Rh5CG380100

Ankyrin repeat domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0017439
Physical Location & Seq
Reverse (-)
49703100 .. 49704415
1316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG380100.1

Sequence Viewer

Length: 642 bp
ATGGTCAATTTTGCTAATGGTTCTTCACTTCTTCTCAGCAGTTGTTCTTCCGGAGCAGAGTATGGCATCGGAGAAGGCGGGATTAGCGGTGAACAAGAAAGGATTGACATTGAAAGCATCGATGCTGCCGACAGGGAAGGGTCTGGAGGCACGTTTTCCGGGACGCCACCACCCATCTCATTTGTGGGCCCACACGTGGTGGAGTTTCTCATTTATCAGCGGACCTGGATCTCTGGGTTCGATTTCTTCTTCAATAAAGCAGTTTCCAGGTGCTCTGGATTGGAGCTGACGGTGCTGCTGAGACCCGCCATAGCTTCTGGCAATGCGAACTTGGTCTCGAGCTTGATCGACGCCGGAGGAAATGTGAATCGAAAAGTTTCAAATTCTGGGTGTTTGTTGTCTCTGGCTGTTCGGAACAGAAATATTGAAGCTGTGAAGATTCTTATAGCGTGCGGCTGTAAAGTCGATAACTCGGTTTTGCACGACGCGACGGCGATGAACAGGGTTGATTTGGTGGAGATTTTGTGCAAGAATTTGCCGGAAAACGTTTTGTCTCTCTGCAACGACGAGGAGAGAGATGATGGCGGCGACGGTGGGCTCAAACTTTTGCTTCTTGGAGATGTCTCTCTGCAATTCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_4

Protein Analysis

213

Amino Acids

22.45

Weight (kDa)

4.62

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 103 - 178 5.9e-09 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 488
AccIII TCCGGA 1 cut(s) 50
AciI CCGC 6 cut(s) 78, 87, 220, 306, 453, 585
AclI AACGTT 1 cut(s) 546
AclWI GGATC 1 cut(s) 236
AcsI RAATTY 2 cut(s) 382, 532
AcvI CACGTG 1 cut(s) 196
AcyI GRCGYC 2 cut(s) 164, 351
AdeI CACNNNGTG 1 cut(s) 199
AfiI CCNNNNNNNGG 1 cut(s) 196
AflIII ACRYGT 1 cut(s) 193
AgsI TTSAA 4 cut(s) 113, 253, 381, 428
AjnI CCWGG 2 cut(s) 224, 266
AluBI AGCT 4 cut(s) 286, 314, 342, 431
AluI AGCT 4 cut(s) 286, 314, 342, 431
Alw21I GWGCWC 1 cut(s) 275
Alw26I GTCTC 5 cut(s) 295, 340, 405, 558, 628
AlwI GGATC 1 cut(s) 236
Ama87I CYCGRG 1 cut(s) 337
Aor13HI TCCGGA 1 cut(s) 50
AoxI GGCC 1 cut(s) 187
ApaI GGGCCC 1 cut(s) 191
ApeKI GCWGC 2 cut(s) 125, 295
ApoI RAATTY 2 cut(s) 382, 532
Asp700I GAANNNNTTC 1 cut(s) 376
AspS9I GGNCC 3 cut(s) 187, 188, 222
AsuC2I CCSGG 1 cut(s) 160
AsuHPI GGTGA 1 cut(s) 101
AvaI CYCGRG 1 cut(s) 337
AvaII GGWCC 1 cut(s) 222
BaeGI GKGCMC 1 cut(s) 191
BanII GRGCYC 2 cut(s) 191, 600
BbrPI CACGTG 1 cut(s) 196
Bbv12I GWGCWC 1 cut(s) 275
BbvI GCAGC 2 cut(s) 112, 282
BccI CCATC 2 cut(s) 182, 575
BceAI ACGGC 1 cut(s) 507
BciT130I CCWGG 2 cut(s) 226, 268
BcnI CCSGG 1 cut(s) 160
BcoDI GTCTC 5 cut(s) 295, 340, 405, 558, 628
BisI GCNGC 4 cut(s) 126, 296, 454, 586
BlsI GCNGC 4 cut(s) 127, 297, 455, 587
Bme1390I CCNGG 3 cut(s) 160, 226, 268
Bme18I GGWCC 1 cut(s) 222
BmeT110I CYCGRG 1 cut(s) 337
BmgT120I GGNCC 3 cut(s) 187, 188, 222
BmiI GGNNCC 1 cut(s) 189
BmrFI CCNGG 3 cut(s) 160, 226, 268
BmsI GCATC 3 cut(s) 75, 112, 126
BpmI CTGGAG 1 cut(s) 165
BpuMI CCSGG 1 cut(s) 160
Bsa29I ATCGAT 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 196
BsaHI GRCGYC 2 cut(s) 164, 351
BsaI GGTCTC 2 cut(s) 295, 340
BsaWI WCCGGW 1 cut(s) 50
BsaXI ACNNNNNCTCC 4 cut(s) 348, 378, 509, 539
Bsc4I CCNNNNNNNGG 1 cut(s) 196
Bse3DI GCAATG 1 cut(s) 328
BseAI TCCGGA 1 cut(s) 50
BseBI CCWGG 2 cut(s) 226, 268
BseCI ATCGAT 1 cut(s) 120
BseLI CCNNNNNNNGG 1 cut(s) 196
BseMI GCAATG 1 cut(s) 328
BseMII CTCAG 2 cut(s) 49, 290
BseRI GAGGAG 1 cut(s) 584
BseSI GKGCMC 1 cut(s) 191
BseXI GCAGC 2 cut(s) 112, 282
Bsh1236I CGCG 1 cut(s) 488
BshFI GGCC 1 cut(s) 189
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 1 cut(s) 275
BsiHKCI CYCGRG 1 cut(s) 337
BsiSI CCGG 4 cut(s) 51, 159, 354, 539
BslFI GGGAC 1 cut(s) 175
BslI CCNNNNNNNGG 1 cut(s) 196
BsmAI GTCTC 5 cut(s) 295, 340, 405, 558, 628
BsmFI GGGAC 1 cut(s) 175
BsnI GGCC 1 cut(s) 189
Bso31I GGTCTC 2 cut(s) 295, 340
BsoBI CYCGRG 1 cut(s) 337
Bsp120I GGGCCC 1 cut(s) 187
Bsp1286I GDGCHC 3 cut(s) 191, 275, 600
Bsp13I TCCGGA 1 cut(s) 50
Bsp143I GATC 2 cut(s) 228, 345
BspACI CCGC 6 cut(s) 78, 87, 220, 306, 453, 585
BspANI GGCC 1 cut(s) 189
BspCNI CTCAG 2 cut(s) 48, 291
BspDI ATCGAT 1 cut(s) 120
BspEI TCCGGA 1 cut(s) 50
BspFNI CGCG 1 cut(s) 488
BspLI GGNNCC 1 cut(s) 189
BspPI GGATC 1 cut(s) 236
BspTNI GGTCTC 2 cut(s) 295, 340
BsrDI GCAATG 1 cut(s) 328
BssMI GATC 2 cut(s) 228, 345
BssNI GRCGYC 2 cut(s) 164, 351
Bst2UI CCWGG 2 cut(s) 226, 268
Bst4CI ACNGT 2 cut(s) 292, 593
BstACI GRCGYC 2 cut(s) 164, 351
BstBAI YACGTR 1 cut(s) 196
BstC8I GCNNGC 1 cut(s) 451
BstDEI CTNAG 2 cut(s) 35, 299
BstFNI CGCG 1 cut(s) 488
BstKTI GATC 2 cut(s) 231, 348
BstMAI GTCTC 5 cut(s) 295, 340, 405, 558, 628
BstMBI GATC 2 cut(s) 228, 345
BstMWI GCNNNNNNNGC 2 cut(s) 84, 292
BstNI CCWGG 2 cut(s) 226, 268
BstSCI CCNGG 3 cut(s) 158, 224, 266
BstSLI GKGCMC 1 cut(s) 191
BstUI CGCG 1 cut(s) 488
BstV1I GCAGC 2 cut(s) 112, 282
BstX2I RGATCY 1 cut(s) 228
BstYI RGATCY 1 cut(s) 228
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 1 cut(s) 189
BsuTUI ATCGAT 1 cut(s) 120
BtgZI GCGATG 1 cut(s) 509
Cac8I GCNNGC 1 cut(s) 451
Cfr13I GGNCC 3 cut(s) 187, 188, 222
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 3 cut(s) 172, 359, 494
CviJI RGCY 8 cut(s) 189, 286, 314, 342, 407, 431, 456, 598
CviKI_1 RGCY 8 cut(s) 189, 286, 314, 342, 407, 431, 456, 598
DdeI CTNAG 2 cut(s) 35, 299
DpnI GATC 2 cut(s) 230, 347
DpnII GATC 2 cut(s) 228, 345
DraIII CACNNNGTG 1 cut(s) 199
Eco24I GRGCYC 2 cut(s) 191, 600
Eco31I GGTCTC 2 cut(s) 295, 340
Eco47I GGWCC 1 cut(s) 222
Eco72I CACGTG 1 cut(s) 196
Eco88I CYCGRG 1 cut(s) 337
EcoRII CCWGG 2 cut(s) 224, 266
EcoT38I GRGCYC 2 cut(s) 191, 600
FaiI YATR 3 cut(s) 63, 311, 446
FaqI GGGAC 1 cut(s) 175
FauI CCCGC 2 cut(s) 71, 313
Fnu4HI GCNGC 4 cut(s) 126, 296, 454, 586
FriOI GRGCYC 2 cut(s) 191, 600
Fsp4HI GCNGC 4 cut(s) 126, 296, 454, 586
GluI GCNGC 4 cut(s) 126, 296, 454, 586
GsuI CTGGAG 1 cut(s) 165
HaeIII GGCC 1 cut(s) 189
HapII CCGG 4 cut(s) 51, 159, 354, 539
HgaI GACGC 3 cut(s) 172, 359, 494
Hin1I GRCGYC 2 cut(s) 164, 351
HinfI GANTC 2 cut(s) 367, 439
HpaII CCGG 4 cut(s) 51, 159, 354, 539
HphI GGTGA 1 cut(s) 101
Hpy166II GTNNAC 1 cut(s) 92
Hpy188I TCNGA 2 cut(s) 71, 414
Hpy188III TCNNGA 4 cut(s) 51, 144, 276, 337
Hpy8I GTNNAC 1 cut(s) 92
Hpy99I CGWCG 5 cut(s) 353, 488, 493, 569, 593
HpyAV CCTTC 2 cut(s) 68, 131
HpyCH4III ACNGT 2 cut(s) 292, 593
HpyCH4IV ACGT 3 cut(s) 152, 195, 546
HpyCH4V TGCA 4 cut(s) 481, 528, 561, 631
HpyF10VI GCNNNNNNNGC 2 cut(s) 84, 292
HpyF3I CTNAG 2 cut(s) 35, 299
HpySE526I ACGT 3 cut(s) 152, 195, 546
Hsp92I GRCGYC 2 cut(s) 164, 351
Kpn2I TCCGGA 1 cut(s) 50
Kzo9I GATC 2 cut(s) 228, 345
LmnI GCTCC 2 cut(s) 53, 283
Lsp1109I GCAGC 2 cut(s) 112, 282
LweI GCATC 3 cut(s) 75, 112, 126
MaeII ACGT 3 cut(s) 152, 195, 546
MalI GATC 2 cut(s) 230, 347
MboI GATC 2 cut(s) 228, 345
MboII GAAGA 6 cut(s) 15, 23, 39, 238, 241, 448
MflI RGATCY 1 cut(s) 228
MhlI GDGCHC 3 cut(s) 191, 275, 600
MluCI AATT 4 cut(s) 7, 382, 532, 632
MnlI CCTC 3 cut(s) 140, 350, 562
MroI TCCGGA 1 cut(s) 50
MroXI GAANNNNTTC 1 cut(s) 376
MseI TTAA 1 cut(s) 640
MspA1I CMGCKG 1 cut(s) 220
MspI CCGG 4 cut(s) 51, 159, 354, 539
MspR9I CCNGG 3 cut(s) 160, 226, 268
MvaI CCWGG 2 cut(s) 226, 268
MvnI CGCG 1 cut(s) 488
MwoI GCNNNNNNNGC 2 cut(s) 84, 292
NciI CCSGG 1 cut(s) 160
NdeII GATC 2 cut(s) 228, 345
NlaIV GGNNCC 1 cut(s) 189
PaeR7I CTCGAG 1 cut(s) 337
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PdmI GAANNNNTTC 1 cut(s) 376
PfeI GAWTC 2 cut(s) 367, 439
PfoI TCCNGGA 1 cut(s) 158
PkrI GCNGC 4 cut(s) 127, 297, 455, 587
PmaCI CACGTG 1 cut(s) 196
PmlI CACGTG 1 cut(s) 196
Ppu21I YACGTR 1 cut(s) 196
Psp1406I AACGTT 1 cut(s) 546
Psp6I CCWGG 2 cut(s) 224, 266
PspCI CACGTG 1 cut(s) 196
PspGI CCWGG 2 cut(s) 224, 266
PspN4I GGNNCC 1 cut(s) 189
PspOMI GGGCCC 1 cut(s) 187
PspPI GGNCC 3 cut(s) 187, 188, 222
PsuI RGATCY 1 cut(s) 228
SaqAI TTAA 1 cut(s) 640
SatI GCNGC 4 cut(s) 126, 296, 454, 586
Sau3AI GATC 2 cut(s) 228, 345
Sau96I GGNCC 3 cut(s) 187, 188, 222
ScrFI CCNGG 3 cut(s) 160, 226, 268
SduI GDGCHC 3 cut(s) 191, 275, 600
SetI ASST 9 cut(s) 155, 198, 227, 272, 288, 316, 344, 433, 549
SfaNI GCATC 3 cut(s) 75, 112, 126
Sfr274I CTCGAG 1 cut(s) 337
SinI GGWCC 1 cut(s) 222
SlaI CTCGAG 1 cut(s) 337
SmlI CTYRAG 1 cut(s) 337
SmoI CTYRAG 1 cut(s) 337
Sse9I AATT 4 cut(s) 7, 382, 532, 632
SsiI CCGC 6 cut(s) 78, 87, 220, 306, 453, 585
SspI AATATT 1 cut(s) 424
StyD4I CCNGG 3 cut(s) 158, 224, 266
TaaI ACNGT 2 cut(s) 292, 593
TaiI ACGT 3 cut(s) 155, 198, 549
TaqI TCGA 6 cut(s) 120, 240, 338, 348, 370, 465
TasI AATT 4 cut(s) 7, 382, 532, 632
TauI GCSGC 2 cut(s) 456, 588
TfiI GAWTC 2 cut(s) 367, 439
Tru1I TTAA 1 cut(s) 640
Tru9I TTAA 1 cut(s) 640
TseI GCWGC 2 cut(s) 125, 295
TspDTI ATGAA 1 cut(s) 512
VpaK11BI GGWCC 1 cut(s) 222
XapI RAATTY 2 cut(s) 382, 532
XcmI CCANNNNNNNNNTGG 1 cut(s) 181
XhoI CTCGAG 1 cut(s) 337
XmnI GAANNNNTTC 1 cut(s) 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.