Ubiquitin system component Cue protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g38860 FvH4_6g20801 |
| rosa_chinensis | RchiOBHm_Chr5g0009411 |
| rosa_laevigata | RLG00000031659 |
| rosa_multiflora | Rmu_co7974186.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00067390 |
| rosa_rugosa | Rorug04G0442700 |
| rosa_samantha | Rh5AG073300 Rh5AG073900 Rh5BG069700 Rh5CG082100 Rh5CG257800 Rh5DG070000 |
| rosa_wichuraiana | Rw5G006850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 112 |
| AcsI | RAATTY | 2 cut(s) | 27, 89 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 112 |
| AgsI | TTSAA | 2 cut(s) | 32, 167 |
| AluBI | AGCT | 2 cut(s) | 17, 206 |
| AluI | AGCT | 2 cut(s) | 17, 206 |
| AoxI | GGCC | 1 cut(s) | 97 |
| ApoI | RAATTY | 2 cut(s) | 27, 89 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 27 |
| AspS9I | GGNCC | 1 cut(s) | 97 |
| AsuHPI | GGTGA | 1 cut(s) | 145 |
| BccI | CCATC | 2 cut(s) | 233, 249 |
| BlpI | GCTNAGC | 1 cut(s) | 207 |
| BmgT120I | GGNCC | 1 cut(s) | 97 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 207 |
| BpuEI | CTTGAG | 1 cut(s) | 182 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 112 |
| Bse3DI | GCAATG | 1 cut(s) | 218 |
| BseGI | GGATG | 2 cut(s) | 225, 241 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BseMI | GCAATG | 1 cut(s) | 218 |
| BseMII | CTCAG | 1 cut(s) | 221 |
| BsgI | GTGCAG | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 99 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BsnI | GGCC | 1 cut(s) | 99 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 207 |
| BspANI | GGCC | 1 cut(s) | 99 |
| BspCNI | CTCAG | 1 cut(s) | 220 |
| BsrDI | GCAATG | 1 cut(s) | 218 |
| BstC8I | GCNNGC | 1 cut(s) | 204 |
| BstDEI | CTNAG | 2 cut(s) | 207, 233 |
| BstF5I | GGATG | 2 cut(s) | 225, 241 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 124, 199, 208 |
| BstNSI | RCATGY | 1 cut(s) | 122 |
| BsuRI | GGCC | 1 cut(s) | 99 |
| BtsCI | GGATG | 2 cut(s) | 225, 241 |
| Cac8I | GCNNGC | 1 cut(s) | 204 |
| Cfr13I | GGNCC | 1 cut(s) | 97 |
| CseI | GACGC | 1 cut(s) | 68 |
| CviAII | CATG | 2 cut(s) | 119, 248 |
| CviJI | RGCY | 4 cut(s) | 17, 99, 183, 206 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 99, 183, 206 |
| DdeI | CTNAG | 2 cut(s) | 207, 233 |
| FaeI | CATG | 2 cut(s) | 122, 251 |
| FaiI | YATR | 6 cut(s) | 20, 44, 120, 144, 180, 249 |
| FatI | CATG | 2 cut(s) | 118, 247 |
| FokI | GGATG | 2 cut(s) | 212, 228 |
| HaeIII | GGCC | 1 cut(s) | 99 |
| HgaI | GACGC | 1 cut(s) | 68 |
| Hin1II | CATG | 2 cut(s) | 122, 251 |
| HinfI | GANTC | 1 cut(s) | 136 |
| HphI | GGTGA | 1 cut(s) | 145 |
| Hpy188I | TCNGA | 1 cut(s) | 51 |
| Hpy188III | TCNNGA | 1 cut(s) | 70 |
| HpyCH4V | TGCA | 2 cut(s) | 193, 216 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 124, 199, 208 |
| HpyF3I | CTNAG | 2 cut(s) | 207, 233 |
| Hsp92II | CATG | 2 cut(s) | 122, 251 |
| LmnI | GCTCC | 1 cut(s) | 115 |
| LpnPI | CCDG | 1 cut(s) | 83 |
| MboII | GAAGA | 1 cut(s) | 35 |
| MluCI | AATT | 3 cut(s) | 27, 89, 110 |
| MnlI | CCTC | 5 cut(s) | 50, 88, 206, 240, 255 |
| MroXI | GAANNNNTTC | 1 cut(s) | 27 |
| MseI | TTAA | 1 cut(s) | 84 |
| MslI | CAYNNNNRTG | 1 cut(s) | 246 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 124, 199, 208 |
| NlaIII | CATG | 2 cut(s) | 122, 251 |
| NspI | RCATGY | 1 cut(s) | 122 |
| PdmI | GAANNNNTTC | 1 cut(s) | 27 |
| PfeI | GAWTC | 1 cut(s) | 136 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 112 |
| PspPI | GGNCC | 1 cut(s) | 97 |
| RseI | CAYNNNNRTG | 1 cut(s) | 246 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| Sau96I | GGNCC | 1 cut(s) | 97 |
| SetI | ASST | 4 cut(s) | 19, 61, 198, 208 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 246 |
| SmlI | CTYRAG | 1 cut(s) | 197 |
| SmoI | CTYRAG | 1 cut(s) | 197 |
| Sse9I | AATT | 3 cut(s) | 27, 89, 110 |
| TasI | AATT | 3 cut(s) | 27, 89, 110 |
| TfiI | GAWTC | 1 cut(s) | 136 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 112 |
| XapI | RAATTY | 2 cut(s) | 27, 89 |
| XceI | RCATGY | 1 cut(s) | 122 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 181 |
| XmnI | GAANNNNTTC | 1 cut(s) | 27 |