Rh5CG320600

Leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
35524654 .. 35524962
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG320600.1

Sequence Viewer

Length: 309 bp
ATGGATAAGTCGAAAGATTTGTACAACCTTGATGACATTCTTGATCCATTCATTGGTTTAGGAACAGAGCTGAAAGGTGTAGAAATGTTTGTGGATTTGGCAATGTCTTGTGTAGAAGAACTAGGGGATAACAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACATTATACAAATCGCTGCTTTGAACGCTGGTACTAATCCATTGTCCACTTCAGCAAGTTATGAGGAATATGACTGTAAGGACAGCACCGAGGATGTTTACAGCAGACCCTTTGATTATAGTGGAGCTTTTGACGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

11.3

Weight (kDa)

4.05

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018532)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 53
AclWI GGATC 1 cut(s) 38
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 2 cut(s) 23, 202
AfiI CCNNNNNNNGG 2 cut(s) 53, 143
AgsI TTSAA 1 cut(s) 193
AluBI AGCT 2 cut(s) 70, 296
AluI AGCT 2 cut(s) 70, 296
AlwI GGATC 1 cut(s) 38
ApeKI GCWGC 1 cut(s) 185
AsuHPI GGTGA 1 cut(s) 166
BbvI GCAGC 1 cut(s) 172
BfaI CTAG 1 cut(s) 122
BisI GCNGC 1 cut(s) 186
BlsI GCNGC 1 cut(s) 187
BsaJI CCNNGG 1 cut(s) 258
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 143
Bse3DI GCAATG 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 258
BseGI GGATG 1 cut(s) 268
BseLI CCNNNNNNNGG 2 cut(s) 53, 143
BseMI GCAATG 1 cut(s) 108
BseXI GCAGC 1 cut(s) 172
BslI CCNNNNNNNGG 2 cut(s) 53, 143
Bsp1407I TGTACA 1 cut(s) 21
Bsp143I GATC 1 cut(s) 43
BspPI GGATC 1 cut(s) 38
BsrDI GCAATG 1 cut(s) 108
BsrGI TGTACA 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 258
BssMI GATC 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 245
BstAUI TGTACA 1 cut(s) 21
BstF5I GGATG 1 cut(s) 268
BstKTI GATC 1 cut(s) 46
BstMBI GATC 1 cut(s) 43
BstMWI GCNNNNNNNGC 1 cut(s) 194
BstV1I GCAGC 1 cut(s) 172
BtsCI GGATG 1 cut(s) 268
Csp6I GTAC 2 cut(s) 22, 201
CviJI RGCY 2 cut(s) 70, 296
CviKI_1 RGCY 2 cut(s) 70, 296
CviQI GTAC 2 cut(s) 22, 201
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 204
FaiI YATR 4 cut(s) 176, 231, 240, 288
Fnu4HI GCNGC 1 cut(s) 186
FokI GGATG 1 cut(s) 275
Fsp4HI GCNGC 1 cut(s) 186
FspBI CTAG 1 cut(s) 122
GluI GCNGC 1 cut(s) 186
HphI GGTGA 1 cut(s) 166
Hpy166II GTNNAC 2 cut(s) 216, 268
Hpy188III TCNNGA 1 cut(s) 41
Hpy8I GTNNAC 2 cut(s) 216, 268
HpyCH4III ACNGT 1 cut(s) 245
HpyF10VI GCNNNNNNNGC 1 cut(s) 194
Kzo9I GATC 1 cut(s) 43
LmnI GCTCC 1 cut(s) 293
LpnPI CCDG 1 cut(s) 183
Lsp1109I GCAGC 1 cut(s) 172
MaeI CTAG 1 cut(s) 122
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MboII GAAGA 1 cut(s) 128
MnlI CCTC 2 cut(s) 226, 253
MwoI GCNNNNNNNGC 1 cut(s) 194
NdeII GATC 1 cut(s) 43
PflMI CCANNNNNTGG 1 cut(s) 53
PkrI GCNGC 1 cut(s) 187
RsaI GTAC 2 cut(s) 23, 202
RsaNI GTAC 2 cut(s) 22, 201
SatI GCNGC 1 cut(s) 186
Sau3AI GATC 1 cut(s) 43
SetI ASST 4 cut(s) 30, 72, 79, 298
SgeI CNNG 8 cut(s) 41, 53, 120, 134, 150, 210, 237, 271
SspMI CTAG 1 cut(s) 122
TaaI ACNGT 1 cut(s) 245
TaqI TCGA 1 cut(s) 11
TatI WGTACW 1 cut(s) 21
TseI GCWGC 1 cut(s) 185
TspDTI ATGAA 1 cut(s) 40
Van91I CCANNNNNTGG 1 cut(s) 53
XspI CTAG 1 cut(s) 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.