Rw4G000570

chromosome transmission fidelity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000880
Physical Location & Seq
Reverse (-)
1208821 .. 1220040
11220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G000570.1

Sequence Viewer

Length: 2871 bp
ATGGACATGGAGATGGAGATGGAGATGGAGATGGACATGGACGAGCTCGAATTGCTTGAAGCCAACTATCAGCTCCACGAAGATTGCACGGAGCTCGAACCGCCGGAACCCTATCCAGAAGAAGAAGACCAGCAGCCTACCGGTTCCAAATCGCCACCGTCGACTGACCACCAGCAGTCTACTGACAGCCAAATCAACGGCCACAAGCGTCTGCGACCAGAAGACGAAACTGCCGAAGCTCCCGGACCATCTGACGAGAAACGGAGCAGGATCGAAGATGAGGATTGGCTTCGTTACTCGCCGCCACACCAGATCGATCCTGTTGTTGAAGAGGCAAGTGCTGATCTTGTGGAGGAGAAGATTGTGTCTAGGTATGCCTCGGAGATCGACGGTGATTTCATTCCGGTGACGGCGCCGGGTTTGGGCGATAGGGTTTATGCCAGGATTTCTAGGGTGGAGATGGAGGAGCGTCCACAGAGATTGCATGGAACTGGACAATCTCAATCTGGAGGTCTCATTTCGGAACCTATTGATGTTCTACTGCAAAGACTGGAGCAAGAGGCATTTTCAAGGGCCTTGCAAGCCAGTTCCAGAGGTCAAAGTGATGTGATTCTTCCCGAAACACCAGTTGTGCATGAACGACTTTGGGTGGATAAATATGCTCCAAACTCATTTACTGAGCTTCTCAGCGATGAACAGACAAATCGTGAGGTCCTGCTTTGGCTAAAACAATGGGATTCTTGTGTTTTTGGATCAGAGATTAGGAGCACATCAGATGAGGTTTTGTCTGCTTTAAAACGACATTCTTCCATCACTCAACATCAAAAACTTTCCGAGTCAAAGTTTCCGAGAAGTAACAAAGGATCCAGATGGAATAATGAAAAAATTAAGCATTTCAATGGTATGAATCATGAAAATACTAATTCAAAAAGCGTTCAAGAGTTGTCAAACAATTCCCGGTCTACTGGTCCGCCAGAACAAAAGATCCTCTTACTTTGTGGCCCACCAGGGCTCGGAAAGACTACACTTGCACATGTGGCTGCAAAGCATTGTGGATACCGAGTGGTGGAGGTGAATGCTAGTGATGATCGATCATCATCAACTATTGGAGCTAAAATACTTGATGTTGTTCAGATGAACTCAGTCTCAGCCGACTCAAGGCCAAAGTGTTTGGTGATTGACGAAATAGATGGGGCACTTGGTGACGGAAAAGGTGCGGTTGAAGTCATTCTAAAAATGGTTTCTGCTGATAAGAAGTCTGATATGGAGAAGGAAAATGTTAATAAAGAACAAACATCAGGAAAGGCATCTTCAAAAAAGGGGCGGAAATCTGCATCCTTGTTAAGACCTATTATTTGCATATGCAATGACCTATATGCACCTTCGTTGAGACCATTACGTCAGATAGCGAAGGTTCATGTTTTTGTTCAACCAACAGTGAATCGAGTGGTGAGCAGGCTTAAATATATATGTAACAAGGAAGGAATGAAAACAAGTTCCATTGCACTTACTGTACTTGCAGAGCATACAGAATGTGATATACGTTCATGCTTGAACACTCTTCAGTTCCTGAACAAGAAGAAGGAAGCACTCAACGCTTGGGATATTGGCTCTCAAGTGGTTGGTCGAAAGGATATGTCAAGAGGTGTGTTTGATGTCTGGAAAGAGATCTTCCAAAAGAGAAAACCGAAGAGGCAGCAAAGAACAAATAACAGTTGTGGAATAATATCTAGTGAATTCGACTCTTTGCATTCTCTCATTTCTCACCGTGGTGATTATGATTTGATTGTGGATGGTCTTCATGAAAACGTTTTGCATCTTCCTTATCATGATCCAGTGATGCAAAAGACTGTCAAATGCTTGAATAGCCTTGGTGTCTCTGACCTTATGAACAAATATATTATGCGTACACAACATATGTCCCTTTATGCTTATCAGCCTGTTATTGCCATAATTGTACATCGTTTAGTAGCCCAAGTGCAGAGACCGAATATTGAATGGCCAAAATCTTATTATAGGTACCGGACAATGTTAATGGAAAAAGTGGACAGTTTGAAGTCTTGGTACAACACAATTCCACCATCTATTTCAAGGCATTTTTCAATTAAGTCCTTTGTAGAAGACTCAATTTCATTGCTGTTACACATCCTATCACCCCCAACTCTAAGGCTGGCCTCATTGCACTTATTATCAGAGAAGGAGAAGAATGATCTGGCTCAGTTAGTTAGCACGATGGTCTCCTATTCTATAACACATAGAAGGATTAAAGCTGATCCTGTGACTGGCAATCTCGGGCATCAAGCAGCTGATGTGTCGGAGCTGTCTTTTGATCCCCCCATTAATGGCTTTGTTAACTTCCAGGGCTACAGATCTGGCCATCATGTACTTGCCTCAACTATGAAACAGATGTTGGCGCACGAGGTTGAAAAGCAAAGGATTTTGCAAGCAAGCATTGGGAGATCTGCACAGTTGACAGATGGATACAACAAGGAAAACCATGCTTCTTTAAGGCCAGAAACTAGGAGATTACAATCTGGTAGAGCTGATCATTTAGGTGCATCTTCTGTGAACAATGGAAAGTCAGAAAGCATGTCAAATCCCAGTAGCGGTGTTTTACCTAACTTGGGCACTGGGAATACCCCAGTGAGTACAAAGTTAAACTCTTCTGGATGTATGAGAAAGCCGTCTGGTGGTTCCTCTAGTTTCTTTGATAGGTTTAGAAAGCTTGGTAAAGGTTCTCAGAACACTGCTGAGGCTGTGCGGAAGGAAGCAACCTCTGAGAGAGATTCACGTCCTTTGGTCTTTAAATTTAATGAGGGCTTTACAAATGCAGTTAAAAGGCCAGTTCGTGTTCGGGAGTTTCTGACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

956

Amino Acids

107.22

Weight (kDa)

7.2

Isoelectric Point (pI)

53.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 330 - 414 1.4e-13 ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1 PF25361 481 - 532 6.7e-08 RFC1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1398
Acc65I GGTACC 1 cut(s) 2019
AccB1I GGYRCC 2 cut(s) 412, 2019
AccI GTMKAC 3 cut(s) 161, 179, 962
AciI CCGC 7 cut(s) 101, 302, 971, 1217, 1324, 2607, 2761
AclI AACGTT 1 cut(s) 1809
AclWI GGATC 9 cut(s) 278, 311, 760, 858, 871, 979, 1826, 2267, 2324
AcoI YGGCCR 3 cut(s) 199, 2000, 2374
AcsI RAATTY 2 cut(s) 1736, 2807
AcuI CTGAAG 1 cut(s) 1547
AcyI GRCGYC 1 cut(s) 413
AdeI CACNNNGTG 1 cut(s) 1202
AfaI GTAC 7 cut(s) 1515, 1909, 1959, 2021, 2066, 2385, 2650
AfiI CCNNNNNNNGG 9 cut(s) 422, 1013, 1066, 1158, 2282, 2342, 2606, 2624, 2690
AflIII ACRYGT 1 cut(s) 1033
AgeI ACCGGT 1 cut(s) 140
AjiI CACGTC 1 cut(s) 2792
AjnI CCWGG 3 cut(s) 440, 1006, 2358
AjuI GAANNNNNNNTTGG 2 cut(s) 2393, 2425
AleI CACNNNNGTG 1 cut(s) 1770
AloI GAACNNNNNNTCC 2 cut(s) 969, 1001
Alw21I GWGCWC 3 cut(s) 48, 96, 770
Alw26I GTCTC 6 cut(s) 518, 1150, 1384, 1882, 1978, 2242
AlwI GGATC 9 cut(s) 278, 311, 760, 858, 871, 979, 1826, 2267, 2324
AlwNI CAGNNNCTG 1 cut(s) 1570
Ama87I CYCGRG 1 cut(s) 2291
AoxI GGCC 9 cut(s) 199, 573, 1000, 1160, 2000, 2172, 2374, 2510, 2840
ApeKI GCWGC 4 cut(s) 133, 1040, 1696, 2303
ApoI RAATTY 2 cut(s) 1736, 2807
ArsI GACNNNNNNTTYG 2 cut(s) 1338, 1370
AseI ATTAAT 1 cut(s) 2340
AsiGI ACCGGT 1 cut(s) 140
Asp700I GAANNNNTTC 1 cut(s) 1227
Asp718I GGTACC 1 cut(s) 2019
AspLEI GCGC 2 cut(s) 415, 2416
AspS9I GGNCC 5 cut(s) 245, 573, 712, 968, 1001
AsuC2I CCSGG 3 cut(s) 243, 417, 958
AsuHPI GGTGA 9 cut(s) 404, 418, 1084, 1186, 1214, 1462, 1757, 1784, 2145
AvaI CYCGRG 1 cut(s) 2291
AvaII GGWCC 3 cut(s) 245, 712, 968
BaeGI GKGCMC 2 cut(s) 1198, 2630
BalI TGGCCA 2 cut(s) 2002, 2376
BamHI GGATCC 1 cut(s) 863
BanI GGYRCC 2 cut(s) 412, 2019
BanII GRGCYC 3 cut(s) 48, 96, 1014
BarI GAAGNNNNNNTAC 2 cut(s) 2048, 2080
BauI CACGAG 1 cut(s) 2417
BbsI GAAGAC 4 cut(s) 132, 228, 1790, 2127
Bbv12I GWGCWC 3 cut(s) 48, 96, 770
BbvCI CCTCAGC 1 cut(s) 2751
BbvI GCAGC 4 cut(s) 145, 1027, 1708, 2315
BceAI ACGGC 3 cut(s) 214, 426, 2668
BcgI CGANNNNNNTGC 2 cut(s) 76, 110
BciT130I CCWGG 3 cut(s) 442, 1008, 2360
BciVI GTATCC 2 cut(s) 1049, 2474
BclI TGATCA 1 cut(s) 2545
BcnI CCSGG 3 cut(s) 243, 417, 958
BcoDI GTCTC 6 cut(s) 518, 1150, 1384, 1882, 1978, 2242
BfaI CTAG 6 cut(s) 369, 450, 1080, 1731, 2520, 2700
BfmI CTRYAG 1 cut(s) 2365
BfoI RGCGCY 1 cut(s) 416
BfuI GTATCC 2 cut(s) 1049, 2474
BglII AGATCT 3 cut(s) 1668, 2369, 2459
BisI GCNGC 5 cut(s) 134, 302, 1041, 1697, 2304
BlsI GCNGC 5 cut(s) 135, 303, 1042, 1698, 2305
Bme1390I CCNGG 6 cut(s) 243, 417, 442, 958, 1008, 2360
Bme18I GGWCC 3 cut(s) 245, 712, 968
BmeT110I CYCGRG 1 cut(s) 2291
BmgBI CACGTC 1 cut(s) 2792
BmgT120I GGNCC 5 cut(s) 245, 573, 712, 968, 1001
BmiI GGNNCC 7 cut(s) 108, 145, 414, 525, 865, 2021, 2695
BmrFI CCNGG 6 cut(s) 243, 417, 442, 958, 1008, 2360
BmrI ACTGGG 3 cut(s) 2595, 2636, 2640
BmsI GCATC 6 cut(s) 1316, 1343, 1825, 1830, 2305, 2567
BmuI ACTGGG 3 cut(s) 2595, 2636, 2640
BpiI GAAGAC 4 cut(s) 132, 228, 1790, 2127
BpmI CTGGAG 2 cut(s) 528, 572
Bpu10I CCTNAGC 1 cut(s) 2751
BpuEI CTTGAG 2 cut(s) 1141, 1599
BpuMI CCSGG 3 cut(s) 243, 417, 958
Bsa29I ATCGAT 2 cut(s) 315, 1090
BsaBI GATNNNNATC 2 cut(s) 1096, 2530
BsaHI GRCGYC 1 cut(s) 413
BsaI GGTCTC 4 cut(s) 518, 1384, 1978, 2242
BsaJI CCNNGG 5 cut(s) 378, 1007, 1768, 1870, 2359
BsaWI WCCGGW 3 cut(s) 140, 403, 2022
Bsc4I CCNNNNNNNGG 9 cut(s) 422, 1013, 1066, 1158, 2282, 2342, 2606, 2624, 2690
Bse118I RCCGGY 1 cut(s) 140
Bse3DI GCAATG 4 cut(s) 1372, 1500, 2132, 2177
Bse8I GATNNNNATC 2 cut(s) 1096, 2530
BseBI CCWGG 3 cut(s) 442, 1008, 2360
BseCI ATCGAT 2 cut(s) 315, 1090
BseDI CCNNGG 5 cut(s) 378, 1007, 1768, 1870, 2359
BseGI GGATG 4 cut(s) 1334, 1798, 2145, 2675
BseJI GATNNNNATC 2 cut(s) 1096, 2530
BseLI CCNNNNNNNGG 9 cut(s) 422, 1013, 1066, 1158, 2282, 2342, 2606, 2624, 2690
BseMI GCAATG 4 cut(s) 1372, 1500, 2132, 2177
BseMII CTCAG 8 cut(s) 669, 700, 1155, 1161, 2231, 2742, 2753, 2769
BseRI GAGGAG 2 cut(s) 368, 479
BseSI GKGCMC 2 cut(s) 1198, 2630
BseXI GCAGC 4 cut(s) 145, 1027, 1708, 2315
BsgI GTGCAG 2 cut(s) 2000, 2448
BshFI GGCC 9 cut(s) 201, 575, 1002, 1162, 2002, 2174, 2376, 2512, 2842
BshNI GGYRCC 2 cut(s) 412, 2019
BshTI ACCGGT 1 cut(s) 140
BshVI ATCGAT 2 cut(s) 315, 1090
BsiHKAI GWGCWC 3 cut(s) 48, 96, 770
BsiHKCI CYCGRG 1 cut(s) 2291
BsiSI CCGG 7 cut(s) 104, 141, 243, 404, 416, 958, 2023
BslFI GGGAC 1 cut(s) 1906
BslI CCNNNNNNNGG 9 cut(s) 422, 1013, 1066, 1158, 2282, 2342, 2606, 2624, 2690
BsmAI GTCTC 6 cut(s) 518, 1150, 1384, 1882, 1978, 2242
BsmFI GGGAC 1 cut(s) 1906
BsmI GAATGC 2 cut(s) 1081, 1750
BsnI GGCC 9 cut(s) 201, 575, 1002, 1162, 2002, 2174, 2376, 2512, 2842
Bso31I GGTCTC 4 cut(s) 518, 1384, 1978, 2242
BsoBI CYCGRG 1 cut(s) 2291
Bsp1286I GDGCHC 6 cut(s) 48, 96, 770, 1014, 1198, 2630
Bsp1407I TGTACA 1 cut(s) 1957
BspACI CCGC 7 cut(s) 101, 302, 971, 1217, 1324, 2607, 2761
BspANI GGCC 9 cut(s) 201, 575, 1002, 1162, 2002, 2174, 2376, 2512, 2842
BspCNI CTCAG 8 cut(s) 670, 699, 1154, 1160, 2230, 2743, 2752, 2770
BspDI ATCGAT 2 cut(s) 315, 1090
BspHI TCATGA 3 cut(s) 910, 1801, 1828
BspLI GGNNCC 7 cut(s) 108, 145, 414, 525, 865, 2021, 2695
BspPI GGATC 9 cut(s) 278, 311, 760, 858, 871, 979, 1826, 2267, 2324
BspT107I GGYRCC 2 cut(s) 412, 2019
BspTNI GGTCTC 4 cut(s) 518, 1384, 1978, 2242
BsrDI GCAATG 4 cut(s) 1372, 1500, 2132, 2177
BsrFI RCCGGY 1 cut(s) 140
BsrGI TGTACA 1 cut(s) 1957
BssAI RCCGGY 1 cut(s) 140
BssECI CCNNGG 5 cut(s) 378, 1007, 1768, 1870, 2359
BssNI GRCGYC 1 cut(s) 413
BssSI CACGAG 1 cut(s) 2417
BssT1I CCWWGG 1 cut(s) 1870
Bst2BI CACGAG 1 cut(s) 2417
Bst2UI CCWGG 3 cut(s) 442, 1008, 2360
Bst4CI ACNGT 9 cut(s) 159, 392, 1438, 1513, 1715, 1769, 1852, 2051, 2469
Bst6I CTCTTC 4 cut(s) 324, 1566, 1685, 2668
BstACI GRCGYC 1 cut(s) 413
BstAUI TGTACA 1 cut(s) 1957
BstC8I GCNNGC 5 cut(s) 582, 1457, 2172, 2445, 2449
BstDEI CTNAG 9 cut(s) 678, 686, 1141, 1147, 2165, 2217, 2739, 2751, 2778
BstDSI CCRYGG 1 cut(s) 1768
BstF5I GGATG 4 cut(s) 1334, 1798, 2145, 2675
BstH2I RGCGCY 1 cut(s) 416
BstHHI GCGC 2 cut(s) 415, 2416
BstMAI GTCTC 6 cut(s) 518, 1150, 1384, 1882, 1978, 2242
BstMWI GCNNNNNNNGC 6 cut(s) 52, 100, 581, 1037, 1595, 1866
BstNI CCWGG 3 cut(s) 442, 1008, 2360
BstNSI RCATGY 2 cut(s) 1037, 2593
BstSCI CCNGG 6 cut(s) 241, 415, 440, 956, 1006, 2358
BstSFI CTRYAG 1 cut(s) 2365
BstSLI GKGCMC 2 cut(s) 1198, 2630
BstV1I GCAGC 4 cut(s) 145, 1027, 1708, 2315
BstV2I GAAGAC 4 cut(s) 132, 228, 1790, 2127
BstX2I RGATCY 5 cut(s) 863, 984, 1668, 2369, 2459
BstYI RGATCY 5 cut(s) 863, 984, 1668, 2369, 2459
Bsu15I ATCGAT 2 cut(s) 315, 1090
BsuI GTATCC 2 cut(s) 1049, 2474
BsuRI GGCC 9 cut(s) 201, 575, 1002, 1162, 2002, 2174, 2376, 2512, 2842
BsuTUI ATCGAT 2 cut(s) 315, 1090
BtgI CCRYGG 1 cut(s) 1768
BtgZI GCGATG 1 cut(s) 705
BtrI CACGTC 1 cut(s) 2792
BtsCI GGATG 4 cut(s) 1334, 1798, 2145, 2675
BtsI GCAGTG 1 cut(s) 2745
BtsIMutI CAGTG 5 cut(s) 1443, 1842, 2628, 2649, 2745
Cac8I GCNNGC 5 cut(s) 582, 1457, 2172, 2445, 2449
CaiI CAGNNNCTG 1 cut(s) 1570
CciI TCATGA 3 cut(s) 910, 1801, 1828
CfoI GCGC 2 cut(s) 415, 2416
Cfr10I RCCGGY 1 cut(s) 140
Cfr13I GGNCC 5 cut(s) 245, 573, 712, 968, 1001
ClaI ATCGAT 2 cut(s) 315, 1090
CseI GACGC 2 cut(s) 197, 458
Csp6I GTAC 7 cut(s) 1514, 1908, 1958, 2020, 2065, 2384, 2649
CspAI ACCGGT 1 cut(s) 140
CspCI CAANNNNNGTGG 4 cut(s) 65, 100, 462, 497
CviQI GTAC 7 cut(s) 1514, 1908, 1958, 2020, 2065, 2384, 2649
DdeI CTNAG 9 cut(s) 678, 686, 1141, 1147, 2165, 2217, 2739, 2751, 2778
DinI GGCGCC 1 cut(s) 414
DraI TTTAAA 2 cut(s) 795, 2806
DraIII CACNNNGTG 1 cut(s) 1202
DrdI GACNNNNNNGTC 1 cut(s) 1398
DseDI GACNNNNNNGTC 1 cut(s) 1398
EaeI YGGCCR 3 cut(s) 199, 2000, 2374
Eam1104I CTCTTC 4 cut(s) 324, 1566, 1685, 2668
EarI CTCTTC 4 cut(s) 324, 1566, 1685, 2668
EciI GGCGGA 2 cut(s) 960, 1339
Ecl136II GAGCTC 2 cut(s) 46, 94
Eco130I CCWWGG 1 cut(s) 1870
Eco24I GRGCYC 3 cut(s) 48, 96, 1014
Eco31I GGTCTC 4 cut(s) 518, 1384, 1978, 2242
Eco47I GGWCC 3 cut(s) 245, 712, 968
Eco53kI GAGCTC 2 cut(s) 46, 94
Eco57I CTGAAG 1 cut(s) 1547
Eco88I CYCGRG 1 cut(s) 2291
EcoICRI GAGCTC 2 cut(s) 46, 94
EcoO109I RGGNCCY 2 cut(s) 573, 712
EcoRI GAATTC 1 cut(s) 1736
EcoRII CCWGG 3 cut(s) 440, 1006, 2358
EcoT14I CCWWGG 1 cut(s) 1870
EcoT38I GRGCYC 3 cut(s) 48, 96, 1014
EgeI GGCGCC 1 cut(s) 414
EheI GGCGCC 1 cut(s) 414
ErhI CCWWGG 1 cut(s) 1870
FalI AAGNNNNNCTT 2 cut(s) 974, 1006
FaqI GGGAC 1 cut(s) 1906
FauNDI CATATG 2 cut(s) 1361, 1917
FbaI TGATCA 1 cut(s) 2545
FblI GTMKAC 3 cut(s) 161, 179, 962
Fnu4HI GCNGC 5 cut(s) 134, 302, 1041, 1697, 2304
FokI GGATG 4 cut(s) 1321, 1805, 2132, 2682
FriOI GRGCYC 3 cut(s) 48, 96, 1014
Fsp4HI GCNGC 5 cut(s) 134, 302, 1041, 1697, 2304
FspBI CTAG 6 cut(s) 369, 450, 1080, 1731, 2520, 2700
GlaI GCGC 2 cut(s) 414, 2415
GluI GCNGC 5 cut(s) 134, 302, 1041, 1697, 2304
GsuI CTGGAG 2 cut(s) 528, 572
HaeII RGCGCY 1 cut(s) 416
HaeIII GGCC 9 cut(s) 201, 575, 1002, 1162, 2002, 2174, 2376, 2512, 2842
HapII CCGG 7 cut(s) 104, 141, 243, 404, 416, 958, 2023
HgaI GACGC 2 cut(s) 197, 458
HhaI GCGC 2 cut(s) 415, 2416
Hin1I GRCGYC 1 cut(s) 413
Hin6I GCGC 2 cut(s) 413, 2414
HinP1I GCGC 2 cut(s) 413, 2414
HincII GTYRAC 3 cut(s) 162, 2353, 2472
HindII GTYRAC 3 cut(s) 162, 2353, 2472
HindIII AAGCTT 1 cut(s) 2723
HinfI GANTC 9 cut(s) 610, 737, 836, 907, 1154, 1441, 1742, 2123, 2786
HpaI GTTAAC 1 cut(s) 2353
HpaII CCGG 7 cut(s) 104, 141, 243, 404, 416, 958, 2023
HphI GGTGA 9 cut(s) 404, 418, 1084, 1186, 1214, 1462, 1757, 1784, 2145
Hpy166II GTNNAC 9 cut(s) 162, 180, 473, 963, 1910, 2047, 2353, 2472, 2569
Hpy8I GTNNAC 9 cut(s) 162, 180, 473, 963, 1910, 2047, 2353, 2472, 2569
Hpy99I CGWCG 2 cut(s) 163, 392
HpyAV CCTTC 8 cut(s) 1264, 1392, 1405, 1475, 1576, 2191, 2253, 2758
HpyCH4III ACNGT 9 cut(s) 159, 392, 1438, 1513, 1715, 1769, 1852, 2051, 2469
HpyCH4IV ACGT 5 cut(s) 1399, 1543, 1809, 2791, 2867
HpyF10VI GCNNNNNNNGC 6 cut(s) 52, 100, 581, 1037, 1595, 1866
HpyF3I CTNAG 9 cut(s) 678, 686, 1141, 1147, 2165, 2217, 2739, 2751, 2778
HpySE526I ACGT 5 cut(s) 1399, 1543, 1809, 2791, 2867
Hsp92I GRCGYC 1 cut(s) 413
HspAI GCGC 2 cut(s) 413, 2414
KasI GGCGCC 1 cut(s) 412
KpnI GGTACC 1 cut(s) 2023
Ksp22I TGATCA 1 cut(s) 2545
KspAI GTTAAC 1 cut(s) 2353
Lsp1109I GCAGC 4 cut(s) 145, 1027, 1708, 2315
LweI GCATC 6 cut(s) 1316, 1343, 1825, 1830, 2305, 2567
MaeI CTAG 6 cut(s) 369, 450, 1080, 1731, 2520, 2700
MaeII ACGT 5 cut(s) 1399, 1543, 1809, 2791, 2867
MaeIII GTNAC 7 cut(s) 293, 406, 854, 1202, 1472, 2139, 2278
MflI RGATCY 5 cut(s) 863, 984, 1668, 2369, 2459
MhlI GDGCHC 6 cut(s) 48, 96, 770, 1014, 1198, 2630
MlsI TGGCCA 2 cut(s) 2002, 2376
MluNI TGGCCA 2 cut(s) 2002, 2376
Mly113I GGCGCC 1 cut(s) 413
MlyI GAGTC 4 cut(s) 845, 1148, 1736, 2117
MmeI TCCRAC 1 cut(s) 2295
Mox20I TGGCCA 2 cut(s) 2002, 2376
MroXI GAANNNNTTC 1 cut(s) 1227
MscI TGGCCA 2 cut(s) 2002, 2376
MslI CAYNNNNRTG 5 cut(s) 11, 404, 897, 1770, 2553
Msp20I TGGCCA 2 cut(s) 2002, 2376
MspA1I CMGCKG 1 cut(s) 2306
MspI CCGG 7 cut(s) 104, 141, 243, 404, 416, 958, 2023
MspR9I CCNGG 6 cut(s) 243, 417, 442, 958, 1008, 2360
Mva1269I GAATGC 2 cut(s) 1081, 1750
MvaI CCWGG 3 cut(s) 442, 1008, 2360
MwoI GCNNNNNNNGC 6 cut(s) 52, 100, 581, 1037, 1595, 1866
NarI GGCGCC 1 cut(s) 413
NciI CCSGG 3 cut(s) 243, 417, 958
NdeI CATATG 2 cut(s) 1361, 1917
NlaIV GGNNCC 7 cut(s) 108, 145, 414, 525, 865, 2021, 2695
NmuCI GTSAC 3 cut(s) 406, 1202, 2278
NspI RCATGY 2 cut(s) 1037, 2593
OliI CACNNNNGTG 1 cut(s) 1770
PagI TCATGA 3 cut(s) 910, 1801, 1828
PciI ACATGT 1 cut(s) 1033
PcsI WCGNNNNNNNCGW 2 cut(s) 158, 231
PctI GAATGC 2 cut(s) 1081, 1750
PdmI GAANNNNTTC 1 cut(s) 1227
PfeI GAWTC 5 cut(s) 610, 737, 907, 1441, 2786
PfoI TCCNGGA 1 cut(s) 241
PinAI ACCGGT 1 cut(s) 140
PkrI GCNGC 5 cut(s) 135, 303, 1042, 1698, 2305
PleI GAGTC 4 cut(s) 844, 1148, 1736, 2117
PluTI GGCGCC 1 cut(s) 416
PpsI GAGTC 4 cut(s) 844, 1148, 1736, 2117
PpuMI RGGWCCY 1 cut(s) 712
PscI ACATGT 1 cut(s) 1033
PshBI ATTAAT 1 cut(s) 2340
Psp124BI GAGCTC 2 cut(s) 48, 96
Psp1406I AACGTT 1 cut(s) 1809
Psp5II RGGWCCY 1 cut(s) 712
Psp6I CCWGG 3 cut(s) 440, 1006, 2358
PspGI CCWGG 3 cut(s) 440, 1006, 2358
PspN4I GGNNCC 7 cut(s) 108, 145, 414, 525, 865, 2021, 2695
PspPI GGNCC 5 cut(s) 245, 573, 712, 968, 1001
PspPPI RGGWCCY 1 cut(s) 712
PstNI CAGNNNCTG 1 cut(s) 1570
PsuI RGATCY 5 cut(s) 863, 984, 1668, 2369, 2459
PvuII CAGCTG 1 cut(s) 2306
RsaI GTAC 7 cut(s) 1515, 1909, 1959, 2021, 2066, 2385, 2650
RsaNI GTAC 7 cut(s) 1514, 1908, 1958, 2020, 2065, 2384, 2649
RseI CAYNNNNRTG 5 cut(s) 11, 404, 897, 1770, 2553
SacI GAGCTC 2 cut(s) 48, 96
SalI GTCGAC 1 cut(s) 160
SatI GCNGC 5 cut(s) 134, 302, 1041, 1697, 2304
Sau96I GGNCC 5 cut(s) 245, 573, 712, 968, 1001
SchI GAGTC 4 cut(s) 845, 1148, 1736, 2117
ScrFI CCNGG 6 cut(s) 243, 417, 442, 958, 1008, 2360
SduI GDGCHC 6 cut(s) 48, 96, 770, 1014, 1198, 2630
SfaNI GCATC 6 cut(s) 1316, 1343, 1825, 1830, 2305, 2567
SfcI CTRYAG 1 cut(s) 2365
SfoI GGCGCC 1 cut(s) 414
SinI GGWCC 3 cut(s) 245, 712, 968
SmiMI CAYNNNNRTG 5 cut(s) 11, 404, 897, 1770, 2553
SmlI CTYRAG 2 cut(s) 1156, 1614
SmoI CTYRAG 2 cut(s) 1156, 1614
SsiI CCGC 7 cut(s) 101, 302, 971, 1217, 1324, 2607, 2761
SspDI GGCGCC 1 cut(s) 412
SspI AATATT 1 cut(s) 1993
SspMI CTAG 6 cut(s) 369, 450, 1080, 1731, 2520, 2700
SstI GAGCTC 2 cut(s) 48, 96
StyD4I CCNGG 6 cut(s) 241, 415, 440, 956, 1006, 2358
StyI CCWWGG 1 cut(s) 1870
TaaI ACNGT 9 cut(s) 159, 392, 1438, 1513, 1715, 1769, 1852, 2051, 2469
TaiI ACGT 5 cut(s) 1402, 1546, 1812, 2794, 2870
TaqII GACCGA 1 cut(s) 2002
TatI WGTACW 4 cut(s) 1513, 1957, 2383, 2648
TauI GCSGC 1 cut(s) 304
TfiI GAWTC 5 cut(s) 610, 737, 907, 1441, 2786
TscAI CASTG 5 cut(s) 1443, 1842, 2635, 2649, 2752
TseFI GTSAC 3 cut(s) 406, 1202, 2278
TseI GCWGC 4 cut(s) 133, 1040, 1696, 2303
Tsp45I GTSAC 3 cut(s) 406, 1202, 2278
TspGWI ACGGA 3 cut(s) 104, 277, 1221
TspRI CASTG 5 cut(s) 1443, 1842, 2635, 2649, 2752
VpaK11BI GGWCC 3 cut(s) 245, 712, 968
VspI ATTAAT 1 cut(s) 2340
XapI RAATTY 2 cut(s) 1736, 2807
XceI RCATGY 2 cut(s) 1037, 2593
XmiI GTMKAC 3 cut(s) 161, 179, 962
XmnI GAANNNNTTC 1 cut(s) 1227
XspI CTAG 6 cut(s) 369, 450, 1080, 1731, 2520, 2700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.