Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0009152

Physical Location & Seq

Genomic Coordinates Forward (+)

35008256 .. 35011576

Gene Structure 3321 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG316400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGTCACGGATGCTAAAAACCCTCTTGGAGAAACCACCTGCGGTTCTTTGCTGCAGAAACTGCAGGAAATTTGGGATGAAGTTGGTGAGAGTGATGAGCAACGAGACAGAATGCTTCTGCAATTAGAGCAGGAGTGTCTGGATGTATACAAGAGAAAGGTTGAGCTGGCAGCAAAGTCAAGGGCACAGCTTCTTCAGGCATTGTCCGATGGCAAACTTGAGCTTTCCACTCTTCAATCAGCACTTGGAGAAAAAAGTTCTGTTGGAGTTCCAGAGAAGACTTCTGGAACAATCAAGGAACAGCTTGCGGCTATAGCACCAGCACTGGAACAGTTGTGGAAACAGAAAGAAGAGAGAGTAACTGAATTTTCTGATGTACAATCACAGATACAAAAGATTTGTGGAGAAATTGCTGGGAACCTTTATCTCAGTGAGACTCCTGCTGTTGTTGAGTCTGATCTGTCCCTGAAAAAGTTAGATGAATATCAATCCCAACTTCAAGATCTTCAAAAGGAAAAGAGTGAAAGGCTGCACAAGGTGCTGGAATTTGTGAGCACAGTGCATGATCTTTGTGCTGTACTTGGAATAGACTTCTACAGTACTGTTACAGAGGTTCATCCTAGCTTGAATGACTCAACTGGTGTGCAATCCAAAAGCATTAGCAATGAAACTCTATCCAGGCTGGATAAGACAGTCTTAGCACTAGAAGAAGATAAGAAGCAGAGGCTGCATAAGCTTCAAGAGTCGGCAGCACAGCTAATTGATCTCTGGAATCTGATGGATACCCCTGAAGAGGAAAGGAAACTGTTTGACCATGTTACCTGTAACATATCAGCTTCAGTTGATGAAGTGACAGTTCCTGGGGCCCTTGCGCCAGATCTAATTGAGCAGACTGAGATCGAAGTTGAGAGGCTTGATCAGTTGAAATCAAGCAGGATGAAGGAAATTGCATTTAAAAAGCAAGGGGAGCTTGAGGAGATTTTTGCTCGAGCGCACATAGAAATAGACACTGAAGCTGCCAGAGAAAAGATTATGGAACTCATTGATTCTGGGAGTGTTGAGCCTACTGAGTTACTGGCTGACATGGATGATCAGATAGCAAAAGCGAAGGATGAAGCTCTCAGCAGAAAGGACATATTGGACAAAGTTGAGAAATGGATGTCAGCCTGTGAAGAGGAGAGTTGGCTTGAGGACTACAATCGTGATGAAAACAGGTACAATGCAAGTAGAGGTGCACACCTAAATCTAAAGCGTGCAGAAAAAGCACGTATTCTGGTGAACAAAATTCCAGCTTTGGTTGACACACTGGTAGCCAAAACTCGTGTGTGGGAGGAAGAACGTAGCATATCATTTACTTATGATGGTGTTCCTCTTCTCGCTATGCTAGATGAATATGCCATGCTCAGGCAAGAAAGAGAAGAAGAGAAGCGGAGATTGAGGGATCAGAAGAAGTTCCAGGAGCTACAACACACAGAACAAGAAAGCGTATTTGGTTCAAAGCCTAGCCCTAGCCCTGCTCGACCAGTTGGCACAAAGAAGGTAGTAGGTCCTCGTGCAAATGGTGGTCCCAATGGGACTCCCAGACGACTTTCACTTAATGCTAATCAAAATGGAAGGTCGGCAGTGAAAGATGCAAAGAGGGATCCTAGACCTGTTGCTCCTATGAACTATGTTGAAGTATCGAAAGAGGATGCTGCATCCCACATTTCGGGAACTGGTTCTGGCAGTGACCCAATTCCGGCTTCACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000922 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005881 GO:0005938 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008150 GO:0008283 GO:0009524 GO:0009574 GO:0009791 GO:0009987 GO:0015630 GO:0016043 GO:0022402 GO:0022622 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032501 GO:0032502 GO:0032506 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0046983 GO:0048364 GO:0048528 GO:0048731 GO:0048856 GO:0051301 GO:0055028 GO:0061640 GO:0071840 GO:0071944 GO:0072686 GO:0090696 GO:0097435 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0099568 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MAP65_ASE1

Protein Analysis

583

Amino Acids

65.35

Weight (kDa)

5.0

Isoelectric Point (pI)

57.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MAP65_ASE1	PF03999	16 - 504	1.5e-84	Microtubule associated protein (MAP65/ASE1 family)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55230 AT5G55230 AT5G55230
fragaria_vesca	FvH4_3g23560
malus_domestica	MD03G1193200.v1.1 MD11G1209400.v1.1
prunus_persica	Prupe.4G223500_v2.0.a1 Prupe.4G223500_v2.0.a1
pyrus_communis	pycom03g14580 pycom11g18490
rosa_chinensis	RchiOBHm_Chr5g0041551
rosa_laevigata	RLG00000034078
rosa_multiflora	Rmu_sc0008429.1_g000003
rosa_roxburghii	Rroxscaffold_1G00038960
rosa_rugosa	Rorug05G0193400 Rorug05G0193400 Rorug05G0193500
rosa_samantha	Rh5AG279200 Rh5BG283500 Rh5CG316400 Rh5DG293200
rosa_wichuraiana	Rw5G026290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	47
Acc36I	ACCTGC	1 cut(s)	47
AccI	GTMKAC	1 cut(s)	147
AciI	CCGC	3 cut(s)	42, 308, 1429
AclWI	GGATC	3 cut(s)	1449, 1637, 1650
AcsI	RAATTY	4 cut(s)	69, 365, 545, 1284
AcuI	CTGAAG	4 cut(s)	179, 810, 822, 1032
AdeI	CACNNNGTG	1 cut(s)	538
AfaI	GTAC	4 cut(s)	378, 579, 601, 1217
AfiI	CCNNNNNNNGG	4 cut(s)	793, 1404, 1708, 1738
AgsI	TTSAA	8 cut(s)	236, 500, 509, 628, 740, 925, 1497, 1676
AjnI	CCWGG	3 cut(s)	677, 859, 1455
AjuI	GAANNNNNNNTTGG	3 cut(s)	1473, 1505, 1726
Alw21I	GWGCWC	2 cut(s)	557, 1237
Alw26I	GTCTC	2 cut(s)	99, 428
Alw44I	GTGCAC	1 cut(s)	1233
AlwI	GGATC	3 cut(s)	1449, 1637, 1650
AlwNI	CAGNNNCTG	3 cut(s)	61, 727, 860
Ama87I	CYCGRG	1 cut(s)	987
AoxI	GGCC	1 cut(s)	864
ApaI	GGGCCC	1 cut(s)	868
ApaLI	GTGCAC	1 cut(s)	1233
ApeKI	GCWGC	7 cut(s)	52, 170, 529, 727, 749, 1016, 1694
ApoI	RAATTY	4 cut(s)	69, 365, 545, 1284
Asp700I	GAANNNNTTC	2 cut(s)	1451, 1717
AspLEI	GCGC	2 cut(s)	874, 994
AspS9I	GGNCC	4 cut(s)	864, 865, 1547, 1565
AsuHPI	GGTGA	3 cut(s)	98, 1288, 1737
AvaI	CYCGRG	1 cut(s)	987
AvaII	GGWCC	2 cut(s)	1547, 1565
BaeGI	GKGCMC	3 cut(s)	187, 868, 1237
BamHI	GGATCC	1 cut(s)	1642
BanII	GRGCYC	1 cut(s)	868
BauI	CACGAG	2 cut(s)	1320, 1551
BbsI	GAAGAC	1 cut(s)	284
Bbv12I	GWGCWC	2 cut(s)	557, 1237
BbvI	GCAGC	7 cut(s)	39, 182, 516, 714, 761, 1003, 1681
BccI	CCATC	3 cut(s)	203, 772, 1355
BciT130I	CCWGG	3 cut(s)	679, 861, 1457
BciVI	GTATCC	1 cut(s)	775
BclI	TGATCA	2 cut(s)	916, 1090
BcoDI	GTCTC	2 cut(s)	99, 428
BfaI	CTAG	6 cut(s)	621, 704, 1385, 1503, 1509, 1647
BfmI	CTRYAG	4 cut(s)	53, 62, 312, 595
BfuAI	ACCTGC	1 cut(s)	47
BfuI	GTATCC	1 cut(s)	775
BglII	AGATCT	2 cut(s)	502, 877
BisI	GCNGC	8 cut(s)	53, 171, 309, 530, 728, 750, 1017, 1695
BlsI	GCNGC	8 cut(s)	54, 172, 310, 531, 729, 751, 1018, 1696
BmcAI	AGTACT	1 cut(s)	601
Bme1390I	CCNGG	3 cut(s)	679, 861, 1457
Bme18I	GGWCC	2 cut(s)	1547, 1565
BmeT110I	CYCGRG	1 cut(s)	987
BmgT120I	GGNCC	4 cut(s)	864, 865, 1547, 1565
BmiI	GGNNCC	5 cut(s)	419, 865, 866, 1567, 1644
BmrFI	CCNGG	3 cut(s)	679, 861, 1457
BmsI	GCATC	3 cut(s)	1621, 1681, 1706
BpiI	GAAGAC	1 cut(s)	284
Bpu10I	CCTNAGC	1 cut(s)	1403
BpuEI	CTTGAG	3 cut(s)	239, 992, 1208
BsaAI	YACGTR	1 cut(s)	1268
BsaBI	GATNNNNATC	1 cut(s)	483
BsaJI	CCNNGG	1 cut(s)	860
Bsc4I	CCNNNNNNNGG	4 cut(s)	793, 1404, 1708, 1738
Bse1I	ACTGG	6 cut(s)	330, 643, 1080, 1311, 1523, 1720
Bse3DI	GCAATG	1 cut(s)	670
Bse8I	GATNNNNATC	1 cut(s)	483
BseBI	CCWGG	3 cut(s)	679, 861, 1457
BseDI	CCNNGG	1 cut(s)	860
BseJI	GATNNNNATC	1 cut(s)	483
BseLI	CCNNNNNNNGG	4 cut(s)	793, 1404, 1708, 1738
BseMI	GCAATG	1 cut(s)	670
BseMII	CTCAG	5 cut(s)	442, 885, 1059, 1135, 1417
BseNI	ACTGG	6 cut(s)	330, 643, 1080, 1311, 1523, 1720
BseRI	GAGGAG	2 cut(s)	989, 1190
BseSI	GKGCMC	3 cut(s)	187, 868, 1237
BseXI	GCAGC	7 cut(s)	39, 182, 516, 714, 761, 1003, 1681
BseYI	CCCAGC	1 cut(s)	413
BsgI	GTGCAG	2 cut(s)	515, 1275
BshFI	GGCC	1 cut(s)	866
BsiHKAI	GWGCWC	2 cut(s)	557, 1237
BsiHKCI	CYCGRG	1 cut(s)	987
BsiSI	CCGG	1 cut(s)	1739
BslFI	GGGAC	3 cut(s)	448, 1551, 1588
BslI	CCNNNNNNNGG	4 cut(s)	793, 1404, 1708, 1738
BsmAI	GTCTC	2 cut(s)	99, 428
BsmFI	GGGAC	3 cut(s)	448, 1551, 1588
BsmI	GAATGC	1 cut(s)	117
BsnI	GGCC	1 cut(s)	866
BsoBI	CYCGRG	1 cut(s)	987
Bsp120I	GGGCCC	1 cut(s)	864
Bsp1286I	GDGCHC	4 cut(s)	187, 557, 868, 1237
Bsp1407I	TGTACA	1 cut(s)	376
BspACI	CCGC	3 cut(s)	42, 308, 1429
BspANI	GGCC	1 cut(s)	866
BspCNI	CTCAG	5 cut(s)	441, 886, 1060, 1134, 1416
BspLI	GGNNCC	5 cut(s)	419, 865, 866, 1567, 1644
BspMAI	CTGCAG	2 cut(s)	57, 66
BspMI	ACCTGC	1 cut(s)	47
BspPI	GGATC	3 cut(s)	1449, 1637, 1650
BsrDI	GCAATG	1 cut(s)	670
BsrGI	TGTACA	1 cut(s)	376
BsrI	ACTGG	6 cut(s)	330, 643, 1080, 1311, 1523, 1720
BssECI	CCNNGG	1 cut(s)	860
BssNAI	GTATAC	1 cut(s)	148
BssSI	CACGAG	2 cut(s)	1320, 1551
Bst1107I	GTATAC	1 cut(s)	148
Bst2BI	CACGAG	2 cut(s)	1320, 1551
Bst2UI	CCWGG	3 cut(s)	679, 861, 1457
Bst4CI	ACNGT	7 cut(s)	333, 559, 599, 604, 694, 807, 856
Bst6I	CTCTTC	6 cut(s)	237, 345, 786, 1167, 1377, 1416
BstAPI	GCANNNNNTGC	3 cut(s)	61, 538, 727
BstAUI	TGTACA	1 cut(s)	376
BstBAI	YACGTR	1 cut(s)	1268
BstC8I	GCNNGC	3 cut(s)	168, 306, 1254
BstDEI	CTNAG	6 cut(s)	428, 697, 894, 1068, 1121, 1403
BstHHI	GCGC	2 cut(s)	874, 994
BstMAI	GTCTC	2 cut(s)	99, 428
BstMWI	GCNNNNNNNGC	8 cut(s)	61, 127, 314, 538, 727, 733, 967, 1262
BstNI	CCWGG	3 cut(s)	679, 861, 1457
BstSCI	CCNGG	3 cut(s)	677, 859, 1455
BstSFI	CTRYAG	4 cut(s)	53, 62, 312, 595
BstSLI	GKGCMC	3 cut(s)	187, 868, 1237
BstV1I	GCAGC	7 cut(s)	39, 182, 516, 714, 761, 1003, 1681
BstV2I	GAAGAC	1 cut(s)	284
BstX2I	RGATCY	3 cut(s)	502, 877, 1642
BstYI	RGATCY	3 cut(s)	502, 877, 1642
BstZ17I	GTATAC	1 cut(s)	148
BsuI	GTATCC	1 cut(s)	775
BsuRI	GGCC	1 cut(s)	866
BtsI	GCAGTG	2 cut(s)	1629, 1732
BtsIMutI	CAGTG	7 cut(s)	323, 436, 564, 1008, 1304, 1629, 1732
BveI	ACCTGC	1 cut(s)	47
Cac8I	GCNNGC	3 cut(s)	168, 306, 1254
CaiI	CAGNNNCTG	3 cut(s)	61, 727, 860
CfoI	GCGC	2 cut(s)	874, 994
Cfr13I	GGNCC	4 cut(s)	864, 865, 1547, 1565
Csp6I	GTAC	4 cut(s)	377, 578, 600, 1216
CviAII	CATG	4 cut(s)	563, 815, 1084, 1399
CviQI	GTAC	4 cut(s)	377, 578, 600, 1216
DdeI	CTNAG	6 cut(s)	428, 697, 894, 1068, 1121, 1403
DraI	TTTAAA	1 cut(s)	955
DraIII	CACNNNGTG	1 cut(s)	538
Eam1104I	CTCTTC	6 cut(s)	237, 345, 786, 1167, 1377, 1416
EarI	CTCTTC	6 cut(s)	237, 345, 786, 1167, 1377, 1416
Eco24I	GRGCYC	1 cut(s)	868
Eco47I	GGWCC	2 cut(s)	1547, 1565
Eco57I	CTGAAG	4 cut(s)	179, 810, 822, 1032
Eco88I	CYCGRG	1 cut(s)	987
EcoO109I	RGGNCCY	3 cut(s)	864, 865, 1547
EcoRII	CCWGG	3 cut(s)	677, 859, 1455
EcoT38I	GRGCYC	1 cut(s)	868
FaeI	CATG	4 cut(s)	566, 818, 1087, 1402
FalI	AAGNNNNNCTT	4 cut(s)	680, 712, 954, 986
FaqI	GGGAC	3 cut(s)	448, 1551, 1588
FatI	CATG	4 cut(s)	562, 814, 1083, 1398
FbaI	TGATCA	2 cut(s)	916, 1090
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	8 cut(s)	53, 171, 309, 530, 728, 750, 1017, 1695
FriOI	GRGCYC	1 cut(s)	868
Fsp4HI	GCNGC	8 cut(s)	53, 171, 309, 530, 728, 750, 1017, 1695
FspBI	CTAG	6 cut(s)	621, 704, 1385, 1503, 1509, 1647
GlaI	GCGC	2 cut(s)	873, 993
GluI	GCNGC	8 cut(s)	53, 171, 309, 530, 728, 750, 1017, 1695
GsaI	CCCAGC	1 cut(s)	417
HaeIII	GGCC	1 cut(s)	866
HapII	CCGG	1 cut(s)	1739
HhaI	GCGC	2 cut(s)	874, 994
Hin1II	CATG	4 cut(s)	566, 818, 1087, 1402
Hin6I	GCGC	2 cut(s)	872, 992
HinP1I	GCGC	2 cut(s)	872, 992
HincII	GTYRAC	1 cut(s)	1300
HindII	GTYRAC	1 cut(s)	1300
HindIII	AAGCTT	1 cut(s)	734
HinfI	GANTC	7 cut(s)	436, 452, 632, 743, 772, 1046, 1576
HpaII	CCGG	1 cut(s)	1739
HphI	GGTGA	3 cut(s)	98, 1288, 1737
Hpy166II	GTNNAC	4 cut(s)	148, 1235, 1279, 1300
Hpy188I	TCNGA	6 cut(s)	208, 373, 457, 777, 1095, 1446
Hpy188III	TCNNGA	8 cut(s)	140, 272, 285, 500, 740, 769, 1202, 1710
Hpy8I	GTNNAC	4 cut(s)	148, 1235, 1279, 1300
HpyAV	CCTTC	4 cut(s)	934, 1102, 1531, 1608
HpyCH4III	ACNGT	7 cut(s)	333, 559, 599, 604, 694, 807, 856
HpyCH4IV	ACGT	2 cut(s)	1267, 1339
HpyF10VI	GCNNNNNNNGC	8 cut(s)	61, 127, 314, 538, 727, 733, 967, 1262
HpyF3I	CTNAG	6 cut(s)	428, 697, 894, 1068, 1121, 1403
HpySE526I	ACGT	2 cut(s)	1267, 1339
Hsp92II	CATG	4 cut(s)	566, 818, 1087, 1402
HspAI	GCGC	2 cut(s)	872, 992
Ksp22I	TGATCA	2 cut(s)	916, 1090
LmnI	GCTCC	3 cut(s)	967, 1459, 1663
Lsp1109I	GCAGC	7 cut(s)	39, 182, 516, 714, 761, 1003, 1681
LweI	GCATC	3 cut(s)	1621, 1681, 1706
MaeI	CTAG	6 cut(s)	621, 704, 1385, 1503, 1509, 1647
MaeII	ACGT	2 cut(s)	1267, 1339
MaeIII	GTNAC	8 cut(s)	4, 358, 604, 817, 824, 850, 1071, 1727
MflI	RGATCY	3 cut(s)	502, 877, 1642
MhlI	GDGCHC	4 cut(s)	187, 557, 868, 1237
MlyI	GAGTC	5 cut(s)	430, 461, 626, 752, 1570
MmeI	TCCRAC	1 cut(s)	244
MroXI	GAANNNNTTC	2 cut(s)	1451, 1717
MseI	TTAA	2 cut(s)	954, 1596
MspI	CCGG	1 cut(s)	1739
MspR9I	CCNGG	3 cut(s)	679, 861, 1457
Mva1269I	GAATGC	1 cut(s)	117
MvaI	CCWGG	3 cut(s)	679, 861, 1457
MwoI	GCNNNNNNNGC	8 cut(s)	61, 127, 314, 538, 727, 733, 967, 1262
NlaIII	CATG	4 cut(s)	566, 818, 1087, 1402
NlaIV	GGNNCC	5 cut(s)	419, 865, 866, 1567, 1644
NmuCI	GTSAC	3 cut(s)	4, 850, 1727
PaeR7I	CTCGAG	1 cut(s)	987
PaqCI	CACCTGC	1 cut(s)	47
PctI	GAATGC	1 cut(s)	117
PdmI	GAANNNNTTC	2 cut(s)	1451, 1717
PfeI	GAWTC	2 cut(s)	772, 1046
PfoI	TCCNGGA	1 cut(s)	1455
PkrI	GCNGC	8 cut(s)	54, 172, 310, 531, 729, 751, 1018, 1696
PleI	GAGTC	5 cut(s)	430, 460, 626, 751, 1570
PpsI	GAGTC	5 cut(s)	430, 460, 626, 751, 1570
Ppu21I	YACGTR	1 cut(s)	1268
PpuMI	RGGWCCY	1 cut(s)	1547
Psp5II	RGGWCCY	1 cut(s)	1547
Psp6I	CCWGG	3 cut(s)	677, 859, 1455
PspFI	CCCAGC	1 cut(s)	413
PspGI	CCWGG	3 cut(s)	677, 859, 1455
PspN4I	GGNNCC	5 cut(s)	419, 865, 866, 1567, 1644
PspOMI	GGGCCC	1 cut(s)	864
PspPI	GGNCC	4 cut(s)	864, 865, 1547, 1565
PspPPI	RGGWCCY	1 cut(s)	1547
PspXI	VCTCGAGB	1 cut(s)	987
PstI	CTGCAG	2 cut(s)	57, 66
PstNI	CAGNNNCTG	3 cut(s)	61, 727, 860
PsuI	RGATCY	3 cut(s)	502, 877, 1642
RsaI	GTAC	4 cut(s)	378, 579, 601, 1217
RsaNI	GTAC	4 cut(s)	377, 578, 600, 1216
SaqAI	TTAA	2 cut(s)	954, 1596
SatI	GCNGC	8 cut(s)	53, 171, 309, 530, 728, 750, 1017, 1695
Sau96I	GGNCC	4 cut(s)	864, 865, 1547, 1565
ScaI	AGTACT	1 cut(s)	601
SchI	GAGTC	5 cut(s)	430, 461, 626, 752, 1570
ScrFI	CCNGG	3 cut(s)	679, 861, 1457
SduI	GDGCHC	4 cut(s)	187, 557, 868, 1237
SfaNI	GCATC	3 cut(s)	1621, 1681, 1706
SfcI	CTRYAG	4 cut(s)	53, 62, 312, 595
Sfr274I	CTCGAG	1 cut(s)	987
SinI	GGWCC	2 cut(s)	1547, 1565
SlaI	CTCGAG	1 cut(s)	987
SmlI	CTYRAG	4 cut(s)	218, 971, 987, 1187
SmoI	CTYRAG	4 cut(s)	218, 971, 987, 1187
SsiI	CCGC	3 cut(s)	42, 308, 1429
SspMI	CTAG	6 cut(s)	621, 704, 1385, 1503, 1509, 1647
StyD4I	CCNGG	3 cut(s)	677, 859, 1455
TaaI	ACNGT	7 cut(s)	333, 559, 599, 604, 694, 807, 856
TaiI	ACGT	2 cut(s)	1270, 1342
TaqI	TCGA	4 cut(s)	900, 988, 1519, 1682
TatI	WGTACW	3 cut(s)	376, 577, 599
TauI	GCSGC	1 cut(s)	311
TfiI	GAWTC	2 cut(s)	772, 1046
Tru1I	TTAA	2 cut(s)	954, 1596
Tru9I	TTAA	2 cut(s)	954, 1596
TscAI	CASTG	7 cut(s)	330, 436, 564, 1015, 1311, 1629, 1732
TseFI	GTSAC	3 cut(s)	4, 850, 1727
TseI	GCWGC	7 cut(s)	52, 170, 529, 727, 749, 1016, 1694
Tsp45I	GTSAC	3 cut(s)	4, 850, 1727
TspGWI	ACGGA	1 cut(s)	23
TspRI	CASTG	7 cut(s)	330, 436, 564, 1015, 1311, 1629, 1732
VneI	GTGCAC	1 cut(s)	1233
VpaK11BI	GGWCC	2 cut(s)	1547, 1565
XapI	RAATTY	4 cut(s)	69, 365, 545, 1284
XhoI	CTCGAG	1 cut(s)	987
XmiI	GTMKAC	1 cut(s)	147
XmnI	GAANNNNTTC	2 cut(s)	1451, 1717
XspI	CTAG	6 cut(s)	621, 704, 1385, 1503, 1509, 1647
ZrmI	AGTACT	1 cut(s)	601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.