Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0014911

Physical Location & Seq

Genomic Coordinates Forward (+)

1204589 .. 1208257

Gene Structure 3669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G000560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3180 bp

ATGGCGTCTTCATCAAACAAGAAAACATTGCCTAACTCACCATCATCCGTCGGCCGGCCACCTTCATCGTCTGTCAAATTTGCTCGCCGGACGTCGAGCGGGCGTGTCATGAGCTTGTCCCGGGACGAGGACTTGGACATGAGCGGAGAAATGTCGGGTGAAAATGACTACATCAATTACACGGTGATGATGCCGCCGACGCCGGACAACCAGCCGGGAGAGGAAGCCAAGGCCGACAGTACTGCGGGGACTTACGCGGCCTCACGGTTCGGGACAGAGCCGAGACGACGGAATGATGGTGGCGGCGGCGAAGCGTCGAAGATGGATAGGAGAATGTCGGTGATGAGCTCATCTAATAACAAATCAATATTGTTGAGGAGCCAAACTGGGGACTTTGATCACAACCGTTGGTTATTCGAGACGAAGGGAACGTACGGCATTGGAAACGCGTTTTGGTCGCAGAAGGACGAGGACTCGTATAATGGGCCCACAGGCGATATGAACATGCAGGACTTTATTGACGACAAGCCATGGAAACCCCTCACCAGGAAGATTTCAGTTCCTCCTGCTATTCTTAGCCCTTACCGGTTATTGGTGGTGATTCGTCTGATAGTACTTTTCTTTTTCCTAGTGTGGCGAGTACAGAATCCCAACCCAGATGCAATGTGGCTATGGGGGATTTCCATAGTTTGTGAGATTTGGTTTGCGTTCTCATGGCTACTAGACATACTTCCCAAAATGAATCCCATAAACCGTGCCACAGACTTGTCTGCCCTACATGACAAGTTTGAGCAGCCCTCGCCGCAAAACCCCACCGGAAGGTCTGATCTGCCTGGCGTCGATGTATTCGTGTCCACTGCCGATGCAGAAAAGGAACCGCCTCTTGTCACAGCCAATACCATGCTCTCCATCCTTGCTGTTGATTACCCTGTGGAAAAACTTACAGCCTACATTTCAGATGATGGCGGTGCCATTCTCACATTTGAGGCCATGGCCGAGGCTGTAGCCTTTGCTGAGGTTTGGGTACCCTTTTGCCGAAAACACAACATAGAGCCAAGGAATCCAGACAGTTACTTCAACAGCAAGGTAGACCCAACCAAGAACAAGAAGCGGCCCGATTTTGTCAAGGACAGGCGTTGGATCAAGAGAGAGTATGATGAGTTCAAGGTCAGGATCAACGGTCTGCCTGATGTAATACGTAAGCGATGTGAAATGCATAACTGTAGAGAGGAAAGGAAGCTTACAAAGGAAACAAGTACTGGTGGATCAGCTCGATCAATAGAGCCATTGGGTGATAATGCTGTTGATGAGCCAGGTTCCACAGTCCCCAAGGCCACGTGGATGGCCGACGGAACACACTGGCCGGGGACATGGCTGGAACCTTGTGCTGATCATAAAAAGGGAGACCATGCTGGCATCCTACAGGTGATGAGTAAGGTCCCAGATGTGGAGCCCGTAATGGGTTTTCTTGACGAGAAAAAACTAGACTTCACAGGAGTGGACATTCGGGTCCCCATGTTTGCCTATGTGTCCAGGGAAAAGCGTCCTGGATACGACCACAACAAGAAGGCAGGAGCCATGAATGCCATGGTTAGAGCATCAGCAGTATTGTCTAACGGCCCATTTATACTGAATCTCGACTGTGACCATTATATCTATAACTCCAAAGCTATAAGGGAAGGAATGTGCTTCATGATGGACCGCGGAGGAGATCGCATTTGCTACATACAGTTCCCTCAGAGATTCGAAGGGATCGATCCATCTGATCGTTATGCTAATCATAACACAGTCTTCTTTGATGGAAATATGAGAGCCTTGGACGGTCTTCAAGGGCCAGTGTATGTGGGAACTGGGTGCATGTTCAGGCGTTTTGCACTCTACGGCTTCCACCCGCCAAGGGCGCATGAGTACCTGGGGGTATTTGGCCACAAAAAGGCTCCAGCACCACAATATCAGACTATGGATTCTGTAAGATTAAGGCCTCCTGAAGAAGGAGACGAAGCAGCGCCTCTAGCAGAACACCCCGACTTGGGACTTCCAATCAAGTTTGGAAATTCTCAAGTATTCACTGATTCCATAGCTGTTGCTGAGTATCAAGGACGGCCTCTTGCTGATCATGAAACAGTCAAGAATGGCCGCCCTCCTGGCGCCCTGCTAGAACCACGTCCCCCACTCGATGCACCCACTGTTGCCGAAGCGGTTGCTGTTATTTCCTGCTGGTTTGAGGAAAACACCGAATGGGGAGACAGGATAGGTTGGATTTATGGATCGGTGACAGAGGATGTGGTGACAGGTTACCGAATGCACAATCGTGGATGGCGGTCTGTGTATTGCATAACCAAGCGTGACGCATTCCGCGGCACTGCACCTATCAACCTGACAGACAGATTGCACCAGGTGCTTCGATGGGCCACTGGTTCAGTGGAAATCTTCTACTCTAGAAACAATGCATTCCTGGCATGCCGACGCCTCAAGTTCCTACAGCGTATTGCATACCTCAATGTCGGCATTTATCCCTTCACCTCCGTCTTTCTGGTGGTTTATTGTTTCCTCCCTGCACTCTGCCTCTTTTCAGGACAATTCATAGTGGCAGGTCTAAATATTCCCTTCCTTTCCTACCTCCTTACCATCACGATATGTCTCATTCTTATCTCCATACTTGAAGTCAGATGGTCCGGCATTGGTCTTGAGGAATGGTGGCGTAATGAGCAGTTTTGGTGCATTGGTGGAACCAGTGCTCACCTTGCCGCTGTCATCCAGGGACTCCTCAAAGTCATAGCGGGCATCGAAATTTCCTTCACCTTAACCTCCAAGTCTGCCGGCGATGACGAAGATGACATTTACGCTGATCTTTACATAGTCAAATGGACAAGTCTCTTCATCATGCCAATATTAATCATAGTTACCAACATTATTGCAGCTGTCATTGGAATATCAAGGACCTTATACGCTGTCATACCCCAATGGAATAAGCTACTCGGAGGACTCTTCTTCAGTTTTTGGGTGTTGGCTCACATGTACCCATTTATGAAAGGCTTGATGGGAAGGAGAGGAAGGATACCTACCATCGTATATGTATGGGCGGGACTGCTCGCTATTACAGTGTCTTTGCTTTGGCTGACACTCAATCCTCCTGGCAGTGGTATGACTGGTGCTGGTGGTGGAGAGATAAAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0008152 GO:0009846 GO:0009856 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0022414 GO:0032501 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0051704 GO:0051753 GO:0070085 GO:0071554 GO:0071669 GO:0097502

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

1059

Amino Acids

118.64

Weight (kDa)

6.7

Isoelectric Point (pI)

48.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	280 - 1046	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33100 AT2G33100
fragaria_vesca	FvH4_4g00350
malus_domestica	MD04G1004000.v1.1
prunus_persica	Prupe.1G003500_v2.0.a1
pyrus_communis	pycom04g00410
rosa_chinensis	RchiOBHm_Chr4g0385221
rosa_laevigata	RLG00000010247
rosa_multiflora	Rmu_sc0008734.1_g000009
rosa_roxburghii	Rroxscaffold_5G00333120
rosa_rugosa	Rorug03G0300000
rosa_samantha	Rh4AG003400 Rh4BG002800 Rh4CG003900 Rh4DG003100
rosa_wichuraiana	Rw4G000560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1508
AatII	GACGTC	1 cut(s)	95
Acc36I	ACCTGC	1 cut(s)	2582
Acc65I	GGTACC	1 cut(s)	1024
AccB1I	GGYRCC	3 cut(s)	968, 1024, 2147
AccBSI	CCGCTC	2 cut(s)	99, 144
AccI	GTMKAC	1 cut(s)	1089
AccII	CGCG	4 cut(s)	257, 449, 1704, 2358
AclWI	GGATC	6 cut(s)	1148, 1181, 1273, 1751, 1760, 2275
AcoI	YGGCCR	7 cut(s)	52, 56, 993, 1344, 1361, 1924, 2134
AcsI	RAATTY	3 cut(s)	77, 2053, 2790
AcuI	CTGAAG	2 cut(s)	2007, 2977
AcvI	CACGTG	1 cut(s)	1338
AcyI	GRCGYC	6 cut(s)	5, 92, 200, 837, 2148, 2467
AdeI	CACNNNGTG	1 cut(s)	2398
AfaI	GTAC	8 cut(s)	241, 434, 615, 642, 1026, 1258, 1910, 3020
AflIII	ACRYGT	2 cut(s)	447, 3015
AgeI	ACCGGT	1 cut(s)	585
AgsI	TTSAA	4 cut(s)	1078, 1165, 1829, 2663
AjiI	CACGTC	1 cut(s)	2165
AjuI	GAANNNNNNNTTGG	2 cut(s)	436, 468
AleI	CACNNNNGTG	2 cut(s)	1496, 2310
AluBI	AGCT	8 cut(s)	114, 348, 1240, 1271, 1670, 2081, 2921, 2974
AluI	AGCT	8 cut(s)	114, 348, 1240, 1271, 1670, 2081, 2921, 2974
Alw21I	GWGCWC	2 cut(s)	350, 2740
Alw26I	GTCTC	7 cut(s)	277, 413, 1398, 1989, 2238, 2645, 2879
AlwI	GGATC	6 cut(s)	1148, 1181, 1273, 1751, 1760, 2275
Ama87I	CYCGRG	1 cut(s)	120
ApaI	GGGCCC	1 cut(s)	489
ApeKI	GCWGC	3 cut(s)	793, 2003, 2918
ApoI	RAATTY	3 cut(s)	77, 2053, 2790
AseI	ATTAAT	1 cut(s)	2894
AsiGI	ACCGGT	1 cut(s)	585
Asp718I	GGTACC	1 cut(s)	1024
AspLEI	GCGC	3 cut(s)	1903, 2008, 2150
AsuC2I	CCSGG	4 cut(s)	121, 122, 216, 1365
AsuII	TTCGAA	1 cut(s)	1746
AvaI	CYCGRG	1 cut(s)	120
AvaII	GGWCC	5 cut(s)	1438, 1510, 1699, 2673, 2940
BaeGI	GKGCMC	1 cut(s)	489
BalI	TGGCCA	1 cut(s)	1926
BanI	GGYRCC	3 cut(s)	968, 1024, 2147
BanII	GRGCYC	3 cut(s)	350, 489, 1455
BarI	GAAGNNNNNNTAC	4 cut(s)	416, 448, 3046, 3078
BbrPI	CACGTG	1 cut(s)	1338
BbsI	GAAGAC	2 cut(s)	1783, 1817
Bbv12I	GWGCWC	2 cut(s)	350, 2740
BbvCI	CCTCAGC	1 cut(s)	1014
BbvI	GCAGC	3 cut(s)	805, 2015, 2930
BceAI	ACGGC	4 cut(s)	451, 1633, 1897, 2117
BcgI	CGANNNNNNTGC	4 cut(s)	224, 258, 2183, 2217
BciVI	GTATCC	2 cut(s)	1544, 3051
BclI	TGATCA	3 cut(s)	397, 1390, 2113
BcnI	CCSGG	4 cut(s)	121, 122, 216, 1365
BcoDI	GTCTC	7 cut(s)	277, 413, 1398, 1989, 2238, 2645, 2879
BfaI	CTAG	6 cut(s)	629, 722, 1484, 2012, 2156, 2439
BfmI	CTRYAG	4 cut(s)	1002, 1222, 1421, 2480
BfoI	RGCGCY	2 cut(s)	2009, 2151
BfuAI	ACCTGC	1 cut(s)	2582
BfuI	GTATCC	2 cut(s)	1544, 3051
BglI	GCCNNNNNGGC	1 cut(s)	2145
BmcAI	AGTACT	3 cut(s)	241, 615, 1258
Bme18I	GGWCC	5 cut(s)	1438, 1510, 1699, 2673, 2940
BmeT110I	CYCGRG	1 cut(s)	120
BmgBI	CACGTC	1 cut(s)	2165
BmrI	ACTGGG	2 cut(s)	396, 1860
BmsI	GCATC	7 cut(s)	180, 649, 853, 1425, 1607, 2167, 2793
BmuI	ACTGGG	2 cut(s)	396, 1860
BpiI	GAAGAC	2 cut(s)	1783, 1817
BplI	GAGNNNNNCTC	2 cut(s)	782, 814
BpmI	CTGGAG	1 cut(s)	1923
Bpu10I	CCTNAGC	1 cut(s)	1014
Bpu14I	TTCGAA	1 cut(s)	1746
BpuEI	CTTGAG	3 cut(s)	2043, 2456, 2708
BpuMI	CCSGG	4 cut(s)	121, 122, 216, 1365
Bsa29I	ATCGAT	1 cut(s)	1755
BsaAI	YACGTR	2 cut(s)	1199, 1338
BsaHI	GRCGYC	6 cut(s)	5, 92, 200, 837, 2148, 2467
BsaI	GGTCTC	1 cut(s)	1398
BsaWI	WCCGGW	2 cut(s)	585, 815
Bse118I	RCCGGY	3 cut(s)	54, 585, 2819
Bse1I	ACTGG	8 cut(s)	391, 1264, 1364, 1835, 1855, 2419, 2733, 3154
Bse3DI	GCAATG	2 cut(s)	26, 669
BseCI	ATCGAT	1 cut(s)	1755
BseGI	GGATG	7 cut(s)	44, 909, 1347, 1416, 2287, 2321, 2754
BseMI	GCAATG	2 cut(s)	26, 669
BseMII	CTCAG	3 cut(s)	1005, 1751, 2079
BseNI	ACTGG	8 cut(s)	391, 1264, 1364, 1835, 1855, 2419, 2733, 3154
BseRI	GAGGAG	3 cut(s)	391, 1722, 2756
BseSI	GKGCMC	1 cut(s)	489
BseX3I	CGGCCG	1 cut(s)	52
BseXI	GCAGC	3 cut(s)	805, 2015, 2930
BsgI	GTGCAG	2 cut(s)	2349, 2541
Bsh1236I	CGCG	4 cut(s)	257, 449, 1704, 2358
Bsh1285I	CGRYCG	1 cut(s)	55
BshNI	GGYRCC	3 cut(s)	968, 1024, 2147
BshTI	ACCGGT	1 cut(s)	585
BshVI	ATCGAT	1 cut(s)	1755
BsiEI	CGRYCG	1 cut(s)	55
BsiHKAI	GWGCWC	2 cut(s)	350, 2740
BsiHKCI	CYCGRG	1 cut(s)	120
BsiWI	CGTACG	1 cut(s)	432
BsmAI	GTCTC	7 cut(s)	277, 413, 1398, 1989, 2238, 2645, 2879
BsmBI	CGTCTC	3 cut(s)	277, 413, 1989
BsmI	GAATGC	4 cut(s)	1588, 2307, 2351, 2450
Bso31I	GGTCTC	1 cut(s)	1398
BsoBI	CYCGRG	1 cut(s)	120
Bsp119I	TTCGAA	1 cut(s)	1746
Bsp120I	GGGCCC	1 cut(s)	485
Bsp1286I	GDGCHC	4 cut(s)	350, 489, 1455, 2740
Bsp19I	CCATGG	3 cut(s)	530, 990, 1587
BspCNI	CTCAG	3 cut(s)	1006, 1750, 2080
BspDI	ATCGAT	1 cut(s)	1755
BspFNI	CGCG	4 cut(s)	257, 449, 1704, 2358
BspHI	TCATGA	3 cut(s)	108, 1692, 2116
BspMI	ACCTGC	1 cut(s)	2582
BspPI	GGATC	6 cut(s)	1148, 1181, 1273, 1751, 1760, 2275
BspT104I	TTCGAA	1 cut(s)	1746
BspT107I	GGYRCC	3 cut(s)	968, 1024, 2147
BspTNI	GGTCTC	1 cut(s)	1398
BsrBI	CCGCTC	2 cut(s)	99, 144
BsrDI	GCAATG	2 cut(s)	26, 669
BsrFI	RCCGGY	3 cut(s)	54, 585, 2819
BsrI	ACTGG	8 cut(s)	391, 1264, 1364, 1835, 1855, 2419, 2733, 3154
BssAI	RCCGGY	3 cut(s)	54, 585, 2819
BssNI	GRCGYC	6 cut(s)	5, 92, 200, 837, 2148, 2467
BssT1I	CCWWGG	8 cut(s)	228, 530, 990, 1055, 1329, 1587, 1815, 1895
Bst6I	CTCTTC	2 cut(s)	2882, 2993
BstACI	GRCGYC	6 cut(s)	5, 92, 200, 837, 2148, 2467
BstAPI	GCANNNNNTGC	1 cut(s)	2398
BstBAI	YACGTR	2 cut(s)	1199, 1338
BstBI	TTCGAA	1 cut(s)	1746
BstC8I	GCNNGC	8 cut(s)	56, 85, 101, 1414, 2461, 2782, 2821, 3093
BstDEI	CTNAG	4 cut(s)	575, 1014, 1737, 2088
BstDSI	CCRYGG	5 cut(s)	530, 990, 1587, 1702, 2356
BstEII	GGTNACC	1 cut(s)	2294
BstENI	CCTNNNNNAGG	1 cut(s)	1989
BstF5I	GGATG	7 cut(s)	44, 909, 1347, 1416, 2287, 2321, 2754
BstFNI	CGCG	4 cut(s)	257, 449, 1704, 2358
BstH2I	RGCGCY	2 cut(s)	2009, 2151
BstHHI	GCGC	3 cut(s)	1903, 2008, 2150
BstMAI	GTCTC	7 cut(s)	277, 413, 1398, 1989, 2238, 2645, 2879
BstMCI	CGRYCG	1 cut(s)	55
BstNSI	RCATGY	4 cut(s)	508, 1861, 2463, 3019
BstPI	GGTNACC	1 cut(s)	2294
BstSFI	CTRYAG	4 cut(s)	1002, 1222, 1421, 2480
BstSLI	GKGCMC	1 cut(s)	489
BstSNI	TACGTA	1 cut(s)	1199
BstUI	CGCG	4 cut(s)	257, 449, 1704, 2358
BstV1I	GCAGC	3 cut(s)	805, 2015, 2930
BstV2I	GAAGAC	2 cut(s)	1783, 1817
BstXI	CCANNNNNNTGG	1 cut(s)	1342
BstZI	CGGCCG	1 cut(s)	52
Bsu15I	ATCGAT	1 cut(s)	1755
BsuI	GTATCC	2 cut(s)	1544, 3051
BsuTUI	ATCGAT	1 cut(s)	1755
BtgI	CCRYGG	5 cut(s)	530, 990, 1587, 1702, 2356
BtgZI	GCGATG	2 cut(s)	1219, 2838
BtrI	CACGTC	1 cut(s)	2165
BtsCI	GGATG	7 cut(s)	44, 909, 1347, 1416, 2287, 2321, 2754
BtsI	GCAGTG	3 cut(s)	855, 2361, 3145
BveI	ACCTGC	1 cut(s)	2582
Cac8I	GCNNGC	8 cut(s)	56, 85, 101, 1414, 2461, 2782, 2821, 3093
CciI	TCATGA	3 cut(s)	108, 1692, 2116
CfoI	GCGC	3 cut(s)	1903, 2008, 2150
Cfr10I	RCCGGY	3 cut(s)	54, 585, 2819
Cfr42I	CCGCGG	2 cut(s)	1705, 2359
Cfr9I	CCCGGG	1 cut(s)	120
ClaI	ATCGAT	1 cut(s)	1755
CseI	GACGC	6 cut(s)	208, 303, 826, 1532, 2357, 2475
CsiI	ACCWGGT	1 cut(s)	2394
Csp6I	GTAC	8 cut(s)	240, 433, 614, 641, 1025, 1257, 1909, 3019
CspAI	ACCGGT	1 cut(s)	585
CviQI	GTAC	8 cut(s)	240, 433, 614, 641, 1025, 1257, 1909, 3019
DdeI	CTNAG	4 cut(s)	575, 1014, 1737, 2088
DinI	GGCGCC	1 cut(s)	2149
DraIII	CACNNNGTG	1 cut(s)	2398
DrdI	GACNNNNNNGTC	1 cut(s)	1508
DseDI	GACNNNNNNGTC	1 cut(s)	1508
EaeI	YGGCCR	7 cut(s)	52, 56, 993, 1344, 1361, 1924, 2134
EagI	CGGCCG	1 cut(s)	52
Eam1104I	CTCTTC	2 cut(s)	2882, 2993
EarI	CTCTTC	2 cut(s)	2882, 2993
Ecl136II	GAGCTC	1 cut(s)	348
EclXI	CGGCCG	1 cut(s)	52
Eco105I	TACGTA	1 cut(s)	1199
Eco130I	CCWWGG	8 cut(s)	228, 530, 990, 1055, 1329, 1587, 1815, 1895
Eco147I	AGGCCT	1 cut(s)	1981
Eco24I	GRGCYC	3 cut(s)	350, 489, 1455
Eco31I	GGTCTC	1 cut(s)	1398
Eco47I	GGWCC	5 cut(s)	1438, 1510, 1699, 2673, 2940
Eco52I	CGGCCG	1 cut(s)	52
Eco53kI	GAGCTC	1 cut(s)	348
Eco57I	CTGAAG	2 cut(s)	2007, 2977
Eco72I	CACGTG	1 cut(s)	1338
Eco88I	CYCGRG	1 cut(s)	120
Eco91I	GGTNACC	1 cut(s)	2294
EcoICRI	GAGCTC	1 cut(s)	348
EcoNI	CCTNNNNNAGG	1 cut(s)	1989
EcoO109I	RGGNCCY	3 cut(s)	1438, 1510, 2940
EcoO65I	GGTNACC	1 cut(s)	2294
EcoT14I	CCWWGG	8 cut(s)	228, 530, 990, 1055, 1329, 1587, 1815, 1895
EcoT22I	ATGCAT	2 cut(s)	1218, 2452
EcoT38I	GRGCYC	3 cut(s)	350, 489, 1455
EgeI	GGCGCC	1 cut(s)	2149
EheI	GGCGCC	1 cut(s)	2149
ErhI	CCWWGG	8 cut(s)	228, 530, 990, 1055, 1329, 1587, 1815, 1895
Esp3I	CGTCTC	3 cut(s)	277, 413, 1989
FauI	CCCGC	5 cut(s)	92, 238, 1899, 2773, 3076
FbaI	TGATCA	3 cut(s)	397, 1390, 2113
FblI	GTMKAC	1 cut(s)	1089
FokI	GGATG	7 cut(s)	31, 896, 1354, 1403, 2294, 2328, 2741
FriOI	GRGCYC	3 cut(s)	350, 489, 1455
FseI	GGCCGGCC	1 cut(s)	58
FspBI	CTAG	6 cut(s)	629, 722, 1484, 2012, 2156, 2439
GlaI	GCGC	3 cut(s)	1902, 2007, 2149
GsuI	CTGGAG	1 cut(s)	1923
HaeII	RGCGCY	2 cut(s)	2009, 2151
HgaI	GACGC	6 cut(s)	208, 303, 826, 1532, 2357, 2475
HhaI	GCGC	3 cut(s)	1903, 2008, 2150
Hin1I	GRCGYC	6 cut(s)	5, 92, 200, 837, 2148, 2467
Hin6I	GCGC	3 cut(s)	1901, 2006, 2148
HinP1I	GCGC	3 cut(s)	1901, 2006, 2148
HindIII	AAGCTT	1 cut(s)	1238
Hpy166II	GTNNAC	3 cut(s)	855, 1090, 1501
Hpy188I	TCNGA	8 cut(s)	609, 826, 958, 1740, 1765, 1956, 2669, 2981
Hpy8I	GTNNAC	3 cut(s)	855, 1090, 1501
Hpy99I	CGWCG	8 cut(s)	53, 97, 202, 291, 319, 842, 1352, 2469
HpyCH4IV	ACGT	5 cut(s)	92, 431, 1198, 1337, 2164
HpyF3I	CTNAG	4 cut(s)	575, 1014, 1737, 2088
HpySE526I	ACGT	5 cut(s)	92, 431, 1198, 1337, 2164
Hsp92I	GRCGYC	6 cut(s)	5, 92, 200, 837, 2148, 2467
HspAI	GCGC	3 cut(s)	1901, 2006, 2148
KasI	GGCGCC	1 cut(s)	2147
KflI	GGGWCCC	1 cut(s)	1510
KpnI	GGTACC	1 cut(s)	1028
KroI	GCCGGC	2 cut(s)	54, 2819
KroNI	GCCGGC	2 cut(s)	56, 2821
Ksp22I	TGATCA	3 cut(s)	397, 1390, 2113
KspI	CCGCGG	2 cut(s)	1705, 2359
LmnI	GCTCC	4 cut(s)	378, 1450, 1574, 1942
Lsp1109I	GCAGC	3 cut(s)	805, 2015, 2930
LweI	GCATC	7 cut(s)	180, 649, 853, 1425, 1607, 2167, 2793
MabI	ACCWGGT	1 cut(s)	2394
MaeI	CTAG	6 cut(s)	629, 722, 1484, 2012, 2156, 2439
MaeII	ACGT	5 cut(s)	92, 431, 1198, 1337, 2164
MaeIII	GTNAC	8 cut(s)	886, 1070, 1643, 2272, 2287, 2294, 2345, 2902
MbiI	CCGCTC	2 cut(s)	99, 144
MhlI	GDGCHC	4 cut(s)	350, 489, 1455, 2740
MlsI	TGGCCA	1 cut(s)	1926
MluCI	AATT	5 cut(s)	77, 175, 2053, 2579, 2790
MluI	ACGCGT	1 cut(s)	447
MluNI	TGGCCA	1 cut(s)	1926
Mly113I	GGCGCC	1 cut(s)	2148
MlyI	GAGTC	3 cut(s)	467, 2757, 2979
MmeI	TCCRAC	2 cut(s)	1118, 2237
Mox20I	TGGCCA	1 cut(s)	1926
Mph1103I	ATGCAT	2 cut(s)	1218, 2452
MroNI	GCCGGC	2 cut(s)	54, 2819
MscI	TGGCCA	1 cut(s)	1926
MseI	TTAA	3 cut(s)	1976, 2804, 2894
MslI	CAYNNNNRTG	4 cut(s)	185, 1340, 1496, 2310
Msp20I	TGGCCA	1 cut(s)	1926
MspA1I	CMGCKG	4 cut(s)	1704, 2358, 2750, 2921
Mva1269I	GAATGC	4 cut(s)	1588, 2307, 2351, 2450
MvnI	CGCG	4 cut(s)	257, 449, 1704, 2358
NaeI	GCCGGC	2 cut(s)	56, 2821
NarI	GGCGCC	1 cut(s)	2148
NciI	CCSGG	4 cut(s)	121, 122, 216, 1365
NcoI	CCATGG	3 cut(s)	530, 990, 1587
NgoMIV	GCCGGC	2 cut(s)	54, 2819
NmeAIII	GCCGAG	2 cut(s)	306, 1021
NmuCI	GTSAC	5 cut(s)	886, 1643, 2272, 2287, 2345
NsiI	ATGCAT	2 cut(s)	1218, 2452
NspI	RCATGY	4 cut(s)	508, 1861, 2463, 3019
NspV	TTCGAA	1 cut(s)	1746
OliI	CACNNNNGTG	2 cut(s)	1496, 2310
PaeI	GCATGC	1 cut(s)	2463
PagI	TCATGA	3 cut(s)	108, 1692, 2116
PceI	AGGCCT	1 cut(s)	1981
PciI	ACATGT	1 cut(s)	3015
PcsI	WCGNNNNNNNCGW	3 cut(s)	428, 846, 1752
PctI	GAATGC	4 cut(s)	1588, 2307, 2351, 2450
PdiI	GCCGGC	2 cut(s)	56, 2821
PfeI	GAWTC	8 cut(s)	601, 646, 742, 1060, 1633, 1743, 1964, 2072
Pfl23II	CGTACG	1 cut(s)	432
PfoI	TCCNGGA	1 cut(s)	1546
PinAI	ACCGGT	1 cut(s)	585
PleI	GAGTC	3 cut(s)	467, 2757, 2979
PluTI	GGCGCC	1 cut(s)	2151
PmaCI	CACGTG	1 cut(s)	1338
PmlI	CACGTG	1 cut(s)	1338
PpsI	GAGTC	3 cut(s)	467, 2757, 2979
Ppu21I	YACGTR	2 cut(s)	1199, 1338
PpuMI	RGGWCCY	3 cut(s)	1438, 1510, 2940
PscI	ACATGT	1 cut(s)	3015
PshBI	ATTAAT	1 cut(s)	2894
Psp124BI	GAGCTC	1 cut(s)	350
Psp5II	RGGWCCY	3 cut(s)	1438, 1510, 2940
PspCI	CACGTG	1 cut(s)	1338
PspEI	GGTNACC	1 cut(s)	2294
PspLI	CGTACG	1 cut(s)	432
PspOMI	GGGCCC	1 cut(s)	485
PspPPI	RGGWCCY	3 cut(s)	1438, 1510, 2940
PsrI	GAACNNNNNNTAC	2 cut(s)	1145, 1177
PvuII	CAGCTG	1 cut(s)	2921
RigI	GGCCGGCC	1 cut(s)	58
RsaI	GTAC	8 cut(s)	241, 434, 615, 642, 1026, 1258, 1910, 3020
RsaNI	GTAC	8 cut(s)	240, 433, 614, 641, 1025, 1257, 1909, 3019
RseI	CAYNNNNRTG	4 cut(s)	185, 1340, 1496, 2310
SacI	GAGCTC	1 cut(s)	350
SacII	CCGCGG	2 cut(s)	1705, 2359
SaqAI	TTAA	3 cut(s)	1976, 2804, 2894
ScaI	AGTACT	3 cut(s)	241, 615, 1258
SchI	GAGTC	3 cut(s)	467, 2757, 2979
SduI	GDGCHC	4 cut(s)	350, 489, 1455, 2740
SexAI	ACCWGGT	1 cut(s)	2394
SfaNI	GCATC	7 cut(s)	180, 649, 853, 1425, 1607, 2167, 2793
SfcI	CTRYAG	4 cut(s)	1002, 1222, 1421, 2480
SfoI	GGCGCC	1 cut(s)	2149
Sfr303I	CCGCGG	2 cut(s)	1705, 2359
SfuI	TTCGAA	1 cut(s)	1746
SgrBI	CCGCGG	2 cut(s)	1705, 2359
SinI	GGWCC	5 cut(s)	1438, 1510, 1699, 2673, 2940
SmaI	CCCGGG	1 cut(s)	122
SmiMI	CAYNNNNRTG	4 cut(s)	185, 1340, 1496, 2310
SmlI	CTYRAG	3 cut(s)	2058, 2471, 2687
SmoI	CTYRAG	3 cut(s)	2058, 2471, 2687
SnaBI	TACGTA	1 cut(s)	1199
SphI	GCATGC	1 cut(s)	2463
Sse9I	AATT	5 cut(s)	77, 175, 2053, 2579, 2790
SseBI	AGGCCT	1 cut(s)	1981
SspDI	GGCGCC	1 cut(s)	2147
SspI	AATATT	3 cut(s)	369, 2602, 2892
SspMI	CTAG	6 cut(s)	629, 722, 1484, 2012, 2156, 2439
SstI	GAGCTC	1 cut(s)	350
StuI	AGGCCT	1 cut(s)	1981
StyI	CCWWGG	8 cut(s)	228, 530, 990, 1055, 1329, 1587, 1815, 1895
TaiI	ACGT	5 cut(s)	95, 434, 1201, 1340, 2167
TasI	AATT	5 cut(s)	77, 175, 2053, 2579, 2790
TatI	WGTACW	4 cut(s)	239, 613, 640, 1256
TauI	GCSGC	9 cut(s)	196, 260, 306, 309, 805, 1114, 2139, 2361, 2750
TfiI	GAWTC	8 cut(s)	601, 646, 742, 1060, 1633, 1743, 1964, 2072
Tru1I	TTAA	3 cut(s)	1976, 2804, 2894
Tru9I	TTAA	3 cut(s)	1976, 2804, 2894
TseFI	GTSAC	5 cut(s)	886, 1643, 2272, 2287, 2345
TseI	GCWGC	3 cut(s)	793, 2003, 2918
Tsp45I	GTSAC	5 cut(s)	886, 1643, 2272, 2287, 2345
TspDTI	ATGAA	9 cut(s)	54, 515, 755, 1595, 1681, 2133, 2572, 2869, 3044
TspGWI	ACGGA	4 cut(s)	37, 304, 1365, 2515
TspMI	CCCGGG	1 cut(s)	120
VpaK11BI	GGWCC	5 cut(s)	1438, 1510, 1699, 2673, 2940
VspI	ATTAAT	1 cut(s)	2894
XagI	CCTNNNNNAGG	1 cut(s)	1989
XapI	RAATTY	3 cut(s)	77, 2053, 2790
XbaI	TCTAGA	1 cut(s)	2438
XceI	RCATGY	4 cut(s)	508, 1861, 2463, 3019
XcmI	CCANNNNNNNNNTGG	3 cut(s)	663, 1585, 2419
XmaI	CCCGGG	1 cut(s)	120
XmiI	GTMKAC	1 cut(s)	1089
XspI	CTAG	6 cut(s)	629, 722, 1484, 2012, 2156, 2439
ZraI	GACGTC	1 cut(s)	93
ZrmI	AGTACT	3 cut(s)	241, 615, 1258
Zsp2I	ATGCAT	2 cut(s)	1218, 2452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.