DENN domain and WD repeat-containing protein SCD1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0051881 |
| rosa_multiflora | Rmu_sc0004753.1_g000014 |
| rosa_roxburghii | Rroxscaffold_165G00436970 Rroxscaffold_1G00003450 Rroxscaffold_6G00425400 |
| rosa_samantha | Rh3AG297900 Rh5AG452700 Rh5BG359400 |
| rosa_wichuraiana | Rw3G026290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 21 |
| AgsI | TTSAA | 1 cut(s) | 222 |
| AluBI | AGCT | 2 cut(s) | 28, 38 |
| AluI | AGCT | 2 cut(s) | 28, 38 |
| AlwI | GGATC | 1 cut(s) | 21 |
| AoxI | GGCC | 1 cut(s) | 207 |
| AspS9I | GGNCC | 1 cut(s) | 208 |
| BccI | CCATC | 1 cut(s) | 113 |
| BmgT120I | GGNCC | 1 cut(s) | 208 |
| BmiI | GGNNCC | 1 cut(s) | 210 |
| BmrI | ACTGGG | 1 cut(s) | 206 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BmuI | ACTGGG | 1 cut(s) | 206 |
| BpuEI | CTTGAG | 1 cut(s) | 110 |
| BsaBI | GATNNNNATC | 1 cut(s) | 74 |
| Bse1I | ACTGG | 1 cut(s) | 212 |
| Bse8I | GATNNNNATC | 1 cut(s) | 74 |
| BseGI | GGATG | 2 cut(s) | 75, 124 |
| BseJI | GATNNNNATC | 1 cut(s) | 74 |
| BseNI | ACTGG | 1 cut(s) | 212 |
| BshFI | GGCC | 1 cut(s) | 209 |
| BsnI | GGCC | 1 cut(s) | 209 |
| Bsp143I | GATC | 1 cut(s) | 13 |
| BspANI | GGCC | 1 cut(s) | 209 |
| BspLI | GGNNCC | 1 cut(s) | 210 |
| BspPI | GGATC | 1 cut(s) | 21 |
| BsrI | ACTGG | 1 cut(s) | 212 |
| BssMI | GATC | 1 cut(s) | 13 |
| Bst4CI | ACNGT | 1 cut(s) | 186 |
| Bst6I | CTCTTC | 1 cut(s) | 23 |
| BstF5I | GGATG | 2 cut(s) | 75, 124 |
| BstKTI | GATC | 1 cut(s) | 16 |
| BstMBI | GATC | 1 cut(s) | 13 |
| BstX2I | RGATCY | 1 cut(s) | 13 |
| BstYI | RGATCY | 1 cut(s) | 13 |
| BsuRI | GGCC | 1 cut(s) | 209 |
| BtsCI | GGATG | 2 cut(s) | 75, 124 |
| Cfr13I | GGNCC | 1 cut(s) | 208 |
| CseI | GACGC | 1 cut(s) | 137 |
| CviJI | RGCY | 4 cut(s) | 7, 28, 38, 209 |
| CviKI_1 | RGCY | 4 cut(s) | 7, 28, 38, 209 |
| DpnI | GATC | 1 cut(s) | 15 |
| DpnII | GATC | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 1 cut(s) | 23 |
| EarI | CTCTTC | 1 cut(s) | 23 |
| FaiI | YATR | 2 cut(s) | 141, 158 |
| FokI | GGATG | 2 cut(s) | 82, 131 |
| HaeIII | GGCC | 1 cut(s) | 209 |
| HgaI | GACGC | 1 cut(s) | 137 |
| Hpy188I | TCNGA | 2 cut(s) | 80, 136 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 57 |
| Hpy99I | CGWCG | 1 cut(s) | 26 |
| HpyAV | CCTTC | 1 cut(s) | 109 |
| HpyCH4III | ACNGT | 1 cut(s) | 186 |
| HpyCH4IV | ACGT | 1 cut(s) | 53 |
| HpyCH4V | TGCA | 1 cut(s) | 50 |
| HpySE526I | ACGT | 1 cut(s) | 53 |
| Kzo9I | GATC | 1 cut(s) | 13 |
| LpnPI | CCDG | 2 cut(s) | 70, 225 |
| LweI | GCATC | 1 cut(s) | 73 |
| MaeII | ACGT | 1 cut(s) | 53 |
| MaeIII | GTNAC | 1 cut(s) | 193 |
| MalI | GATC | 1 cut(s) | 15 |
| MboI | GATC | 1 cut(s) | 13 |
| MboII | GAAGA | 2 cut(s) | 10, 210 |
| MflI | RGATCY | 1 cut(s) | 13 |
| MluCI | AATT | 1 cut(s) | 179 |
| MnlI | CCTC | 3 cut(s) | 18, 85, 169 |
| MseI | TTAA | 1 cut(s) | 111 |
| NdeII | GATC | 1 cut(s) | 13 |
| NlaIV | GGNNCC | 1 cut(s) | 210 |
| PspN4I | GGNNCC | 1 cut(s) | 210 |
| PspPI | GGNCC | 1 cut(s) | 208 |
| PsuI | RGATCY | 1 cut(s) | 13 |
| SaqAI | TTAA | 1 cut(s) | 111 |
| Sau3AI | GATC | 1 cut(s) | 13 |
| Sau96I | GGNCC | 1 cut(s) | 208 |
| SetI | ASST | 4 cut(s) | 30, 40, 56, 96 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| SgeI | CNNG | 8 cut(s) | 23, 37, 59, 69, 101, 203, 210, 224 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| Sse9I | AATT | 1 cut(s) | 179 |
| TaaI | ACNGT | 1 cut(s) | 186 |
| TaiI | ACGT | 1 cut(s) | 56 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 1 cut(s) | 179 |
| Tru1I | TTAA | 1 cut(s) | 111 |
| Tru9I | TTAA | 1 cut(s) | 111 |
| TspDTI | ATGAA | 1 cut(s) | 17 |