Rh5BG001100

Protein BYPASS1-related

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
81215 .. 81518
304 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG001100.1

Sequence Viewer

Length: 162 bp
ATGAACAAGCCAATATTGCCCAGCAAAGGATGTCTAGGGAGCCAATACTTTACGAATGGATTGGGTCCACTGGAACGCCAAATTAGGGATGTATTCCGCAGGATTCTGAATCGCCGAACTGAGGGTCTTGAACTTTTGAGTAAGGGAAGCAATCTGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

53

Amino Acids

6.02

Weight (kDa)

10.01

Isoelectric Point (pI)

53.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020441)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 97
AfiI CCNNNNNNNGG 3 cut(s) 26, 85, 121
AgsI TTSAA 1 cut(s) 131
ArsI GACNNNNNNTTYG 2 cut(s) 109, 141
AspS9I GGNCC 1 cut(s) 65
AvaII GGWCC 1 cut(s) 65
BfaI CTAG 1 cut(s) 35
Bme18I GGWCC 1 cut(s) 65
BmgT120I GGNCC 1 cut(s) 65
BmiI GGNNCC 2 cut(s) 41, 66
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 85, 121
Bse1I ACTGG 1 cut(s) 75
BseGI GGATG 2 cut(s) 35, 94
BseLI CCNNNNNNNGG 3 cut(s) 26, 85, 121
BseMII CTCAG 1 cut(s) 111
BseNI ACTGG 1 cut(s) 75
BseYI CCCAGC 1 cut(s) 20
BslI CCNNNNNNNGG 3 cut(s) 26, 85, 121
BspACI CCGC 1 cut(s) 97
BspCNI CTCAG 1 cut(s) 112
BspLI GGNNCC 2 cut(s) 41, 66
BsrI ACTGG 1 cut(s) 75
BstDEI CTNAG 1 cut(s) 120
BstF5I GGATG 2 cut(s) 35, 94
BstMWI GCNNNNNNNGC 1 cut(s) 16
BtsCI GGATG 2 cut(s) 35, 94
BtsIMutI CAGTG 1 cut(s) 68
Cfr13I GGNCC 1 cut(s) 65
CviJI RGCY 2 cut(s) 10, 42
CviKI_1 RGCY 2 cut(s) 10, 42
DdeI CTNAG 1 cut(s) 120
Eco47I GGWCC 1 cut(s) 65
FokI GGATG 2 cut(s) 42, 101
FspBI CTAG 1 cut(s) 35
GsaI CCCAGC 1 cut(s) 24
HinfI GANTC 2 cut(s) 103, 109
Hpy166II GTNNAC 1 cut(s) 68
Hpy188I TCNGA 1 cut(s) 108
Hpy188III TCNNGA 2 cut(s) 128, 155
Hpy8I GTNNAC 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
HpyF3I CTNAG 1 cut(s) 120
LmnI GCTCC 1 cut(s) 39
LpnPI CCDG 4 cut(s) 34, 56, 85, 140
MaeI CTAG 1 cut(s) 35
MluCI AATT 1 cut(s) 81
MnlI CCTC 1 cut(s) 115
MwoI GCNNNNNNNGC 1 cut(s) 16
NlaIV GGNNCC 2 cut(s) 41, 66
PfeI GAWTC 2 cut(s) 103, 109
PspFI CCCAGC 1 cut(s) 20
PspN4I GGNNCC 2 cut(s) 41, 66
PspPI GGNCC 1 cut(s) 65
Sau96I GGNCC 1 cut(s) 65
SgeI CNNG 6 cut(s) 19, 33, 47, 83, 112, 140
SinI GGWCC 1 cut(s) 65
Sse9I AATT 1 cut(s) 81
SsiI CCGC 1 cut(s) 97
SspI AATATT 1 cut(s) 15
SspMI CTAG 1 cut(s) 35
TasI AATT 1 cut(s) 81
TfiI GAWTC 2 cut(s) 103, 109
TscAI CASTG 1 cut(s) 75
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 75
VpaK11BI GGWCC 1 cut(s) 65
XspI CTAG 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.