Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0019620

Physical Location & Seq

Genomic Coordinates Forward (+)

57031145 .. 57033513

Gene Structure 2369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG346000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGTTCGCAGCGTCCACCAGCATCTATACCCCCACCACCATCGCTCTCCTCCCTCCCTCCTCCGCTGATCGCAAATTAGCTTCTTTATGCACCGCCACCACCACCACCAACAACAACGCGCGCACGCGCCGCCGTCCAATCAGCAAATGCCGCGTGTCCTCCTCCTCCTCCACCTCCTCGTCCCTTTCTCTAAACCCTAAACCCTCCTCTTCCAACCACCTCCTCAAAAGCCTCGCCAAAACATTCGCCGGCGCCACCGCCGTCACCCTCATCCTAAACCTAACCAACTTCCCCGCCTTCATCGGCGGAGGCGGAGGAGGAGGTCATGGTTCCAATGGCGGCGGCGGAGGCGGAGGCGGCGGCGGAGGAGGAGGAGGGTTTTGGAGGAGGCTGTTTCGCCTGCATGCGGCGAAAGCCGACGAGCAGAACGAGTCGTGGGACTCTCACGGCTTGCCGGGCGACATTGTGGTCCAGCTCAGCAGGCTCAGCGGCTTGAAGAAGTACAAGGTCTCGGAGGTCTTGTTCTTCGACCGGAGGCGGTGGAGCACCGTCGGCGCGGACGACACCATCTCCGCCATGGTGTCCCTCAGGCCCGGCGGCGTCTACACCAAGGCCGAGCTCCAGAACGAGCTCCAATCCCTGGCGAATTGCGGAATGTTCGAGAAGGTCGACTTCGAAGGCAAGACCAAGCCGGACGGCACCCTCGCCGTCACCGTCTCGTTCACGGAGAGCACGTGGCAGGGGGCGGAGAGGTTCCGGTGCATTAACGTGGGCCTGATGGCGCAGCCCAAGCCCATTGAGATGGACCCGGACATGACCGAGAGGGAAGCTCCAGTATTTGAGGAACCAGGAGAGGGATTACAAGAGGAGGATGGAGAGGGCCAGGCCGTGTTTGCTGCCGGCTCCGGTGCAGAGGGAGGTGTTGCAGATGGTGAGAGAACATGGGAAGAGGGGAAGACTCAGAGTCTTGTGGTCAAGAGAGAATTGCCCAAACAGCTTCGACCAGGTAATGCATTTAACATAGAAGCAGGGAAACAAGCTCTGAGGAACTTAACCTCCCTGGGATTGTTTTCAAACATTGAAGTGAATCCAGTACCAGATGAGAAGAATGAAGGAGGGATAGTTGTTGAAATAAATCTTAAAGAACAAGAGCACAAGACTGCTGAAGTAAGCACGGAATGGAACATTGTTCGTGGACATGGAGGCTATCCCACTTTGGCTTCACTGCTACCCGGTGGAACTGTTACATTTCAACATCGGAATATCAACGGATTGAATAGGTCCCTTATTGGTTCAGTAAGCAGTAGCAACCTCTACAACCTGCAGGTTCAGGATGATCTTGAGTTTAATCTTGAGTACGTGCATCCATATCTGGATGGTGTGGACAATCCCCGTGATCGCACTCTCCGGGTAAGCTGCTTTAACGGTCGAAAATTGAGTCCAGTCTTCACTGGTGGGCCAGGGGATGATGAAGTTCCCCCTGTATGGGTTGATCGCGCTGGCATGAAGGCTAATATAACAGAGAATTTGAGCCGTCAGAGCAAATTCACTTATGGTCTTGTGATGGAAGAGATAACCACACGTGATGAACAAAATCATATATGTTCAAATGGCCAAAGAGTGCTGCCCAGTGGAGGTGTCAGTGAAGATGGACCTCCAACAACTCTCAGCGGTAAGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

560

Amino Acids

59.92

Weight (kDa)

5.85

Isoelectric Point (pI)

50.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA1_3_Toc75	PF25282	153 - 243	1.1e-30	Toc75-like, POTRA domain
POTRA2_Toc75	PF25280	252 - 277	2.7e-06	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	331 - 382	2.1e-17	Toc75-like, POTRA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0019620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35880
pyrus_communis	pycom05g16550
rosa_multiflora	Rmu_co7982186.1_g000001
rosa_samantha	Rh5AG346000 Rh5BG356700 Rh7BG339400 Rh7CG367200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	467
Acc36I	ACCTGC	2 cut(s)	1315, 1329
AccB1I	GGYRCC	2 cut(s)	251, 698
AccB7I	CCANNNNNTGG	1 cut(s)	640
AccI	GTMKAC	2 cut(s)	603, 669
AccII	CGCG	6 cut(s)	119, 121, 127, 153, 557, 1497
AcoI	YGGCCR	1 cut(s)	1612
AcsI	RAATTY	2 cut(s)	1525, 1544
AcuI	CTGAAG	1 cut(s)	1185
AcvI	CACGTG	2 cut(s)	735, 1583
AcyI	GRCGYC	2 cut(s)	252, 600
AfaI	GTAC	3 cut(s)	503, 1095, 1358
AfiI	CCNNNNNNNGG	6 cut(s)	406, 640, 854, 1485, 1486, 1634
AflIII	ACRYGT	1 cut(s)	1580
AgsI	TTSAA	7 cut(s)	496, 1074, 1082, 1130, 1253, 1276, 1608
AhdI	GACNNNNNGTC	1 cut(s)	963
AjnI	CCWGG	6 cut(s)	639, 847, 882, 1003, 1059, 1459
AloI	GAACNNNNNNTCC	4 cut(s)	506, 538, 1040, 1072
AluBI	AGCT	8 cut(s)	80, 475, 619, 631, 830, 997, 1040, 1416
AluI	AGCT	8 cut(s)	80, 475, 619, 631, 830, 997, 1040, 1416
Alw21I	GWGCWC	5 cut(s)	548, 621, 633, 734, 1155
Alw26I	GTCTC	2 cut(s)	514, 721
AoxI	GGCC	7 cut(s)	590, 612, 772, 880, 885, 1457, 1612
ApeKI	GCWGC	5 cut(s)	8, 784, 896, 1416, 1624
ApoI	RAATTY	2 cut(s)	1525, 1544
ArsI	GACNNNNNNTTYG	2 cut(s)	1423, 1455
AspLEI	GCGC	7 cut(s)	121, 123, 129, 254, 557, 784, 1499
AspS9I	GGNCC	8 cut(s)	469, 591, 772, 805, 880, 1281, 1457, 1652
AsuC2I	CCSGG	5 cut(s)	456, 594, 809, 1233, 1409
AsuHPI	GGTGA	3 cut(s)	256, 703, 944
AsuII	TTCGAA	1 cut(s)	675
AvaII	GGWCC	4 cut(s)	469, 805, 1281, 1652
AxyI	CCTNAGG	1 cut(s)	587
BalI	TGGCCA	1 cut(s)	1614
BanI	GGYRCC	2 cut(s)	251, 698
BanII	GRGCYC	2 cut(s)	621, 633
BbrPI	CACGTG	2 cut(s)	735, 1583
BbsI	GAAGAC	2 cut(s)	962, 1438
Bbv12I	GWGCWC	5 cut(s)	548, 621, 633, 734, 1155
BbvI	GCAGC	5 cut(s)	20, 796, 883, 1403, 1611
BccI	CCATC	9 cut(s)	47, 575, 772, 796, 866, 923, 1370, 1558, 1643
BceAI	ACGGC	7 cut(s)	117, 245, 463, 692, 712, 872, 1518
BciT130I	CCWGG	6 cut(s)	641, 849, 884, 1005, 1061, 1461
BcnI	CCSGG	5 cut(s)	456, 594, 809, 1233, 1409
BcoDI	GTCTC	2 cut(s)	514, 721
BfmI	CTRYAG	1 cut(s)	1322
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	2 cut(s)	1315, 1329
BlpI	GCTNAGC	2 cut(s)	476, 485
Bme18I	GGWCC	4 cut(s)	469, 805, 1281, 1652
BmeRI	GACNNNNNGTC	1 cut(s)	963
BmgT120I	GGNCC	8 cut(s)	469, 591, 772, 805, 880, 1281, 1457, 1652
BmiI	GGNNCC	8 cut(s)	253, 331, 700, 755, 807, 846, 904, 1283
BmrI	ACTGGG	1 cut(s)	1623
BmsI	GCATC	2 cut(s)	30, 1372
BmuI	ACTGGG	1 cut(s)	1623
BpiI	GAAGAC	2 cut(s)	962, 1438
BplI	GAGNNNNNCTC	2 cut(s)	814, 846
BpmI	CTGGAG	2 cut(s)	605, 816
Bpu1102I	GCTNAGC	2 cut(s)	476, 485
Bpu14I	TTCGAA	1 cut(s)	675
BpuEI	CTTGAG	2 cut(s)	1361, 1373
BpuMI	CCSGG	5 cut(s)	456, 594, 809, 1233, 1409
BsaAI	YACGTR	3 cut(s)	735, 1360, 1583
BsaHI	GRCGYC	2 cut(s)	252, 600
BsaI	GGTCTC	1 cut(s)	514
BsaJI	CCNNGG	6 cut(s)	576, 609, 639, 1059, 1060, 1460
BsaWI	WCCGGW	3 cut(s)	531, 756, 905
Bsc4I	CCNNNNNNNGG	6 cut(s)	406, 640, 854, 1485, 1486, 1634
Bse118I	RCCGGY	2 cut(s)	248, 899
Bse1I	ACTGG	5 cut(s)	833, 1091, 1442, 1456, 1629
Bse21I	CCTNAGG	1 cut(s)	587
BseBI	CCWGG	6 cut(s)	641, 849, 884, 1005, 1061, 1461
BseDI	CCNNGG	6 cut(s)	576, 609, 639, 1059, 1060, 1460
BseGI	GGATG	6 cut(s)	270, 877, 1339, 1363, 1381, 1471
BseLI	CCNNNNNNNGG	6 cut(s)	406, 640, 854, 1485, 1486, 1634
BseMII	CTCAG	6 cut(s)	490, 499, 601, 974, 1034, 1681
BseNI	ACTGG	5 cut(s)	833, 1091, 1442, 1456, 1629
BsePI	GCGCGC	1 cut(s)	119
BseXI	GCAGC	5 cut(s)	20, 796, 883, 1403, 1611
BsgI	GTGCAG	1 cut(s)	930
Bsh1236I	CGCG	6 cut(s)	119, 121, 127, 153, 557, 1497
Bsh1285I	CGRYCG	2 cut(s)	532, 1429
BshFI	GGCC	7 cut(s)	592, 614, 774, 882, 887, 1459, 1614
BshNI	GGYRCC	2 cut(s)	251, 698
BsiEI	CGRYCG	2 cut(s)	532, 1429
BsiHKAI	GWGCWC	5 cut(s)	548, 621, 633, 734, 1155
BslFI	GGGAC	4 cut(s)	166, 452, 568, 1267
BslI	CCNNNNNNNGG	6 cut(s)	406, 640, 854, 1485, 1486, 1634
BsmAI	GTCTC	2 cut(s)	514, 721
BsmBI	CGTCTC	1 cut(s)	721
BsmFI	GGGAC	4 cut(s)	166, 452, 568, 1267
BsnI	GGCC	7 cut(s)	592, 614, 774, 882, 887, 1459, 1614
Bso31I	GGTCTC	1 cut(s)	514
Bsp119I	TTCGAA	1 cut(s)	675
Bsp1286I	GDGCHC	5 cut(s)	548, 621, 633, 734, 1155
Bsp143I	GATC	4 cut(s)	67, 1336, 1396, 1492
Bsp1720I	GCTNAGC	2 cut(s)	476, 485
Bsp19I	CCATGG	1 cut(s)	576
BspANI	GGCC	7 cut(s)	592, 614, 774, 882, 887, 1459, 1614
BspCNI	CTCAG	6 cut(s)	489, 498, 600, 973, 1035, 1680
BspFNI	CGCG	6 cut(s)	119, 121, 127, 153, 557, 1497
BspLI	GGNNCC	8 cut(s)	253, 331, 700, 755, 807, 846, 904, 1283
BspMAI	CTGCAG	1 cut(s)	1326
BspMI	ACCTGC	2 cut(s)	1315, 1329
BspT104I	TTCGAA	1 cut(s)	675
BspT107I	GGYRCC	2 cut(s)	251, 698
BspTNI	GGTCTC	1 cut(s)	514
BsrFI	RCCGGY	2 cut(s)	248, 899
BsrI	ACTGG	5 cut(s)	833, 1091, 1442, 1456, 1629
BssAI	RCCGGY	2 cut(s)	248, 899
BssECI	CCNNGG	6 cut(s)	576, 609, 639, 1059, 1060, 1460
BssHII	GCGCGC	1 cut(s)	119
BssMI	GATC	4 cut(s)	67, 1336, 1396, 1492
BssNI	GRCGYC	2 cut(s)	252, 600
BssT1I	CCWWGG	2 cut(s)	576, 609
Bst2UI	CCWGG	6 cut(s)	641, 849, 884, 1005, 1061, 1461
Bst4CI	ACNGT	4 cut(s)	550, 715, 1243, 1427
Bst6I	CTCTTC	3 cut(s)	214, 942, 1563
BstACI	GRCGYC	2 cut(s)	252, 600
BstBAI	YACGTR	3 cut(s)	735, 1360, 1583
BstBI	TTCGAA	1 cut(s)	675
BstC8I	GCNNGC	9 cut(s)	121, 125, 250, 401, 405, 452, 482, 901, 1501
BstDEI	CTNAG	6 cut(s)	476, 485, 587, 960, 1043, 1667
BstDSI	CCRYGG	1 cut(s)	576
BstF5I	GGATG	6 cut(s)	270, 877, 1339, 1363, 1381, 1471
BstFNI	CGCG	6 cut(s)	119, 121, 127, 153, 557, 1497
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	7 cut(s)	121, 123, 129, 254, 557, 784, 1499
BstKTI	GATC	4 cut(s)	70, 1339, 1399, 1495
BstMAI	GTCTC	2 cut(s)	514, 721
BstMBI	GATC	4 cut(s)	67, 1336, 1396, 1492
BstMCI	CGRYCG	2 cut(s)	532, 1429
BstNI	CCWGG	6 cut(s)	641, 849, 884, 1005, 1061, 1461
BstNSI	RCATGY	1 cut(s)	407
BstSFI	CTRYAG	1 cut(s)	1322
BstUI	CGCG	6 cut(s)	119, 121, 127, 153, 557, 1497
BstV1I	GCAGC	5 cut(s)	20, 796, 883, 1403, 1611
BstV2I	GAAGAC	2 cut(s)	962, 1438
BstXI	CCANNNNNNTGG	1 cut(s)	802
Bsu36I	CCTNAGG	1 cut(s)	587
BsuRI	GGCC	7 cut(s)	592, 614, 774, 882, 887, 1459, 1614
BtgI	CCRYGG	1 cut(s)	576
BtgZI	GCGATG	1 cut(s)	25
BtsCI	GGATG	6 cut(s)	270, 877, 1339, 1363, 1381, 1471
BtsI	GCAGTG	1 cut(s)	1223
BtsIMutI	CAGTG	4 cut(s)	1223, 1449, 1636, 1648
BveI	ACCTGC	2 cut(s)	1315, 1329
Cac8I	GCNNGC	9 cut(s)	121, 125, 250, 401, 405, 452, 482, 901, 1501
CfoI	GCGC	7 cut(s)	121, 123, 129, 254, 557, 784, 1499
Cfr10I	RCCGGY	2 cut(s)	248, 899
Cfr13I	GGNCC	8 cut(s)	469, 591, 772, 805, 880, 1281, 1457, 1652
CseI	GACGC	1 cut(s)	589
CsiI	ACCWGGT	1 cut(s)	1003
Csp6I	GTAC	3 cut(s)	502, 1094, 1357
CviAII	CATG	7 cut(s)	326, 404, 577, 814, 942, 1199, 1504
CviQI	GTAC	3 cut(s)	502, 1094, 1357
DdeI	CTNAG	6 cut(s)	476, 485, 587, 960, 1043, 1667
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	4 cut(s)	69, 1338, 1398, 1494
DpnII	GATC	4 cut(s)	67, 1336, 1396, 1492
DrdI	GACNNNNNNGTC	1 cut(s)	467
DriI	GACNNNNNGTC	1 cut(s)	963
DseDI	GACNNNNNNGTC	1 cut(s)	467
EaeI	YGGCCR	1 cut(s)	1612
Eam1104I	CTCTTC	3 cut(s)	214, 942, 1563
Eam1105I	GACNNNNNGTC	1 cut(s)	963
EarI	CTCTTC	3 cut(s)	214, 942, 1563
EciI	GGCGGA	7 cut(s)	321, 327, 360, 366, 378, 562, 761
Ecl136II	GAGCTC	2 cut(s)	619, 631
Eco130I	CCWWGG	2 cut(s)	576, 609
Eco24I	GRGCYC	2 cut(s)	621, 633
Eco31I	GGTCTC	1 cut(s)	514
Eco47I	GGWCC	4 cut(s)	469, 805, 1281, 1652
Eco53kI	GAGCTC	2 cut(s)	619, 631
Eco57I	CTGAAG	1 cut(s)	1185
Eco72I	CACGTG	2 cut(s)	735, 1583
Eco81I	CCTNAGG	1 cut(s)	587
EcoICRI	GAGCTC	2 cut(s)	619, 631
EcoO109I	RGGNCCY	1 cut(s)	1281
EcoRII	CCWGG	6 cut(s)	639, 847, 882, 1003, 1059, 1459
EcoT14I	CCWWGG	2 cut(s)	576, 609
EcoT22I	ATGCAT	1 cut(s)	1015
EcoT38I	GRGCYC	2 cut(s)	621, 633
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	2 cut(s)	576, 609
Esp3I	CGTCTC	1 cut(s)	721
FaeI	CATG	7 cut(s)	329, 407, 580, 817, 945, 1202, 1507
FalI	AAGNNNNNCTT	2 cut(s)	656, 688
FaqI	GGGAC	4 cut(s)	166, 452, 568, 1267
FatI	CATG	7 cut(s)	325, 403, 576, 813, 941, 1198, 1503
FauI	CCCGC	1 cut(s)	301
FblI	GTMKAC	2 cut(s)	603, 669
FokI	GGATG	6 cut(s)	257, 884, 1346, 1350, 1388, 1478
FriOI	GRGCYC	2 cut(s)	621, 633
GlaI	GCGC	7 cut(s)	120, 122, 128, 253, 556, 783, 1498
GsuI	CTGGAG	2 cut(s)	605, 816
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	7 cut(s)	592, 614, 774, 882, 887, 1459, 1614
HgaI	GACGC	1 cut(s)	589
HhaI	GCGC	7 cut(s)	121, 123, 129, 254, 557, 784, 1499
Hin1I	GRCGYC	2 cut(s)	252, 600
Hin1II	CATG	7 cut(s)	329, 407, 580, 817, 945, 1202, 1507
Hin6I	GCGC	7 cut(s)	119, 121, 127, 252, 555, 782, 1497
HinP1I	GCGC	7 cut(s)	119, 121, 127, 252, 555, 782, 1497
HincII	GTYRAC	1 cut(s)	670
HindII	GTYRAC	1 cut(s)	670
HinfI	GANTC	6 cut(s)	431, 440, 958, 964, 1087, 1438
HphI	GGTGA	3 cut(s)	256, 703, 944
Hpy166II	GTNNAC	6 cut(s)	15, 604, 670, 723, 1196, 1384
Hpy188I	TCNGA	5 cut(s)	514, 963, 1044, 1260, 1539
Hpy188III	TCNNGA	7 cut(s)	622, 661, 976, 1331, 1340, 1352, 1373
Hpy8I	GTNNAC	6 cut(s)	15, 604, 670, 723, 1196, 1384
Hpy99I	CGWCG	2 cut(s)	422, 554
HpyAV	CCTTC	5 cut(s)	307, 658, 671, 1106, 1501
HpyCH4III	ACNGT	4 cut(s)	550, 715, 1243, 1427
HpyCH4IV	ACGT	4 cut(s)	734, 768, 1359, 1582
HpyCH4V	TGCA	8 cut(s)	90, 403, 762, 911, 926, 1013, 1324, 1363
HpyF3I	CTNAG	6 cut(s)	476, 485, 587, 960, 1043, 1667
HpySE526I	ACGT	4 cut(s)	734, 768, 1359, 1582
Hsp92I	GRCGYC	2 cut(s)	252, 600
Hsp92II	CATG	7 cut(s)	329, 407, 580, 817, 945, 1202, 1507
HspAI	GCGC	7 cut(s)	119, 121, 127, 252, 555, 782, 1497
KasI	GGCGCC	1 cut(s)	251
KroI	GCCGGC	2 cut(s)	248, 899
KroNI	GCCGGC	2 cut(s)	250, 901
Kzo9I	GATC	4 cut(s)	67, 1336, 1396, 1492
LmnI	GCTCC	5 cut(s)	543, 624, 636, 835, 908
Lsp1109I	GCAGC	5 cut(s)	20, 796, 883, 1403, 1611
LweI	GCATC	2 cut(s)	30, 1372
MabI	ACCWGGT	1 cut(s)	1003
MaeII	ACGT	4 cut(s)	734, 768, 1359, 1582
MaeIII	GTNAC	3 cut(s)	262, 709, 1243
MalI	GATC	4 cut(s)	69, 1338, 1398, 1494
MboI	GATC	4 cut(s)	67, 1336, 1396, 1492
MboII	GAAGA	9 cut(s)	201, 508, 517, 959, 967, 1117, 1438, 1580, 1658
MhlI	GDGCHC	5 cut(s)	548, 621, 633, 734, 1155
MlsI	TGGCCA	1 cut(s)	1614
MluCI	AATT	6 cut(s)	74, 646, 983, 1433, 1525, 1544
MluNI	TGGCCA	1 cut(s)	1614
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	5 cut(s)	434, 440, 952, 973, 1447
MmeI	TCCRAC	2 cut(s)	237, 1682
Mox20I	TGGCCA	1 cut(s)	1614
Mph1103I	ATGCAT	1 cut(s)	1015
MreI	CGCCGGCG	1 cut(s)	248
MroNI	GCCGGC	2 cut(s)	248, 899
MscI	TGGCCA	1 cut(s)	1614
MseI	TTAA	6 cut(s)	765, 1017, 1052, 1140, 1347, 1422
MslI	CAYNNNNRTG	3 cut(s)	767, 800, 1082
Msp20I	TGGCCA	1 cut(s)	1614
MspA1I	CMGCKG	3 cut(s)	65, 489, 1671
MvaI	CCWGG	6 cut(s)	641, 849, 884, 1005, 1061, 1461
MvnI	CGCG	6 cut(s)	119, 121, 127, 153, 557, 1497
NaeI	GCCGGC	2 cut(s)	250, 901
NarI	GGCGCC	1 cut(s)	252
NciI	CCSGG	5 cut(s)	456, 594, 809, 1233, 1409
NcoI	CCATGG	1 cut(s)	576
NdeII	GATC	4 cut(s)	67, 1336, 1396, 1492
NgoMIV	GCCGGC	2 cut(s)	248, 899
NlaIII	CATG	7 cut(s)	329, 407, 580, 817, 945, 1202, 1507
NlaIV	GGNNCC	8 cut(s)	253, 331, 700, 755, 807, 846, 904, 1283
NmeAIII	GCCGAG	1 cut(s)	640
NmuCI	GTSAC	2 cut(s)	262, 709
NsiI	ATGCAT	1 cut(s)	1015
NspI	RCATGY	1 cut(s)	407
NspV	TTCGAA	1 cut(s)	675
PaeI	GCATGC	1 cut(s)	407
PasI	CCCWGGG	1 cut(s)	1060
PauI	GCGCGC	1 cut(s)	119
PcsI	WCGNNNNNNNCGW	5 cut(s)	426, 558, 666, 711, 731
PdiI	GCCGGC	2 cut(s)	250, 901
PfeI	GAWTC	1 cut(s)	1087
PflMI	CCANNNNNTGG	1 cut(s)	640
PleI	GAGTC	5 cut(s)	434, 439, 952, 972, 1446
PluTI	GGCGCC	1 cut(s)	255
PmaCI	CACGTG	2 cut(s)	735, 1583
PmlI	CACGTG	2 cut(s)	735, 1583
PpsI	GAGTC	5 cut(s)	434, 439, 952, 972, 1446
Ppu21I	YACGTR	3 cut(s)	735, 1360, 1583
PpuMI	RGGWCCY	1 cut(s)	1281
Psp124BI	GAGCTC	2 cut(s)	621, 633
Psp5II	RGGWCCY	1 cut(s)	1281
Psp6I	CCWGG	6 cut(s)	639, 847, 882, 1003, 1059, 1459
PspCI	CACGTG	2 cut(s)	735, 1583
PspGI	CCWGG	6 cut(s)	639, 847, 882, 1003, 1059, 1459
PspN4I	GGNNCC	8 cut(s)	253, 331, 700, 755, 807, 846, 904, 1283
PspPI	GGNCC	8 cut(s)	469, 591, 772, 805, 880, 1281, 1457, 1652
PspPPI	RGGWCCY	1 cut(s)	1281
PstI	CTGCAG	1 cut(s)	1326
PteI	GCGCGC	1 cut(s)	119
RsaI	GTAC	3 cut(s)	503, 1095, 1358
RsaNI	GTAC	3 cut(s)	502, 1094, 1357
RseI	CAYNNNNRTG	3 cut(s)	767, 800, 1082
SacI	GAGCTC	2 cut(s)	621, 633
SalI	GTCGAC	1 cut(s)	668
SaqAI	TTAA	6 cut(s)	765, 1017, 1052, 1140, 1347, 1422
Sau3AI	GATC	4 cut(s)	67, 1336, 1396, 1492
Sau96I	GGNCC	8 cut(s)	469, 591, 772, 805, 880, 1281, 1457, 1652
SbfI	CCTGCAGG	1 cut(s)	1326
SchI	GAGTC	5 cut(s)	434, 440, 952, 973, 1447
SdaI	CCTGCAGG	1 cut(s)	1326
SduI	GDGCHC	5 cut(s)	548, 621, 633, 734, 1155
SexAI	ACCWGGT	1 cut(s)	1003
SfaNI	GCATC	2 cut(s)	30, 1372
SfcI	CTRYAG	1 cut(s)	1322
SfoI	GGCGCC	1 cut(s)	253
SfuI	TTCGAA	1 cut(s)	675
SgrAI	CRCCGGYG	1 cut(s)	248
SinI	GGWCC	4 cut(s)	469, 805, 1281, 1652
SmiMI	CAYNNNNRTG	3 cut(s)	767, 800, 1082
SmlI	CTYRAG	2 cut(s)	1340, 1352
SmoI	CTYRAG	2 cut(s)	1340, 1352
SphI	GCATGC	1 cut(s)	407
Sse8387I	CCTGCAGG	1 cut(s)	1326
Sse9I	AATT	6 cut(s)	74, 646, 983, 1433, 1525, 1544
SspDI	GGCGCC	1 cut(s)	251
SstI	GAGCTC	2 cut(s)	621, 633
StyI	CCWWGG	2 cut(s)	576, 609
TaaI	ACNGT	4 cut(s)	550, 715, 1243, 1427
TaiI	ACGT	4 cut(s)	737, 771, 1362, 1585
TaqI	TCGA	6 cut(s)	528, 660, 669, 675, 1000, 1429
TaqII	GACCGA	1 cut(s)	833
TasI	AATT	6 cut(s)	74, 646, 983, 1433, 1525, 1544
TatI	WGTACW	1 cut(s)	501
TauI	GCSGC	9 cut(s)	132, 153, 342, 345, 360, 363, 410, 492, 600
TfiI	GAWTC	1 cut(s)	1087
Tru1I	TTAA	6 cut(s)	765, 1017, 1052, 1140, 1347, 1422
Tru9I	TTAA	6 cut(s)	765, 1017, 1052, 1140, 1347, 1422
TscAI	CASTG	4 cut(s)	1230, 1456, 1636, 1648
TseFI	GTSAC	2 cut(s)	262, 709
TseI	GCWGC	5 cut(s)	8, 784, 896, 1416, 1624
Tsp45I	GTSAC	2 cut(s)	262, 709
TspDTI	ATGAA	5 cut(s)	289, 1125, 1485, 1520, 1602
TspGWI	ACGGA	3 cut(s)	740, 1190, 1284
TspRI	CASTG	4 cut(s)	1230, 1456, 1636, 1648
Van91I	CCANNNNNTGG	1 cut(s)	640
VpaK11BI	GGWCC	4 cut(s)	469, 805, 1281, 1652
XapI	RAATTY	2 cut(s)	1525, 1544
XceI	RCATGY	1 cut(s)	407
XcmI	CCANNNNNNNNNTGG	1 cut(s)	574
XmiI	GTMKAC	2 cut(s)	603, 669
Zsp2I	ATGCAT	1 cut(s)	1015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.