Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0015991

Physical Location & Seq

Genomic Coordinates Reverse (-)

64010036 .. 64013709

Gene Structure 3674 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG376100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGAACCACACCCCCACCCCAATCCCCATTTCCATTTCAAGATTCCACCTTTTACTCCTTCTCTCACTTTTACTCTCACTCTCTTCTTCTTCTTCATCCTCATTGCTCAAAAAGCCACCCCCTCTTCCAATTCTGCCCCTCCCCTCAGCTCCCCAGCTCCAATGGCAACTCGGCCACATGGCCATGTTCCTCCACTTCGGACCCAACACCTTCACCGACTCCGAATGGGGCACCGGCCACGCTGCCCCCTCCATCTTCAACCCCAAAAACCTCAACGCCACCCAGTGGGTCAAAGTCGCCAAAGACTCTGGCTTTTCGCGCGTGATCCTCACCGCCAAACACCACGATGGCTTCTGCTTGTGGCCCACCGAGTACACCAACTACTCGGTCAGCTCCAGCCCGTGGAGGAGCGGCGGTGGTGACGTGGTGGGTGACCTCGCTGAGGCTGCTAGGGACGCCGGTATTGGATTGGGCCTTTACCTTTCGCCTTGGGATCGGCACGAGCCGTGTTATGGGAAGACTTTGGAGTACAATGAATTCTATATGGCCCAAATGACAGAGCTCCTCACAAGGTATGGAGATATCAAGGAAGTATGGTTGGATGGTGCAAAAGGGGAAGGGGAGAAGGATATGGATTATTTCTTTGATTCTTGGTTCAGTCTGATTCATCAACACCAGCCAGGCGCCATCATTTTCTCTGATGCTGGTCCCGACACCAGGTGGGTTGGCGACGAAGCTGGTGTTGCTGGGTCGACTTGTTGGTCTCTTTTCAATAGGAGTTCTGCCAAGATTGGTGACACTGATTTCGAATATTCAAGAGGAGGTGACCCACTTGGTCATGATTGGGTACCAGCTGAGTGTGACGTCTCAATTCGTCCTGGTTGGTTTTGGCATTCATCAGAAGTTCCAAAATCTGCAAGGACTCTGCTTGAACTATACTACAAATCAGTTGGTAGGAACTGTCTCTTGTTACTAAATGTACCCCCAAACTCTTCTGGTCTCATATCAGCAGAAGACATTCAAGTGCTTGAAGAATTCAGTGAGCTCCGAAGATCTATATTCTCACAGAATCTAGCTATGGATGCCATTATTCGTGCGAGCAGTACACGAGGAAGCACCAATAATTCTTGGTTCAATGCCTATAATGTCGTGGAAGAAGGTTTTCATTCCTATTGGGCACCTGATGAGAATCAGTCTAATTGGGTTTTATACTTCGATCTTCAAGAACTAGTATCATTCAACATTCTTCAAGTTGAAGAGCCAATTCACATGGGACAGCGGGTTATTGAGTTCCATCTTGAGATCTTGAATGCAGGTGGCAAGTGGAATAAAGTAACTAATGGAACCACTGTGGGATATCGGAGGCTTTTGCAATTTCCAACAGTTAAGTCTCGAAACTTGAGGTTTGTTATTGACAAGTCCCGGGCAGACCCACTGATATCCTATCTGGGTATATATATGGATCCATTTTCCATTTTAAGCAACATATCTCATACAACCACACAGACAGGCATCAATAGCAGTCAAATAATTCACCATATTGAATTCAACCATTCTCAAATTGCTGTGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004560 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006516 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009987 GO:0015928 GO:0016787 GO:0016798 GO:0019538 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha_L_fucos F5_F8_type_C

Protein Analysis

524

Amino Acids

58.78

Weight (kDa)

5.6

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Alpha_L_fucos	PF01120	84 - 347	6.6e-35	Alpha-L-fucosidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28100
fragaria_vesca	FvH4_3g30940
malus_domestica	MD00G1032500.v1.1
prunus_persica	Prupe.6G109300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0057471
rosa_laevigata	RLG00000035158
rosa_multiflora	Rmu_sc0000508.1_g000012 Rmu_sc0003730.1_g000020
rosa_roxburghii	Rroxscaffold_1G00022980
rosa_rugosa	Rorug05G0307500
rosa_samantha	Rh5AG376100 Rh5BG387000 Rh5CG410400 Rh5DG401200
rosa_wichuraiana	Rw5G035510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1304
AasI	GACNNNNNNGTC	1 cut(s)	760
AatII	GACGTC	1 cut(s)	867
Acc36I	ACCTGC	1 cut(s)	1304
Acc65I	GGTACC	1 cut(s)	847
AccB1I	GGYRCC	4 cut(s)	230, 683, 847, 1177
AccB7I	CCANNNNNTGG	2 cut(s)	285, 402
AccBSI	CCGCTC	1 cut(s)	411
AccI	GTMKAC	1 cut(s)	752
AccII	CGCG	2 cut(s)	319, 321
AciI	CCGC	4 cut(s)	333, 411, 414, 1279
AclWI	GGATC	4 cut(s)	319, 501, 1457, 1470
AcoI	YGGCCR	3 cut(s)	172, 180, 235
AcsI	RAATTY	3 cut(s)	536, 1034, 1544
AcyI	GRCGYC	3 cut(s)	456, 684, 864
AdeI	CACNNNGTG	2 cut(s)	285, 720
AfaI	GTAC	5 cut(s)	374, 530, 849, 981, 1105
AfiI	CCNNNNNNNGG	5 cut(s)	285, 402, 442, 512, 717
AhlI	ACTAGT	1 cut(s)	1228
AjiI	CACGTC	1 cut(s)	424
AjnI	CCWGG	3 cut(s)	679, 716, 877
AjuI	GAANNNNNNNTTGG	2 cut(s)	13, 45
AluBI	AGCT	8 cut(s)	149, 157, 393, 562, 737, 854, 1045, 1076
AluI	AGCT	8 cut(s)	149, 157, 393, 562, 737, 854, 1045, 1076
Alw21I	GWGCWC	2 cut(s)	564, 1047
Alw26I	GTCTC	5 cut(s)	768, 871, 968, 1004, 1395
AlwI	GGATC	4 cut(s)	319, 501, 1457, 1470
Ama87I	CYCGRG	1 cut(s)	1422
AoxI	GGCC	6 cut(s)	172, 180, 235, 362, 472, 546
ApeKI	GCWGC	2 cut(s)	242, 446
ApoI	RAATTY	3 cut(s)	536, 1034, 1544
ArsI	GACNNNNNNTTYG	2 cut(s)	788, 820
Asp700I	GAANNNNTTC	2 cut(s)	1017, 1161
Asp718I	GGTACC	1 cut(s)	847
AspLEI	GCGC	2 cut(s)	321, 686
AspS9I	GGNCC	5 cut(s)	200, 363, 472, 547, 707
AsuC2I	CCSGG	2 cut(s)	1423, 1424
AsuHPI	GGTGA	7 cut(s)	205, 322, 431, 443, 806, 836, 1526
AsuII	TTCGAA	1 cut(s)	807
AvaI	CYCGRG	1 cut(s)	1422
AvaII	GGWCC	2 cut(s)	200, 707
BaeGI	GKGCMC	2 cut(s)	233, 1180
BalI	TGGCCA	1 cut(s)	182
BamHI	GGATCC	1 cut(s)	1462
BanI	GGYRCC	4 cut(s)	230, 683, 847, 1177
BanII	GRGCYC	2 cut(s)	564, 1047
BauI	CACGAG	2 cut(s)	500, 1107
BbsI	GAAGAC	2 cut(s)	524, 1020
Bbv12I	GWGCWC	2 cut(s)	564, 1047
BbvCI	CCTCAGC	2 cut(s)	145, 441
BbvI	GCAGC	2 cut(s)	229, 433
BccI	CCATC	5 cut(s)	260, 341, 596, 695, 1302
BceAI	ACGGC	1 cut(s)	490
BciT130I	CCWGG	3 cut(s)	681, 718, 879
BcnI	CCSGG	2 cut(s)	1423, 1424
BcoDI	GTCTC	5 cut(s)	768, 871, 968, 1004, 1395
BcuI	ACTAGT	1 cut(s)	1228
BfaI	CTAG	3 cut(s)	450, 1073, 1229
BfoI	RGCGCY	1 cut(s)	687
BfuAI	ACCTGC	1 cut(s)	1304
BglII	AGATCT	2 cut(s)	1052, 1302
BisI	GCNGC	3 cut(s)	243, 412, 447
BlsI	GCNGC	3 cut(s)	244, 413, 448
Bme1390I	CCNGG	5 cut(s)	681, 718, 879, 1423, 1424
Bme18I	GGWCC	2 cut(s)	200, 707
BmeT110I	CYCGRG	1 cut(s)	1422
BmgBI	CACGTC	1 cut(s)	424
BmgT120I	GGNCC	5 cut(s)	200, 363, 472, 547, 707
BmiI	GGNNCC	8 cut(s)	202, 232, 685, 709, 849, 1179, 1345, 1464
BmrFI	CCNGG	5 cut(s)	681, 718, 879, 1423, 1424
BmrI	ACTGGG	1 cut(s)	277
BmsI	GCATC	3 cut(s)	691, 1072, 1521
BmuI	ACTGGG	1 cut(s)	277
BpiI	GAAGAC	2 cut(s)	524, 1020
BpmI	CTGGAG	1 cut(s)	379
Bpu10I	CCTNAGC	2 cut(s)	145, 441
Bpu14I	TTCGAA	1 cut(s)	807
BpuEI	CTTGAG	2 cut(s)	1319, 1420
BpuMI	CCSGG	2 cut(s)	1423, 1424
BsaBI	GATNNNNATC	1 cut(s)	1188
BsaHI	GRCGYC	3 cut(s)	456, 684, 864
BsaI	GGTCTC	2 cut(s)	768, 1004
BsaJI	CCNNGG	3 cut(s)	401, 488, 1422
BsaXI	ACNNNNNCTCC	2 cut(s)	400, 430
Bsc4I	CCNNNNNNNGG	5 cut(s)	285, 402, 442, 512, 717
Bse118I	RCCGGY	2 cut(s)	233, 458
Bse1I	ACTGG	1 cut(s)	283
Bse3DI	GCAATG	1 cut(s)	101
Bse8I	GATNNNNATC	1 cut(s)	1188
BseBI	CCWGG	3 cut(s)	681, 718, 879
BseDI	CCNNGG	3 cut(s)	401, 488, 1422
BseGI	GGATG	3 cut(s)	95, 607, 1087
BseJI	GATNNNNATC	1 cut(s)	1188
BseLI	CCNNNNNNNGG	5 cut(s)	285, 402, 442, 512, 717
BseMI	GCAATG	1 cut(s)	101
BseMII	CTCAG	3 cut(s)	159, 432, 846
BseNI	ACTGG	1 cut(s)	283
BseRI	GAGGAG	3 cut(s)	421, 554, 834
BseSI	GKGCMC	2 cut(s)	233, 1180
BseXI	GCAGC	2 cut(s)	229, 433
BseYI	CCCAGC	2 cut(s)	153, 746
Bsh1236I	CGCG	2 cut(s)	319, 321
BshFI	GGCC	6 cut(s)	174, 182, 237, 364, 474, 548
BshNI	GGYRCC	4 cut(s)	230, 683, 847, 1177
BsiHKAI	GWGCWC	2 cut(s)	564, 1047
BsiHKCI	CYCGRG	1 cut(s)	1422
BsiSI	CCGG	3 cut(s)	234, 459, 1423
BslFI	GGGAC	4 cut(s)	467, 693, 1287, 1405
BslI	CCNNNNNNNGG	5 cut(s)	285, 402, 442, 512, 717
BsmAI	GTCTC	5 cut(s)	768, 871, 968, 1004, 1395
BsmBI	CGTCTC	1 cut(s)	871
BsmFI	GGGAC	4 cut(s)	467, 693, 1287, 1405
BsmI	GAATGC	2 cut(s)	892, 1315
BsnI	GGCC	6 cut(s)	174, 182, 237, 364, 474, 548
Bso31I	GGTCTC	2 cut(s)	768, 1004
BsoBI	CYCGRG	1 cut(s)	1422
Bsp119I	TTCGAA	1 cut(s)	807
Bsp1286I	GDGCHC	4 cut(s)	233, 564, 1047, 1180
Bsp143I	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
BspACI	CCGC	4 cut(s)	333, 411, 414, 1279
BspANI	GGCC	6 cut(s)	174, 182, 237, 364, 474, 548
BspCNI	CTCAG	3 cut(s)	158, 433, 847
BspFNI	CGCG	2 cut(s)	319, 321
BspHI	TCATGA	1 cut(s)	838
BspLI	GGNNCC	8 cut(s)	202, 232, 685, 709, 849, 1179, 1345, 1464
BspMI	ACCTGC	1 cut(s)	1304
BspPI	GGATC	4 cut(s)	319, 501, 1457, 1470
BspQI	GCTCTTC	1 cut(s)	1251
BspT104I	TTCGAA	1 cut(s)	807
BspT107I	GGYRCC	4 cut(s)	230, 683, 847, 1177
BspTNI	GGTCTC	2 cut(s)	768, 1004
BsrBI	CCGCTC	1 cut(s)	411
BsrDI	GCAATG	1 cut(s)	101
BsrFI	RCCGGY	2 cut(s)	233, 458
BsrI	ACTGG	1 cut(s)	283
BssAI	RCCGGY	2 cut(s)	233, 458
BssECI	CCNNGG	3 cut(s)	401, 488, 1422
BssMI	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
BssNI	GRCGYC	3 cut(s)	456, 684, 864
BssSI	CACGAG	2 cut(s)	500, 1107
BssT1I	CCWWGG	1 cut(s)	488
Bst2BI	CACGAG	2 cut(s)	500, 1107
Bst2UI	CCWGG	3 cut(s)	681, 718, 879
Bst4CI	ACNGT	3 cut(s)	962, 1351, 1384
Bst6I	CTCTTC	4 cut(s)	88, 129, 997, 1251
BstACI	GRCGYC	3 cut(s)	456, 684, 864
BstBI	TTCGAA	1 cut(s)	807
BstC8I	GCNNGC	1 cut(s)	1099
BstDEI	CTNAG	3 cut(s)	145, 441, 855
BstDSI	CCRYGG	1 cut(s)	401
BstEII	GGTNACC	2 cut(s)	431, 824
BstENI	CCTNNNNNAGG	1 cut(s)	440
BstF5I	GGATG	3 cut(s)	95, 607, 1087
BstFNI	CGCG	2 cut(s)	319, 321
BstH2I	RGCGCY	1 cut(s)	687
BstHHI	GCGC	2 cut(s)	321, 686
BstKTI	GATC	6 cut(s)	327, 496, 1055, 1219, 1305, 1465
BstMAI	GTCTC	5 cut(s)	768, 871, 968, 1004, 1395
BstMBI	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
BstMWI	GCNNNNNNNGC	8 cut(s)	112, 163, 318, 446, 455, 743, 1082, 1518
BstNI	CCWGG	3 cut(s)	681, 718, 879
BstPI	GGTNACC	2 cut(s)	431, 824
BstSCI	CCNGG	5 cut(s)	679, 716, 877, 1421, 1422
BstSLI	GKGCMC	2 cut(s)	233, 1180
BstUI	CGCG	2 cut(s)	319, 321
BstV1I	GCAGC	2 cut(s)	229, 433
BstV2I	GAAGAC	2 cut(s)	524, 1020
BstX2I	RGATCY	3 cut(s)	1052, 1302, 1462
BstYI	RGATCY	3 cut(s)	1052, 1302, 1462
BsuRI	GGCC	6 cut(s)	174, 182, 237, 364, 474, 548
BtgI	CCRYGG	1 cut(s)	401
BtrI	CACGTC	1 cut(s)	424
BtsCI	GGATG	3 cut(s)	95, 607, 1087
BtsIMutI	CAGTG	5 cut(s)	290, 798, 1045, 1347, 1433
BveI	ACCTGC	1 cut(s)	1304
Cac8I	GCNNGC	1 cut(s)	1099
CciI	TCATGA	1 cut(s)	838
CfoI	GCGC	2 cut(s)	321, 686
Cfr10I	RCCGGY	2 cut(s)	233, 458
Cfr13I	GGNCC	5 cut(s)	200, 363, 472, 547, 707
Cfr9I	CCCGGG	1 cut(s)	1422
CseI	GACGC	1 cut(s)	464
CsiI	ACCWGGT	1 cut(s)	716
Csp6I	GTAC	5 cut(s)	373, 529, 848, 980, 1104
CviAII	CATG	4 cut(s)	178, 184, 839, 1270
CviQI	GTAC	5 cut(s)	373, 529, 848, 980, 1104
DdeI	CTNAG	3 cut(s)	145, 441, 855
DinI	GGCGCC	1 cut(s)	685
DpnI	GATC	6 cut(s)	326, 495, 1054, 1218, 1304, 1464
DpnII	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
DraIII	CACNNNGTG	2 cut(s)	285, 720
DrdI	GACNNNNNNGTC	1 cut(s)	760
DseDI	GACNNNNNNGTC	1 cut(s)	760
EaeI	YGGCCR	3 cut(s)	172, 180, 235
Eam1104I	CTCTTC	4 cut(s)	88, 129, 997, 1251
EarI	CTCTTC	4 cut(s)	88, 129, 997, 1251
Ecl136II	GAGCTC	2 cut(s)	562, 1045
Eco130I	CCWWGG	1 cut(s)	488
Eco24I	GRGCYC	2 cut(s)	564, 1047
Eco31I	GGTCTC	2 cut(s)	768, 1004
Eco32I	GATATC	3 cut(s)	583, 1358, 1440
Eco47I	GGWCC	2 cut(s)	200, 707
Eco53kI	GAGCTC	2 cut(s)	562, 1045
Eco88I	CYCGRG	1 cut(s)	1422
Eco91I	GGTNACC	2 cut(s)	431, 824
EcoICRI	GAGCTC	2 cut(s)	562, 1045
EcoNI	CCTNNNNNAGG	1 cut(s)	440
EcoO65I	GGTNACC	2 cut(s)	431, 824
EcoRI	GAATTC	3 cut(s)	536, 1034, 1544
EcoRII	CCWGG	3 cut(s)	679, 716, 877
EcoRV	GATATC	3 cut(s)	583, 1358, 1440
EcoT14I	CCWWGG	1 cut(s)	488
EcoT38I	GRGCYC	2 cut(s)	564, 1047
EgeI	GGCGCC	1 cut(s)	685
EheI	GGCGCC	1 cut(s)	685
ErhI	CCWWGG	1 cut(s)	488
Esp3I	CGTCTC	1 cut(s)	871
FaeI	CATG	4 cut(s)	181, 187, 842, 1273
FaqI	GGGAC	4 cut(s)	467, 693, 1287, 1405
FatI	CATG	4 cut(s)	177, 183, 838, 1269
FauI	CCCGC	1 cut(s)	1272
FblI	GTMKAC	1 cut(s)	752
Fnu4HI	GCNGC	3 cut(s)	243, 412, 447
FokI	GGATG	3 cut(s)	82, 614, 1094
FriOI	GRGCYC	2 cut(s)	564, 1047
Fsp4HI	GCNGC	3 cut(s)	243, 412, 447
FspBI	CTAG	3 cut(s)	450, 1073, 1229
GlaI	GCGC	2 cut(s)	320, 685
GluI	GCNGC	3 cut(s)	243, 412, 447
GsaI	CCCAGC	2 cut(s)	157, 750
GsuI	CTGGAG	1 cut(s)	379
HaeII	RGCGCY	1 cut(s)	687
HaeIII	GGCC	6 cut(s)	174, 182, 237, 364, 474, 548
HapII	CCGG	3 cut(s)	234, 459, 1423
HgaI	GACGC	1 cut(s)	464
HhaI	GCGC	2 cut(s)	321, 686
Hin1I	GRCGYC	3 cut(s)	456, 684, 864
Hin1II	CATG	4 cut(s)	181, 187, 842, 1273
Hin6I	GCGC	2 cut(s)	319, 684
HinP1I	GCGC	2 cut(s)	319, 684
HincII	GTYRAC	1 cut(s)	753
HindII	GTYRAC	1 cut(s)	753
HinfI	GANTC	8 cut(s)	42, 218, 305, 647, 664, 922, 1069, 1189
HpaII	CCGG	3 cut(s)	234, 459, 1423
HphI	GGTGA	7 cut(s)	205, 322, 431, 443, 806, 836, 1526
Hpy166II	GTNNAC	3 cut(s)	375, 753, 1106
Hpy188I	TCNGA	7 cut(s)	200, 223, 663, 700, 901, 1049, 1362
Hpy188III	TCNNGA	8 cut(s)	39, 710, 816, 839, 1223, 1298, 1306, 1392
Hpy8I	GTNNAC	3 cut(s)	375, 753, 1106
Hpy99I	CGWCG	1 cut(s)	734
HpyAV	CCTTC	5 cut(s)	68, 220, 611, 619, 1151
HpyCH4III	ACNGT	3 cut(s)	962, 1351, 1384
HpyCH4IV	ACGT	2 cut(s)	423, 864
HpyCH4V	TGCA	4 cut(s)	608, 917, 1313, 1372
HpyF10VI	GCNNNNNNNGC	8 cut(s)	112, 163, 318, 446, 455, 743, 1082, 1518
HpyF3I	CTNAG	3 cut(s)	145, 441, 855
HpySE526I	ACGT	2 cut(s)	423, 864
Hsp92I	GRCGYC	3 cut(s)	456, 684, 864
Hsp92II	CATG	4 cut(s)	181, 187, 842, 1273
HspAI	GCGC	2 cut(s)	319, 684
KasI	GGCGCC	1 cut(s)	683
KpnI	GGTACC	1 cut(s)	851
Kzo9I	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
LguI	GCTCTTC	1 cut(s)	1251
LmnI	GCTCC	6 cut(s)	154, 162, 398, 408, 567, 1050
Lsp1109I	GCAGC	2 cut(s)	229, 433
LweI	GCATC	3 cut(s)	691, 1072, 1521
MabI	ACCWGGT	1 cut(s)	716
MaeI	CTAG	3 cut(s)	450, 1073, 1229
MaeII	ACGT	2 cut(s)	423, 864
MaeIII	GTNAC	7 cut(s)	419, 431, 794, 824, 860, 969, 1333
MalI	GATC	6 cut(s)	326, 495, 1054, 1218, 1304, 1464
MbiI	CCGCTC	1 cut(s)	411
MboI	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
MflI	RGATCY	3 cut(s)	1052, 1302, 1462
MhlI	GDGCHC	4 cut(s)	233, 564, 1047, 1180
MlsI	TGGCCA	1 cut(s)	182
MluNI	TGGCCA	1 cut(s)	182
Mly113I	GGCGCC	1 cut(s)	684
MlyI	GAGTC	3 cut(s)	212, 299, 916
MmeI	TCCRAC	2 cut(s)	579, 1403
Mox20I	TGGCCA	1 cut(s)	182
MroXI	GAANNNNTTC	2 cut(s)	1017, 1161
MscI	TGGCCA	1 cut(s)	182
MseI	TTAA	2 cut(s)	1386, 1478
MslI	CAYNNNNRTG	3 cut(s)	182, 345, 1022
Msp20I	TGGCCA	1 cut(s)	182
MspA1I	CMGCKG	2 cut(s)	854, 1279
MspI	CCGG	3 cut(s)	234, 459, 1423
MspR9I	CCNGG	5 cut(s)	681, 718, 879, 1423, 1424
Mva1269I	GAATGC	2 cut(s)	892, 1315
MvaI	CCWGG	3 cut(s)	681, 718, 879
MvnI	CGCG	2 cut(s)	319, 321
MwoI	GCNNNNNNNGC	8 cut(s)	112, 163, 318, 446, 455, 743, 1082, 1518
NarI	GGCGCC	1 cut(s)	684
NciI	CCSGG	2 cut(s)	1423, 1424
NdeII	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
NlaIII	CATG	4 cut(s)	181, 187, 842, 1273
NlaIV	GGNNCC	8 cut(s)	202, 232, 685, 709, 849, 1179, 1345, 1464
NmeAIII	GCCGAG	1 cut(s)	150
NmuCI	GTSAC	5 cut(s)	419, 431, 794, 824, 860
NspV	TTCGAA	1 cut(s)	807
PagI	TCATGA	1 cut(s)	838
PaqCI	CACCTGC	1 cut(s)	1304
PciSI	GCTCTTC	1 cut(s)	1251
PctI	GAATGC	2 cut(s)	892, 1315
PdmI	GAANNNNTTC	2 cut(s)	1017, 1161
PfeI	GAWTC	5 cut(s)	42, 647, 664, 1069, 1189
PflMI	CCANNNNNTGG	2 cut(s)	285, 402
PkrI	GCNGC	3 cut(s)	244, 413, 448
PleI	GAGTC	3 cut(s)	212, 299, 916
PluTI	GGCGCC	1 cut(s)	687
PpsI	GAGTC	3 cut(s)	212, 299, 916
Psp124BI	GAGCTC	2 cut(s)	564, 1047
Psp6I	CCWGG	3 cut(s)	679, 716, 877
PspEI	GGTNACC	2 cut(s)	431, 824
PspFI	CCCAGC	2 cut(s)	153, 746
PspGI	CCWGG	3 cut(s)	679, 716, 877
PspN4I	GGNNCC	8 cut(s)	202, 232, 685, 709, 849, 1179, 1345, 1464
PspPI	GGNCC	5 cut(s)	200, 363, 472, 547, 707
PsuI	RGATCY	3 cut(s)	1052, 1302, 1462
PvuII	CAGCTG	1 cut(s)	854
RsaI	GTAC	5 cut(s)	374, 530, 849, 981, 1105
RsaNI	GTAC	5 cut(s)	373, 529, 848, 980, 1104
RseI	CAYNNNNRTG	3 cut(s)	182, 345, 1022
SacI	GAGCTC	2 cut(s)	564, 1047
SalI	GTCGAC	1 cut(s)	751
SapI	GCTCTTC	1 cut(s)	1251
SaqAI	TTAA	2 cut(s)	1386, 1478
SatI	GCNGC	3 cut(s)	243, 412, 447
Sau3AI	GATC	6 cut(s)	324, 493, 1052, 1216, 1302, 1462
Sau96I	GGNCC	5 cut(s)	200, 363, 472, 547, 707
SchI	GAGTC	3 cut(s)	212, 299, 916
ScrFI	CCNGG	5 cut(s)	681, 718, 879, 1423, 1424
SduI	GDGCHC	4 cut(s)	233, 564, 1047, 1180
SexAI	ACCWGGT	1 cut(s)	716
SfaNI	GCATC	3 cut(s)	691, 1072, 1521
SfoI	GGCGCC	1 cut(s)	685
SfuI	TTCGAA	1 cut(s)	807
SinI	GGWCC	2 cut(s)	200, 707
SmaI	CCCGGG	1 cut(s)	1424
SmiMI	CAYNNNNRTG	3 cut(s)	182, 345, 1022
SmlI	CTYRAG	2 cut(s)	1298, 1399
SmoI	CTYRAG	2 cut(s)	1298, 1399
SpeI	ACTAGT	1 cut(s)	1228
SsiI	CCGC	4 cut(s)	333, 411, 414, 1279
SspDI	GGCGCC	1 cut(s)	683
SspI	AATATT	1 cut(s)	812
SspMI	CTAG	3 cut(s)	450, 1073, 1229
SstI	GAGCTC	2 cut(s)	564, 1047
StyD4I	CCNGG	5 cut(s)	679, 716, 877, 1421, 1422
StyI	CCWWGG	1 cut(s)	488
TaaI	ACNGT	3 cut(s)	962, 1351, 1384
TaiI	ACGT	2 cut(s)	426, 867
TaqI	TCGA	4 cut(s)	752, 807, 1215, 1393
TaqII	GACCGA	1 cut(s)	376
TatI	WGTACW	3 cut(s)	372, 528, 1103
TauI	GCSGC	1 cut(s)	414
TfiI	GAWTC	5 cut(s)	42, 647, 664, 1069, 1189
Tru1I	TTAA	2 cut(s)	1386, 1478
Tru9I	TTAA	2 cut(s)	1386, 1478
TscAI	CASTG	5 cut(s)	290, 805, 1045, 1354, 1440
TseFI	GTSAC	5 cut(s)	419, 431, 794, 824, 860
TseI	GCWGC	2 cut(s)	242, 446
Tsp45I	GTSAC	5 cut(s)	419, 431, 794, 824, 860
TspDTI	ATGAA	6 cut(s)	17, 84, 549, 656, 885, 1154
TspMI	CCCGGG	1 cut(s)	1422
TspRI	CASTG	5 cut(s)	290, 805, 1045, 1354, 1440
Van91I	CCANNNNNTGG	2 cut(s)	285, 402
VpaK11BI	GGWCC	2 cut(s)	200, 707
XagI	CCTNNNNNAGG	1 cut(s)	440
XapI	RAATTY	3 cut(s)	536, 1034, 1544
XmaI	CCCGGG	1 cut(s)	1422
XmiI	GTMKAC	1 cut(s)	752
XmnI	GAANNNNTTC	2 cut(s)	1017, 1161
XspI	CTAG	3 cut(s)	450, 1073, 1229
ZraI	GACGTC	1 cut(s)	865

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.