Rh4DG134500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
26788065 .. 26789596
1532 bp
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UTR
Exon/CDS
Intron
Rh4DG134500.1

Sequence Viewer

Length: 189 bp
ATGATACTGAAGATGAGAAGCAAAAGAAAGAGTAGCAATGGAAAAGATTTGGATGAGAAAGGGAGAGAAGCTAGTGAACTCGAGTATGCATGTAGCAGATTTTTCCATTACGGAATCAAAAATCAACTGGTGGGATTTCCTCCTGTAATCTTCTATTTGCTTGGCGGGAAAAGTTTGGAGCAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

62

Amino Acids

7.13

Weight (kDa)

9.21

Isoelectric Point (pI)

64.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020073)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 165
AcuI CTGAAG 1 cut(s) 29
AluBI AGCT 1 cut(s) 71
AluI AGCT 1 cut(s) 71
Ama87I CYCGRG 1 cut(s) 80
AvaI CYCGRG 1 cut(s) 80
BfaI CTAG 1 cut(s) 72
BmeT110I CYCGRG 1 cut(s) 80
Bse1I ACTGG 1 cut(s) 132
Bse3DI GCAATG 1 cut(s) 43
BseGI GGATG 1 cut(s) 58
BseMI GCAATG 1 cut(s) 43
BseNI ACTGG 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 80
BspACI CCGC 1 cut(s) 165
BsrDI GCAATG 1 cut(s) 43
BsrI ACTGG 1 cut(s) 132
BstF5I GGATG 1 cut(s) 58
BstNSI RCATGY 1 cut(s) 93
BtsCI GGATG 1 cut(s) 58
CviAII CATG 1 cut(s) 90
CviJI RGCY 1 cut(s) 71
CviKI_1 RGCY 1 cut(s) 71
Eco57I CTGAAG 1 cut(s) 29
Eco88I CYCGRG 1 cut(s) 80
EcoT22I ATGCAT 1 cut(s) 91
FaeI CATG 1 cut(s) 93
FaiI YATR 2 cut(s) 87, 91
FatI CATG 1 cut(s) 89
FauI CCCGC 1 cut(s) 158
FokI GGATG 1 cut(s) 65
FspBI CTAG 1 cut(s) 72
Hin1II CATG 1 cut(s) 93
HinfI GANTC 1 cut(s) 114
Hpy166II GTNNAC 1 cut(s) 77
Hpy8I GTNNAC 1 cut(s) 77
HpyCH4V TGCA 1 cut(s) 89
Hsp92II CATG 1 cut(s) 93
LmnI GCTCC 1 cut(s) 178
LpnPI CCDG 2 cut(s) 113, 156
MaeI CTAG 1 cut(s) 72
MboII GAAGA 2 cut(s) 22, 142
MnlI CCTC 1 cut(s) 150
Mph1103I ATGCAT 1 cut(s) 91
NlaIII CATG 1 cut(s) 93
NsiI ATGCAT 1 cut(s) 91
NspI RCATGY 1 cut(s) 93
PaeR7I CTCGAG 1 cut(s) 80
PfeI GAWTC 1 cut(s) 114
PspXI VCTCGAGB 1 cut(s) 80
SetI ASST 1 cut(s) 73
Sfr274I CTCGAG 1 cut(s) 80
SgeI CNNG 8 cut(s) 84, 92, 94, 102, 140, 155, 173, 178
SlaI CTCGAG 1 cut(s) 80
SmlI CTYRAG 1 cut(s) 80
SmoI CTYRAG 1 cut(s) 80
SsiI CCGC 1 cut(s) 165
SspMI CTAG 1 cut(s) 72
TaqI TCGA 1 cut(s) 81
TfiI GAWTC 1 cut(s) 114
TspGWI ACGGA 1 cut(s) 126
XceI RCATGY 1 cut(s) 93
XhoI CTCGAG 1 cut(s) 80
XspI CTAG 1 cut(s) 72
Zsp2I ATGCAT 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.