Rh5DG275900

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
33790319 .. 33790849
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG275900.1

Sequence Viewer

Length: 276 bp
ATGAAGAACCTCACATTTAACATAATATCCTCTGTACTTTTTGGGCTTGAACGAGGAACTCGCAGAGATGAATTTGTGGAGTGTTTCCAAAAAATGATGCAAGGATTGTGGTCAGTGCCGGTTAACTTGCCCTTCATGCGTTACAACAGCGGCCTCAAGGCAAGCAAGAGGGTTCAAAACATACTCAAACAACTTATAAGCGAAAAGAGGGTACAGCTTGAGCAAAAAAGGGTTTCTCCACAACAAGACTTCATCATTTGCTTCCTTAGCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

91

Amino Acids

10.7

Weight (kDa)

10.02

Isoelectric Point (pI)

72.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020058)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 197
AciI CCGC 1 cut(s) 150
AcsI RAATTY 1 cut(s) 71
AfaI GTAC 2 cut(s) 36, 213
AgsI TTSAA 2 cut(s) 50, 176
AluBI AGCT 1 cut(s) 217
AluI AGCT 1 cut(s) 217
AoxI GGCC 1 cut(s) 151
ApoI RAATTY 1 cut(s) 71
BisI GCNGC 1 cut(s) 151
BlsI GCNGC 1 cut(s) 152
BmsI GCATC 1 cut(s) 87
Bpu10I CCTNAGC 1 cut(s) 266
BpuEI CTTGAG 2 cut(s) 140, 239
Bse118I RCCGGY 1 cut(s) 118
BshFI GGCC 1 cut(s) 153
BsiSI CCGG 1 cut(s) 119
BsnI GGCC 1 cut(s) 153
BspACI CCGC 1 cut(s) 150
BspANI GGCC 1 cut(s) 153
BsrFI RCCGGY 1 cut(s) 118
BssAI RCCGGY 1 cut(s) 118
BstC8I GCNNGC 1 cut(s) 163
BstDEI CTNAG 1 cut(s) 266
BstMWI GCNNNNNNNGC 2 cut(s) 136, 267
BsuRI GGCC 1 cut(s) 153
BtsIMutI CAGTG 1 cut(s) 120
Cac8I GCNNGC 1 cut(s) 163
Cfr10I RCCGGY 1 cut(s) 118
Csp6I GTAC 2 cut(s) 35, 212
CspCI CAANNNNNGTGG 2 cut(s) 89, 124
CviAII CATG 1 cut(s) 136
CviJI RGCY 3 cut(s) 46, 153, 217
CviKI_1 RGCY 3 cut(s) 46, 153, 217
CviQI GTAC 2 cut(s) 35, 212
DdeI CTNAG 1 cut(s) 266
FaeI CATG 1 cut(s) 139
FaiI YATR 4 cut(s) 23, 137, 182, 197
FatI CATG 1 cut(s) 135
Fnu4HI GCNGC 1 cut(s) 151
Fsp4HI GCNGC 1 cut(s) 151
GluI GCNGC 1 cut(s) 151
HaeIII GGCC 1 cut(s) 153
HapII CCGG 1 cut(s) 119
Hin1II CATG 1 cut(s) 139
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HpaI GTTAAC 1 cut(s) 124
HpaII CCGG 1 cut(s) 119
Hpy166II GTNNAC 1 cut(s) 124
Hpy188I TCNGA 1 cut(s) 275
Hpy8I GTNNAC 1 cut(s) 124
HpyAV CCTTC 1 cut(s) 142
HpyCH4V TGCA 1 cut(s) 100
HpyF10VI GCNNNNNNNGC 2 cut(s) 136, 267
HpyF3I CTNAG 1 cut(s) 266
Hsp92II CATG 1 cut(s) 139
KspAI GTTAAC 1 cut(s) 124
LpnPI CCDG 1 cut(s) 132
LweI GCATC 1 cut(s) 87
MaeIII GTNAC 1 cut(s) 140
MboII GAAGA 1 cut(s) 16
MluCI AATT 1 cut(s) 71
MnlI CCTC 6 cut(s) 20, 40, 47, 162, 164, 201
MseI TTAA 2 cut(s) 18, 123
MspA1I CMGCKG 1 cut(s) 150
MspI CCGG 1 cut(s) 119
MwoI GCNNNNNNNGC 2 cut(s) 136, 267
NlaIII CATG 1 cut(s) 139
PkrI GCNGC 1 cut(s) 152
PsiI TTATAA 1 cut(s) 197
RsaI GTAC 2 cut(s) 36, 213
RsaNI GTAC 2 cut(s) 35, 212
SaqAI TTAA 2 cut(s) 18, 123
SatI GCNGC 1 cut(s) 151
SetI ASST 2 cut(s) 12, 219
SfaNI GCATC 1 cut(s) 87
SmlI CTYRAG 2 cut(s) 155, 218
SmoI CTYRAG 2 cut(s) 155, 218
Sse9I AATT 1 cut(s) 71
SsiI CCGC 1 cut(s) 150
TasI AATT 1 cut(s) 71
TatI WGTACW 1 cut(s) 34
TauI GCSGC 1 cut(s) 153
Tru1I TTAA 2 cut(s) 18, 123
Tru9I TTAA 2 cut(s) 18, 123
TscAI CASTG 1 cut(s) 120
TspDTI ATGAA 4 cut(s) 17, 84, 124, 241
TspRI CASTG 1 cut(s) 120
XapI RAATTY 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.