Rh5BG268200

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
33485708 .. 33486238
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG268200.1

Sequence Viewer

Length: 285 bp
ATGCCCCTGATGAAGAACCTCACATTTAACATAATATCCTCTCTACTTTTTGGGCTTGAACGAGGAACTCGCAGAGATGAATTTGTGGAGTGTTTCAAAAAAATGATGCAAGGATTGTGGTCAGTGCCGGTTAACTTGCCCTTCATGCGTTACAACAGCGGCCTCAAGGCAAGCAAGAGGGTTCAAAACATGCTCAAACAACTTATACGCGAAAAGAGGGTACAGCTTGAGCAAAAAAGGGTTTCTCCACAACAAGACCTCATCACTTGCTTCCTTAGCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

94

Amino Acids

11.09

Weight (kDa)

10.29

Isoelectric Point (pI)

65.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020058)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 210
AciI CCGC 1 cut(s) 159
AcsI RAATTY 1 cut(s) 80
AfaI GTAC 1 cut(s) 222
AgsI TTSAA 3 cut(s) 59, 97, 185
AluBI AGCT 1 cut(s) 226
AluI AGCT 1 cut(s) 226
AoxI GGCC 1 cut(s) 160
ApoI RAATTY 1 cut(s) 80
BisI GCNGC 1 cut(s) 160
BlsI GCNGC 1 cut(s) 161
BmsI GCATC 1 cut(s) 96
Bpu10I CCTNAGC 1 cut(s) 275
BpuEI CTTGAG 2 cut(s) 149, 248
Bse118I RCCGGY 1 cut(s) 127
Bsh1236I CGCG 1 cut(s) 210
BshFI GGCC 1 cut(s) 162
BsiSI CCGG 1 cut(s) 128
BsnI GGCC 1 cut(s) 162
BspACI CCGC 1 cut(s) 159
BspANI GGCC 1 cut(s) 162
BspFNI CGCG 1 cut(s) 210
BsrFI RCCGGY 1 cut(s) 127
BssAI RCCGGY 1 cut(s) 127
BstC8I GCNNGC 1 cut(s) 172
BstDEI CTNAG 1 cut(s) 275
BstFNI CGCG 1 cut(s) 210
BstMWI GCNNNNNNNGC 2 cut(s) 145, 276
BstNSI RCATGY 1 cut(s) 193
BstUI CGCG 1 cut(s) 210
BsuRI GGCC 1 cut(s) 162
BtsIMutI CAGTG 1 cut(s) 129
Cac8I GCNNGC 1 cut(s) 172
Cfr10I RCCGGY 1 cut(s) 127
Csp6I GTAC 1 cut(s) 221
CspCI CAANNNNNGTGG 2 cut(s) 98, 133
CviAII CATG 2 cut(s) 145, 190
CviJI RGCY 3 cut(s) 55, 162, 226
CviKI_1 RGCY 3 cut(s) 55, 162, 226
CviQI GTAC 1 cut(s) 221
DdeI CTNAG 1 cut(s) 275
FaeI CATG 2 cut(s) 148, 193
FaiI YATR 4 cut(s) 32, 146, 191, 206
FatI CATG 2 cut(s) 144, 189
Fnu4HI GCNGC 1 cut(s) 160
Fsp4HI GCNGC 1 cut(s) 160
GluI GCNGC 1 cut(s) 160
HaeIII GGCC 1 cut(s) 162
HapII CCGG 1 cut(s) 128
Hin1II CATG 2 cut(s) 148, 193
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HpaI GTTAAC 1 cut(s) 133
HpaII CCGG 1 cut(s) 128
Hpy166II GTNNAC 1 cut(s) 133
Hpy188I TCNGA 1 cut(s) 284
Hpy8I GTNNAC 1 cut(s) 133
HpyAV CCTTC 1 cut(s) 151
HpyCH4V TGCA 1 cut(s) 109
HpyF10VI GCNNNNNNNGC 2 cut(s) 145, 276
HpyF3I CTNAG 1 cut(s) 275
Hsp92II CATG 2 cut(s) 148, 193
KspAI GTTAAC 1 cut(s) 133
LpnPI CCDG 2 cut(s) 20, 141
LweI GCATC 1 cut(s) 96
MaeIII GTNAC 1 cut(s) 149
MboII GAAGA 1 cut(s) 25
MluCI AATT 1 cut(s) 80
MnlI CCTC 7 cut(s) 29, 49, 56, 171, 173, 210, 269
MseI TTAA 2 cut(s) 27, 132
MspA1I CMGCKG 1 cut(s) 159
MspI CCGG 1 cut(s) 128
MvnI CGCG 1 cut(s) 210
MwoI GCNNNNNNNGC 2 cut(s) 145, 276
NlaIII CATG 2 cut(s) 148, 193
NspI RCATGY 1 cut(s) 193
PkrI GCNGC 1 cut(s) 161
RsaI GTAC 1 cut(s) 222
RsaNI GTAC 1 cut(s) 221
SaqAI TTAA 2 cut(s) 27, 132
SatI GCNGC 1 cut(s) 160
SetI ASST 3 cut(s) 21, 228, 261
SfaNI GCATC 1 cut(s) 96
SmlI CTYRAG 2 cut(s) 164, 227
SmoI CTYRAG 2 cut(s) 164, 227
Sse9I AATT 1 cut(s) 80
SsiI CCGC 1 cut(s) 159
TasI AATT 1 cut(s) 80
TauI GCSGC 1 cut(s) 162
Tru1I TTAA 2 cut(s) 27, 132
Tru9I TTAA 2 cut(s) 27, 132
TscAI CASTG 1 cut(s) 129
TspDTI ATGAA 3 cut(s) 26, 93, 133
TspRI CASTG 1 cut(s) 129
XapI RAATTY 1 cut(s) 80
XceI RCATGY 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.