Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010174

Physical Location & Seq

Genomic Coordinates Reverse (-)

59954952 .. 59967431

Gene Structure 12480 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG433000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGAAACTATGTCGTTGGATTTCCTTGTGCCGTCCTTGTGGGAGATCAAGGTTACAGTGGCTGCCTCCATCTATGTGATCTTCGCTTACTGGTTCTTCACGTACACAGGCGGCGGAGATGGCTACTGTGATCGCTCACTTGCTGACAATTCGGGTGAATCTGGGGATGCCATAGAGGAGAAGGATGGCACGTTGAAAGGGGATGCACACAACAATTCTCCATATTTAATCAAGGTTGAGCTGTTAGCTGCTAAGAATCTTATTGGTGCAAACTTAAATGGCACGTCGGATCCATATGCTATCATCACATGTGGAACAGAAAAGCGATTTAGTTCAATGGTCCCTGGTTCAAGAAATCCCATGTGGGGAGAGGAGTTTAATTTTTCTGTTGATGAGCTTCCTGTCCAGATTAATGTGACAATATATGACTGGGATATTATATGGAAAAGCACAGTTCTTGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACAGGTGCTTTGTGGTATACATTAGATAGCCCATCGGGTCAGGTTTGTCTCCATATAAAATCAATAAAACTTCCCGTAACTTCTCCAAGTGGTAGGGTTGTGAATGGTTATGGTGGTGGCCGAAGGACATCTTTAGATAAACAAGAACCCACAGTTGTTCATCAAAAGCCAGGACCCCTTCAAACCATATTTGATCTACTTCCAGATGAGATTGTGGAACATAGTTATTCATGTGCACTTGAGAGGTCGTTCTTATATCATGGCCGTATGTATGTCTCTGCATGGCACATTTGCTTCCACTCTAATGTGTTTTCTAAGCAAATGAAGGTGCTCATACCAGTTGGTGATATTGATGAGATTCGGAGGACTCAACATGCATTCATTAATCCTGCTGTAACAATTATACTCCGCATGGGTGCCGGTGGGCATGGTGTACCTCCTTTGGGGAGTCCTGATGGTAGAGTCAGGTATAAATTTGCATCATTTTGGAACAGGAATCATGCATTCAGAGCTCTTCAGCGTGCAAGAAAGAATTACCATGGAATGCTAGAAGCTGAAAAGAAGGAGAAGGCAGAGTCAGCGTTGCGTGCACATAGCAGTTCTATAAGAGGAAGTAAAAGTCAGGCTATGATTCCTGAAGATATCATCCCCAATACTGGGAAGCGCCAAGCTTTTATCAAGGATGAAGCTTTGAACAGTATATTTAATGATACTTTTCCCTGCACAGCTGAGAATTACTTCAATTTATTGTTGAGTGATAATTCAAATTTTACAAACGAGTACCGTTCAGCACGAAAGGATACTAATCTTGTAATTGGACATTGGCATCCAGCAGATGAATATGATGGTCAAGTAAGAGAAATAACATTCAGGGGTCTTTGTAACAGTCCCATGTGTCCTCCGGACACTGCCATGACAGAGTGGCAGCATGCTGTTTTGTCACCTGACAAGGAAACACTGGTGTTTGAGACAGTACAACAGGCTCATGATGTTCCATTTGGTTCTTACTTTGAGATCCATTGTAGGTGGAAGTTGGAGACTAACGCTGAAAACTCATGTATCATAGATATAAAAGTGGGTGCACATTTTAAGAAATGGTGTCCGATGCAGTCTAAAATAAAGTCGAGCGCTATTAATGAGTACAAGAAAGAGGTTGAGGTGATGCTGGAAGTTGCCCGCTCCTACATTAAGTCAAGTACTTCGGCCGGTGAGACTGACAAAGTCACTTCCTCACCCTCTCAAGAGAGCAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0012505 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 DUF4782 GRAM

Protein Analysis

582

Amino Acids

65.04

Weight (kDa)

6.01

Isoelectric Point (pI)

41.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	77 - 173	3.1e-17	C2 domain
GRAM	PF02893	226 - 292	1.3e-14	GRAM domain
VASt	PF16016	399 - 544	1.6e-30	VAD1 Analog of StAR-related lipid transfer domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59660 AT3G59660
fragaria_vesca	FvH4_3g33330
malus_domestica	MD00G1149500.v1.1
prunus_persica	Prupe.1G207300_v2.0.a1 Prupe.1G207300_v2.0.a1 Prupe.1G207300_v2.0.a1 Prupe.1G207300_v2.0.a1 Prupe.1G207300_v2.0.a1
pyrus_communis	pycom13g26060
rosa_chinensis	RchiOBHm_Chr5g0060731
rosa_laevigata	RLG00000035392
rosa_roxburghii	Rroxscaffold_1G00019990 Rroxscaffold_3G00245380 Rroxscaffold_3G00245390
rosa_rugosa	Rorug05G0333300
rosa_samantha	Rh5AG396200 Rh5BG408300 Rh5CG433000 Rh5DG423400
rosa_wichuraiana	Rw5G037350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	911
AccBSI	CCGCTC	1 cut(s)	1674
AccI	GTMKAC	1 cut(s)	512
AccIII	TCCGGA	1 cut(s)	1396
AciI	CCGC	4 cut(s)	111, 114, 904, 1672
AclWI	GGATC	3 cut(s)	284, 297, 1504
AcoI	YGGCCR	3 cut(s)	613, 757, 1698
AcsI	RAATTY	2 cut(s)	968, 1261
AcuI	CTGAAG	2 cut(s)	995, 1152
AfaI	GTAC	6 cut(s)	104, 930, 1277, 1470, 1637, 1693
AfeI	AGCGCT	1 cut(s)	1624
AfiI	CCNNNNNNNGG	4 cut(s)	365, 938, 1151, 1152
AflIII	ACRYGT	1 cut(s)	308
AgsI	TTSAA	8 cut(s)	196, 336, 351, 482, 677, 1189, 1237, 1260
AjiI	CACGTC	1 cut(s)	285
AjnI	CCWGG	2 cut(s)	343, 664
AluBI	AGCT	9 cut(s)	241, 248, 397, 1007, 1049, 1166, 1184, 1223, 1746
AluI	AGCT	9 cut(s)	241, 248, 397, 1007, 1049, 1166, 1184, 1223, 1746
Alw21I	GWGCWC	5 cut(s)	733, 828, 1009, 1087, 1579
Alw26I	GTCTC	5 cut(s)	548, 775, 1457, 1526, 1700
Alw44I	GTGCAC	3 cut(s)	729, 1083, 1575
AlwI	GGATC	3 cut(s)	284, 297, 1504
AlwNI	CAGNNNCTG	2 cut(s)	62, 470
Aor13HI	TCCGGA	1 cut(s)	1396
Aor51HI	AGCGCT	1 cut(s)	1624
AoxI	GGCC	3 cut(s)	613, 757, 1698
ApaLI	GTGCAC	3 cut(s)	729, 1083, 1575
ApeKI	GCWGC	4 cut(s)	62, 248, 1420, 1743
ApoI	RAATTY	2 cut(s)	968, 1261
AseI	ATTAAT	3 cut(s)	411, 879, 1629
Asp700I	GAANNNNTTC	1 cut(s)	1232
AspLEI	GCGC	2 cut(s)	1161, 1625
AspS9I	GGNCC	2 cut(s)	340, 668
AsuHPI	GGTGA	6 cut(s)	167, 851, 1428, 1666, 1715, 1719
AvaII	GGWCC	2 cut(s)	340, 668
BaeGI	GKGCMC	3 cut(s)	733, 1087, 1579
BaeI	ACNNNNGTAYC	2 cut(s)	1537, 1570
BamHI	GGATCC	1 cut(s)	289
BanI	GGYRCC	1 cut(s)	911
BanII	GRGCYC	1 cut(s)	1009
Bbv12I	GWGCWC	5 cut(s)	733, 828, 1009, 1087, 1579
BbvI	GCAGC	3 cut(s)	49, 235, 1432
BccI	CCATC	6 cut(s)	77, 113, 179, 535, 944, 1334
BceAI	ACGGC	2 cut(s)	16, 744
BciT130I	CCWGG	2 cut(s)	345, 666
BciVI	GTATCC	1 cut(s)	1288
BcoDI	GTCTC	5 cut(s)	548, 775, 1457, 1526, 1700
BfaI	CTAG	1 cut(s)	1043
BfoI	RGCGCY	2 cut(s)	1162, 1626
BfuI	GTATCC	1 cut(s)	1288
BisI	GCNGC	5 cut(s)	63, 112, 249, 1421, 1744
BlsI	GCNGC	5 cut(s)	64, 113, 250, 1422, 1745
BmcAI	AGTACT	1 cut(s)	1693
Bme1390I	CCNGG	2 cut(s)	345, 666
Bme18I	GGWCC	2 cut(s)	340, 668
BmgBI	CACGTC	1 cut(s)	285
BmgT120I	GGNCC	2 cut(s)	340, 668
BmiI	GGNNCC	4 cut(s)	291, 342, 670, 913
BmrFI	CCNGG	2 cut(s)	345, 666
BmrI	ACTGGG	2 cut(s)	439, 1161
BmsI	GCATC	6 cut(s)	157, 193, 983, 1330, 1590, 1647
BmuI	ACTGGG	2 cut(s)	439, 1161
BpuEI	CTTGAG	2 cut(s)	755, 1719
BsaAI	YACGTR	1 cut(s)	102
BsaBI	GATNNNNATC	1 cut(s)	1299
BsaJI	CCNNGG	2 cut(s)	343, 1033
BsaWI	WCCGGW	1 cut(s)	1396
Bsc4I	CCNNNNNNNGG	4 cut(s)	365, 938, 1151, 1152
Bse118I	RCCGGY	2 cut(s)	914, 1700
Bse1I	ACTGG	6 cut(s)	95, 434, 476, 833, 1156, 1458
Bse8I	GATNNNNATC	1 cut(s)	1299
BseAI	TCCGGA	1 cut(s)	1396
BseBI	CCWGG	2 cut(s)	345, 666
BseDI	CCNNGG	2 cut(s)	343, 1033
BseGI	GGATG	6 cut(s)	172, 190, 208, 1140, 1183, 1321
BseJI	GATNNNNATC	1 cut(s)	1299
BseLI	CCNNNNNNNGG	4 cut(s)	365, 938, 1151, 1152
BseMII	CTCAG	1 cut(s)	1215
BseNI	ACTGG	6 cut(s)	95, 434, 476, 833, 1156, 1458
BseRI	GAGGAG	2 cut(s)	191, 386
BseSI	GKGCMC	3 cut(s)	733, 1087, 1579
BseX3I	CGGCCG	1 cut(s)	1698
BseXI	GCAGC	3 cut(s)	49, 235, 1432
BsgI	GTGCAG	1 cut(s)	1201
Bsh1285I	CGRYCG	1 cut(s)	1701
BshFI	GGCC	3 cut(s)	615, 759, 1700
BshNI	GGYRCC	1 cut(s)	911
BsiEI	CGRYCG	1 cut(s)	1701
BsiHKAI	GWGCWC	5 cut(s)	733, 828, 1009, 1087, 1579
BsiSI	CCGG	3 cut(s)	915, 1397, 1701
BslFI	GGGAC	2 cut(s)	326, 1368
BslI	CCNNNNNNNGG	4 cut(s)	365, 938, 1151, 1152
BsmAI	GTCTC	5 cut(s)	548, 775, 1457, 1526, 1700
BsmFI	GGGAC	2 cut(s)	326, 1368
BsmI	GAATGC	3 cut(s)	872, 998, 1044
BsnI	GGCC	3 cut(s)	615, 759, 1700
Bsp1286I	GDGCHC	5 cut(s)	733, 828, 1009, 1087, 1579
Bsp13I	TCCGGA	1 cut(s)	1396
Bsp143I	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
Bsp19I	CCATGG	1 cut(s)	1033
BspACI	CCGC	4 cut(s)	111, 114, 904, 1672
BspANI	GGCC	3 cut(s)	615, 759, 1700
BspCNI	CTCAG	1 cut(s)	1216
BspEI	TCCGGA	1 cut(s)	1396
BspHI	TCATGA	1 cut(s)	1480
BspLI	GGNNCC	4 cut(s)	291, 342, 670, 913
BspPI	GGATC	3 cut(s)	284, 297, 1504
BspQI	GCTCTTC	1 cut(s)	1014
BspT107I	GGYRCC	1 cut(s)	911
BsrBI	CCGCTC	1 cut(s)	1674
BsrFI	RCCGGY	2 cut(s)	914, 1700
BsrI	ACTGG	6 cut(s)	95, 434, 476, 833, 1156, 1458
BssAI	RCCGGY	2 cut(s)	914, 1700
BssECI	CCNNGG	2 cut(s)	343, 1033
BssMI	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
BssNAI	GTATAC	1 cut(s)	513
BssT1I	CCWWGG	1 cut(s)	1033
Bst1107I	GTATAC	1 cut(s)	513
Bst2UI	CCWGG	2 cut(s)	345, 666
Bst4CI	ACNGT	9 cut(s)	58, 128, 454, 472, 649, 1193, 1280, 1382, 1468
Bst6I	CTCTTC	1 cut(s)	1014
BstBAI	YACGTR	1 cut(s)	102
BstC8I	GCNNGC	4 cut(s)	1017, 1083, 1425, 1672
BstDEI	CTNAG	3 cut(s)	252, 810, 1224
BstDSI	CCRYGG	1 cut(s)	1033
BstF5I	GGATG	6 cut(s)	172, 190, 208, 1140, 1183, 1321
BstH2I	RGCGCY	2 cut(s)	1162, 1626
BstHHI	GCGC	2 cut(s)	1161, 1625
BstKTI	GATC	6 cut(s)	48, 81, 133, 292, 691, 1512
BstMAI	GTCTC	5 cut(s)	548, 775, 1457, 1526, 1700
BstMBI	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
BstMCI	CGRYCG	1 cut(s)	1701
BstMWI	GCNNNNNNNGC	4 cut(s)	120, 1004, 1073, 1082
BstNI	CCWGG	2 cut(s)	345, 666
BstNSI	RCATGY	3 cut(s)	312, 872, 1427
BstSCI	CCNGG	2 cut(s)	343, 664
BstSLI	GKGCMC	3 cut(s)	733, 1087, 1579
BstV1I	GCAGC	3 cut(s)	49, 235, 1432
BstX2I	RGATCY	2 cut(s)	289, 1509
BstYI	RGATCY	2 cut(s)	289, 1509
BstZ17I	GTATAC	1 cut(s)	513
BstZI	CGGCCG	1 cut(s)	1698
BsuI	GTATCC	1 cut(s)	1288
BsuRI	GGCC	3 cut(s)	615, 759, 1700
BtgI	CCRYGG	1 cut(s)	1033
BtrI	CACGTC	1 cut(s)	285
BtsCI	GGATG	6 cut(s)	172, 190, 208, 1140, 1183, 1321
BtsI	GCAGTG	1 cut(s)	1401
BtsIMutI	CAGTG	4 cut(s)	63, 471, 1401, 1451
Cac8I	GCNNGC	4 cut(s)	1017, 1083, 1425, 1672
CaiI	CAGNNNCTG	2 cut(s)	62, 470
CciI	TCATGA	1 cut(s)	1480
CfoI	GCGC	2 cut(s)	1161, 1625
Cfr10I	RCCGGY	2 cut(s)	914, 1700
Cfr13I	GGNCC	2 cut(s)	340, 668
Csp6I	GTAC	6 cut(s)	103, 929, 1276, 1469, 1636, 1692
CviQI	GTAC	6 cut(s)	103, 929, 1276, 1469, 1636, 1692
DdeI	CTNAG	3 cut(s)	252, 810, 1224
DpnI	GATC	6 cut(s)	47, 80, 132, 291, 690, 1511
DpnII	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
EaeI	YGGCCR	3 cut(s)	613, 757, 1698
EagI	CGGCCG	1 cut(s)	1698
Eam1104I	CTCTTC	1 cut(s)	1014
EarI	CTCTTC	1 cut(s)	1014
EciI	GGCGGA	1 cut(s)	129
Ecl136II	GAGCTC	1 cut(s)	1007
EclXI	CGGCCG	1 cut(s)	1698
Eco130I	CCWWGG	1 cut(s)	1033
Eco24I	GRGCYC	1 cut(s)	1009
Eco32I	GATATC	1 cut(s)	1138
Eco47I	GGWCC	2 cut(s)	340, 668
Eco47III	AGCGCT	1 cut(s)	1624
Eco52I	CGGCCG	1 cut(s)	1698
Eco53kI	GAGCTC	1 cut(s)	1007
Eco57I	CTGAAG	2 cut(s)	995, 1152
EcoICRI	GAGCTC	1 cut(s)	1007
EcoO109I	RGGNCCY	1 cut(s)	668
EcoRII	CCWGG	2 cut(s)	343, 664
EcoRV	GATATC	1 cut(s)	1138
EcoT14I	CCWWGG	1 cut(s)	1033
EcoT22I	ATGCAT	2 cut(s)	874, 1000
EcoT38I	GRGCYC	1 cut(s)	1009
ErhI	CCWWGG	1 cut(s)	1033
FalI	AAGNNNNNCTT	2 cut(s)	610, 642
FaqI	GGGAC	2 cut(s)	326, 1368
FauI	CCCGC	1 cut(s)	1679
FauNDI	CATATG	1 cut(s)	295
FblI	GTMKAC	1 cut(s)	512
Fnu4HI	GCNGC	5 cut(s)	63, 112, 249, 1421, 1744
FokI	GGATG	6 cut(s)	179, 197, 215, 1127, 1190, 1308
FriOI	GRGCYC	1 cut(s)	1009
Fsp4HI	GCNGC	5 cut(s)	63, 112, 249, 1421, 1744
FspBI	CTAG	1 cut(s)	1043
GlaI	GCGC	2 cut(s)	1160, 1624
GluI	GCNGC	5 cut(s)	63, 112, 249, 1421, 1744
HaeII	RGCGCY	2 cut(s)	1162, 1626
HaeIII	GGCC	3 cut(s)	615, 759, 1700
HapII	CCGG	3 cut(s)	915, 1397, 1701
HhaI	GCGC	2 cut(s)	1161, 1625
Hin6I	GCGC	2 cut(s)	1159, 1623
HinP1I	GCGC	2 cut(s)	1159, 1623
HindIII	AAGCTT	2 cut(s)	1164, 1182
HinfI	GANTC	9 cut(s)	158, 256, 853, 862, 943, 957, 991, 1070, 1126
HpaII	CCGG	3 cut(s)	915, 1397, 1701
HphI	GGTGA	6 cut(s)	167, 851, 1428, 1666, 1715, 1719
Hpy166II	GTNNAC	6 cut(s)	105, 513, 731, 929, 1085, 1577
Hpy188I	TCNGA	4 cut(s)	289, 858, 1004, 1599
Hpy188III	TCNNGA	8 cut(s)	351, 406, 698, 947, 1130, 1397, 1481, 1736
Hpy8I	GTNNAC	6 cut(s)	105, 513, 731, 929, 1085, 1577
Hpy99I	CGWCG	1 cut(s)	289
HpyAV	CCTTC	7 cut(s)	175, 482, 612, 683, 814, 1051, 1057
HpyCH4III	ACNGT	9 cut(s)	58, 128, 454, 472, 649, 1193, 1280, 1382, 1468
HpyCH4IV	ACGT	3 cut(s)	101, 191, 284
HpyF10VI	GCNNNNNNNGC	4 cut(s)	120, 1004, 1073, 1082
HpyF3I	CTNAG	3 cut(s)	252, 810, 1224
HpySE526I	ACGT	3 cut(s)	101, 191, 284
HspAI	GCGC	2 cut(s)	1159, 1623
Kpn2I	TCCGGA	1 cut(s)	1396
Kzo9I	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
LguI	GCTCTTC	1 cut(s)	1014
LmnI	GCTCC	1 cut(s)	1679
Lsp1109I	GCAGC	3 cut(s)	49, 235, 1432
LweI	GCATC	6 cut(s)	157, 193, 983, 1330, 1590, 1647
MaeI	CTAG	1 cut(s)	1043
MaeII	ACGT	3 cut(s)	101, 191, 284
MaeIII	GTNAC	8 cut(s)	52, 415, 466, 571, 889, 1376, 1434, 1717
MalI	GATC	6 cut(s)	47, 80, 132, 291, 690, 1511
MbiI	CCGCTC	1 cut(s)	1674
MboI	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
MboII	GAAGA	4 cut(s)	73, 88, 1001, 1145
MflI	RGATCY	2 cut(s)	289, 1509
MhlI	GDGCHC	5 cut(s)	733, 828, 1009, 1087, 1579
MlyI	GAGTC	4 cut(s)	856, 952, 966, 1079
MmeI	TCCRAC	2 cut(s)	267, 1509
Mph1103I	ATGCAT	2 cut(s)	874, 1000
MroI	TCCGGA	1 cut(s)	1396
MroXI	GAANNNNTTC	1 cut(s)	1232
MseI	TTAA	9 cut(s)	227, 275, 378, 411, 879, 1200, 1584, 1629, 1683
MslI	CAYNNNNRTG	3 cut(s)	74, 798, 1406
MspA1I	CMGCKG	1 cut(s)	1223
MspI	CCGG	3 cut(s)	915, 1397, 1701
MspR9I	CCNGG	2 cut(s)	345, 666
Mva1269I	GAATGC	3 cut(s)	872, 998, 1044
MvaI	CCWGG	2 cut(s)	345, 666
MwoI	GCNNNNNNNGC	4 cut(s)	120, 1004, 1073, 1082
NcoI	CCATGG	1 cut(s)	1033
NdeI	CATATG	1 cut(s)	295
NdeII	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
NlaIV	GGNNCC	4 cut(s)	291, 342, 670, 913
NmuCI	GTSAC	4 cut(s)	415, 466, 1434, 1717
NsiI	ATGCAT	2 cut(s)	874, 1000
NspI	RCATGY	3 cut(s)	312, 872, 1427
PaeI	GCATGC	1 cut(s)	1427
PagI	TCATGA	1 cut(s)	1480
PciI	ACATGT	1 cut(s)	308
PciSI	GCTCTTC	1 cut(s)	1014
PctI	GAATGC	3 cut(s)	872, 998, 1044
PdmI	GAANNNNTTC	1 cut(s)	1232
PfeI	GAWTC	5 cut(s)	158, 256, 853, 991, 1126
PflFI	GACNNNGTC	1 cut(s)	1715
PkrI	GCNGC	5 cut(s)	64, 113, 250, 1422, 1745
PleI	GAGTC	4 cut(s)	856, 951, 965, 1078
PpsI	GAGTC	4 cut(s)	856, 951, 965, 1078
Ppu21I	YACGTR	1 cut(s)	102
PpuMI	RGGWCCY	1 cut(s)	668
PscI	ACATGT	1 cut(s)	308
PshBI	ATTAAT	3 cut(s)	411, 879, 1629
Psp124BI	GAGCTC	1 cut(s)	1009
Psp5II	RGGWCCY	1 cut(s)	668
Psp6I	CCWGG	2 cut(s)	343, 664
PspGI	CCWGG	2 cut(s)	343, 664
PspN4I	GGNNCC	4 cut(s)	291, 342, 670, 913
PspPI	GGNCC	2 cut(s)	340, 668
PspPPI	RGGWCCY	1 cut(s)	668
PstNI	CAGNNNCTG	2 cut(s)	62, 470
PsuI	RGATCY	2 cut(s)	289, 1509
PsyI	GACNNNGTC	1 cut(s)	1715
PvuII	CAGCTG	1 cut(s)	1223
RsaI	GTAC	6 cut(s)	104, 930, 1277, 1470, 1637, 1693
RsaNI	GTAC	6 cut(s)	103, 929, 1276, 1469, 1636, 1692
RseI	CAYNNNNRTG	3 cut(s)	74, 798, 1406
SacI	GAGCTC	1 cut(s)	1009
SapI	GCTCTTC	1 cut(s)	1014
SaqAI	TTAA	9 cut(s)	227, 275, 378, 411, 879, 1200, 1584, 1629, 1683
SatI	GCNGC	5 cut(s)	63, 112, 249, 1421, 1744
Sau3AI	GATC	6 cut(s)	45, 78, 130, 289, 688, 1509
Sau96I	GGNCC	2 cut(s)	340, 668
ScaI	AGTACT	1 cut(s)	1693
SchI	GAGTC	4 cut(s)	856, 952, 966, 1079
ScrFI	CCNGG	2 cut(s)	345, 666
SduI	GDGCHC	5 cut(s)	733, 828, 1009, 1087, 1579
SfaNI	GCATC	6 cut(s)	157, 193, 983, 1330, 1590, 1647
SinI	GGWCC	2 cut(s)	340, 668
SmiMI	CAYNNNNRTG	3 cut(s)	74, 798, 1406
SmlI	CTYRAG	2 cut(s)	734, 1734
SmoI	CTYRAG	2 cut(s)	734, 1734
SphI	GCATGC	1 cut(s)	1427
SsiI	CCGC	4 cut(s)	111, 114, 904, 1672
SspMI	CTAG	1 cut(s)	1043
SstI	GAGCTC	1 cut(s)	1009
StyD4I	CCNGG	2 cut(s)	343, 664
StyI	CCWWGG	1 cut(s)	1033
TaaI	ACNGT	9 cut(s)	58, 128, 454, 472, 649, 1193, 1280, 1382, 1468
TaiI	ACGT	3 cut(s)	104, 194, 287
TaqI	TCGA	1 cut(s)	1619
TatI	WGTACW	3 cut(s)	1468, 1635, 1691
TauI	GCSGC	1 cut(s)	114
TfiI	GAWTC	5 cut(s)	158, 256, 853, 991, 1126
Tru1I	TTAA	9 cut(s)	227, 275, 378, 411, 879, 1200, 1584, 1629, 1683
Tru9I	TTAA	9 cut(s)	227, 275, 378, 411, 879, 1200, 1584, 1629, 1683
TscAI	CASTG	4 cut(s)	63, 471, 1408, 1458
TseFI	GTSAC	4 cut(s)	415, 466, 1434, 1717
TseI	GCWGC	4 cut(s)	62, 248, 1420, 1743
Tsp45I	GTSAC	4 cut(s)	415, 466, 1434, 1717
TspDTI	ATGAA	6 cut(s)	644, 714, 833, 865, 1194, 1347
TspRI	CASTG	4 cut(s)	63, 471, 1408, 1458
Tth111I	GACNNNGTC	1 cut(s)	1715
VneI	GTGCAC	3 cut(s)	729, 1083, 1575
VpaK11BI	GGWCC	2 cut(s)	340, 668
VspI	ATTAAT	3 cut(s)	411, 879, 1629
XapI	RAATTY	2 cut(s)	968, 1261
XceI	RCATGY	3 cut(s)	312, 872, 1427
XmiI	GTMKAC	1 cut(s)	512
XmnI	GAANNNNTTC	1 cut(s)	1232
XspI	CTAG	1 cut(s)	1043
ZrmI	AGTACT	1 cut(s)	1693
Zsp2I	ATGCAT	2 cut(s)	874, 1000

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.