Rh5CG227500
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
23250159 .. 23255225
5067 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG227500.1

Sequence Viewer

Length: 1044 bp
ATGCTGGGTGAAGGACGTATTTGTTCTTTCTTTAAGGGGTGGATCGATGAGCAATCGTTCACAGCTGCCAAGCCCGGTACCGGCATGGCCGTTGCAATAAAGAGGCTTAACCAACAACTACAGGGCACCCTGCAGAGTCACAAGGAATGGATGGAAGAAGTTAACTGCCTTGGACAGCTGAGTCACCCAAATCTTGTAAAACTTATTGGTTACTGCCAGAAGGATGACAAGCGGCTTCTGGTGTATGAATTTGTGCCTAAAGGCAGTTTGGAAAATCATATTTTTAGAAGGTTTTCTTCTTGCTTTCAAATACTGTCATGGAACCTGCGCATGAAGATTGCACTCGGTGCTGCTAAGGCTCTAGCATTTCTTCATAGTGATGAGGCAAAATGCATATATGTGGACTTTGAGACATCTAAGATCCTTCTTGATTCAAACTATAATGTCAAAATATATGGTTATGGTTTAGCCCAGGAAGGGCCTGAAGGTTACAGAACCCGTCTCTTGGATATAGATCATGAACTTCATTGGTATGAGTATATTGAGCACAATGGCGGGCCTTATAGAGCTCCTGAGTATTTATTTGCAGATCACTTGACCCCCAGAAGCAATGTGTACAGTTTTGGAGTTGTTCTGCTCGAAATCTTGTCTGGCCGACCAGCAATTGACATAAGCCGGCCAGTGGCAGAACATGATTTAGTTCGGTTTGCTTTTACCAAGGTTCCCAGGAAACAAAGAGTTCACCAAATTATTGACATTCGTATGGAAGGCCACTACTCTAAGTCTAGAGCTGTCAAAGCACTTAAACTTGCAAGACAATGCCTGTCAGTGGACTCCAAGCTTAGGCCAGACATGCATCAGGTGATAGAAATATTGGAGAACCTTCAGTCCTCTGGTGACAGGGAAGCTTCTGGGACCTCTCAAACTGAATCTGGCCAAAATCTTCATGGAAATTCTTGCAATGATCCCAACTATCACCGGAGCAGAATCAATCGCAGGCCCAAAGCAACAGCTGCTTCTCCTCCCACGGCATCTGTTTCGTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

347

Amino Acids

39.38

Weight (kDa)

8.83

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 2 - 292 3e-32 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 21 - 289 1.7e-30 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019491)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 180
Acc16I TGCGCA 1 cut(s) 329
Acc36I ACCTGC 1 cut(s) 333
Acc65I GGTACC 1 cut(s) 77
AccB1I GGYRCC 2 cut(s) 77, 125
AciI CCGC 2 cut(s) 232, 555
AclWI GGATC 3 cut(s) 50, 415, 959
AcoI YGGCCR 4 cut(s) 87, 652, 677, 934
AcsI RAATTY 2 cut(s) 248, 952
AcuI CTGAAG 2 cut(s) 504, 869
AdeI CACNNNGTG 1 cut(s) 347
AfaI GTAC 2 cut(s) 79, 617
AfiI CCNNNNNNNGG 6 cut(s) 80, 477, 505, 682, 829, 843
AgsI TTSAA 2 cut(s) 308, 435
AjnI CCWGG 2 cut(s) 471, 725
AloI GAACNNNNNNTCC 2 cut(s) 872, 904
AluBI AGCT 7 cut(s) 65, 178, 569, 791, 841, 908, 1013
AluI AGCT 7 cut(s) 65, 178, 569, 791, 841, 908, 1013
Alw21I GWGCWC 2 cut(s) 549, 571
Alw26I GTCTC 2 cut(s) 404, 506
AlwI GGATC 3 cut(s) 50, 415, 959
AoxI GGCC 9 cut(s) 87, 479, 557, 652, 677, 769, 845, 934, 998
ApeKI GCWGC 3 cut(s) 65, 350, 1013
ApoI RAATTY 2 cut(s) 248, 952
Asp700I GAANNNNTTC 1 cut(s) 292
Asp718I GGTACC 1 cut(s) 77
AspLEI GCGC 1 cut(s) 330
AspS9I GGNCC 4 cut(s) 479, 557, 915, 999
AsuC2I CCSGG 1 cut(s) 75
AsuHPI GGTGA 6 cut(s) 20, 176, 734, 874, 908, 968
AvaII GGWCC 1 cut(s) 915
BaeGI GKGCMC 1 cut(s) 128
BalI TGGCCA 1 cut(s) 936
BanI GGYRCC 2 cut(s) 77, 125
BanII GRGCYC 1 cut(s) 571
Bbv12I GWGCWC 2 cut(s) 549, 571
BbvI GCAGC 3 cut(s) 52, 337, 1000
BccI CCATC 1 cut(s) 145
BceAI ACGGC 1 cut(s) 74
BcgI CGANNNNNNTGC 1 cut(s) 1020
BciT130I CCWGG 2 cut(s) 473, 727
BcnI CCSGG 1 cut(s) 75
BcoDI GTCTC 2 cut(s) 404, 506
BfaI CTAG 2 cut(s) 362, 786
BfmI CTRYAG 2 cut(s) 119, 131
BfuAI ACCTGC 1 cut(s) 333
BisI GCNGC 4 cut(s) 66, 233, 351, 1014
BlsI GCNGC 4 cut(s) 67, 234, 352, 1015
Bme1390I CCNGG 3 cut(s) 75, 473, 727
Bme18I GGWCC 1 cut(s) 915
BmgT120I GGNCC 4 cut(s) 479, 557, 915, 999
BmiI GGNNCC 5 cut(s) 79, 127, 323, 723, 916
BmrFI CCNGG 3 cut(s) 75, 473, 727
BmsI GCATC 2 cut(s) 865, 1040
Bpu10I CCTNAGC 2 cut(s) 354, 842
BpuMI CCSGG 1 cut(s) 75
Bsa29I ATCGAT 1 cut(s) 45
BsaBI GATNNNNATC 1 cut(s) 513
BsaJI CCNNGG 5 cut(s) 169, 471, 717, 725, 1026
BsaWI WCCGGW 1 cut(s) 978
Bsc4I CCNNNNNNNGG 6 cut(s) 80, 477, 505, 682, 829, 843
Bse118I RCCGGY 2 cut(s) 80, 675
Bse1I ACTGG 1 cut(s) 680
Bse3DI GCAATG 2 cut(s) 616, 967
Bse8I GATNNNNATC 1 cut(s) 513
BseBI CCWGG 2 cut(s) 473, 727
BseCI ATCGAT 1 cut(s) 45
BseDI CCNNGG 5 cut(s) 169, 471, 717, 725, 1026
BseGI GGATG 2 cut(s) 156, 229
BseJI GATNNNNATC 1 cut(s) 513
BseLI CCNNNNNNNGG 6 cut(s) 80, 477, 505, 682, 829, 843
BseMI GCAATG 2 cut(s) 616, 967
BseMII CTCAG 2 cut(s) 170, 564
BseNI ACTGG 1 cut(s) 680
BseRI GAGGAG 1 cut(s) 1011
BseSI GKGCMC 1 cut(s) 128
BseXI GCAGC 3 cut(s) 52, 337, 1000
BseYI CCCAGC 1 cut(s) 4
BshFI GGCC 9 cut(s) 89, 481, 559, 654, 679, 771, 847, 936, 1000
BshNI GGYRCC 2 cut(s) 77, 125
BshVI ATCGAT 1 cut(s) 45
BsiHKAI GWGCWC 2 cut(s) 549, 571
BsiSI CCGG 4 cut(s) 75, 81, 676, 979
BslFI GGGAC 1 cut(s) 928
BslI CCNNNNNNNGG 6 cut(s) 80, 477, 505, 682, 829, 843
BsmAI GTCTC 2 cut(s) 404, 506
BsmBI CGTCTC 1 cut(s) 506
BsmFI GGGAC 1 cut(s) 928
BsnI GGCC 9 cut(s) 89, 481, 559, 654, 679, 771, 847, 936, 1000
Bsp1286I GDGCHC 3 cut(s) 128, 549, 571
Bsp1407I TGTACA 1 cut(s) 615
Bsp143I GATC 5 cut(s) 42, 420, 514, 589, 964
BspACI CCGC 2 cut(s) 232, 555
BspANI GGCC 9 cut(s) 89, 481, 559, 654, 679, 771, 847, 936, 1000
BspCNI CTCAG 2 cut(s) 171, 565
BspDI ATCGAT 1 cut(s) 45
BspHI TCATGA 1 cut(s) 517
BspLI GGNNCC 5 cut(s) 79, 127, 323, 723, 916
BspMAI CTGCAG 1 cut(s) 135
BspMI ACCTGC 1 cut(s) 333
BspPI GGATC 3 cut(s) 50, 415, 959
BspT107I GGYRCC 2 cut(s) 77, 125
BsrDI GCAATG 2 cut(s) 616, 967
BsrFI RCCGGY 2 cut(s) 80, 675
BsrGI TGTACA 1 cut(s) 615
BsrI ACTGG 1 cut(s) 680
BssAI RCCGGY 2 cut(s) 80, 675
BssECI CCNNGG 5 cut(s) 169, 471, 717, 725, 1026
BssMI GATC 5 cut(s) 42, 420, 514, 589, 964
BssT1I CCWWGG 2 cut(s) 169, 717
Bst2UI CCWGG 2 cut(s) 473, 727
Bst4CI ACNGT 2 cut(s) 315, 620
BstAPI GCANNNNNTGC 2 cut(s) 347, 1013
BstAUI TGTACA 1 cut(s) 615
BstC8I GCNNGC 3 cut(s) 557, 677, 998
BstDEI CTNAG 6 cut(s) 179, 354, 417, 573, 780, 842
BstDSI CCRYGG 1 cut(s) 1026
BstF5I GGATG 2 cut(s) 156, 229
BstHHI GCGC 1 cut(s) 330
BstKTI GATC 5 cut(s) 45, 423, 517, 592, 967
BstMAI GTCTC 2 cut(s) 404, 506
BstMBI GATC 5 cut(s) 42, 420, 514, 589, 964
BstMWI GCNNNNNNNGC 5 cut(s) 347, 356, 797, 853, 1013
BstNI CCWGG 2 cut(s) 473, 727
BstNSI RCATGY 1 cut(s) 856
BstSCI CCNGG 3 cut(s) 73, 471, 725
BstSFI CTRYAG 2 cut(s) 119, 131
BstSLI GKGCMC 1 cut(s) 128
BstV1I GCAGC 3 cut(s) 52, 337, 1000
BstX2I RGATCY 1 cut(s) 420
BstYI RGATCY 1 cut(s) 420
Bsu15I ATCGAT 1 cut(s) 45
BsuRI GGCC 9 cut(s) 89, 481, 559, 654, 679, 771, 847, 936, 1000
BsuTUI ATCGAT 1 cut(s) 45
BtgI CCRYGG 1 cut(s) 1026
BtsCI GGATG 2 cut(s) 156, 229
BtsIMutI CAGTG 2 cut(s) 687, 834
BveI ACCTGC 1 cut(s) 333
Cac8I GCNNGC 3 cut(s) 557, 677, 998
CciI TCATGA 1 cut(s) 517
CfoI GCGC 1 cut(s) 330
Cfr10I RCCGGY 2 cut(s) 80, 675
Cfr13I GGNCC 4 cut(s) 479, 557, 915, 999
ClaI ATCGAT 1 cut(s) 45
Csp6I GTAC 2 cut(s) 78, 616
CviAII CATG 7 cut(s) 85, 318, 331, 518, 692, 853, 947
CviQI GTAC 2 cut(s) 78, 616
DdeI CTNAG 6 cut(s) 179, 354, 417, 573, 780, 842
DpnI GATC 5 cut(s) 44, 422, 516, 591, 966
DpnII GATC 5 cut(s) 42, 420, 514, 589, 964
DraIII CACNNNGTG 1 cut(s) 347
DrdI GACNNNNNNGTC 1 cut(s) 180
DseDI GACNNNNNNGTC 1 cut(s) 180
EaeI YGGCCR 4 cut(s) 87, 652, 677, 934
Ecl136II GAGCTC 1 cut(s) 569
Eco130I CCWWGG 2 cut(s) 169, 717
Eco24I GRGCYC 1 cut(s) 571
Eco47I GGWCC 1 cut(s) 915
Eco53kI GAGCTC 1 cut(s) 569
Eco57I CTGAAG 2 cut(s) 504, 869
EcoICRI GAGCTC 1 cut(s) 569
EcoO109I RGGNCCY 2 cut(s) 479, 915
EcoRII CCWGG 2 cut(s) 471, 725
EcoT14I CCWWGG 2 cut(s) 169, 717
EcoT22I ATGCAT 2 cut(s) 395, 858
EcoT38I GRGCYC 1 cut(s) 571
ErhI CCWWGG 2 cut(s) 169, 717
Esp3I CGTCTC 1 cut(s) 506
FaeI CATG 7 cut(s) 88, 321, 334, 521, 695, 856, 950
FalI AAGNNNNNCTT 2 cut(s) 280, 312
FaqI GGGAC 1 cut(s) 928
FatI CATG 7 cut(s) 84, 317, 330, 517, 691, 852, 946
FauI CCCGC 1 cut(s) 548
Fnu4HI GCNGC 4 cut(s) 66, 233, 351, 1014
FokI GGATG 2 cut(s) 163, 236
FriOI GRGCYC 1 cut(s) 571
Fsp4HI GCNGC 4 cut(s) 66, 233, 351, 1014
FspBI CTAG 2 cut(s) 362, 786
FspI TGCGCA 1 cut(s) 329
GlaI GCGC 1 cut(s) 329
GluI GCNGC 4 cut(s) 66, 233, 351, 1014
GsaI CCCAGC 1 cut(s) 8
HaeIII GGCC 9 cut(s) 89, 481, 559, 654, 679, 771, 847, 936, 1000
HapII CCGG 4 cut(s) 75, 81, 676, 979
HhaI GCGC 1 cut(s) 330
Hin1II CATG 7 cut(s) 88, 321, 334, 521, 695, 856, 950
Hin6I GCGC 1 cut(s) 328
HinP1I GCGC 1 cut(s) 328
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 2 cut(s) 839, 906
HinfI GANTC 6 cut(s) 136, 181, 431, 833, 929, 987
HpaI GTTAAC 1 cut(s) 163
HpaII CCGG 4 cut(s) 75, 81, 676, 979
HphI GGTGA 6 cut(s) 20, 176, 734, 874, 908, 968
Hpy166II GTNNAC 6 cut(s) 60, 163, 403, 616, 742, 832
Hpy188III TCNNGA 5 cut(s) 428, 518, 572, 786, 1041
Hpy8I GTNNAC 6 cut(s) 60, 163, 403, 616, 742, 832
HpyAV CCTTC 8 cut(s) 5, 214, 282, 434, 470, 479, 761, 893
HpyCH4III ACNGT 2 cut(s) 315, 620
HpyCH4IV ACGT 1 cut(s) 16
HpyCH4V TGCA 8 cut(s) 95, 133, 341, 393, 587, 812, 856, 960
HpyF10VI GCNNNNNNNGC 5 cut(s) 347, 356, 797, 853, 1013
HpyF3I CTNAG 6 cut(s) 179, 354, 417, 573, 780, 842
HpySE526I ACGT 1 cut(s) 16
Hsp92II CATG 7 cut(s) 88, 321, 334, 521, 695, 856, 950
HspAI GCGC 1 cut(s) 328
KpnI GGTACC 1 cut(s) 81
KroI GCCGGC 1 cut(s) 675
KroNI GCCGGC 1 cut(s) 677
KspAI GTTAAC 1 cut(s) 163
Kzo9I GATC 5 cut(s) 42, 420, 514, 589, 964
LmnI GCTCC 2 cut(s) 574, 981
Lsp1109I GCAGC 3 cut(s) 52, 337, 1000
LweI GCATC 2 cut(s) 865, 1040
MaeI CTAG 2 cut(s) 362, 786
MaeII ACGT 1 cut(s) 16
MaeIII GTNAC 5 cut(s) 137, 182, 209, 488, 896
MalI GATC 5 cut(s) 44, 422, 516, 591, 966
MboI GATC 5 cut(s) 42, 420, 514, 589, 964
MboII GAAGA 5 cut(s) 167, 288, 346, 362, 935
MfeI CAATTG 1 cut(s) 663
MflI RGATCY 1 cut(s) 420
MhlI GDGCHC 3 cut(s) 128, 549, 571
MlsI TGGCCA 1 cut(s) 936
MluCI AATT 4 cut(s) 248, 663, 747, 952
MluNI TGGCCA 1 cut(s) 936
MlyI GAGTC 3 cut(s) 145, 190, 827
MnlI CCTC 5 cut(s) 96, 376, 901, 928, 1032
Mox20I TGGCCA 1 cut(s) 936
Mph1103I ATGCAT 2 cut(s) 395, 858
MroNI GCCGGC 1 cut(s) 675
MroXI GAANNNNTTC 1 cut(s) 292
MscI TGGCCA 1 cut(s) 936
MseI TTAA 4 cut(s) 33, 108, 162, 804
MslI CAYNNNNRTG 4 cut(s) 378, 398, 531, 761
Msp20I TGGCCA 1 cut(s) 936
MspA1I CMGCKG 3 cut(s) 65, 178, 1013
MspI CCGG 4 cut(s) 75, 81, 676, 979
MspR9I CCNGG 3 cut(s) 75, 473, 727
MunI CAATTG 1 cut(s) 663
MvaI CCWGG 2 cut(s) 473, 727
MwoI GCNNNNNNNGC 5 cut(s) 347, 356, 797, 853, 1013
NaeI GCCGGC 1 cut(s) 677
NciI CCSGG 1 cut(s) 75
NdeII GATC 5 cut(s) 42, 420, 514, 589, 964
NgoMIV GCCGGC 1 cut(s) 675
NlaIII CATG 7 cut(s) 88, 321, 334, 521, 695, 856, 950
NlaIV GGNNCC 5 cut(s) 79, 127, 323, 723, 916
NmuCI GTSAC 3 cut(s) 137, 182, 896
NsbI TGCGCA 1 cut(s) 329
NsiI ATGCAT 2 cut(s) 395, 858
NspI RCATGY 1 cut(s) 856
PagI TCATGA 1 cut(s) 517
PdiI GCCGGC 1 cut(s) 677
PdmI GAANNNNTTC 1 cut(s) 292
PfeI GAWTC 3 cut(s) 431, 929, 987
PkrI GCNGC 4 cut(s) 67, 234, 352, 1015
PleI GAGTC 3 cut(s) 144, 189, 827
PpsI GAGTC 3 cut(s) 144, 189, 827
PpuMI RGGWCCY 1 cut(s) 915
Psp124BI GAGCTC 1 cut(s) 571
Psp5II RGGWCCY 1 cut(s) 915
Psp6I CCWGG 2 cut(s) 471, 725
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 471, 725
PspN4I GGNNCC 5 cut(s) 79, 127, 323, 723, 916
PspPI GGNCC 4 cut(s) 479, 557, 915, 999
PspPPI RGGWCCY 1 cut(s) 915
PstI CTGCAG 1 cut(s) 135
PsuI RGATCY 1 cut(s) 420
PvuII CAGCTG 3 cut(s) 65, 178, 1013
RsaI GTAC 2 cut(s) 79, 617
RsaNI GTAC 2 cut(s) 78, 616
RseI CAYNNNNRTG 4 cut(s) 378, 398, 531, 761
SacI GAGCTC 1 cut(s) 571
SaqAI TTAA 4 cut(s) 33, 108, 162, 804
SatI GCNGC 4 cut(s) 66, 233, 351, 1014
Sau3AI GATC 5 cut(s) 42, 420, 514, 589, 964
Sau96I GGNCC 4 cut(s) 479, 557, 915, 999
SchI GAGTC 3 cut(s) 145, 190, 827
ScrFI CCNGG 3 cut(s) 75, 473, 727
SduI GDGCHC 3 cut(s) 128, 549, 571
SfaNI GCATC 2 cut(s) 865, 1040
SfcI CTRYAG 2 cut(s) 119, 131
SinI GGWCC 1 cut(s) 915
SmiMI CAYNNNNRTG 4 cut(s) 378, 398, 531, 761
Sse9I AATT 4 cut(s) 248, 663, 747, 952
SsiI CCGC 2 cut(s) 232, 555
SspI AATATT 1 cut(s) 873
SspMI CTAG 2 cut(s) 362, 786
SstI GAGCTC 1 cut(s) 571
StyD4I CCNGG 3 cut(s) 73, 471, 725
StyI CCWWGG 2 cut(s) 169, 717
TaaI ACNGT 2 cut(s) 315, 620
TaiI ACGT 1 cut(s) 19
TaqI TCGA 2 cut(s) 45, 639
TasI AATT 4 cut(s) 248, 663, 747, 952
TatI WGTACW 1 cut(s) 615
TauI GCSGC 1 cut(s) 235
TfiI GAWTC 3 cut(s) 431, 929, 987
Tru1I TTAA 4 cut(s) 33, 108, 162, 804
Tru9I TTAA 4 cut(s) 33, 108, 162, 804
TscAI CASTG 2 cut(s) 687, 834
TseFI GTSAC 3 cut(s) 137, 182, 896
TseI GCWGC 3 cut(s) 65, 350, 1013
Tsp45I GTSAC 3 cut(s) 137, 182, 896
TspDTI ATGAA 6 cut(s) 261, 347, 362, 515, 534, 935
TspRI CASTG 2 cut(s) 687, 834
VpaK11BI GGWCC 1 cut(s) 915
XapI RAATTY 2 cut(s) 248, 952
XbaI TCTAGA 1 cut(s) 785
XceI RCATGY 1 cut(s) 856
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XmnI GAANNNNTTC 1 cut(s) 292
XspI CTAG 2 cut(s) 362, 786
Zsp2I ATGCAT 2 cut(s) 395, 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.