCAAAGGATTTTGCAAGCAAGCATTGGGAGATCTGCACAGTTGACAGATGGATACAACAAGGAAAACCATGCTTCTTTAAGGCTAGAAACTAGGAGATTACAATCTGGTAGAGTTGATCATTTAGGTGCATCTGCTGTGAACAATGGAAAGTCAGAAAGCATGTCAAATCCCAGTAGCGGTGTTTTACCTAACTTGGGCACTGGGAATACCCCAGTGAGTACAAAGTTAAACTCTTCTGGATGTATGAGAAAGCCGTCTGGTGGTTCCTCTAGTTTCTTTGATAGGTTTAGAAAGCTTGGTAAAGGTTCTCAGAACACTGCTGAGGCTGTGCGGAAGGAAGCAACCTCTGAGAGAGATTCACGTCCTTTGGTCTTTAAATTTAATGAGGGCTTTACAAATGCAGTTAAAAGGCCAGTTCGTGTTCGGGAGTTTCTGACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

948

Amino Acids

106.27

Weight (kDa)

8.08

Isoelectric Point (pI)

52.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 322 - 406 1.4e-13 ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1 PF25361 473 - 524 6.6e-08 RFC1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1374
Acc65I GGTACC 1 cut(s) 1995
AccB1I GGYRCC 2 cut(s) 388, 1995
AccI GTMKAC 3 cut(s) 137, 155, 938
AciI CCGC 7 cut(s) 77, 278, 947, 1193, 1300, 2583, 2737
AclWI GGATC 9 cut(s) 254, 287, 736, 834, 847, 955, 1802, 2243, 2300
AcoI YGGCCR 3 cut(s) 175, 1976, 2350
AcsI RAATTY 3 cut(s) 1092, 1712, 2783
AcuI CTGAAG 1 cut(s) 1523
AcyI GRCGYC 1 cut(s) 389
AdeI CACNNNGTG 1 cut(s) 1178
AfaI GTAC 7 cut(s) 1491, 1885, 1935, 1997, 2042, 2361, 2626
AfiI CCNNNNNNNGG 9 cut(s) 398, 989, 1042, 1134, 2258, 2318, 2582, 2600, 2666
AflIII ACRYGT 2 cut(s) 1009, 1893
AgeI ACCGGT 1 cut(s) 116
AjiI CACGTC 1 cut(s) 2768
AjnI CCWGG 3 cut(s) 982, 1574, 2334
AjuI GAANNNNNNNTTGG 2 cut(s) 2369, 2401
AleI CACNNNNGTG 1 cut(s) 1746
AloI GAACNNNNNNTCC 2 cut(s) 945, 977
Alw21I GWGCWC 3 cut(s) 24, 72, 746
Alw26I GTCTC 6 cut(s) 494, 1126, 1360, 1858, 1954, 2218
AlwI GGATC 9 cut(s) 254, 287, 736, 834, 847, 955, 1802, 2243, 2300
AlwNI CAGNNNCTG 1 cut(s) 1546
Ama87I CYCGRG 1 cut(s) 2267
AoxI GGCC 8 cut(s) 175, 549, 976, 1136, 1976, 2148, 2350, 2816
ApeKI GCWGC 3 cut(s) 1016, 1672, 2279
ApoI RAATTY 3 cut(s) 1092, 1712, 2783
ArsI GACNNNNNNTTYG 2 cut(s) 1314, 1346
AseI ATTAAT 1 cut(s) 2316
AsiGI ACCGGT 1 cut(s) 116
Asp700I GAANNNNTTC 1 cut(s) 1203
Asp718I GGTACC 1 cut(s) 1995
AspLEI GCGC 2 cut(s) 391, 2392
AspS9I GGNCC 5 cut(s) 221, 549, 688, 944, 977
AsuC2I CCSGG 3 cut(s) 219, 393, 934
AsuHPI GGTGA 9 cut(s) 380, 394, 1060, 1162, 1190, 1438, 1733, 1760, 2121
AvaI CYCGRG 1 cut(s) 2267
AvaII GGWCC 3 cut(s) 221, 688, 944
BaeGI GKGCMC 2 cut(s) 1174, 2606
BalI TGGCCA 2 cut(s) 1978, 2352
BamHI GGATCC 1 cut(s) 839
BanI GGYRCC 2 cut(s) 388, 1995
BanII GRGCYC 3 cut(s) 24, 72, 990
BarI GAAGNNNNNNTAC 2 cut(s) 2024, 2056
BauI CACGAG 1 cut(s) 2393
BbsI GAAGAC 4 cut(s) 108, 204, 1766, 2103
Bbv12I GWGCWC 3 cut(s) 24, 72, 746
BbvCI CCTCAGC 1 cut(s) 2727
BbvI GCAGC 3 cut(s) 1003, 1684, 2291
BccI CCATC 9 cut(s) 232, 430, 840, 1160, 1763, 2065, 2203, 2361, 2447
BceAI ACGGC 3 cut(s) 190, 402, 2644
BcgI CGANNNNNNTGC 2 cut(s) 52, 86
BciT130I CCWGG 3 cut(s) 984, 1576, 2336
BciVI GTATCC 2 cut(s) 1025, 2450
BclI TGATCA 1 cut(s) 2521
BcnI CCSGG 3 cut(s) 219, 393, 934
BcoDI GTCTC 6 cut(s) 494, 1126, 1360, 1858, 1954, 2218
BfaI CTAG 7 cut(s) 345, 426, 1056, 1707, 2489, 2496, 2676
BfmI CTRYAG 1 cut(s) 2341
BfoI RGCGCY 1 cut(s) 392
BfuI GTATCC 2 cut(s) 1025, 2450
BglII AGATCT 3 cut(s) 1644, 2345, 2435
BisI GCNGC 4 cut(s) 278, 1017, 1673, 2280
BlsI GCNGC 4 cut(s) 279, 1018, 1674, 2281
Bme1390I CCNGG 6 cut(s) 219, 393, 934, 984, 1576, 2336
Bme18I GGWCC 3 cut(s) 221, 688, 944
BmeT110I CYCGRG 1 cut(s) 2267
BmgBI CACGTC 1 cut(s) 2768
BmgT120I GGNCC 5 cut(s) 221, 549, 688, 944, 977
BmiI GGNNCC 7 cut(s) 84, 121, 390, 501, 841, 1997, 2671
BmrFI CCNGG 6 cut(s) 219, 393, 934, 984, 1576, 2336
BmrI ACTGGG 3 cut(s) 2571, 2612, 2616
BmsI GCATC 6 cut(s) 1292, 1319, 1801, 1806, 2281, 2543
BmuI ACTGGG 3 cut(s) 2571, 2612, 2616
BpiI GAAGAC 4 cut(s) 108, 204, 1766, 2103
BpmI CTGGAG 2 cut(s) 504, 548
Bpu10I CCTNAGC 1 cut(s) 2727
BpuEI CTTGAG 2 cut(s) 1117, 1575
BpuMI CCSGG 3 cut(s) 219, 393, 934
Bsa29I ATCGAT 1 cut(s) 1066
BsaBI GATNNNNATC 2 cut(s) 1072, 2506
BsaHI GRCGYC 1 cut(s) 389
BsaI GGTCTC 4 cut(s) 494, 1360, 1954, 2218
BsaJI CCNNGG 5 cut(s) 983, 1575, 1744, 1846, 2335
BsaWI WCCGGW 3 cut(s) 116, 379, 1998
Bsc4I CCNNNNNNNGG 9 cut(s) 398, 989, 1042, 1134, 2258, 2318, 2582, 2600, 2666
Bse118I RCCGGY 1 cut(s) 116
Bse3DI GCAATG 4 cut(s) 1348, 1476, 2108, 2153
Bse8I GATNNNNATC 2 cut(s) 1072, 2506
BseBI CCWGG 3 cut(s) 984, 1576, 2336
BseCI ATCGAT 1 cut(s) 1066
BseDI CCNNGG 5 cut(s) 983, 1575, 1744, 1846, 2335
BseGI GGATG 5 cut(s) 109, 1310, 1774, 2121, 2651
BseJI GATNNNNATC 2 cut(s) 1072, 2506
BseLI CCNNNNNNNGG 9 cut(s) 398, 989, 1042, 1134, 2258, 2318, 2582, 2600, 2666
BseMI GCAATG 4 cut(s) 1348, 1476, 2108, 2153
BseMII CTCAG 8 cut(s) 645, 676, 1131, 1137, 2207, 2718, 2729, 2745
BseRI GAGGAG 2 cut(s) 344, 455
BseSI GKGCMC 2 cut(s) 1174, 2606
BseXI GCAGC 3 cut(s) 1003, 1684, 2291
BsgI GTGCAG 2 cut(s) 1976, 2424
BshFI GGCC 8 cut(s) 177, 551, 978, 1138, 1978, 2150, 2352, 2818
BshNI GGYRCC 2 cut(s) 388, 1995
BshTI ACCGGT 1 cut(s) 116
BshVI ATCGAT 1 cut(s) 1066
BsiHKAI GWGCWC 3 cut(s) 24, 72, 746
BsiHKCI CYCGRG 1 cut(s) 2267
BsiSI CCGG 7 cut(s) 80, 117, 219, 380, 392, 934, 1999
BslFI GGGAC 1 cut(s) 1882
BslI CCNNNNNNNGG 9 cut(s) 398, 989, 1042, 1134, 2258, 2318, 2582, 2600, 2666
BsmAI GTCTC 6 cut(s) 494, 1126, 1360, 1858, 1954, 2218
BsmFI GGGAC 1 cut(s) 1882
BsmI GAATGC 2 cut(s) 1057, 1726
BsnI GGCC 8 cut(s) 177, 551, 978, 1138, 1978, 2150, 2352, 2818
Bso31I GGTCTC 4 cut(s) 494, 1360, 1954, 2218
BsoBI CYCGRG 1 cut(s) 2267
Bsp1286I GDGCHC 6 cut(s) 24, 72, 746, 990, 1174, 2606
Bsp1407I TGTACA 1 cut(s) 1933
BspACI CCGC 7 cut(s) 77, 278, 947, 1193, 1300, 2583, 2737
BspANI GGCC 8 cut(s) 177, 551, 978, 1138, 1978, 2150, 2352, 2818
BspCNI CTCAG 8 cut(s) 646, 675, 1130, 1136, 2206, 2719, 2728, 2746
BspDI ATCGAT 1 cut(s) 1066
BspHI TCATGA 3 cut(s) 886, 1777, 1804
BspLI GGNNCC 7 cut(s) 84, 121, 390, 501, 841, 1997, 2671
BspPI GGATC 9 cut(s) 254, 287, 736, 834, 847, 955, 1802, 2243, 2300
BspT107I GGYRCC 2 cut(s) 388, 1995
BspTNI GGTCTC 4 cut(s) 494, 1360, 1954, 2218
BsrDI GCAATG 4 cut(s) 1348, 1476, 2108, 2153
BsrFI RCCGGY 1 cut(s) 116
BsrGI TGTACA 1 cut(s) 1933
BssAI RCCGGY 1 cut(s) 116
BssECI CCNNGG 5 cut(s) 983, 1575, 1744, 1846, 2335
BssNI GRCGYC 1 cut(s) 389
BssSI CACGAG 1 cut(s) 2393
BssT1I CCWWGG 1 cut(s) 1846
Bst2BI CACGAG 1 cut(s) 2393
Bst2UI CCWGG 3 cut(s) 984, 1576, 2336
Bst4CI ACNGT 9 cut(s) 135, 368, 1414, 1489, 1691, 1745, 1828, 2027, 2445
Bst6I CTCTTC 3 cut(s) 1542, 1661, 2644
BstACI GRCGYC 1 cut(s) 389
BstAUI TGTACA 1 cut(s) 1933
BstC8I GCNNGC 5 cut(s) 558, 1433, 2148, 2421, 2425
BstDEI CTNAG 9 cut(s) 654, 662, 1117, 1123, 2141, 2193, 2715, 2727, 2754
BstDSI CCRYGG 1 cut(s) 1744
BstF5I GGATG 5 cut(s) 109, 1310, 1774, 2121, 2651
BstH2I RGCGCY 1 cut(s) 392
BstHHI GCGC 2 cut(s) 391, 2392
BstMAI GTCTC 6 cut(s) 494, 1126, 1360, 1858, 1954, 2218
BstMWI GCNNNNNNNGC 6 cut(s) 28, 76, 557, 1013, 1571, 1842
BstNI CCWGG 3 cut(s) 984, 1576, 2336
BstNSI RCATGY 3 cut(s) 1013, 1897, 2569
BstSCI CCNGG 6 cut(s) 217, 391, 932, 982, 1574, 2334
BstSFI CTRYAG 1 cut(s) 2341
BstSLI GKGCMC 2 cut(s) 1174, 2606
BstV1I GCAGC 3 cut(s) 1003, 1684, 2291
BstV2I GAAGAC 4 cut(s) 108, 204, 1766, 2103
BstX2I RGATCY 5 cut(s) 839, 960, 1644, 2345, 2435
BstYI RGATCY 5 cut(s) 839, 960, 1644, 2345, 2435
Bsu15I ATCGAT 1 cut(s) 1066
BsuI GTATCC 2 cut(s) 1025, 2450
BsuRI GGCC 8 cut(s) 177, 551, 978, 1138, 1978, 2150, 2352, 2818
BsuTUI ATCGAT 1 cut(s) 1066
BtgI CCRYGG 1 cut(s) 1744
BtgZI GCGATG 1 cut(s) 681
BtrI CACGTC 1 cut(s) 2768
BtsCI GGATG 5 cut(s) 109, 1310, 1774, 2121, 2651
BtsI GCAGTG 1 cut(s) 2721
BtsIMutI CAGTG 5 cut(s) 1419, 1818, 2604, 2625, 2721
Cac8I GCNNGC 5 cut(s) 558, 1433, 2148, 2421, 2425
CaiI CAGNNNCTG 1 cut(s) 1546
CciI TCATGA 3 cut(s) 886, 1777, 1804
CfoI GCGC 2 cut(s) 391, 2392
Cfr10I RCCGGY 1 cut(s) 116
Cfr13I GGNCC 5 cut(s) 221, 549, 688, 944, 977
ClaI ATCGAT 1 cut(s) 1066
CseI GACGC 1 cut(s) 434
Csp6I GTAC 7 cut(s) 1490, 1884, 1934, 1996, 2041, 2360, 2625
CspAI ACCGGT 1 cut(s) 116
CspCI CAANNNNNGTGG 4 cut(s) 41, 76, 438, 473
CviQI GTAC 7 cut(s) 1490, 1884, 1934, 1996, 2041, 2360, 2625
DdeI CTNAG 9 cut(s) 654, 662, 1117, 1123, 2141, 2193, 2715, 2727, 2754
DinI GGCGCC 1 cut(s) 390
DraI TTTAAA 2 cut(s) 771, 2782
DraIII CACNNNGTG 1 cut(s) 1178
DrdI GACNNNNNNGTC 1 cut(s) 1374
DseDI GACNNNNNNGTC 1 cut(s) 1374
EaeI YGGCCR 3 cut(s) 175, 1976, 2350
Eam1104I CTCTTC 3 cut(s) 1542, 1661, 2644
EarI CTCTTC 3 cut(s) 1542, 1661, 2644
EciI GGCGGA 2 cut(s) 936, 1315
Ecl136II GAGCTC 2 cut(s) 22, 70
Eco130I CCWWGG 1 cut(s) 1846
Eco24I GRGCYC 3 cut(s) 24, 72, 990
Eco31I GGTCTC 4 cut(s) 494, 1360, 1954, 2218
Eco47I GGWCC 3 cut(s) 221, 688, 944
Eco53kI GAGCTC 2 cut(s) 22, 70
Eco57I CTGAAG 1 cut(s) 1523
Eco88I CYCGRG 1 cut(s) 2267
EcoICRI GAGCTC 2 cut(s) 22, 70
EcoO109I RGGNCCY 2 cut(s) 549, 688
EcoRII CCWGG 3 cut(s) 982, 1574, 2334
EcoT14I CCWWGG 1 cut(s) 1846
EcoT38I GRGCYC 3 cut(s) 24, 72, 990
EgeI GGCGCC 1 cut(s) 390
EheI GGCGCC 1 cut(s) 390
ErhI CCWWGG 1 cut(s) 1846
FalI AAGNNNNNCTT 2 cut(s) 950, 982
FaqI GGGAC 1 cut(s) 1882
FauNDI CATATG 1 cut(s) 1337
FbaI TGATCA 1 cut(s) 2521
FblI GTMKAC 3 cut(s) 137, 155, 938
Fnu4HI GCNGC 4 cut(s) 278, 1017, 1673, 2280
FokI GGATG 5 cut(s) 96, 1297, 1781, 2108, 2658
FriOI GRGCYC 3 cut(s) 24, 72, 990
Fsp4HI GCNGC 4 cut(s) 278, 1017, 1673, 2280
FspBI CTAG 7 cut(s) 345, 426, 1056, 1707, 2489, 2496, 2676
GlaI GCGC 2 cut(s) 390, 2391
GluI GCNGC 4 cut(s) 278, 1017, 1673, 2280
GsuI CTGGAG 2 cut(s) 504, 548
HaeII RGCGCY 1 cut(s) 392
HaeIII GGCC 8 cut(s) 177, 551, 978, 1138, 1978, 2150, 2352, 2818
HapII CCGG 7 cut(s) 80, 117, 219, 380, 392, 934, 1999
HgaI GACGC 1 cut(s) 434
HhaI GCGC 2 cut(s) 391, 2392
Hin1I GRCGYC 1 cut(s) 389
Hin6I GCGC 2 cut(s) 389, 2390
HinP1I GCGC 2 cut(s) 389, 2390
HincII GTYRAC 3 cut(s) 138, 2329, 2448
HindII GTYRAC 3 cut(s) 138, 2329, 2448
HindIII AAGCTT 1 cut(s) 2699
HinfI GANTC 9 cut(s) 586, 713, 812, 883, 1130, 1417, 1718, 2099, 2762
HpaI GTTAAC 1 cut(s) 2329
HpaII CCGG 7 cut(s) 80, 117, 219, 380, 392, 934, 1999
HphI GGTGA 9 cut(s) 380, 394, 1060, 1162, 1190, 1438, 1733, 1760, 2121
Hpy166II GTNNAC 9 cut(s) 138, 156, 449, 939, 1886, 2023, 2329, 2448, 2545
Hpy8I GTNNAC 9 cut(s) 138, 156, 449, 939, 1886, 2023, 2329, 2448, 2545
Hpy99I CGWCG 2 cut(s) 139, 368
HpyAV CCTTC 8 cut(s) 1240, 1368, 1381, 1451, 1552, 2167, 2229, 2734
HpyCH4III ACNGT 9 cut(s) 135, 368, 1414, 1489, 1691, 1745, 1828, 2027, 2445
HpyCH4IV ACGT 4 cut(s) 1375, 1519, 2767, 2843
HpyF10VI GCNNNNNNNGC 6 cut(s) 28, 76, 557, 1013, 1571, 1842
HpyF3I CTNAG 9 cut(s) 654, 662, 1117, 1123, 2141, 2193, 2715, 2727, 2754
HpySE526I ACGT 4 cut(s) 1375, 1519, 2767, 2843
Hsp92I GRCGYC 1 cut(s) 389
HspAI GCGC 2 cut(s) 389, 2390
KasI GGCGCC 1 cut(s) 388
KpnI GGTACC 1 cut(s) 1999
Ksp22I TGATCA 1 cut(s) 2521
KspAI GTTAAC 1 cut(s) 2329
LmnI GCTCC 9 cut(s) 54, 67, 220, 442, 529, 643, 741, 1085, 2293
Lsp1109I GCAGC 3 cut(s) 1003, 1684, 2291
LweI GCATC 6 cut(s) 1292, 1319, 1801, 1806, 2281, 2543
MaeI CTAG 7 cut(s) 345, 426, 1056, 1707, 2489, 2496, 2676
MaeII ACGT 4 cut(s) 1375, 1519, 2767, 2843
MaeIII GTNAC 7 cut(s) 382, 830, 1178, 1448, 1748, 2115, 2254
MflI RGATCY 5 cut(s) 839, 960, 1644, 2345, 2435
MhlI GDGCHC 6 cut(s) 24, 72, 746, 990, 1174, 2606
MlsI TGGCCA 2 cut(s) 1978, 2352
MluNI TGGCCA 2 cut(s) 1978, 2352
Mly113I GGCGCC 1 cut(s) 389
MlyI GAGTC 4 cut(s) 821, 1124, 1712, 2093
MmeI TCCRAC 1 cut(s) 2271
Mox20I TGGCCA 2 cut(s) 1978, 2352
MroXI GAANNNNTTC 1 cut(s) 1203
MscI TGGCCA 2 cut(s) 1978, 2352
MslI CAYNNNNRTG 6 cut(s) 11, 380, 873, 1746, 1782, 2529
Msp20I TGGCCA 2 cut(s) 1978, 2352
MspA1I CMGCKG 1 cut(s) 2282
MspI CCGG 7 cut(s) 80, 117, 219, 380, 392, 934, 1999
MspR9I CCNGG 6 cut(s) 219, 393, 934, 984, 1576, 2336
Mva1269I GAATGC 2 cut(s) 1057, 1726
MvaI CCWGG 3 cut(s) 984, 1576, 2336
MwoI GCNNNNNNNGC 6 cut(s) 28, 76, 557, 1013, 1571, 1842
NarI GGCGCC 1 cut(s) 389
NciI CCSGG 3 cut(s) 219, 393, 934
NdeI CATATG 1 cut(s) 1337
NlaIV GGNNCC 7 cut(s) 84, 121, 390, 501, 841, 1997, 2671
NmuCI GTSAC 4 cut(s) 382, 1178, 1748, 2254
NspI RCATGY 3 cut(s) 1013, 1897, 2569
OliI CACNNNNGTG 1 cut(s) 1746
PagI TCATGA 3 cut(s) 886, 1777, 1804
PciI ACATGT 2 cut(s) 1009, 1893
PcsI WCGNNNNNNNCGW 2 cut(s) 134, 207
PctI GAATGC 2 cut(s) 1057, 1726
PdmI GAANNNNTTC 1 cut(s) 1203
PfeI GAWTC 5 cut(s) 586, 713, 883, 1417, 2762
PfoI TCCNGGA 1 cut(s) 217
PinAI ACCGGT 1 cut(s) 116
PkrI GCNGC 4 cut(s) 279, 1018, 1674, 2281
PleI GAGTC 4 cut(s) 820, 1124, 1712, 2093
PluTI GGCGCC 1 cut(s) 392
PpsI GAGTC 4 cut(s) 820, 1124, 1712, 2093
PpuMI RGGWCCY 1 cut(s) 688
PscI ACATGT 2 cut(s) 1009, 1893
PshBI ATTAAT 1 cut(s) 2316
Psp124BI GAGCTC 2 cut(s) 24, 72
Psp5II RGGWCCY 1 cut(s) 688
Psp6I CCWGG 3 cut(s) 982, 1574, 2334
PspGI CCWGG 3 cut(s) 982, 1574, 2334
PspN4I GGNNCC 7 cut(s) 84, 121, 390, 501, 841, 1997, 2671
PspPI GGNCC 5 cut(s) 221, 549, 688, 944, 977
PspPPI RGGWCCY 1 cut(s) 688
PstNI CAGNNNCTG 1 cut(s) 1546
PsuI RGATCY 5 cut(s) 839, 960, 1644, 2345, 2435
PvuII CAGCTG 1 cut(s) 2282
RsaI GTAC 7 cut(s) 1491, 1885, 1935, 1997, 2042, 2361, 2626
RsaNI GTAC 7 cut(s) 1490, 1884, 1934, 1996, 2041, 2360, 2625
RseI CAYNNNNRTG 6 cut(s) 11, 380, 873, 1746, 1782, 2529
SacI GAGCTC 2 cut(s) 24, 72
SalI GTCGAC 1 cut(s) 136
SatI GCNGC 4 cut(s) 278, 1017, 1673, 2280
Sau96I GGNCC 5 cut(s) 221, 549, 688, 944, 977
SchI GAGTC 4 cut(s) 821, 1124, 1712, 2093
ScrFI CCNGG 6 cut(s) 219, 393, 934, 984, 1576, 2336
SduI GDGCHC 6 cut(s) 24, 72, 746, 990, 1174, 2606
SfaNI GCATC 6 cut(s) 1292, 1319, 1801, 1806, 2281, 2543
SfcI CTRYAG 1 cut(s) 2341
SfoI GGCGCC 1 cut(s) 390
SinI GGWCC 3 cut(s) 221, 688, 944
SmiMI CAYNNNNRTG 6 cut(s) 11, 380, 873, 1746, 1782, 2529
SmlI CTYRAG 2 cut(s) 1132, 1590
SmoI CTYRAG 2 cut(s) 1132, 1590
SsiI CCGC 7 cut(s) 77, 278, 947, 1193, 1300, 2583, 2737
SspDI GGCGCC 1 cut(s) 388
SspI AATATT 1 cut(s) 1969
SspMI CTAG 7 cut(s) 345, 426, 1056, 1707, 2489, 2496, 2676
SstI GAGCTC 2 cut(s) 24, 72
StyD4I CCNGG 6 cut(s) 217, 391, 932, 982, 1574, 2334
StyI CCWWGG 1 cut(s) 1846
TaaI ACNGT 9 cut(s) 135, 368, 1414, 1489, 1691, 1745, 1828, 2027, 2445
TaiI ACGT 4 cut(s) 1378, 1522, 2770, 2846
TaqI TCGA 9 cut(s) 24, 72, 137, 249, 268, 363, 1066, 1420, 1603
TaqII GACCGA 1 cut(s) 1978
TatI WGTACW 4 cut(s) 1489, 1933, 2359, 2624
TauI GCSGC 1 cut(s) 280
TfiI GAWTC 5 cut(s) 586, 713, 883, 1417, 2762
TscAI CASTG 5 cut(s) 1419, 1818, 2611, 2625, 2728
TseFI GTSAC 4 cut(s) 382, 1178, 1748, 2254
TseI GCWGC 3 cut(s) 1016, 1672, 2279
Tsp45I GTSAC 4 cut(s) 382, 1178, 1748, 2254
TspGWI ACGGA 2 cut(s) 80, 1197
TspRI CASTG 5 cut(s) 1419, 1818, 2611, 2625, 2728
VpaK11BI GGWCC 3 cut(s) 221, 688, 944
VspI ATTAAT 1 cut(s) 2316
XapI RAATTY 3 cut(s) 1092, 1712, 2783
XceI RCATGY 3 cut(s) 1013, 1897, 2569
XmiI GTMKAC 3 cut(s) 137, 155, 938
XmnI GAANNNNTTC 1 cut(s) 1203
XspI CTAG 7 cut(s) 345, 426, 1056, 1707, 2489, 2496, 2676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.