snRNP Sm proteins
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03330 |
| fragaria_vesca | FvH4_3g16480 |
| malus_domestica | MD05G1209800.v1.1 MD10G1196100.v1.1 |
| prunus_persica | Prupe.4G147700_v2.0.a1 |
| pyrus_communis | pycom10g16970 |
| rosa_chinensis | RchiOBHm_Chr5g0027471 |
| rosa_multiflora | Rmu_sc0007802.1_g000025 |
| rosa_roxburghii | Rroxscaffold_1G00052060 |
| rosa_rugosa | Rorug05G0099200 |
| rosa_samantha | Rh5AG193300 Rh5BG191400 Rh5CG211600 Rh5DG192800 |
| rosa_wichuraiana | Rw5G017620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 152 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 160 |
| AgsI | TTSAA | 1 cut(s) | 22 |
| AjnI | CCWGG | 1 cut(s) | 141 |
| AluBI | AGCT | 2 cut(s) | 55, 118 |
| AluI | AGCT | 2 cut(s) | 55, 118 |
| Alw21I | GWGCWC | 1 cut(s) | 57 |
| BaeGI | GKGCMC | 1 cut(s) | 83 |
| BanII | GRGCYC | 1 cut(s) | 57 |
| Bbv12I | GWGCWC | 1 cut(s) | 57 |
| BciT130I | CCWGG | 1 cut(s) | 143 |
| BfaI | CTAG | 2 cut(s) | 129, 230 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 212 |
| Bme1390I | CCNGG | 1 cut(s) | 143 |
| BmrFI | CCNGG | 1 cut(s) | 143 |
| BpuEI | CTTGAG | 2 cut(s) | 41, 140 |
| BsaBI | GATNNNNATC | 1 cut(s) | 102 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 160 |
| Bse8I | GATNNNNATC | 1 cut(s) | 102 |
| BseBI | CCWGG | 1 cut(s) | 143 |
| BseJI | GATNNNNATC | 1 cut(s) | 102 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 160 |
| BseSI | GKGCMC | 1 cut(s) | 83 |
| BsiHKAI | GWGCWC | 1 cut(s) | 57 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 160 |
| Bsp1286I | GDGCHC | 2 cut(s) | 57, 83 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| BssMI | GATC | 1 cut(s) | 97 |
| Bst2UI | CCWGG | 1 cut(s) | 143 |
| Bst4CI | ACNGT | 1 cut(s) | 49 |
| Bst6I | CTCTTC | 1 cut(s) | 199 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 212 |
| BstNI | CCWGG | 1 cut(s) | 143 |
| BstSCI | CCNGG | 1 cut(s) | 141 |
| BstSLI | GKGCMC | 1 cut(s) | 83 |
| BtsIMutI | CAGTG | 1 cut(s) | 45 |
| Csp6I | GTAC | 1 cut(s) | 151 |
| CviAII | CATG | 1 cut(s) | 160 |
| CviJI | RGCY | 2 cut(s) | 55, 118 |
| CviKI_1 | RGCY | 2 cut(s) | 55, 118 |
| CviQI | GTAC | 1 cut(s) | 151 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| Eam1104I | CTCTTC | 1 cut(s) | 199 |
| EarI | CTCTTC | 1 cut(s) | 199 |
| Ecl136II | GAGCTC | 1 cut(s) | 55 |
| Eco24I | GRGCYC | 1 cut(s) | 57 |
| Eco53kI | GAGCTC | 1 cut(s) | 55 |
| EcoICRI | GAGCTC | 1 cut(s) | 55 |
| EcoRII | CCWGG | 1 cut(s) | 141 |
| EcoT38I | GRGCYC | 1 cut(s) | 57 |
| FaeI | CATG | 1 cut(s) | 163 |
| FaiI | YATR | 3 cut(s) | 113, 161, 202 |
| FatI | CATG | 1 cut(s) | 159 |
| FriOI | GRGCYC | 1 cut(s) | 57 |
| FspBI | CTAG | 2 cut(s) | 129, 230 |
| Hin1II | CATG | 1 cut(s) | 163 |
| HincII | GTYRAC | 1 cut(s) | 139 |
| HindII | GTYRAC | 1 cut(s) | 139 |
| HindIII | AAGCTT | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 1 cut(s) | 139 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 58 |
| Hpy8I | GTNNAC | 1 cut(s) | 139 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyCH4III | ACNGT | 1 cut(s) | 49 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 212 |
| Hsp92II | CATG | 1 cut(s) | 163 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LmnI | GCTCC | 1 cut(s) | 52 |
| LpnPI | CCDG | 3 cut(s) | 128, 155, 220 |
| MaeI | CTAG | 2 cut(s) | 129, 230 |
| MaeIII | GTNAC | 1 cut(s) | 43 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MboII | GAAGA | 1 cut(s) | 186 |
| MhlI | GDGCHC | 2 cut(s) | 57, 83 |
| MluCI | AATT | 1 cut(s) | 186 |
| MspR9I | CCNGG | 1 cut(s) | 143 |
| MvaI | CCWGG | 1 cut(s) | 143 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 212 |
| NdeII | GATC | 1 cut(s) | 97 |
| NlaIII | CATG | 1 cut(s) | 163 |
| NmuCI | GTSAC | 1 cut(s) | 43 |
| Psp124BI | GAGCTC | 1 cut(s) | 57 |
| Psp6I | CCWGG | 1 cut(s) | 141 |
| PspGI | CCWGG | 1 cut(s) | 141 |
| RsaI | GTAC | 1 cut(s) | 152 |
| RsaNI | GTAC | 1 cut(s) | 151 |
| SacI | GAGCTC | 1 cut(s) | 57 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| ScrFI | CCNGG | 1 cut(s) | 143 |
| SduI | GDGCHC | 2 cut(s) | 57, 83 |
| SetI | ASST | 3 cut(s) | 57, 69, 120 |
| SmlI | CTYRAG | 2 cut(s) | 56, 119 |
| SmoI | CTYRAG | 2 cut(s) | 56, 119 |
| Sse9I | AATT | 1 cut(s) | 186 |
| SspMI | CTAG | 2 cut(s) | 129, 230 |
| SstI | GAGCTC | 1 cut(s) | 57 |
| StyD4I | CCNGG | 1 cut(s) | 141 |
| TaaI | ACNGT | 1 cut(s) | 49 |
| TaqI | TCGA | 2 cut(s) | 37, 96 |
| TasI | AATT | 1 cut(s) | 186 |
| TscAI | CASTG | 1 cut(s) | 52 |
| TseFI | GTSAC | 1 cut(s) | 43 |
| Tsp45I | GTSAC | 1 cut(s) | 43 |
| TspGWI | ACGGA | 1 cut(s) | 82 |
| TspRI | CASTG | 1 cut(s) | 52 |
| XspI | CTAG | 2 cut(s) | 129, 230 |