Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0019620

Physical Location & Seq

Genomic Coordinates Forward (+)

55399018 .. 55404371

Gene Structure 5354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG356700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGTTCGCAGCGTCCACCAGCATCTATACCCCCACCACCATCGCCCTCCTCCCTCCCTCCTCCGCTGATCGCAAATTAGCTTCTTTATGCACCGCCACCGCCACCGCCGCCACCACCACCACCACCACCAACAACAGGCGCACGCGCCGCCGTCCAATCACCAAATGCCGCGTGTCCACCTCCTCGCCCCTTTCTCTAAACCCTAAACCCTCCTCTTCCAATAACCACCTCCTCAAAAGCCTCGCCAAAACATTCGCCGGCGCCACCGCCGTCACCCTCATCCTAAACCTAACCAACTTCCCCGCCTTCATCGGCGGAGGCGGAGGAGGAGGTCATGGTTCCAATGGAGGCGGTGGAGGCGGCGGCGGAGAAGGAGGGTTTTGGAGGAGGCTGTTTCGCCTGCATGCGGCGAAAGCCGACGAGCCGAACGAGTCGTGGGACTCTCACGGGTTGCCGGGCGACATTGTGGTCCAGCTCAGCAGGCTCAGCGGCTTCAAGAAGTACAAGGTCTCGGAGGTCTTGTTCTTCGACAAGAAGCGGTGGAGCAGCGTCGGCGCCGACGACACCATCTCCGACATGGTGTCCCTCAGGCCCGGCGGCGTCTACACCAAGGCCGAGCTCCAGAACGAGCTCCAATCCCTGGCCAATTGCGGAATGTTCGAGAAGGTCGACTTCGAAGGCAAGACCAAGCCGGACGGCACCCTCGCCGTCACCGTCTCGTTCACGGAGAGCACGTGGCAGGCGGCGGAGAGGTTCCGGTGCATTAACGTGGGCCTGATGGCGCAGCCCAAGCCCATTGAGATGGACCCGGATATGACCGAGAGGGAGAAGCTCCAGTATTTCAGGAACCAGGAGAGGGATTACAAGAGGAGGATGGAGAGGGCCAGGCCGTGTTTGCTGCCGGCTCCGGTGCAGAGGGAGGTGTTGCAGATGGTGAGAGAGCAGGGGAAGGTGAGTGCTAGGGTGTTGCAGAAGATTCAGGCCCGGATTCTCAAGTGGTACCAAGATGAGGGGTATCTGTGTGCCAATGTTGTCAACTTTGGGAATTTGAATACAAAGGAGGTTGTGTGTGAGGTGGTGGAGGGCGATATTACTCGGCTGCTTATTCAGTTCCGGGATAAGCTTGGCAATGTTGTAGAGGGGAAGACTCAGAGTCTTGTGGTCAAGAGAGAATTGCCCAAACAGCTTCGACCAGGTAATGCGTTTAACATAGAAGCAGGGAAACAAGCTCTGAGGAACTTAACCTCCCTGGGATTGTTTTCAAACATTGAAGTGAATCCAGTACCAGATGAGAAGAATGAAGGAGGGATAGTTGTTGAAATAAATCTTAAAGAACAAGAGCACAAGACTGCTGAAGTAAGCACGGAATGGAACATTGTTCGTGGACATGGAGGCTATCCCACTTTGGCTTCACTGCTACCCGGTGGAACTGTTACATTTCAACATCGGAATATCAACGGATTGAATAGGTCTCTTATTGGTTCAGTAAGCAGTAGCAACCTCTACAACCTGCAGGTTCAGGATGATCTTGAGTTTAAGCTTGAGTACATGCATCCATATCTGGATGGTGTGGACAATCTCCGTGATCGCACTCTCCGGGTAAGCTGCTTTAACGGTCGAAAATTGAGTCCAGTCTTCACTGGTGGGCCAGGGGATGATGAAGTTCCCCCTGTATGGGTTGATCGCGCTGGCATGAAGGCTAATATAACAGAGTGCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

573

Amino Acids

63.04

Weight (kDa)

9.1

Isoelectric Point (pI)

46.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA1_3_Toc75	PF25282	153 - 243	4e-30	Toc75-like, POTRA domain
POTRA2_Toc75	PF25280	252 - 363	7.1e-56	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	364 - 445	1.1e-24	Toc75-like, POTRA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0019620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35880
pyrus_communis	pycom05g16550
rosa_multiflora	Rmu_co7982186.1_g000001
rosa_samantha	Rh5AG346000 Rh5BG356700 Rh7BG339400 Rh7CG367200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	467
Acc36I	ACCTGC	2 cut(s)	1504, 1518
Acc65I	GGTACC	1 cut(s)	999
AccB1I	GGYRCC	4 cut(s)	260, 554, 698, 999
AccB7I	CCANNNNNTGG	1 cut(s)	640
AccI	GTMKAC	2 cut(s)	603, 669
AccII	CGCG	3 cut(s)	145, 171, 1686
AcoI	YGGCCR	1 cut(s)	642
AcsI	RAATTY	1 cut(s)	1045
AcuI	CTGAAG	1 cut(s)	1374
AcvI	CACGTG	1 cut(s)	735
AcyI	GRCGYC	3 cut(s)	261, 555, 600
AfaI	GTAC	4 cut(s)	503, 1001, 1284, 1547
AfiI	CCNNNNNNNGG	7 cut(s)	135, 406, 640, 856, 1009, 1674, 1675
AgsI	TTSAA	7 cut(s)	496, 1051, 1263, 1271, 1319, 1442, 1465
AhdI	GACNNNNNGTC	2 cut(s)	580, 1152
AjnI	CCWGG	6 cut(s)	639, 849, 884, 1192, 1248, 1648
AloI	GAACNNNNNNTCC	4 cut(s)	506, 538, 1229, 1261
Alw21I	GWGCWC	4 cut(s)	621, 633, 734, 1344
Alw26I	GTCTC	3 cut(s)	514, 721, 1476
AoxI	GGCC	8 cut(s)	590, 612, 642, 772, 882, 887, 981, 1646
ApeKI	GCWGC	6 cut(s)	8, 546, 784, 898, 1099, 1605
ApoI	RAATTY	1 cut(s)	1045
ArsI	GACNNNNNNTTYG	2 cut(s)	1612, 1644
Asp718I	GGTACC	1 cut(s)	999
AspLEI	GCGC	6 cut(s)	141, 147, 263, 557, 784, 1688
AspS9I	GGNCC	7 cut(s)	469, 591, 772, 805, 882, 982, 1646
AsuC2I	CCSGG	7 cut(s)	456, 594, 809, 985, 1115, 1422, 1598
AsuHPI	GGTGA	5 cut(s)	151, 265, 703, 946, 964
AsuII	TTCGAA	1 cut(s)	675
AvaII	GGWCC	2 cut(s)	469, 805
AxyI	CCTNAGG	1 cut(s)	587
BalI	TGGCCA	1 cut(s)	644
BanI	GGYRCC	4 cut(s)	260, 554, 698, 999
BanII	GRGCYC	2 cut(s)	621, 633
BbrPI	CACGTG	1 cut(s)	735
BbsI	GAAGAC	2 cut(s)	1151, 1627
Bbv12I	GWGCWC	4 cut(s)	621, 633, 734, 1344
BbvI	GCAGC	6 cut(s)	20, 558, 796, 885, 1086, 1592
BccI	CCATC	7 cut(s)	47, 575, 772, 796, 868, 925, 1559
BceAI	ACGGC	5 cut(s)	135, 254, 692, 712, 874
BciT130I	CCWGG	6 cut(s)	641, 851, 886, 1194, 1250, 1650
BcnI	CCSGG	7 cut(s)	456, 594, 809, 985, 1115, 1422, 1598
BcoDI	GTCTC	3 cut(s)	514, 721, 1476
BfaI	CTAG	1 cut(s)	960
BfmI	CTRYAG	1 cut(s)	1511
BfoI	RGCGCY	2 cut(s)	264, 558
BfuAI	ACCTGC	2 cut(s)	1504, 1518
BlpI	GCTNAGC	2 cut(s)	476, 485
Bme18I	GGWCC	2 cut(s)	469, 805
BmeRI	GACNNNNNGTC	2 cut(s)	580, 1152
BmgT120I	GGNCC	7 cut(s)	469, 591, 772, 805, 882, 982, 1646
BmiI	GGNNCC	9 cut(s)	262, 340, 556, 700, 755, 807, 848, 906, 1001
BmsI	GCATC	2 cut(s)	30, 1561
BpiI	GAAGAC	2 cut(s)	1151, 1627
BpmI	CTGGAG	2 cut(s)	605, 818
Bpu1102I	GCTNAGC	2 cut(s)	476, 485
Bpu14I	TTCGAA	1 cut(s)	675
BpuEI	CTTGAG	3 cut(s)	977, 1550, 1562
BpuMI	CCSGG	7 cut(s)	456, 594, 809, 985, 1115, 1422, 1598
BsaAI	YACGTR	1 cut(s)	735
BsaHI	GRCGYC	3 cut(s)	261, 555, 600
BsaI	GGTCTC	2 cut(s)	514, 1476
BsaJI	CCNNGG	5 cut(s)	609, 639, 1248, 1249, 1649
BsaWI	WCCGGW	2 cut(s)	756, 907
Bsc4I	CCNNNNNNNGG	7 cut(s)	135, 406, 640, 856, 1009, 1674, 1675
Bse118I	RCCGGY	2 cut(s)	257, 901
Bse1I	ACTGG	4 cut(s)	835, 1280, 1631, 1645
Bse21I	CCTNAGG	1 cut(s)	587
Bse3DI	GCAATG	1 cut(s)	1135
BseBI	CCWGG	6 cut(s)	641, 851, 886, 1194, 1250, 1650
BseDI	CCNNGG	5 cut(s)	609, 639, 1248, 1249, 1649
BseGI	GGATG	6 cut(s)	279, 879, 1528, 1552, 1570, 1660
BseLI	CCNNNNNNNGG	7 cut(s)	135, 406, 640, 856, 1009, 1674, 1675
BseMI	GCAATG	1 cut(s)	1135
BseMII	CTCAG	5 cut(s)	490, 499, 601, 1163, 1223
BseNI	ACTGG	4 cut(s)	835, 1280, 1631, 1645
BseRI	GAGGAG	9 cut(s)	38, 49, 172, 202, 221, 339, 342, 400, 883
BseXI	GCAGC	6 cut(s)	20, 558, 796, 885, 1086, 1592
BsgI	GTGCAG	1 cut(s)	932
Bsh1236I	CGCG	3 cut(s)	145, 171, 1686
Bsh1285I	CGRYCG	1 cut(s)	1618
BshFI	GGCC	8 cut(s)	592, 614, 644, 774, 884, 889, 983, 1648
BshNI	GGYRCC	4 cut(s)	260, 554, 698, 999
BsiEI	CGRYCG	1 cut(s)	1618
BsiHKAI	GWGCWC	4 cut(s)	621, 633, 734, 1344
BslFI	GGGAC	2 cut(s)	452, 568
BslI	CCNNNNNNNGG	7 cut(s)	135, 406, 640, 856, 1009, 1674, 1675
BsmAI	GTCTC	3 cut(s)	514, 721, 1476
BsmBI	CGTCTC	1 cut(s)	721
BsmFI	GGGAC	2 cut(s)	452, 568
BsnI	GGCC	8 cut(s)	592, 614, 644, 774, 884, 889, 983, 1648
Bso31I	GGTCTC	2 cut(s)	514, 1476
Bsp119I	TTCGAA	1 cut(s)	675
Bsp1286I	GDGCHC	4 cut(s)	621, 633, 734, 1344
Bsp143I	GATC	4 cut(s)	67, 1525, 1585, 1681
Bsp1720I	GCTNAGC	2 cut(s)	476, 485
BspANI	GGCC	8 cut(s)	592, 614, 644, 774, 884, 889, 983, 1648
BspCNI	CTCAG	5 cut(s)	489, 498, 600, 1162, 1224
BspFNI	CGCG	3 cut(s)	145, 171, 1686
BspLI	GGNNCC	9 cut(s)	262, 340, 556, 700, 755, 807, 848, 906, 1001
BspMAI	CTGCAG	1 cut(s)	1515
BspMI	ACCTGC	2 cut(s)	1504, 1518
BspT104I	TTCGAA	1 cut(s)	675
BspT107I	GGYRCC	4 cut(s)	260, 554, 698, 999
BspTNI	GGTCTC	2 cut(s)	514, 1476
BsrDI	GCAATG	1 cut(s)	1135
BsrFI	RCCGGY	2 cut(s)	257, 901
BsrI	ACTGG	4 cut(s)	835, 1280, 1631, 1645
BssAI	RCCGGY	2 cut(s)	257, 901
BssECI	CCNNGG	5 cut(s)	609, 639, 1248, 1249, 1649
BssMI	GATC	4 cut(s)	67, 1525, 1585, 1681
BssNI	GRCGYC	3 cut(s)	261, 555, 600
BssT1I	CCWWGG	1 cut(s)	609
Bst2UI	CCWGG	6 cut(s)	641, 851, 886, 1194, 1250, 1650
Bst4CI	ACNGT	3 cut(s)	715, 1432, 1616
Bst6I	CTCTTC	1 cut(s)	220
BstACI	GRCGYC	3 cut(s)	261, 555, 600
BstBAI	YACGTR	1 cut(s)	735
BstBI	TTCGAA	1 cut(s)	675
BstC8I	GCNNGC	8 cut(s)	143, 259, 401, 405, 482, 741, 903, 1690
BstDEI	CTNAG	5 cut(s)	476, 485, 587, 1149, 1232
BstF5I	GGATG	6 cut(s)	279, 879, 1528, 1552, 1570, 1660
BstFNI	CGCG	3 cut(s)	145, 171, 1686
BstH2I	RGCGCY	2 cut(s)	264, 558
BstHHI	GCGC	6 cut(s)	141, 147, 263, 557, 784, 1688
BstKTI	GATC	4 cut(s)	70, 1528, 1588, 1684
BstMAI	GTCTC	3 cut(s)	514, 721, 1476
BstMBI	GATC	4 cut(s)	67, 1525, 1585, 1681
BstMCI	CGRYCG	1 cut(s)	1618
BstNI	CCWGG	6 cut(s)	641, 851, 886, 1194, 1250, 1650
BstNSI	RCATGY	2 cut(s)	407, 1552
BstSFI	CTRYAG	1 cut(s)	1511
BstUI	CGCG	3 cut(s)	145, 171, 1686
BstV1I	GCAGC	6 cut(s)	20, 558, 796, 885, 1086, 1592
BstV2I	GAAGAC	2 cut(s)	1151, 1627
BstXI	CCANNNNNNTGG	1 cut(s)	802
Bsu36I	CCTNAGG	1 cut(s)	587
BsuRI	GGCC	8 cut(s)	592, 614, 644, 774, 884, 889, 983, 1648
BtgZI	GCGATG	1 cut(s)	25
BtsCI	GGATG	6 cut(s)	279, 879, 1528, 1552, 1570, 1660
BtsI	GCAGTG	1 cut(s)	1412
BtsIMutI	CAGTG	2 cut(s)	1412, 1638
BveI	ACCTGC	2 cut(s)	1504, 1518
Cac8I	GCNNGC	8 cut(s)	143, 259, 401, 405, 482, 741, 903, 1690
CfoI	GCGC	6 cut(s)	141, 147, 263, 557, 784, 1688
Cfr10I	RCCGGY	2 cut(s)	257, 901
Cfr13I	GGNCC	7 cut(s)	469, 591, 772, 805, 882, 982, 1646
CseI	GACGC	2 cut(s)	538, 589
CsiI	ACCWGGT	1 cut(s)	1192
Csp6I	GTAC	4 cut(s)	502, 1000, 1283, 1546
CviAII	CATG	6 cut(s)	335, 404, 577, 1388, 1549, 1693
CviQI	GTAC	4 cut(s)	502, 1000, 1283, 1546
DdeI	CTNAG	5 cut(s)	476, 485, 587, 1149, 1232
DinI	GGCGCC	2 cut(s)	262, 556
DpnI	GATC	4 cut(s)	69, 1527, 1587, 1683
DpnII	GATC	4 cut(s)	67, 1525, 1585, 1681
DrdI	GACNNNNNNGTC	1 cut(s)	467
DriI	GACNNNNNGTC	2 cut(s)	580, 1152
DseDI	GACNNNNNNGTC	1 cut(s)	467
EaeI	YGGCCR	1 cut(s)	642
Eam1104I	CTCTTC	1 cut(s)	220
Eam1105I	GACNNNNNGTC	2 cut(s)	580, 1152
EarI	CTCTTC	1 cut(s)	220
EciI	GGCGGA	4 cut(s)	330, 336, 381, 761
Ecl136II	GAGCTC	2 cut(s)	619, 631
Eco130I	CCWWGG	1 cut(s)	609
Eco24I	GRGCYC	2 cut(s)	621, 633
Eco31I	GGTCTC	2 cut(s)	514, 1476
Eco47I	GGWCC	2 cut(s)	469, 805
Eco53kI	GAGCTC	2 cut(s)	619, 631
Eco57I	CTGAAG	1 cut(s)	1374
Eco72I	CACGTG	1 cut(s)	735
Eco81I	CCTNAGG	1 cut(s)	587
EcoICRI	GAGCTC	2 cut(s)	619, 631
EcoRII	CCWGG	6 cut(s)	639, 849, 884, 1192, 1248, 1648
EcoT14I	CCWWGG	1 cut(s)	609
EcoT22I	ATGCAT	1 cut(s)	1554
EcoT38I	GRGCYC	2 cut(s)	621, 633
EgeI	GGCGCC	2 cut(s)	262, 556
EheI	GGCGCC	2 cut(s)	262, 556
ErhI	CCWWGG	1 cut(s)	609
Esp3I	CGTCTC	1 cut(s)	721
FaeI	CATG	6 cut(s)	338, 407, 580, 1391, 1552, 1696
FalI	AAGNNNNNCTT	2 cut(s)	656, 688
FaqI	GGGAC	2 cut(s)	452, 568
FatI	CATG	6 cut(s)	334, 403, 576, 1387, 1548, 1692
FauI	CCCGC	1 cut(s)	310
FauNDI	CATATG	1 cut(s)	1718
FblI	GTMKAC	2 cut(s)	603, 669
FokI	GGATG	6 cut(s)	266, 886, 1535, 1539, 1577, 1667
FriOI	GRGCYC	2 cut(s)	621, 633
FspBI	CTAG	1 cut(s)	960
GlaI	GCGC	6 cut(s)	140, 146, 262, 556, 783, 1687
GsuI	CTGGAG	2 cut(s)	605, 818
HaeII	RGCGCY	2 cut(s)	264, 558
HaeIII	GGCC	8 cut(s)	592, 614, 644, 774, 884, 889, 983, 1648
HgaI	GACGC	2 cut(s)	538, 589
HhaI	GCGC	6 cut(s)	141, 147, 263, 557, 784, 1688
Hin1I	GRCGYC	3 cut(s)	261, 555, 600
Hin1II	CATG	6 cut(s)	338, 407, 580, 1391, 1552, 1696
Hin6I	GCGC	6 cut(s)	139, 145, 261, 555, 782, 1686
HinP1I	GCGC	6 cut(s)	139, 145, 261, 555, 782, 1686
HincII	GTYRAC	2 cut(s)	670, 1036
HindII	GTYRAC	2 cut(s)	670, 1036
HindIII	AAGCTT	2 cut(s)	1121, 1538
HinfI	GANTC	8 cut(s)	431, 440, 976, 988, 1147, 1153, 1276, 1627
HphI	GGTGA	5 cut(s)	151, 265, 703, 946, 964
Hpy166II	GTNNAC	8 cut(s)	15, 177, 604, 670, 723, 1036, 1385, 1573
Hpy188I	TCNGA	5 cut(s)	514, 574, 1152, 1233, 1449
Hpy188III	TCNNGA	8 cut(s)	496, 622, 661, 844, 1165, 1520, 1529, 1562
Hpy8I	GTNNAC	8 cut(s)	15, 177, 604, 670, 723, 1036, 1385, 1573
Hpy99I	CGWCG	3 cut(s)	422, 554, 563
HpyAV	CCTTC	7 cut(s)	316, 365, 658, 671, 943, 1295, 1690
HpyCH4III	ACNGT	3 cut(s)	715, 1432, 1616
HpyCH4IV	ACGT	2 cut(s)	734, 768
HpyCH4V	TGCA	9 cut(s)	90, 403, 762, 913, 928, 970, 1513, 1552, 1716
HpyF3I	CTNAG	5 cut(s)	476, 485, 587, 1149, 1232
HpySE526I	ACGT	2 cut(s)	734, 768
Hsp92I	GRCGYC	3 cut(s)	261, 555, 600
Hsp92II	CATG	6 cut(s)	338, 407, 580, 1391, 1552, 1696
HspAI	GCGC	6 cut(s)	139, 145, 261, 555, 782, 1686
KasI	GGCGCC	2 cut(s)	260, 554
KpnI	GGTACC	1 cut(s)	1003
KroI	GCCGGC	2 cut(s)	257, 901
KroNI	GCCGGC	2 cut(s)	259, 903
Kzo9I	GATC	4 cut(s)	67, 1525, 1585, 1681
LmnI	GCTCC	5 cut(s)	543, 624, 636, 837, 910
Lsp1109I	GCAGC	6 cut(s)	20, 558, 796, 885, 1086, 1592
LweI	GCATC	2 cut(s)	30, 1561
MabI	ACCWGGT	1 cut(s)	1192
MaeI	CTAG	1 cut(s)	960
MaeII	ACGT	2 cut(s)	734, 768
MaeIII	GTNAC	3 cut(s)	271, 709, 1432
MalI	GATC	4 cut(s)	69, 1527, 1587, 1683
MboI	GATC	4 cut(s)	67, 1525, 1585, 1681
MboII	GAAGA	6 cut(s)	207, 517, 985, 1156, 1306, 1627
MfeI	CAATTG	1 cut(s)	646
MhlI	GDGCHC	4 cut(s)	621, 633, 734, 1344
MlsI	TGGCCA	1 cut(s)	644
MluCI	AATT	5 cut(s)	74, 646, 1045, 1172, 1622
MluNI	TGGCCA	1 cut(s)	644
Mly113I	GGCGCC	2 cut(s)	261, 555
MlyI	GAGTC	5 cut(s)	434, 440, 1141, 1162, 1636
MmeI	TCCRAC	1 cut(s)	597
Mox20I	TGGCCA	1 cut(s)	644
Mph1103I	ATGCAT	1 cut(s)	1554
MreI	CGCCGGCG	1 cut(s)	257
MroNI	GCCGGC	2 cut(s)	257, 901
MscI	TGGCCA	1 cut(s)	644
MseI	TTAA	6 cut(s)	765, 1206, 1241, 1329, 1536, 1611
MslI	CAYNNNNRTG	3 cut(s)	767, 800, 1271
Msp20I	TGGCCA	1 cut(s)	644
MspA1I	CMGCKG	2 cut(s)	65, 489
MunI	CAATTG	1 cut(s)	646
MvaI	CCWGG	6 cut(s)	641, 851, 886, 1194, 1250, 1650
MvnI	CGCG	3 cut(s)	145, 171, 1686
NaeI	GCCGGC	2 cut(s)	259, 903
NarI	GGCGCC	2 cut(s)	261, 555
NciI	CCSGG	7 cut(s)	456, 594, 809, 985, 1115, 1422, 1598
NdeI	CATATG	1 cut(s)	1718
NdeII	GATC	4 cut(s)	67, 1525, 1585, 1681
NgoMIV	GCCGGC	2 cut(s)	257, 901
NlaIII	CATG	6 cut(s)	338, 407, 580, 1391, 1552, 1696
NlaIV	GGNNCC	9 cut(s)	262, 340, 556, 700, 755, 807, 848, 906, 1001
NmeAIII	GCCGAG	2 cut(s)	640, 1075
NmuCI	GTSAC	2 cut(s)	271, 709
NsiI	ATGCAT	1 cut(s)	1554
NspI	RCATGY	2 cut(s)	407, 1552
NspV	TTCGAA	1 cut(s)	675
PaeI	GCATGC	1 cut(s)	407
PasI	CCCWGGG	1 cut(s)	1249
PcsI	WCGNNNNNNNCGW	5 cut(s)	426, 558, 666, 711, 731
PdiI	GCCGGC	2 cut(s)	259, 903
PfeI	GAWTC	3 cut(s)	976, 988, 1276
PflMI	CCANNNNNTGG	1 cut(s)	640
PfoI	TCCNGGA	1 cut(s)	1113
PleI	GAGTC	5 cut(s)	434, 439, 1141, 1161, 1635
PluTI	GGCGCC	2 cut(s)	264, 558
PmaCI	CACGTG	1 cut(s)	735
PmlI	CACGTG	1 cut(s)	735
PpsI	GAGTC	5 cut(s)	434, 439, 1141, 1161, 1635
Ppu21I	YACGTR	1 cut(s)	735
Psp124BI	GAGCTC	2 cut(s)	621, 633
Psp6I	CCWGG	6 cut(s)	639, 849, 884, 1192, 1248, 1648
PspCI	CACGTG	1 cut(s)	735
PspGI	CCWGG	6 cut(s)	639, 849, 884, 1192, 1248, 1648
PspN4I	GGNNCC	9 cut(s)	262, 340, 556, 700, 755, 807, 848, 906, 1001
PspPI	GGNCC	7 cut(s)	469, 591, 772, 805, 882, 982, 1646
PstI	CTGCAG	1 cut(s)	1515
RsaI	GTAC	4 cut(s)	503, 1001, 1284, 1547
RsaNI	GTAC	4 cut(s)	502, 1000, 1283, 1546
RseI	CAYNNNNRTG	3 cut(s)	767, 800, 1271
SacI	GAGCTC	2 cut(s)	621, 633
SalI	GTCGAC	1 cut(s)	668
SaqAI	TTAA	6 cut(s)	765, 1206, 1241, 1329, 1536, 1611
Sau3AI	GATC	4 cut(s)	67, 1525, 1585, 1681
Sau96I	GGNCC	7 cut(s)	469, 591, 772, 805, 882, 982, 1646
SbfI	CCTGCAGG	1 cut(s)	1515
SchI	GAGTC	5 cut(s)	434, 440, 1141, 1162, 1636
SdaI	CCTGCAGG	1 cut(s)	1515
SduI	GDGCHC	4 cut(s)	621, 633, 734, 1344
SexAI	ACCWGGT	1 cut(s)	1192
SfaNI	GCATC	2 cut(s)	30, 1561
SfcI	CTRYAG	1 cut(s)	1511
SfoI	GGCGCC	2 cut(s)	262, 556
SfuI	TTCGAA	1 cut(s)	675
SgrAI	CRCCGGYG	1 cut(s)	257
SinI	GGWCC	2 cut(s)	469, 805
SmiMI	CAYNNNNRTG	3 cut(s)	767, 800, 1271
SmlI	CTYRAG	3 cut(s)	992, 1529, 1541
SmoI	CTYRAG	3 cut(s)	992, 1529, 1541
SphI	GCATGC	1 cut(s)	407
Sse8387I	CCTGCAGG	1 cut(s)	1515
Sse9I	AATT	5 cut(s)	74, 646, 1045, 1172, 1622
SspDI	GGCGCC	2 cut(s)	260, 554
SspMI	CTAG	1 cut(s)	960
SstI	GAGCTC	2 cut(s)	621, 633
StyI	CCWWGG	1 cut(s)	609
TaaI	ACNGT	3 cut(s)	715, 1432, 1616
TaiI	ACGT	2 cut(s)	737, 771
TaqI	TCGA	6 cut(s)	528, 660, 669, 675, 1189, 1618
TaqII	GACCGA	1 cut(s)	833
TasI	AATT	5 cut(s)	74, 646, 1045, 1172, 1622
TatI	WGTACW	2 cut(s)	501, 1545
TauI	GCSGC	9 cut(s)	110, 150, 171, 363, 366, 410, 492, 600, 746
TfiI	GAWTC	3 cut(s)	976, 988, 1276
Tru1I	TTAA	6 cut(s)	765, 1206, 1241, 1329, 1536, 1611
Tru9I	TTAA	6 cut(s)	765, 1206, 1241, 1329, 1536, 1611
TscAI	CASTG	2 cut(s)	1419, 1645
TseFI	GTSAC	2 cut(s)	271, 709
TseI	GCWGC	6 cut(s)	8, 546, 784, 898, 1099, 1605
Tsp45I	GTSAC	2 cut(s)	271, 709
TspDTI	ATGAA	4 cut(s)	298, 1314, 1674, 1709
TspGWI	ACGGA	4 cut(s)	740, 1379, 1473, 1571
TspRI	CASTG	2 cut(s)	1419, 1645
Van91I	CCANNNNNTGG	1 cut(s)	640
VpaK11BI	GGWCC	2 cut(s)	469, 805
XapI	RAATTY	1 cut(s)	1045
XceI	RCATGY	2 cut(s)	407, 1552
XcmI	CCANNNNNNNNNTGG	1 cut(s)	574
XmiI	GTMKAC	2 cut(s)	603, 669
XspI	CTAG	1 cut(s)	960
Zsp2I	ATGCAT	1 cut(s)	1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.