Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005489

Physical Location & Seq

Genomic Coordinates Forward (+)

34763293 .. 34769501

Gene Structure 6209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG264600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGAGTGTGGTGGGGATTGATATCGGAAATGAGAACTGTGTGATTGCGGTGGTGAAGCAGCGGGGGATTGATGTTTTGTTGAATGAGGAATCGAAACGTGAAACCCCGGCTGTGGTTTGTTTCGGCGAGAAGCAAAGGTTTCTCGGGTCTGCTGCTTCTGCCTCTGCAATGATGCACCCAAAATCGACGGTTTCGCAGGTAAAGAGGCTTATTGGTAGGAGATTTAGGGAGCCTGATGTTCAAAAGGACCTTCGAATGTTGCCTTTTCAAACTTCTGAAGGCCCAGACGGTGGCATTTTGATACATTTGAGTTACTTGGGTGGAATGCATACATTTACACCGGTTCAAATTACAGCGATGCTTTTTGCACATTTGAGAGAGATTATAGAGAAGAATCTGGAAATGCCTGTTTCAGATTGTGTGATCAGTATTCCATCGTACTTTACAGACTTGCAGAGACGCGCATATTTGGATGCTGCGATAGTTGCTGGGTTGAAGCCTTTGAGGTTGATGCATGACTGTACTGCAACTGCTCTCAGTTATGGGATTTACAAAACAGATTTCCCCAGTTCTGGTCCAACTTACGTGGCATTTGTTGACATTGGCCATTGTGATACCCAGGTCTCTGTTGCATCTTTTGAGTCTGGGCATATGACGATGCGATCTCACGCTTTTGATAGAAGCTTGGGAGGGAGAGACTTTGATGAGGTCTTGTTTAGTCATTTTGCTGCACAGTTCAAGGAGCAGTATAGAATTGATGTGTACTCTAATGTCAAGGCATGTGTCAGGCTAAGGGCAGCATGCGAGAAGCTGAAAAAGGTTTTGAGTGCAAATGCGGAGGCACCTCTTAATATTGAGTGTTTAATGGATGAGAAAGATGTTAAGGGTTTCATTAAAAGGGAAGAATTTGAAATGCTGGCTTCAAGTTTGTTGGAGAGGATTCGTGTTCCTTGTAGTAAAGCTTTAGCTGATGCAGGTTTAACCGCCGACATGATTCATTCTGTAGAGCTTGTTGGGTCAGGGTCTAGGATCCCAGCTATTGCTAGAGCATTAGTTTCTCTATTCAAGGTAGAACCTCGTCGGACACTGAATGCTAGTGAATGTGTAGCACGTGGATGTGCTCTTCAATGTGCAATGCTAAGTCCTGTTTTCCGAGTCAGAGAATATGAGGTTCAAGATGCTATTCCTTTCACTATAGGATTCTGTTCAGATGAAGGTCCAATTGGCACTGGCTCGGATGGCGTCCTGTTTCCAAAAGGCCAACCCATCCCAAGTGCAAAAGTATTGACACTTCAACGAAGCAGTTTATTCCATTTGGAAGCATTGTATGCTGATCCCAGTGAACTGCCTGCTGGCGCATCTCCAGAAATTAGTTGTTTTACGATTGGTCCTTTCCAAGGCTTCCATAGTGACAAGACGAGGGTTAAAGTTAAAATTCAATTAGACCTCCATGGTATTGTCTCTGTTGTATCAGCTAGGATGGTGGAAGAACATGGAGACGATTCAAAAATGGACCCGATGGACACTGATTGTGTAACTGCTTCTGTTTCATCTGAGGCAGCTGAAGACAGGTTTCAAGAGAGTATGCAGTCCAAATCTTCACATGCTACCGGTGATGGTAGACACAACAAAGCCACTACCAGGCTAGATATACCCATTAGTGAAAATATATACGGTGGAATGACCAAGGCTGAACTTTCAGAAGCTCAAGGAAAAGAATTTCAGTTAGCTCAACAGGACAGAGCTATGGAACAAACCAAAGACAAAAAGAATGCGTTGGAATCTTATGTCTATGAGATGCGGAATAAGCTCTTCAACACATATCGAAGCTTCGCAAGTGACCAAGAGAGGGAGGGCATCTCCAGGAGCCTACAGCAGACAGAGGACTGGCTTTATGATGATGGAGATGATGAAACTGAAAATGCCTATACTTCAAAGCTGGAAGATCTTAAGAAGGTTCTTTCCTCTTCAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04530 ko04612 map04530 map04612

Pfam Domains

Protein Families

HSP70

Protein Analysis

658

Amino Acids

72.73

Weight (kDa)

5.58

Isoelectric Point (pI)

45.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	3 - 655	3e-145	Hsp70 protein
MreB_Mbl	PF06723	116 - 375	3.4e-10	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005489)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11660 AT1G11660 AT1G11660 AT1G11660
fragaria_vesca	FvH4_3g22620 FvH4_3g22620 FvH4_3g22620 FvH4_3g22620 FvH4_3g22620
malus_domestica	MD03G1201700.v1.1 MD03G1201800.v1.1 MD11G1218900.v1.1
prunus_persica	Prupe.4G212200_v2.0.a1
pyrus_communis	pycom03g15300 pycom03g15320 pycom11g19290
rosa_chinensis	RchiOBHm_Chr5g0039371
rosa_laevigata	RLG00000033908
rosa_multiflora	Rmu_co8453851.1_g000001 Rmu_sc0006937.1_g000008 Rmu_sc0007310.1_g000013
rosa_roxburghii	Rroxscaffold_1G00040520 Rroxscaffold_1G00041830
rosa_rugosa	Rorug05G0178400
rosa_samantha	Rh5AG264600 Rh5BG269600 Rh5CG302600 Rh5DG277400
rosa_wichuraiana	Rw5G024820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	187, 965
AccB1I	GGYRCC	1 cut(s)	841
AccB7I	CCANNNNNTGG	1 cut(s)	290
AccI	GTMKAC	1 cut(s)	1621
AccII	CGCG	1 cut(s)	462
AciI	CCGC	5 cut(s)	47, 61, 836, 984, 1801
AclWI	GGATC	3 cut(s)	1024, 1037, 1328
AcoI	YGGCCR	1 cut(s)	604
AcsI	RAATTY	3 cut(s)	905, 1434, 1718
AcuI	CTGAAG	2 cut(s)	297, 1584
AcvI	CACGTG	1 cut(s)	1112
AcyI	GRCGYC	1 cut(s)	1242
AfaI	GTAC	3 cut(s)	440, 523, 764
AfiI	CCNNNNNNNGG	6 cut(s)	112, 290, 572, 1397, 1641, 1849
AflII	CTTAAG	1 cut(s)	1949
AgeI	ACCGGT	2 cut(s)	340, 1610
AjnI	CCWGG	3 cut(s)	618, 1640, 1862
AjuI	GAANNNNNNNTTGG	2 cut(s)	1206, 1238
Alw21I	GWGCWC	1 cut(s)	1123
Alw26I	GTCTC	5 cut(s)	451, 628, 690, 1465, 1491
AlwI	GGATC	3 cut(s)	1024, 1037, 1328
Ama87I	CYCGRG	1 cut(s)	143
AoxI	GGCC	3 cut(s)	280, 604, 1258
ApeKI	GCWGC	6 cut(s)	58, 152, 476, 728, 797, 1559
ApoI	RAATTY	3 cut(s)	905, 1434, 1718
AsiGI	ACCGGT	2 cut(s)	340, 1610
AspLEI	GCGC	2 cut(s)	464, 1358
AspS9I	GGNCC	6 cut(s)	247, 281, 575, 1217, 1388, 1513
AsuC2I	CCSGG	1 cut(s)	107
AsuHPI	GGTGA	2 cut(s)	64, 1625
AsuII	TTCGAA	1 cut(s)	253
AvaI	CYCGRG	1 cut(s)	143
AvaII	GGWCC	5 cut(s)	247, 575, 1217, 1388, 1513
BaeI	ACNNNNGTAYC	2 cut(s)	606, 639
BalI	TGGCCA	1 cut(s)	606
BamHI	GGATCC	1 cut(s)	1029
BanI	GGYRCC	1 cut(s)	841
BarI	GAAGNNNNNNTAC	2 cut(s)	1275, 1307
BbrPI	CACGTG	1 cut(s)	1112
BbsI	GAAGAC	1 cut(s)	1572
Bbv12I	GWGCWC	1 cut(s)	1123
BbvI	GCAGC	6 cut(s)	70, 139, 463, 715, 809, 1571
BccI	CCATC	7 cut(s)	442, 1232, 1274, 1474, 1513, 1610, 1895
BciT130I	CCWGG	3 cut(s)	620, 1642, 1864
BclI	TGATCA	1 cut(s)	423
BcnI	CCSGG	1 cut(s)	107
BcoDI	GTCTC	5 cut(s)	451, 628, 690, 1465, 1491
BfaI	CTAG	5 cut(s)	1026, 1044, 1095, 1476, 1646
BfmI	CTRYAG	3 cut(s)	1002, 1194, 1871
BfrI	CTTAAG	1 cut(s)	1949
BfuAI	ACCTGC	2 cut(s)	187, 965
BglII	AGATCT	1 cut(s)	1945
BisI	GCNGC	6 cut(s)	59, 153, 477, 729, 798, 1560
BlsI	GCNGC	6 cut(s)	60, 154, 478, 730, 799, 1561
Bme1390I	CCNGG	4 cut(s)	107, 620, 1642, 1864
Bme18I	GGWCC	5 cut(s)	247, 575, 1217, 1388, 1513
BmeT110I	CYCGRG	1 cut(s)	143
BmgT120I	GGNCC	6 cut(s)	247, 281, 575, 1217, 1388, 1513
BmiI	GGNNCC	5 cut(s)	231, 843, 1031, 1515, 1868
BmrFI	CCNGG	4 cut(s)	107, 620, 1642, 1864
BmrI	ACTGGG	2 cut(s)	561, 1332
BmuI	ACTGGG	2 cut(s)	561, 1332
BpiI	GAAGAC	1 cut(s)	1572
BplI	GAGNNNNNCTC	2 cut(s)	1844, 1876
BpmI	CTGGAG	2 cut(s)	1347, 1846
Bpu10I	CCTNAGC	1 cut(s)	791
Bpu14I	TTCGAA	1 cut(s)	253
BpuEI	CTTGAG	1 cut(s)	1692
BpuMI	CCSGG	1 cut(s)	107
BsaAI	YACGTR	2 cut(s)	586, 1112
BsaBI	GATNNNNATC	1 cut(s)	20
BsaHI	GRCGYC	1 cut(s)	1242
BsaI	GGTCTC	1 cut(s)	628
BsaJI	CCNNGG	5 cut(s)	105, 618, 1396, 1450, 1686
BsaWI	WCCGGW	2 cut(s)	340, 1610
Bsc4I	CCNNNNNNNGG	6 cut(s)	112, 290, 572, 1397, 1641, 1849
Bse118I	RCCGGY	2 cut(s)	340, 1610
Bse1I	ACTGG	4 cut(s)	567, 1234, 1338, 1892
Bse3DI	GCAATG	2 cut(s)	174, 1140
Bse8I	GATNNNNATC	1 cut(s)	20
BseBI	CCWGG	3 cut(s)	620, 1642, 1864
BseDI	CCNNGG	5 cut(s)	105, 618, 1396, 1450, 1686
BseGI	GGATG	6 cut(s)	478, 874, 1121, 1243, 1266, 1485
BseJI	GATNNNNATC	1 cut(s)	20
BseLI	CCNNNNNNNGG	6 cut(s)	112, 290, 572, 1397, 1641, 1849
BseMI	GCAATG	2 cut(s)	174, 1140
BseMII	CTCAG	2 cut(s)	550, 1545
BseNI	ACTGG	4 cut(s)	567, 1234, 1338, 1892
BseXI	GCAGC	6 cut(s)	70, 139, 463, 715, 809, 1571
BseYI	CCCAGC	2 cut(s)	488, 1033
BsgI	GTGCAG	1 cut(s)	714
Bsh1236I	CGCG	1 cut(s)	462
BshFI	GGCC	3 cut(s)	282, 606, 1260
BshNI	GGYRCC	1 cut(s)	841
BshTI	ACCGGT	2 cut(s)	340, 1610
BsiHKAI	GWGCWC	1 cut(s)	1123
BsiHKCI	CYCGRG	1 cut(s)	143
BsiSI	CCGG	3 cut(s)	107, 341, 1611
BslI	CCNNNNNNNGG	6 cut(s)	112, 290, 572, 1397, 1641, 1849
BsmAI	GTCTC	5 cut(s)	451, 628, 690, 1465, 1491
BsmBI	CGTCTC	2 cut(s)	451, 1491
BsmI	GAATGC	3 cut(s)	330, 1096, 1777
BsnI	GGCC	3 cut(s)	282, 606, 1260
Bso31I	GGTCTC	1 cut(s)	628
BsoBI	CYCGRG	1 cut(s)	143
Bsp119I	TTCGAA	1 cut(s)	253
Bsp1286I	GDGCHC	1 cut(s)	1123
Bsp143I	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
Bsp19I	CCATGG	1 cut(s)	1450
BspACI	CCGC	5 cut(s)	47, 61, 836, 984, 1801
BspANI	GGCC	3 cut(s)	282, 606, 1260
BspCNI	CTCAG	2 cut(s)	549, 1546
BspFNI	CGCG	1 cut(s)	462
BspLI	GGNNCC	5 cut(s)	231, 843, 1031, 1515, 1868
BspMI	ACCTGC	2 cut(s)	187, 965
BspPI	GGATC	3 cut(s)	1024, 1037, 1328
BspQI	GCTCTTC	2 cut(s)	1128, 1817
BspT104I	TTCGAA	1 cut(s)	253
BspT107I	GGYRCC	1 cut(s)	841
BspTI	CTTAAG	1 cut(s)	1949
BspTNI	GGTCTC	1 cut(s)	628
BsrDI	GCAATG	2 cut(s)	174, 1140
BsrFI	RCCGGY	2 cut(s)	340, 1610
BsrI	ACTGG	4 cut(s)	567, 1234, 1338, 1892
BssAI	RCCGGY	2 cut(s)	340, 1610
BssECI	CCNNGG	5 cut(s)	105, 618, 1396, 1450, 1686
BssMI	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
BssNI	GRCGYC	1 cut(s)	1242
BssT1I	CCWWGG	3 cut(s)	1396, 1450, 1686
Bst2UI	CCWGG	3 cut(s)	620, 1642, 1864
Bst4CI	ACNGT	6 cut(s)	38, 190, 290, 521, 735, 1676
Bst6I	CTCTTC	3 cut(s)	1128, 1817, 1972
BstACI	GRCGYC	1 cut(s)	1242
BstAFI	CTTAAG	1 cut(s)	1949
BstAPI	GCANNNNNTGC	1 cut(s)	1328
BstBAI	YACGTR	2 cut(s)	586, 1112
BstBI	TTCGAA	1 cut(s)	253
BstC8I	GCNNGC	4 cut(s)	802, 918, 1350, 1354
BstDEI	CTNAG	4 cut(s)	536, 791, 1139, 1554
BstDSI	CCRYGG	1 cut(s)	1450
BstENI	CCTNNNNNAGG	1 cut(s)	1395
BstF5I	GGATG	6 cut(s)	478, 874, 1121, 1243, 1266, 1485
BstFNI	CGCG	1 cut(s)	462
BstHHI	GCGC	2 cut(s)	464, 1358
BstKTI	GATC	5 cut(s)	426, 665, 1032, 1336, 1948
BstMAI	GTCTC	5 cut(s)	451, 628, 690, 1465, 1491
BstMBI	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
BstMWI	GCNNNNNNNGC	5 cut(s)	158, 485, 1239, 1328, 1807
BstNI	CCWGG	3 cut(s)	620, 1642, 1864
BstNSI	RCATGY	3 cut(s)	783, 804, 1607
BstSCI	CCNGG	4 cut(s)	105, 618, 1640, 1862
BstSFI	CTRYAG	3 cut(s)	1002, 1194, 1871
BstUI	CGCG	1 cut(s)	462
BstV1I	GCAGC	6 cut(s)	70, 139, 463, 715, 809, 1571
BstV2I	GAAGAC	1 cut(s)	1572
BstX2I	RGATCY	2 cut(s)	1029, 1945
BstYI	RGATCY	2 cut(s)	1029, 1945
BsuRI	GGCC	3 cut(s)	282, 606, 1260
BtgI	CCRYGG	1 cut(s)	1450
BtgZI	GCGATG	1 cut(s)	371
BtsCI	GGATG	6 cut(s)	478, 874, 1121, 1243, 1266, 1485
BtsIMutI	CAGTG	4 cut(s)	1085, 1227, 1345, 1524
BveI	ACCTGC	2 cut(s)	187, 965
Cac8I	GCNNGC	4 cut(s)	802, 918, 1350, 1354
CfoI	GCGC	2 cut(s)	464, 1358
Cfr10I	RCCGGY	2 cut(s)	340, 1610
Cfr13I	GGNCC	6 cut(s)	247, 281, 575, 1217, 1388, 1513
CseI	GACGC	2 cut(s)	468, 1231
Csp6I	GTAC	3 cut(s)	439, 522, 763
CspAI	ACCGGT	2 cut(s)	340, 1610
CspCI	CAANNNNNGTGG	2 cut(s)	567, 602
CviAII	CATG	7 cut(s)	515, 780, 801, 991, 1451, 1493, 1604
CviQI	GTAC	3 cut(s)	439, 522, 763
DdeI	CTNAG	4 cut(s)	536, 791, 1139, 1554
DpnI	GATC	5 cut(s)	425, 664, 1031, 1335, 1947
DpnII	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
EaeI	YGGCCR	1 cut(s)	604
Eam1104I	CTCTTC	3 cut(s)	1128, 1817, 1972
EarI	CTCTTC	3 cut(s)	1128, 1817, 1972
Eco130I	CCWWGG	3 cut(s)	1396, 1450, 1686
Eco31I	GGTCTC	1 cut(s)	628
Eco32I	GATATC	1 cut(s)	22
Eco47I	GGWCC	5 cut(s)	247, 575, 1217, 1388, 1513
Eco57I	CTGAAG	2 cut(s)	297, 1584
Eco72I	CACGTG	1 cut(s)	1112
Eco88I	CYCGRG	1 cut(s)	143
EcoNI	CCTNNNNNAGG	1 cut(s)	1395
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRII	CCWGG	3 cut(s)	618, 1640, 1862
EcoRV	GATATC	1 cut(s)	22
EcoT14I	CCWWGG	3 cut(s)	1396, 1450, 1686
EcoT22I	ATGCAT	2 cut(s)	330, 516
ErhI	CCWWGG	3 cut(s)	1396, 1450, 1686
Esp3I	CGTCTC	2 cut(s)	451, 1491
FaeI	CATG	7 cut(s)	518, 783, 804, 994, 1454, 1496, 1607
FatI	CATG	7 cut(s)	514, 779, 800, 990, 1450, 1492, 1603
FauI	CCCGC	1 cut(s)	54
FauNDI	CATATG	1 cut(s)	651
FbaI	TGATCA	1 cut(s)	423
FblI	GTMKAC	1 cut(s)	1621
Fnu4HI	GCNGC	6 cut(s)	59, 153, 477, 729, 798, 1560
FokI	GGATG	6 cut(s)	485, 881, 1128, 1250, 1253, 1492
Fsp4HI	GCNGC	6 cut(s)	59, 153, 477, 729, 798, 1560
FspBI	CTAG	5 cut(s)	1026, 1044, 1095, 1476, 1646
GlaI	GCGC	2 cut(s)	463, 1357
GluI	GCNGC	6 cut(s)	59, 153, 477, 729, 798, 1560
GsaI	CCCAGC	2 cut(s)	492, 1037
GsuI	CTGGAG	2 cut(s)	1347, 1846
HaeIII	GGCC	3 cut(s)	282, 606, 1260
HapII	CCGG	3 cut(s)	107, 341, 1611
HgaI	GACGC	2 cut(s)	468, 1231
HhaI	GCGC	2 cut(s)	464, 1358
Hin1I	GRCGYC	1 cut(s)	1242
Hin1II	CATG	7 cut(s)	518, 783, 804, 994, 1454, 1496, 1607
Hin6I	GCGC	2 cut(s)	462, 1356
HinP1I	GCGC	2 cut(s)	462, 1356
HincII	GTYRAC	1 cut(s)	598
HindII	GTYRAC	1 cut(s)	598
HindIII	AAGCTT	3 cut(s)	682, 960, 1828
HinfI	GANTC	9 cut(s)	89, 394, 641, 940, 994, 1155, 1200, 1502, 1781
HpaII	CCGG	3 cut(s)	107, 341, 1611
HphI	GGTGA	2 cut(s)	64, 1625
Hpy166II	GTNNAC	4 cut(s)	598, 763, 1343, 1622
Hpy188III	TCNNGA	4 cut(s)	398, 1175, 1364, 1577
Hpy8I	GTNNAC	4 cut(s)	598, 763, 1343, 1622
Hpy99I	CGWCG	2 cut(s)	190, 1083
HpyAV	CCTTC	4 cut(s)	260, 272, 1208, 1948
HpyCH4III	ACNGT	6 cut(s)	38, 190, 290, 521, 735, 1676
HpyCH4IV	ACGT	3 cut(s)	97, 585, 1111
HpyF10VI	GCNNNNNNNGC	5 cut(s)	158, 485, 1239, 1328, 1807
HpyF3I	CTNAG	4 cut(s)	536, 791, 1139, 1554
HpySE526I	ACGT	3 cut(s)	97, 585, 1111
Hsp92I	GRCGYC	1 cut(s)	1242
Hsp92II	CATG	7 cut(s)	518, 783, 804, 994, 1454, 1496, 1607
HspAI	GCGC	2 cut(s)	462, 1356
Ksp22I	TGATCA	1 cut(s)	423
Kzo9I	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
LguI	GCTCTTC	2 cut(s)	1128, 1817
LmnI	GCTCC	3 cut(s)	229, 742, 1866
Lsp1109I	GCAGC	6 cut(s)	70, 139, 463, 715, 809, 1571
MaeI	CTAG	5 cut(s)	1026, 1044, 1095, 1476, 1646
MaeII	ACGT	3 cut(s)	97, 585, 1111
MaeIII	GTNAC	4 cut(s)	311, 1409, 1534, 1838
MalI	GATC	5 cut(s)	425, 664, 1031, 1335, 1947
MboI	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
MboII	GAAGA	9 cut(s)	403, 914, 1115, 1499, 1577, 1590, 1804, 1955, 1959
MfeI	CAATTG	1 cut(s)	1221
MflI	RGATCY	2 cut(s)	1029, 1945
MhlI	GDGCHC	1 cut(s)	1123
MlsI	TGGCCA	1 cut(s)	606
MluCI	AATT	8 cut(s)	348, 753, 905, 1221, 1368, 1434, 1439, 1718
MluNI	TGGCCA	1 cut(s)	606
MlyI	GAGTC	2 cut(s)	650, 1164
MmeI	TCCRAC	4 cut(s)	602, 912, 1061, 1758
Mox20I	TGGCCA	1 cut(s)	606
Mph1103I	ATGCAT	2 cut(s)	330, 516
MscI	TGGCCA	1 cut(s)	606
MseI	TTAA	8 cut(s)	849, 863, 882, 894, 980, 1425, 1431, 1950
MslI	CAYNNNNRTG	1 cut(s)	1114
Msp20I	TGGCCA	1 cut(s)	606
MspA1I	CMGCKG	2 cut(s)	61, 1562
MspCI	CTTAAG	1 cut(s)	1949
MspI	CCGG	3 cut(s)	107, 341, 1611
MspR9I	CCNGG	4 cut(s)	107, 620, 1642, 1864
MunI	CAATTG	1 cut(s)	1221
Mva1269I	GAATGC	3 cut(s)	330, 1096, 1777
MvaI	CCWGG	3 cut(s)	620, 1642, 1864
MvnI	CGCG	1 cut(s)	462
MwoI	GCNNNNNNNGC	5 cut(s)	158, 485, 1239, 1328, 1807
NciI	CCSGG	1 cut(s)	107
NcoI	CCATGG	1 cut(s)	1450
NdeI	CATATG	1 cut(s)	651
NdeII	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
NlaIII	CATG	7 cut(s)	518, 783, 804, 994, 1454, 1496, 1607
NlaIV	GGNNCC	5 cut(s)	231, 843, 1031, 1515, 1868
NmuCI	GTSAC	2 cut(s)	1409, 1838
NsiI	ATGCAT	2 cut(s)	330, 516
NspI	RCATGY	3 cut(s)	783, 804, 1607
NspV	TTCGAA	1 cut(s)	253
PaeI	GCATGC	1 cut(s)	804
PciSI	GCTCTTC	2 cut(s)	1128, 1817
PctI	GAATGC	3 cut(s)	330, 1096, 1777
PfeI	GAWTC	7 cut(s)	89, 394, 940, 994, 1200, 1502, 1781
PflMI	CCANNNNNTGG	1 cut(s)	290
PfoI	TCCNGGA	1 cut(s)	1862
PinAI	ACCGGT	2 cut(s)	340, 1610
PkrI	GCNGC	6 cut(s)	60, 154, 478, 730, 799, 1561
PleI	GAGTC	2 cut(s)	649, 1163
PmaCI	CACGTG	1 cut(s)	1112
PmlI	CACGTG	1 cut(s)	1112
PpsI	GAGTC	2 cut(s)	649, 1163
Ppu21I	YACGTR	2 cut(s)	586, 1112
PpuMI	RGGWCCY	1 cut(s)	247
Psp5II	RGGWCCY	1 cut(s)	247
Psp6I	CCWGG	3 cut(s)	618, 1640, 1862
PspCI	CACGTG	1 cut(s)	1112
PspFI	CCCAGC	2 cut(s)	488, 1033
PspGI	CCWGG	3 cut(s)	618, 1640, 1862
PspN4I	GGNNCC	5 cut(s)	231, 843, 1031, 1515, 1868
PspPI	GGNCC	6 cut(s)	247, 281, 575, 1217, 1388, 1513
PspPPI	RGGWCCY	1 cut(s)	247
PsuI	RGATCY	2 cut(s)	1029, 1945
PvuII	CAGCTG	1 cut(s)	1562
RsaI	GTAC	3 cut(s)	440, 523, 764
RsaNI	GTAC	3 cut(s)	439, 522, 763
RseI	CAYNNNNRTG	1 cut(s)	1114
SapI	GCTCTTC	2 cut(s)	1128, 1817
SaqAI	TTAA	8 cut(s)	849, 863, 882, 894, 980, 1425, 1431, 1950
SatI	GCNGC	6 cut(s)	59, 153, 477, 729, 798, 1560
Sau3AI	GATC	5 cut(s)	423, 662, 1029, 1333, 1945
Sau96I	GGNCC	6 cut(s)	247, 281, 575, 1217, 1388, 1513
SchI	GAGTC	2 cut(s)	650, 1164
ScrFI	CCNGG	4 cut(s)	107, 620, 1642, 1864
SduI	GDGCHC	1 cut(s)	1123
SfcI	CTRYAG	3 cut(s)	1002, 1194, 1871
SfuI	TTCGAA	1 cut(s)	253
SinI	GGWCC	5 cut(s)	247, 575, 1217, 1388, 1513
SmiMI	CAYNNNNRTG	1 cut(s)	1114
SmlI	CTYRAG	2 cut(s)	1707, 1949
SmoI	CTYRAG	2 cut(s)	1707, 1949
SphI	GCATGC	1 cut(s)	804
Sse9I	AATT	8 cut(s)	348, 753, 905, 1221, 1368, 1434, 1439, 1718
SsiI	CCGC	5 cut(s)	47, 61, 836, 984, 1801
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	5 cut(s)	1026, 1044, 1095, 1476, 1646
StyD4I	CCNGG	4 cut(s)	105, 618, 1640, 1862
StyI	CCWWGG	3 cut(s)	1396, 1450, 1686
TaaI	ACNGT	6 cut(s)	38, 190, 290, 521, 735, 1676
TaiI	ACGT	3 cut(s)	100, 588, 1114
TaqI	TCGA	4 cut(s)	92, 185, 253, 1825
TasI	AATT	8 cut(s)	348, 753, 905, 1221, 1368, 1434, 1439, 1718
TatI	WGTACW	2 cut(s)	521, 762
TfiI	GAWTC	7 cut(s)	89, 394, 940, 994, 1200, 1502, 1781
Tru1I	TTAA	8 cut(s)	849, 863, 882, 894, 980, 1425, 1431, 1950
Tru9I	TTAA	8 cut(s)	849, 863, 882, 894, 980, 1425, 1431, 1950
TscAI	CASTG	4 cut(s)	1092, 1234, 1345, 1531
TseFI	GTSAC	2 cut(s)	1409, 1838
TseI	GCWGC	6 cut(s)	58, 152, 476, 728, 797, 1559
Tsp45I	GTSAC	2 cut(s)	1409, 1838
TspDTI	ATGAA	5 cut(s)	880, 986, 1227, 1539, 1926
TspRI	CASTG	4 cut(s)	1092, 1234, 1345, 1531
Van91I	CCANNNNNTGG	1 cut(s)	290
Vha464I	CTTAAG	1 cut(s)	1949
VpaK11BI	GGWCC	5 cut(s)	247, 575, 1217, 1388, 1513
XagI	CCTNNNNNAGG	1 cut(s)	1395
XapI	RAATTY	3 cut(s)	905, 1434, 1718
XceI	RCATGY	3 cut(s)	783, 804, 1607
XmiI	GTMKAC	1 cut(s)	1621
XspI	CTAG	5 cut(s)	1026, 1044, 1095, 1476, 1646
Zsp2I	ATGCAT	2 cut(s)	330, 516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.