expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G56240 AT5G56240 AT5G56240 AT5G56240 AT5G56250 AT5G56250 |
| fragaria_vesca | FvH4_3g41530 FvH4_3g41530 FvH4_3g41530 FvH4_3g41530 FvH4_3g41530 FvH4_3g41530 FvH4_3g41530 |
| malus_domestica | MD03G1043400.v1.1 MD11G1046500.v1.1 |
| prunus_persica | Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 Prupe.6G035800_v2.0.a1 |
| pyrus_communis | pycom03g03360 pycom11g03790 |
| rosa_chinensis | RchiOBHm_Chr5g0074531 |
| rosa_laevigata | RLG00000036484 |
| rosa_multiflora | Rmu_sc0001467.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00007010 |
| rosa_rugosa | Rorug05G0432400 Rorug05G0432500.1 Rorug05G0432600 Rorug05G0432600 Rorug05G0432600 |
| rosa_samantha | Rh5AG489800 Rh5BG510600 Rh5CG534400 Rh5DG523100 |
| rosa_wichuraiana | Rw5G045400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 4086, 4323 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2648 |
| Acc36I | ACCTGC | 3 cut(s) | 432, 581, 1390 |
| AccB1I | GGYRCC | 3 cut(s) | 1124, 1904, 3529 |
| AccI | GTMKAC | 2 cut(s) | 3633, 4313 |
| AciI | CCGC | 5 cut(s) | 9, 359, 1848, 3881, 4261 |
| AcoI | YGGCCR | 2 cut(s) | 2331, 3538 |
| AcuI | CTGAAG | 6 cut(s) | 468, 555, 1062, 2667, 2811, 3043 |
| AfaI | GTAC | 8 cut(s) | 289, 1161, 1271, 1834, 2111, 2311, 4169, 4234 |
| AflII | CTTAAG | 1 cut(s) | 1745 |
| AflIII | ACRYGT | 2 cut(s) | 2583, 3300 |
| AgeI | ACCGGT | 1 cut(s) | 3526 |
| AjnI | CCWGG | 8 cut(s) | 2377, 2695, 2704, 3535, 3540, 3610, 3681, 4041 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 641, 673 |
| AleI | CACNNNNGTG | 1 cut(s) | 1656 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3329, 3361 |
| Alw26I | GTCTC | 7 cut(s) | 205, 254, 389, 1375, 2034, 2185, 2420 |
| Ama87I | CYCGRG | 2 cut(s) | 640, 2264 |
| AoxI | GGCC | 8 cut(s) | 176, 524, 978, 2238, 2331, 3538, 3543, 3679 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1744, 1776 |
| AseI | ATTAAT | 2 cut(s) | 2568, 3750 |
| AsiGI | ACCGGT | 1 cut(s) | 3526 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 18, 967, 1585, 2940 |
| AspA2I | CCTAGG | 1 cut(s) | 2726 |
| AspS9I | GGNCC | 9 cut(s) | 593, 978, 1740, 2612, 2699, 3089, 3285, 3544, 3782 |
| AsuC2I | CCSGG | 4 cut(s) | 151, 641, 642, 2780 |
| AsuHPI | GGTGA | 9 cut(s) | 2099, 2393, 2826, 3174, 3226, 3357, 3516, 3872, 4119 |
| AsuII | TTCGAA | 2 cut(s) | 746, 1579 |
| AvaI | CYCGRG | 2 cut(s) | 640, 2264 |
| AvaII | GGWCC | 7 cut(s) | 593, 1740, 2612, 2699, 3089, 3285, 3782 |
| AvrII | CCTAGG | 1 cut(s) | 2726 |
| BalI | TGGCCA | 2 cut(s) | 2333, 3540 |
| BamHI | GGATCC | 2 cut(s) | 2455, 3685 |
| BanI | GGYRCC | 3 cut(s) | 1124, 1904, 3529 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2653, 2685 |
| BbsI | GAAGAC | 3 cut(s) | 902, 2397, 4292 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3192, 3226 |
| BciT130I | CCWGG | 8 cut(s) | 2379, 2697, 2706, 3537, 3542, 3612, 3683, 4043 |
| BciVI | GTATCC | 2 cut(s) | 2293, 2815 |
| BclI | TGATCA | 5 cut(s) | 54, 352, 2089, 3115, 3997 |
| BcnI | CCSGG | 4 cut(s) | 151, 641, 642, 2780 |
| BcoDI | GTCTC | 7 cut(s) | 205, 254, 389, 1375, 2034, 2185, 2420 |
| BfaI | CTAG | 8 cut(s) | 944, 1878, 2316, 2436, 2727, 3026, 3948, 4197 |
| BfmI | CTRYAG | 5 cut(s) | 588, 1824, 2868, 2982, 4256 |
| BfrI | CTTAAG | 1 cut(s) | 1745 |
| BfuAI | ACCTGC | 3 cut(s) | 432, 581, 1390 |
| BfuI | GTATCC | 2 cut(s) | 2293, 2815 |
| BglII | AGATCT | 2 cut(s) | 67, 949 |
| BlnI | CCTAGG | 1 cut(s) | 2726 |
| Bme18I | GGWCC | 7 cut(s) | 593, 1740, 2612, 2699, 3089, 3285, 3782 |
| BmeT110I | CYCGRG | 2 cut(s) | 640, 2264 |
| BmgT120I | GGNCC | 9 cut(s) | 593, 978, 1740, 2612, 2699, 3089, 3285, 3544, 3782 |
| BmrI | ACTGGG | 1 cut(s) | 2083 |
| BmuI | ACTGGG | 1 cut(s) | 2083 |
| BpiI | GAAGAC | 3 cut(s) | 902, 2397, 4292 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 677, 709, 3136, 3168 |
| BpmI | CTGGAG | 3 cut(s) | 1639, 1894, 3930 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1077, 1420 |
| Bpu14I | TTCGAA | 2 cut(s) | 746, 1579 |
| BpuEI | CTTGAG | 4 cut(s) | 149, 2016, 2778, 3101 |
| BpuMI | CCSGG | 4 cut(s) | 151, 641, 642, 2780 |
| Bsa29I | ATCGAT | 1 cut(s) | 810 |
| BsaAI | YACGTR | 1 cut(s) | 4224 |
| BsaBI | GATNNNNATC | 3 cut(s) | 351, 1488, 2524 |
| BsaWI | WCCGGW | 5 cut(s) | 617, 3334, 3376, 3526, 4129 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1637, 1667 |
| Bse118I | RCCGGY | 1 cut(s) | 3526 |
| Bse3DI | GCAATG | 2 cut(s) | 934, 3210 |
| Bse8I | GATNNNNATC | 3 cut(s) | 351, 1488, 2524 |
| BseBI | CCWGG | 8 cut(s) | 2379, 2697, 2706, 3537, 3542, 3612, 3683, 4043 |
| BseCI | ATCGAT | 1 cut(s) | 810 |
| BseGI | GGATG | 8 cut(s) | 232, 467, 1120, 1345, 1489, 2909, 3348, 3833 |
| BseJI | GATNNNNATC | 3 cut(s) | 351, 1488, 2524 |
| BseMI | GCAATG | 2 cut(s) | 934, 3210 |
| BseRI | GAGGAG | 6 cut(s) | 33, 869, 1275, 1668, 2154, 2154 |
| BseYI | CCCAGC | 3 cut(s) | 975, 2120, 2473 |
| BsgI | GTGCAG | 4 cut(s) | 673, 1122, 2985, 2985 |
| BshFI | GGCC | 8 cut(s) | 178, 526, 980, 2240, 2333, 3540, 3545, 3681 |
| BshNI | GGYRCC | 3 cut(s) | 1124, 1904, 3529 |
| BshTI | ACCGGT | 1 cut(s) | 3526 |
| BshVI | ATCGAT | 1 cut(s) | 810 |
| BsiHKCI | CYCGRG | 2 cut(s) | 640, 2264 |
| BsiSI | CCGG | 9 cut(s) | 151, 618, 641, 1082, 2779, 3335, 3377, 3527, 4130 |
| BslFI | GGGAC | 5 cut(s) | 1686, 1726, 1811, 1830, 3102 |
| BsmAI | GTCTC | 7 cut(s) | 205, 254, 389, 1375, 2034, 2185, 2420 |
| BsmBI | CGTCTC | 1 cut(s) | 2185 |
| BsmFI | GGGAC | 5 cut(s) | 1686, 1726, 1811, 1830, 3102 |
| BsmI | GAATGC | 5 cut(s) | 805, 2269, 3726, 3937, 4012 |
| BsnI | GGCC | 8 cut(s) | 178, 526, 980, 2240, 2333, 3540, 3545, 3681 |
| BsoBI | CYCGRG | 2 cut(s) | 640, 2264 |
| Bsp119I | TTCGAA | 2 cut(s) | 746, 1579 |
| Bsp1407I | TGTACA | 3 cut(s) | 287, 2109, 4167 |
| Bsp19I | CCATGG | 3 cut(s) | 2235, 3228, 3837 |
| BspACI | CCGC | 5 cut(s) | 9, 359, 1848, 3881, 4261 |
| BspANI | GGCC | 8 cut(s) | 178, 526, 980, 2240, 2333, 3540, 3545, 3681 |
| BspDI | ATCGAT | 1 cut(s) | 810 |
| BspHI | TCATGA | 3 cut(s) | 349, 1333, 1789 |
| BspMAI | CTGCAG | 3 cut(s) | 592, 1828, 4260 |
| BspMI | ACCTGC | 3 cut(s) | 432, 581, 1390 |
| BspT104I | TTCGAA | 2 cut(s) | 746, 1579 |
| BspT107I | GGYRCC | 3 cut(s) | 1124, 1904, 3529 |
| BspTI | CTTAAG | 1 cut(s) | 1745 |
| BsrDI | GCAATG | 2 cut(s) | 934, 3210 |
| BsrFI | RCCGGY | 1 cut(s) | 3526 |
| BsrGI | TGTACA | 3 cut(s) | 287, 2109, 4167 |
| BssAI | RCCGGY | 1 cut(s) | 3526 |
| BssT1I | CCWWGG | 8 cut(s) | 558, 890, 1311, 2235, 2726, 2913, 3228, 3837 |
| Bst2UI | CCWGG | 8 cut(s) | 2379, 2697, 2706, 3537, 3542, 3612, 3683, 4043 |
| Bst6I | CTCTTC | 4 cut(s) | 498, 1038, 2131, 3725 |
| BstAFI | CTTAAG | 1 cut(s) | 1745 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3941 |
| BstAUI | TGTACA | 3 cut(s) | 287, 2109, 4167 |
| BstBAI | YACGTR | 1 cut(s) | 4224 |
| BstBI | TTCGAA | 2 cut(s) | 746, 1579 |
| BstC8I | GCNNGC | 7 cut(s) | 415, 1038, 1441, 1624, 3774, 3898, 4203 |
| BstDSI | CCRYGG | 4 cut(s) | 1433, 2235, 3228, 3837 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1215, 2694, 4293 |
| BstF5I | GGATG | 8 cut(s) | 232, 467, 1120, 1345, 1489, 2909, 3348, 3833 |
| BstMAI | GTCTC | 7 cut(s) | 205, 254, 389, 1375, 2034, 2185, 2420 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1449, 1776, 1847, 2975, 3769, 3941 |
| BstNI | CCWGG | 8 cut(s) | 2379, 2697, 2706, 3537, 3542, 3612, 3683, 4043 |
| BstNSI | RCATGY | 5 cut(s) | 344, 1443, 2587, 3304, 3557 |
| BstSFI | CTRYAG | 5 cut(s) | 588, 1824, 2868, 2982, 4256 |
| BstV2I | GAAGAC | 3 cut(s) | 902, 2397, 4292 |
| BstX2I | RGATCY | 7 cut(s) | 28, 67, 160, 949, 2455, 2519, 3685 |
| BstYI | RGATCY | 7 cut(s) | 28, 67, 160, 949, 2455, 2519, 3685 |
| Bsu15I | ATCGAT | 1 cut(s) | 810 |
| BsuI | GTATCC | 2 cut(s) | 2293, 2815 |
| BsuRI | GGCC | 8 cut(s) | 178, 526, 980, 2240, 2333, 3540, 3545, 3681 |
| BsuTUI | ATCGAT | 1 cut(s) | 810 |
| BtgI | CCRYGG | 4 cut(s) | 1433, 2235, 3228, 3837 |
| BtsCI | GGATG | 8 cut(s) | 232, 467, 1120, 1345, 1489, 2909, 3348, 3833 |
| BtsI | GCAGTG | 2 cut(s) | 1821, 2073 |
| BveI | ACCTGC | 3 cut(s) | 432, 581, 1390 |
| Cac8I | GCNNGC | 7 cut(s) | 415, 1038, 1441, 1624, 3774, 3898, 4203 |
| CciI | TCATGA | 3 cut(s) | 349, 1333, 1789 |
| Cfr10I | RCCGGY | 1 cut(s) | 3526 |
| Cfr13I | GGNCC | 9 cut(s) | 593, 978, 1740, 2612, 2699, 3089, 3285, 3544, 3782 |
| Cfr9I | CCCGGG | 1 cut(s) | 640 |
| ClaI | ATCGAT | 1 cut(s) | 810 |
| CseI | GACGC | 1 cut(s) | 4065 |
| Csp6I | GTAC | 8 cut(s) | 288, 1160, 1270, 1833, 2110, 2310, 4168, 4233 |
| CspAI | ACCGGT | 1 cut(s) | 3526 |
| CviQI | GTAC | 8 cut(s) | 288, 1160, 1270, 1833, 2110, 2310, 4168, 4233 |
| DraI | TTTAAA | 1 cut(s) | 3739 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2648 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2648 |
| EaeI | YGGCCR | 2 cut(s) | 2331, 3538 |
| Eam1104I | CTCTTC | 4 cut(s) | 498, 1038, 2131, 3725 |
| EarI | CTCTTC | 4 cut(s) | 498, 1038, 2131, 3725 |
| Eco130I | CCWWGG | 8 cut(s) | 558, 890, 1311, 2235, 2726, 2913, 3228, 3837 |
| Eco32I | GATATC | 2 cut(s) | 706, 3075 |
| Eco47I | GGWCC | 7 cut(s) | 593, 1740, 2612, 2699, 3089, 3285, 3782 |
| Eco57I | CTGAAG | 6 cut(s) | 468, 555, 1062, 2667, 2811, 3043 |
| Eco88I | CYCGRG | 2 cut(s) | 640, 2264 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1215, 2694, 4293 |
| EcoO109I | RGGNCCY | 4 cut(s) | 593, 1740, 3089, 3782 |
| EcoRI | GAATTC | 1 cut(s) | 1021 |
| EcoRII | CCWGG | 8 cut(s) | 2377, 2695, 2704, 3535, 3540, 3610, 3681, 4041 |
| EcoRV | GATATC | 2 cut(s) | 706, 3075 |
| EcoT14I | CCWWGG | 8 cut(s) | 558, 890, 1311, 2235, 2726, 2913, 3228, 3837 |
| ErhI | CCWWGG | 8 cut(s) | 558, 890, 1311, 2235, 2726, 2913, 3228, 3837 |
| Esp3I | CGTCTC | 1 cut(s) | 2185 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2787, 2819, 3025, 3057 |
| FaqI | GGGAC | 5 cut(s) | 1686, 1726, 1811, 1830, 3102 |
| FauI | CCCGC | 1 cut(s) | 1855 |
| FauNDI | CATATG | 2 cut(s) | 2210, 4305 |
| FbaI | TGATCA | 5 cut(s) | 54, 352, 2089, 3115, 3997 |
| FblI | GTMKAC | 2 cut(s) | 3633, 4313 |
| FokI | GGATG | 8 cut(s) | 239, 454, 1127, 1352, 1496, 2896, 3335, 3820 |
| FspBI | CTAG | 8 cut(s) | 944, 1878, 2316, 2436, 2727, 3026, 3948, 4197 |
| GsaI | CCCAGC | 3 cut(s) | 979, 2124, 2477 |
| GsuI | CTGGAG | 3 cut(s) | 1639, 1894, 3930 |
| HaeIII | GGCC | 8 cut(s) | 178, 526, 980, 2240, 2333, 3540, 3545, 3681 |
| HapII | CCGG | 9 cut(s) | 151, 618, 641, 1082, 2779, 3335, 3377, 3527, 4130 |
| HgaI | GACGC | 1 cut(s) | 4065 |
| HincII | GTYRAC | 3 cut(s) | 834, 3067, 3505 |
| HindII | GTYRAC | 3 cut(s) | 834, 3067, 3505 |
| HindIII | AAGCTT | 3 cut(s) | 411, 3790, 4177 |
| HpaI | GTTAAC | 2 cut(s) | 3067, 3505 |
| HpaII | CCGG | 9 cut(s) | 151, 618, 641, 1082, 2779, 3335, 3377, 3527, 4130 |
| HphI | GGTGA | 9 cut(s) | 2099, 2393, 2826, 3174, 3226, 3357, 3516, 3872, 4119 |
| Hpy166II | GTNNAC | 9 cut(s) | 834, 846, 2071, 2900, 3067, 3505, 3634, 4015, 4314 |
| Hpy8I | GTNNAC | 9 cut(s) | 834, 846, 2071, 2900, 3067, 3505, 3634, 4015, 4314 |
| Hpy99I | CGWCG | 2 cut(s) | 3201, 4081 |
| HpyCH4IV | ACGT | 3 cut(s) | 63, 2469, 4223 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1449, 1776, 1847, 2975, 3769, 3941 |
| HpySE526I | ACGT | 3 cut(s) | 63, 2469, 4223 |
| Ksp22I | TGATCA | 5 cut(s) | 54, 352, 2089, 3115, 3997 |
| KspAI | GTTAAC | 2 cut(s) | 3067, 3505 |
| LmnI | GCTCC | 5 cut(s) | 153, 1288, 1448, 2210, 3911 |
| MaeI | CTAG | 8 cut(s) | 944, 1878, 2316, 2436, 2727, 3026, 3948, 4197 |
| MaeII | ACGT | 3 cut(s) | 63, 2469, 4223 |
| MfeI | CAATTG | 2 cut(s) | 1388, 2113 |
| MflI | RGATCY | 7 cut(s) | 28, 67, 160, 949, 2455, 2519, 3685 |
| MlsI | TGGCCA | 2 cut(s) | 2333, 3540 |
| MluNI | TGGCCA | 2 cut(s) | 2333, 3540 |
| MlyI | GAGTC | 9 cut(s) | 248, 256, 362, 515, 839, 866, 1640, 2636, 4273 |
| MmeI | TCCRAC | 5 cut(s) | 399, 1441, 2576, 3312, 3611 |
| Mox20I | TGGCCA | 2 cut(s) | 2333, 3540 |
| MroXI | GAANNNNTTC | 4 cut(s) | 18, 967, 1585, 2940 |
| MscI | TGGCCA | 2 cut(s) | 2333, 3540 |
| MslI | CAYNNNNRTG | 6 cut(s) | 354, 1338, 1656, 3816, 3930, 4005 |
| Msp20I | TGGCCA | 2 cut(s) | 2333, 3540 |
| MspA1I | CMGCKG | 5 cut(s) | 11, 1850, 2018, 3883, 4261 |
| MspCI | CTTAAG | 1 cut(s) | 1745 |
| MspI | CCGG | 9 cut(s) | 151, 618, 641, 1082, 2779, 3335, 3377, 3527, 4130 |
| MunI | CAATTG | 2 cut(s) | 1388, 2113 |
| Mva1269I | GAATGC | 5 cut(s) | 805, 2269, 3726, 3937, 4012 |
| MvaI | CCWGG | 8 cut(s) | 2379, 2697, 2706, 3537, 3542, 3612, 3683, 4043 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1449, 1776, 1847, 2975, 3769, 3941 |
| NciI | CCSGG | 4 cut(s) | 151, 641, 642, 2780 |
| NcoI | CCATGG | 3 cut(s) | 2235, 3228, 3837 |
| NdeI | CATATG | 2 cut(s) | 2210, 4305 |
| NmuCI | GTSAC | 6 cut(s) | 1643, 1658, 1667, 3363, 3422, 4125 |
| NspI | RCATGY | 5 cut(s) | 344, 1443, 2587, 3304, 3557 |
| NspV | TTCGAA | 2 cut(s) | 746, 1579 |
| OliI | CACNNNNGTG | 1 cut(s) | 1656 |
| PaeI | GCATGC | 1 cut(s) | 1443 |
| PagI | TCATGA | 3 cut(s) | 349, 1333, 1789 |
| PciI | ACATGT | 2 cut(s) | 2583, 3300 |
| PctI | GAATGC | 5 cut(s) | 805, 2269, 3726, 3937, 4012 |
| PdmI | GAANNNNTTC | 4 cut(s) | 18, 967, 1585, 2940 |
| PfoI | TCCNGGA | 1 cut(s) | 3610 |
| PinAI | ACCGGT | 1 cut(s) | 3526 |
| PleI | GAGTC | 9 cut(s) | 248, 255, 362, 514, 838, 865, 1640, 2636, 4272 |
| PpsI | GAGTC | 9 cut(s) | 248, 255, 362, 514, 838, 865, 1640, 2636, 4272 |
| Ppu21I | YACGTR | 1 cut(s) | 4224 |
| PpuMI | RGGWCCY | 4 cut(s) | 593, 1740, 3089, 3782 |
| PscI | ACATGT | 2 cut(s) | 2583, 3300 |
| PshBI | ATTAAT | 2 cut(s) | 2568, 3750 |
| PsiI | TTATAA | 2 cut(s) | 4086, 4323 |
| Psp5II | RGGWCCY | 4 cut(s) | 593, 1740, 3089, 3782 |
| Psp6I | CCWGG | 8 cut(s) | 2377, 2695, 2704, 3535, 3540, 3610, 3681, 4041 |
| PspFI | CCCAGC | 3 cut(s) | 975, 2120, 2473 |
| PspGI | CCWGG | 8 cut(s) | 2377, 2695, 2704, 3535, 3540, 3610, 3681, 4041 |
| PspPI | GGNCC | 9 cut(s) | 593, 978, 1740, 2612, 2699, 3089, 3285, 3544, 3782 |
| PspPPI | RGGWCCY | 4 cut(s) | 593, 1740, 3089, 3782 |
| PstI | CTGCAG | 3 cut(s) | 592, 1828, 4260 |
| PsuI | RGATCY | 7 cut(s) | 28, 67, 160, 949, 2455, 2519, 3685 |
| PvuII | CAGCTG | 1 cut(s) | 2018 |
| RsaI | GTAC | 8 cut(s) | 289, 1161, 1271, 1834, 2111, 2311, 4169, 4234 |
| RsaNI | GTAC | 8 cut(s) | 288, 1160, 1270, 1833, 2110, 2310, 4168, 4233 |
| RseI | CAYNNNNRTG | 6 cut(s) | 354, 1338, 1656, 3816, 3930, 4005 |
| Sau96I | GGNCC | 9 cut(s) | 593, 978, 1740, 2612, 2699, 3089, 3285, 3544, 3782 |
| SchI | GAGTC | 9 cut(s) | 248, 256, 362, 515, 839, 866, 1640, 2636, 4273 |
| SfcI | CTRYAG | 5 cut(s) | 588, 1824, 2868, 2982, 4256 |
| SfuI | TTCGAA | 2 cut(s) | 746, 1579 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3526 |
| SinI | GGWCC | 7 cut(s) | 593, 1740, 2612, 2699, 3089, 3285, 3782 |
| SmaI | CCCGGG | 1 cut(s) | 642 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 354, 1338, 1656, 3816, 3930, 4005 |
| SmlI | CTYRAG | 5 cut(s) | 164, 1745, 2031, 2793, 3080 |
| SmoI | CTYRAG | 5 cut(s) | 164, 1745, 2031, 2793, 3080 |
| SphI | GCATGC | 1 cut(s) | 1443 |
| SsiI | CCGC | 5 cut(s) | 9, 359, 1848, 3881, 4261 |
| SspI | AATATT | 1 cut(s) | 1732 |
| SspMI | CTAG | 8 cut(s) | 944, 1878, 2316, 2436, 2727, 3026, 3948, 4197 |
| StyI | CCWWGG | 8 cut(s) | 558, 890, 1311, 2235, 2726, 2913, 3228, 3837 |
| TaiI | ACGT | 3 cut(s) | 66, 2472, 4226 |
| TatI | WGTACW | 3 cut(s) | 287, 2109, 4167 |
| TseFI | GTSAC | 6 cut(s) | 1643, 1658, 1667, 3363, 3422, 4125 |
| Tsp45I | GTSAC | 6 cut(s) | 1643, 1658, 1667, 3363, 3422, 4125 |
| TspMI | CCCGGG | 1 cut(s) | 640 |
| Vha464I | CTTAAG | 1 cut(s) | 1745 |
| VpaK11BI | GGWCC | 7 cut(s) | 593, 1740, 2612, 2699, 3089, 3285, 3782 |
| VspI | ATTAAT | 2 cut(s) | 2568, 3750 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1215, 2694, 4293 |
| XceI | RCATGY | 5 cut(s) | 344, 1443, 2587, 3304, 3557 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 847 |
| XmaI | CCCGGG | 1 cut(s) | 640 |
| XmaJI | CCTAGG | 1 cut(s) | 2726 |
| XmiI | GTMKAC | 2 cut(s) | 3633, 4313 |
| XmnI | GAANNNNTTC | 4 cut(s) | 18, 967, 1585, 2940 |
| XspI | CTAG | 8 cut(s) | 944, 1878, 2316, 2436, 2727, 3026, 3948, 4197 |