Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0007637

Physical Location & Seq

Genomic Coordinates Reverse (-)

43427637 .. 43432340

Gene Structure 4704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG323100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGTCGGGTTACCGCGCTCCGAACCCCCCGCCTCCCCAACCGCCCCAGCGCCAGCTCCCCTTCTCCTCCCTCAAGCCGCCCTTCTCTGCTTCACTCGACTACCACGCCTTCGCTCCCGACCGCCGCCCGCCGCCGCCCCCCGATCACCTGCCCGCCGAGGGCATTACCGTCAAGCCCTCCCTAAAGCGGAAGAGTGATACGGCATATTATGACGAGCCTAATGATAGGACAGCTGCTCCTGAGTACACTGACGTAGTTAATAGCCCACTTCAAACTCCTGTGCCAGTCAAGGTGGGAAAGGCAAACAAAGCATCTAGGCTTTCAAAGCTCAATAGAGCTGGGCCGCAGACTCCTGCTTCCAACGTGGGTTCTCCTTCTGGCGCTAATCTTACTCCTGCTGGTCCTTGTCGTTATGACAGCTCCCTAGGTCTCTTAACGAAGAAGTTTATCAATCTGATCAAACATGCGGAAGATGGTATACTAGATCTCAATAAAGCTGCTGATACTTTAGAGGTACAAAAGAGACGGATATATGACATAACAAATGTTCTCGAAGGAATTGGCCTCATAGAAAAGAAGCTGAAAAATAGAATTCAGTGGAAGGGACTTGAGGCCACAAGGACAGGAGACGCAGATGAAAACTATGATGGTTTGAAGGCACAAGTTGAAAACCTATCTACGGAGGAGGGCAGATTAGATGAGCAAATAAGAGAAATGCAGGAAAGATTGAGCAATCTCAGTGAAGAGGAAAGCAATAAGAAATGGCTTTTTGTCACTGAAGAAGACATCAAGGGCTTACCCTGCTTTCAGAATGAAACCTTAATAGCGATTAAAGCTCCCCACGGCACCACTCTTGAAGTCCCAGATCCTGATGAGGCTGTTGACTATCCCCAAAGGAGATACAGGATGGTCCTGCGAAGCATGATGGGTCCAATAGATGTTTACCTTGTCAGTCAATTTGAGGAGAAGTTCGAGGAGATTAATGGTGCCGAAGAACCTGGAAGTATCCCCTCAACTTCGGGGTTATGTGAAAACCCAGCTCCAACAATTGTCACCGAGGATACGGGGAAGCATGTTGAAATGCAGGGACAAGAAGATCATAGAGTTTCCGCTGATCCCACTGCTTCTCAGGACTTCATGAGTGGGATTATGAAGATTGTTCCCTCAGATGTAAATTGTGATGCAGATTACTGGCTTTTATCGGATGACGCTAGTGTTAGCATCACAGACATATGGAGAACAGAAACTGGAGTTGAATGGAATGAGTTTGGTGCACTTAATGAAGATTATTCCATGGGTAATGTCACACCGCGAGCACAAACTCTGCCATCGAGTGCAACGGAAGTACCTTCTACAGCCAACCCTACTAGGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0008284 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010026 GO:0010033 GO:0010090 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032989 GO:0042127 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045787 GO:0045893 GO:0045935 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051302 GO:0051445 GO:0051446 GO:0051726 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko01522 ko03018 ko04110 ko04218 ko04934 ko05161 ko05166 ko05167 ko05200 ko05206 ko05212 ko05214 ko05215 ko05218 ko05219 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map01522 map03018 map04110 map04218 map04934 map05161 map05166 map05167 map05200 map05206 map05212 map05214 map05215 map05218 map05219 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

E2F_CC-MB E2F_TDP

Protein Analysis

458

Amino Acids

50.56

Weight (kDa)

4.84

Isoelectric Point (pI)

48.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	139 - 202	2.2e-27	E2F/DP family winged-helix DNA-binding domain
E2F_CC-MB	PF16421	218 - 318	3.4e-34	E2F transcription factor CC-MB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22220 AT5G22220
fragaria_vesca	FvH4_3g25990 FvH4_3g25990 FvH4_3g25990 FvH4_3g25990 FvH4_3g25990
malus_domestica	MD03G1152700.v1.1 MD11G1172700.v1.1
prunus_persica	Prupe.6G139900_v2.0.a1 Prupe.6G139900_v2.0.a1
pyrus_communis	pycom03g10660 pycom11g14570
rosa_chinensis	RchiOBHm_Chr5g0047281
rosa_laevigata	RLG00000034486
rosa_multiflora	Rmu_sc0003154.1_g000003 Rmu_sc0003441.1_g000098
rosa_roxburghii	Rroxscaffold_1G00034080
rosa_rugosa	Rorug05G0235400
rosa_samantha	Rh5AG314400 Rh5BG323100 Rh5CG350300 Rh5DG333900
rosa_wichuraiana	Rw5G029390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	156
Acc36I	ACCTGC	1 cut(s)	156
AccB1I	GGYRCC	2 cut(s)	845, 986
AccI	GTMKAC	1 cut(s)	478
AccII	CGCG	2 cut(s)	15, 1312
AclWI	GGATC	2 cut(s)	860, 1109
AcsI	RAATTY	1 cut(s)	591
AcuI	CTGAAG	1 cut(s)	798
AfaI	GTAC	3 cut(s)	245, 516, 1347
AfiI	CCNNNNNNNGG	3 cut(s)	158, 186, 679
AgsI	TTSAA	7 cut(s)	272, 324, 655, 668, 857, 1079, 1256
AjnI	CCWGG	1 cut(s)	997
AluBI	AGCT	9 cut(s)	55, 233, 328, 338, 420, 497, 580, 836, 1040
AluI	AGCT	9 cut(s)	55, 233, 328, 338, 420, 497, 580, 836, 1040
Alw21I	GWGCWC	2 cut(s)	1276, 1318
Alw26I	GTCTC	3 cut(s)	434, 517, 621
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	2 cut(s)	860, 1109
AlwNI	CAGNNNCTG	2 cut(s)	869, 1247
AoxI	GGCC	3 cut(s)	341, 562, 612
ApaLI	GTGCAC	1 cut(s)	1272
ApeKI	GCWGC	2 cut(s)	233, 497
ApoI	RAATTY	1 cut(s)	591
AseI	ATTAAT	1 cut(s)	981
AspA2I	CCTAGG	1 cut(s)	424
AspLEI	GCGC	3 cut(s)	17, 51, 383
AspS9I	GGNCC	4 cut(s)	341, 401, 910, 929
AsuHPI	GGTGA	2 cut(s)	137, 1045
AvaII	GGWCC	3 cut(s)	401, 910, 929
AvrII	CCTAGG	1 cut(s)	424
BaeGI	GKGCMC	1 cut(s)	1276
BaeI	ACNNNNGTAYC	2 cut(s)	1329, 1362
BanI	GGYRCC	2 cut(s)	845, 986
BarI	GAAGNNNNNNTAC	2 cut(s)	462, 494
BbsI	GAAGAC	1 cut(s)	789
Bbv12I	GWGCWC	2 cut(s)	1276, 1318
BbvI	GCAGC	2 cut(s)	220, 484
BccI	CCATC	5 cut(s)	467, 641, 901, 919, 1336
BceAI	ACGGC	2 cut(s)	216, 859
BciT130I	CCWGG	1 cut(s)	999
BciVI	GTATCC	2 cut(s)	1016, 1054
BclI	TGATCA	1 cut(s)	456
BcoDI	GTCTC	3 cut(s)	434, 517, 621
BfaI	CTAG	5 cut(s)	315, 425, 482, 1212, 1368
BfmI	CTRYAG	1 cut(s)	1353
BfoI	RGCGCY	2 cut(s)	52, 384
BfuAI	ACCTGC	1 cut(s)	156
BfuI	GTATCC	2 cut(s)	1016, 1054
BglII	AGATCT	1 cut(s)	484
BisI	GCNGC	7 cut(s)	77, 124, 131, 134, 234, 344, 498
BlnI	CCTAGG	1 cut(s)	424
BlsI	GCNGC	7 cut(s)	78, 125, 132, 135, 235, 345, 499
Bme1390I	CCNGG	1 cut(s)	999
Bme18I	GGWCC	3 cut(s)	401, 910, 929
BmgT120I	GGNCC	4 cut(s)	341, 401, 910, 929
BmiI	GGNNCC	3 cut(s)	847, 930, 988
BmrFI	CCNGG	1 cut(s)	999
BmsI	GCATC	3 cut(s)	320, 1171, 1230
BpiI	GAAGAC	1 cut(s)	789
BpmI	CTGGAG	1 cut(s)	1269
BpuEI	CTTGAG	2 cut(s)	56, 629
BsaI	GGTCTC	1 cut(s)	434
BsaJI	CCNNGG	5 cut(s)	156, 424, 841, 1056, 1293
BsaXI	ACNNNNNCTCC	2 cut(s)	220, 250
Bsc4I	CCNNNNNNNGG	3 cut(s)	158, 186, 679
Bse1I	ACTGG	3 cut(s)	284, 1196, 1252
BseBI	CCWGG	1 cut(s)	999
BseDI	CCNNGG	5 cut(s)	156, 424, 841, 1056, 1293
BseGI	GGATG	2 cut(s)	912, 1210
BseLI	CCNNNNNNNGG	3 cut(s)	158, 186, 679
BseMII	CTCAG	4 cut(s)	231, 751, 1142, 1179
BseNI	ACTGG	3 cut(s)	284, 1196, 1252
BseRI	GAGGAG	4 cut(s)	55, 698, 977, 989
BseSI	GKGCMC	1 cut(s)	1276
BseXI	GCAGC	2 cut(s)	220, 484
BseYI	CCCAGC	3 cut(s)	45, 338, 1036
Bsh1236I	CGCG	2 cut(s)	15, 1312
Bsh1285I	CGRYCG	1 cut(s)	121
BshFI	GGCC	3 cut(s)	343, 564, 614
BshNI	GGYRCC	2 cut(s)	845, 986
BsiEI	CGRYCG	1 cut(s)	121
BsiHKAI	GWGCWC	2 cut(s)	1276, 1318
BslFI	GGGAC	3 cut(s)	618, 845, 1101
BslI	CCNNNNNNNGG	3 cut(s)	158, 186, 679
BsmAI	GTCTC	3 cut(s)	434, 517, 621
BsmBI	CGTCTC	2 cut(s)	517, 621
BsmFI	GGGAC	3 cut(s)	618, 845, 1101
BsnI	GGCC	3 cut(s)	343, 564, 614
Bso31I	GGTCTC	1 cut(s)	434
Bsp1286I	GDGCHC	2 cut(s)	1276, 1318
Bsp143I	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
Bsp19I	CCATGG	1 cut(s)	1293
BspANI	GGCC	3 cut(s)	343, 564, 614
BspCNI	CTCAG	4 cut(s)	232, 750, 1141, 1178
BspFNI	CGCG	2 cut(s)	15, 1312
BspHI	TCATGA	1 cut(s)	1137
BspLI	GGNNCC	3 cut(s)	847, 930, 988
BspMI	ACCTGC	1 cut(s)	156
BspPI	GGATC	2 cut(s)	860, 1109
BspT107I	GGYRCC	2 cut(s)	845, 986
BspTNI	GGTCTC	1 cut(s)	434
BsrI	ACTGG	3 cut(s)	284, 1196, 1252
BssECI	CCNNGG	5 cut(s)	156, 424, 841, 1056, 1293
BssMI	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
BssNAI	GTATAC	1 cut(s)	479
BssT1I	CCWWGG	2 cut(s)	424, 1293
Bst1107I	GTATAC	1 cut(s)	479
Bst2UI	CCWGG	1 cut(s)	999
Bst4CI	ACNGT	1 cut(s)	169
Bst6I	CTCTTC	2 cut(s)	185, 738
BstC8I	GCNNGC	4 cut(s)	53, 128, 153, 1314
BstDEI	CTNAG	4 cut(s)	240, 737, 1128, 1165
BstDSI	CCRYGG	2 cut(s)	841, 1293
BstEII	GGTNACC	1 cut(s)	8
BstF5I	GGATG	2 cut(s)	912, 1210
BstFNI	CGCG	2 cut(s)	15, 1312
BstH2I	RGCGCY	2 cut(s)	52, 384
BstHHI	GCGC	3 cut(s)	17, 51, 383
BstKTI	GATC	6 cut(s)	145, 459, 487, 868, 1099, 1117
BstMAI	GTCTC	3 cut(s)	434, 517, 621
BstMBI	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
BstMCI	CGRYCG	1 cut(s)	121
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 325, 801, 833
BstNI	CCWGG	1 cut(s)	999
BstNSI	RCATGY	2 cut(s)	467, 1076
BstPI	GGTNACC	1 cut(s)	8
BstSCI	CCNGG	1 cut(s)	997
BstSFI	CTRYAG	1 cut(s)	1353
BstSLI	GKGCMC	1 cut(s)	1276
BstUI	CGCG	2 cut(s)	15, 1312
BstV1I	GCAGC	2 cut(s)	220, 484
BstV2I	GAAGAC	1 cut(s)	789
BstX2I	RGATCY	2 cut(s)	484, 865
BstYI	RGATCY	2 cut(s)	484, 865
BstZ17I	GTATAC	1 cut(s)	479
BsuI	GTATCC	2 cut(s)	1016, 1054
BsuRI	GGCC	3 cut(s)	343, 564, 614
BtgI	CCRYGG	2 cut(s)	841, 1293
BtsCI	GGATG	2 cut(s)	912, 1210
BtsI	GCAGTG	1 cut(s)	1119
BtsIMutI	CAGTG	5 cut(s)	246, 602, 745, 774, 1119
BveI	ACCTGC	1 cut(s)	156
Cac8I	GCNNGC	4 cut(s)	53, 128, 153, 1314
CaiI	CAGNNNCTG	2 cut(s)	869, 1247
CciI	TCATGA	1 cut(s)	1137
CfoI	GCGC	3 cut(s)	17, 51, 383
Cfr13I	GGNCC	4 cut(s)	341, 401, 910, 929
CseI	GACGC	2 cut(s)	638, 1217
Csp6I	GTAC	3 cut(s)	244, 515, 1346
CviAII	CATG	5 cut(s)	464, 922, 1073, 1138, 1294
CviQI	GTAC	3 cut(s)	244, 515, 1346
DdeI	CTNAG	4 cut(s)	240, 737, 1128, 1165
DpnI	GATC	6 cut(s)	144, 458, 486, 867, 1098, 1116
DpnII	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
Eam1104I	CTCTTC	2 cut(s)	185, 738
EarI	CTCTTC	2 cut(s)	185, 738
Eco130I	CCWWGG	2 cut(s)	424, 1293
Eco31I	GGTCTC	1 cut(s)	434
Eco47I	GGWCC	3 cut(s)	401, 910, 929
Eco57I	CTGAAG	1 cut(s)	798
Eco91I	GGTNACC	1 cut(s)	8
EcoO65I	GGTNACC	1 cut(s)	8
EcoRI	GAATTC	1 cut(s)	591
EcoRII	CCWGG	1 cut(s)	997
EcoT14I	CCWWGG	2 cut(s)	424, 1293
ErhI	CCWWGG	2 cut(s)	424, 1293
Esp3I	CGTCTC	2 cut(s)	517, 621
FaeI	CATG	5 cut(s)	467, 925, 1076, 1141, 1297
FalI	AAGNNNNNCTT	2 cut(s)	65, 97
FaqI	GGGAC	3 cut(s)	618, 845, 1101
FatI	CATG	5 cut(s)	463, 921, 1072, 1137, 1293
FauI	CCCGC	3 cut(s)	36, 135, 160
FauNDI	CATATG	1 cut(s)	1232
FbaI	TGATCA	1 cut(s)	456
FblI	GTMKAC	1 cut(s)	478
Fnu4HI	GCNGC	7 cut(s)	77, 124, 131, 134, 234, 344, 498
FokI	GGATG	2 cut(s)	919, 1217
Fsp4HI	GCNGC	7 cut(s)	77, 124, 131, 134, 234, 344, 498
FspBI	CTAG	5 cut(s)	315, 425, 482, 1212, 1368
GlaI	GCGC	3 cut(s)	16, 50, 382
GluI	GCNGC	7 cut(s)	77, 124, 131, 134, 234, 344, 498
GsaI	CCCAGC	3 cut(s)	49, 342, 1040
GsuI	CTGGAG	1 cut(s)	1269
HaeII	RGCGCY	2 cut(s)	52, 384
HaeIII	GGCC	3 cut(s)	343, 564, 614
HgaI	GACGC	2 cut(s)	638, 1217
HhaI	GCGC	3 cut(s)	17, 51, 383
Hin1II	CATG	5 cut(s)	467, 925, 1076, 1141, 1297
Hin6I	GCGC	3 cut(s)	15, 49, 381
HinP1I	GCGC	3 cut(s)	15, 49, 381
HincII	GTYRAC	1 cut(s)	883
HindII	GTYRAC	1 cut(s)	883
HinfI	GANTC	1 cut(s)	349
HphI	GGTGA	2 cut(s)	137, 1045
Hpy166II	GTNNAC	5 cut(s)	246, 479, 883, 943, 1274
Hpy188I	TCNGA	5 cut(s)	21, 456, 810, 1168, 1204
Hpy188III	TCNNGA	7 cut(s)	116, 239, 551, 854, 869, 1130, 1138
Hpy8I	GTNNAC	5 cut(s)	246, 479, 883, 943, 1274
HpyAV	CCTTC	8 cut(s)	70, 91, 118, 384, 548, 595, 649, 1359
HpyCH4III	ACNGT	1 cut(s)	169
HpyCH4IV	ACGT	2 cut(s)	252, 363
HpyCH4V	TGCA	5 cut(s)	718, 1084, 1184, 1274, 1337
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 325, 801, 833
HpyF3I	CTNAG	4 cut(s)	240, 737, 1128, 1165
HpySE526I	ACGT	2 cut(s)	252, 363
Hsp92II	CATG	5 cut(s)	467, 925, 1076, 1141, 1297
HspAI	GCGC	3 cut(s)	15, 49, 381
Ksp22I	TGATCA	1 cut(s)	456
Kzo9I	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
LmnI	GCTCC	7 cut(s)	22, 60, 118, 241, 425, 841, 1045
Lsp1109I	GCAGC	2 cut(s)	220, 484
LweI	GCATC	3 cut(s)	320, 1171, 1230
MaeI	CTAG	5 cut(s)	315, 425, 482, 1212, 1368
MaeII	ACGT	2 cut(s)	252, 363
MaeIII	GTNAC	4 cut(s)	8, 772, 1051, 1303
MalI	GATC	6 cut(s)	144, 458, 486, 867, 1098, 1116
MboI	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
MfeI	CAATTG	1 cut(s)	1047
MflI	RGATCY	2 cut(s)	484, 865
MhlI	GDGCHC	2 cut(s)	1276, 1318
MluCI	AATT	5 cut(s)	558, 591, 956, 1047, 1174
MlyI	GAGTC	1 cut(s)	343
MmeI	TCCRAC	2 cut(s)	384, 1067
MseI	TTAA	7 cut(s)	258, 434, 821, 831, 981, 1278, 1375
MspA1I	CMGCKG	2 cut(s)	233, 1112
MspR9I	CCNGG	1 cut(s)	999
MunI	CAATTG	1 cut(s)	1047
MvaI	CCWGG	1 cut(s)	999
MvnI	CGCG	2 cut(s)	15, 1312
MwoI	GCNNNNNNNGC	4 cut(s)	308, 325, 801, 833
NcoI	CCATGG	1 cut(s)	1293
NdeI	CATATG	1 cut(s)	1232
NdeII	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
NlaIII	CATG	5 cut(s)	467, 925, 1076, 1141, 1297
NlaIV	GGNNCC	3 cut(s)	847, 930, 988
NmeAIII	GCCGAG	1 cut(s)	181
NmuCI	GTSAC	3 cut(s)	772, 1051, 1303
NspI	RCATGY	2 cut(s)	467, 1076
PagI	TCATGA	1 cut(s)	1137
PaqCI	CACCTGC	1 cut(s)	156
PkrI	GCNGC	7 cut(s)	78, 125, 132, 135, 235, 345, 499
PleI	GAGTC	1 cut(s)	343
PpsI	GAGTC	1 cut(s)	343
PshBI	ATTAAT	1 cut(s)	981
Psp6I	CCWGG	1 cut(s)	997
PspEI	GGTNACC	1 cut(s)	8
PspFI	CCCAGC	3 cut(s)	45, 338, 1036
PspGI	CCWGG	1 cut(s)	997
PspN4I	GGNNCC	3 cut(s)	847, 930, 988
PspPI	GGNCC	4 cut(s)	341, 401, 910, 929
PstNI	CAGNNNCTG	2 cut(s)	869, 1247
PsuI	RGATCY	2 cut(s)	484, 865
PvuII	CAGCTG	1 cut(s)	233
RsaI	GTAC	3 cut(s)	245, 516, 1347
RsaNI	GTAC	3 cut(s)	244, 515, 1346
SaqAI	TTAA	7 cut(s)	258, 434, 821, 831, 981, 1278, 1375
SatI	GCNGC	7 cut(s)	77, 124, 131, 134, 234, 344, 498
Sau3AI	GATC	6 cut(s)	142, 456, 484, 865, 1096, 1114
Sau96I	GGNCC	4 cut(s)	341, 401, 910, 929
SchI	GAGTC	1 cut(s)	343
ScrFI	CCNGG	1 cut(s)	999
SduI	GDGCHC	2 cut(s)	1276, 1318
SfaNI	GCATC	3 cut(s)	320, 1171, 1230
SfcI	CTRYAG	1 cut(s)	1353
SinI	GGWCC	3 cut(s)	401, 910, 929
SmlI	CTYRAG	2 cut(s)	71, 608
SmoI	CTYRAG	2 cut(s)	71, 608
Sse9I	AATT	5 cut(s)	558, 591, 956, 1047, 1174
SspMI	CTAG	5 cut(s)	315, 425, 482, 1212, 1368
StyD4I	CCNGG	1 cut(s)	997
StyI	CCWWGG	2 cut(s)	424, 1293
TaaI	ACNGT	1 cut(s)	169
TaiI	ACGT	2 cut(s)	255, 366
TaqI	TCGA	4 cut(s)	96, 552, 972, 1331
TasI	AATT	5 cut(s)	558, 591, 956, 1047, 1174
TatI	WGTACW	1 cut(s)	243
TauI	GCSGC	5 cut(s)	79, 126, 133, 136, 346
Tru1I	TTAA	7 cut(s)	258, 434, 821, 831, 981, 1278, 1375
Tru9I	TTAA	7 cut(s)	258, 434, 821, 831, 981, 1278, 1375
TscAI	CASTG	5 cut(s)	253, 602, 745, 781, 1126
TseFI	GTSAC	3 cut(s)	772, 1051, 1303
TseI	GCWGC	2 cut(s)	233, 497
Tsp45I	GTSAC	3 cut(s)	772, 1051, 1303
TspDTI	ATGAA	5 cut(s)	651, 828, 1126, 1166, 1296
TspGWI	ACGGA	3 cut(s)	541, 695, 1355
TspRI	CASTG	5 cut(s)	253, 602, 745, 781, 1126
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	3 cut(s)	401, 910, 929
VspI	ATTAAT	1 cut(s)	981
XapI	RAATTY	1 cut(s)	591
XceI	RCATGY	2 cut(s)	467, 1076
XmaJI	CCTAGG	1 cut(s)	424
XmiI	GTMKAC	1 cut(s)	478
XspI	CTAG	5 cut(s)	315, 425, 482, 1212, 1368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.