Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0011803

Physical Location & Seq

Genomic Coordinates Forward (+)

62724238 .. 62726984

Gene Structure 2747 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG450200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGACTCTGCTTTATTTCCTCACCCCCTCATTCCCTACATCCTCACTAACTCAAGTTTGCATCGATATTTTGCGGCTCCTCAGAAGCAAAGGTGGTTGAATCCAAGTTGTTGGGCTATTGGGGTTTCTAGAACTGGAGAGGGAAACCTTTCTAATGATATTCCTTTAAAGAAAAGTGAAAATGGGTCTTTGTTGGGTGGCTTGGACGAGTCAGCTTCATCAGCACCAATAATTGGGACATTGGATGCTGAGATTACACCAGAGACCATTGATTTCTTTGTTAGTGATGCCGAGGGTGATCCTGATTCTCCATCGGAGGGCTACTCGTCCATAGAGCAAGCGCTCAATACATTACGCCAAGGAAAGTTTGTGATTGTTGTAGATGATGAAAATGCGGAAGTTGAAGGAAACCTTGTCATGGCAGCATCATTTGCAAATCCTAGAAACATAGCATTCCTAATTAAACACGGATCTGGGATCGTCTCTGTAGGCATGAAGGAGGAGGATCTTGAAAGATTGAAGCTTCCTCTGATGTCACCAGAGACCGAAGACGAAGACTCTTCTGCCCCCACATTCACAATCACAGTGGATGCAAAAATTGGAACATCTACTGGAGTATCAGCTCCAGACAGGGCAAAGACTGTTCTTGCTCTTTCATCTAAGGAGTCAAAGCCGGAAGATTTTAGAAGACCTGGCCATGTGTTTCCCCTCAAGTACCGCAATGGTGGGGTTCTTCGGAGAGCTGGTCACACTGAGGCTTCTGTTGATCTGGTTGTTCTGGCGGGCTTGAGGCCAGTGTCTGTTCTTTCAGCCGTAGTTGATGCAGAAGATGGCTCTATGGCGTCTTTGCCCGATTTAAAAAAACTGTCATTGGACCACAGCATTCCAATTGTCTCAATAACTGATCTGATTAGGTACAGGAGAAAGAGGGAAAAGATAGTTGAAAGAACTGCTCTATCGCGTTTGCCTACAAAATGGGGTCTGTTTCAGGCTTATTGCTACCGCTCAAAGCTAGACGGAACAGAACATGTTGCTGTTGTGAAAGGAAGCATAGGAAATGGAGAAGATGTGCTGGTAAGAGTTCATTCGGAGTGTTTGACAGGTGACATTTTTGGGTCTGGGCGGTGTGATTGTGGCAACCAGTTGGAATTGGCAATGCAGCTAATCGAACAGGCTGGTCGAGGCGCTGTTGTTTACCTTCGAGGTCATGAAGGAAGAGGCATTGGTCTTGGTCACAAACTTCAAGCCTATAATCTTCAAGACCAAGGCCATGACACAGTCCAGGCTAATATAGAACTTGGACTAGCTGTCGATGCTCGCGAATATGGAATTGGTGCACAGATTCTAAGAGACATAGGAGTTCGAACGATGAGGCTGATGACAAACAATCCAGCCAAGTTCAGTGGTCTAAAGGGATATGGTTTGGCTGTGATTGGTAGGGTACCGGTGTTAACACCAATTACAGAGGAAAACAAGAAGTACTTGGAAACAAAAAGAACTAAGATGGGGCATGTTTATGGTTCTGATATTCAAGGATCTTCAGCCGATTTCATCAAACCAAATGTATATAACAAGGACATAGAAAACAAACCTGAAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006766 GO:0006767 GO:0006771 GO:0006807 GO:0008150 GO:0008152 GO:0008686 GO:0009058 GO:0009110 GO:0009231 GO:0009987 GO:0016829 GO:0016830 GO:0017144 GO:0018130 GO:0034641 GO:0042364 GO:0042726 GO:0042727 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00740 ko00790 ko01100 ko01110 map00740 map00790 map01100 map01110

Pfam Domains

Protein Families

DHBP_synthase GTP_cyclohydro2

Protein Analysis

533

Amino Acids

57.85

Weight (kDa)

5.82

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHBP_synthase	PF00926	112 - 306	3.1e-71	3,4-dihydroxy-2-butanone 4-phosphate synthase
GTP_cyclohydro2	PF00925	318 - 482	2.1e-71	GTP cyclohydrolase II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59750 AT5G59750 AT5G59750
fragaria_vesca	FvH4_3g34860 FvH4_3g34860
malus_domestica	MD03G1100600.v1.1
prunus_persica	Prupe.6G085600_v2.0.a1 Prupe.6G085600_v2.0.a1
pyrus_communis	pycom03g08270
rosa_chinensis	RchiOBHm_Chr5g0062711
rosa_laevigata	RLG00000035574
rosa_multiflora	Rmu_ssc0000472.1_g000019
rosa_roxburghii	Rroxscaffold_1G00017910
rosa_rugosa	Rorug05G0351100
rosa_samantha	Rh5AG412100 Rh5BG426100 Rh5CG450200 Rh5DG440100
rosa_wichuraiana	Rw5G038740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1441
AccB1I	GGYRCC	1 cut(s)	1441
AccB7I	CCANNNNNTGG	1 cut(s)	233
AccBSI	CCGCTC	1 cut(s)	1005
AccII	CGCG	2 cut(s)	961, 1320
AciI	CCGC	6 cut(s)	74, 395, 718, 782, 1003, 1123
AclWI	GGATC	5 cut(s)	293, 478, 485, 513, 1543
AcoI	YGGCCR	1 cut(s)	694
AcuI	CTGAAG	1 cut(s)	1524
AcyI	GRCGYC	1 cut(s)	842
AfaI	GTAC	4 cut(s)	716, 917, 1443, 1481
AfeI	AGCGCT	1 cut(s)	342
AfiI	CCNNNNNNNGG	3 cut(s)	233, 317, 418
AflIII	ACRYGT	1 cut(s)	1027
AgeI	ACCGGT	1 cut(s)	1444
AgsI	TTSAA	8 cut(s)	100, 404, 512, 520, 944, 1244, 1259, 1532
AhdI	GACNNNNNGTC	1 cut(s)	1307
AjnI	CCWGG	2 cut(s)	691, 1281
AjuI	GAANNNNNNNTTGG	2 cut(s)	1314, 1346
AluBI	AGCT	8 cut(s)	215, 523, 623, 743, 1012, 1162, 1307, 1599
AluI	AGCT	8 cut(s)	215, 523, 623, 743, 1012, 1162, 1307, 1599
Alw21I	GWGCWC	1 cut(s)	1339
Alw26I	GTCTC	5 cut(s)	257, 487, 536, 898, 1344
Alw44I	GTGCAC	1 cut(s)	1335
AlwI	GGATC	5 cut(s)	293, 478, 485, 513, 1543
AlwNI	CAGNNNCTG	1 cut(s)	800
Aor51HI	AGCGCT	1 cut(s)	342
AoxI	GGCC	3 cut(s)	694, 791, 1267
ApaLI	GTGCAC	1 cut(s)	1335
ApeKI	GCWGC	2 cut(s)	422, 1159
AsiGI	ACCGGT	1 cut(s)	1444
Asp700I	GAANNNNTTC	1 cut(s)	148
Asp718I	GGTACC	1 cut(s)	1441
AspLEI	GCGC	2 cut(s)	343, 1187
AspS9I	GGNCC	1 cut(s)	874
AsuHPI	GGTGA	4 cut(s)	14, 308, 528, 1115
AsuII	TTCGAA	1 cut(s)	1363
AvaII	GGWCC	1 cut(s)	874
BaeGI	GKGCMC	1 cut(s)	1339
BaeI	ACNNNNGTAYC	4 cut(s)	600, 633, 1433, 1466
BalI	TGGCCA	1 cut(s)	696
BanI	GGYRCC	1 cut(s)	1441
BbsI	GAAGAC	3 cut(s)	555, 561, 694
Bbv12I	GWGCWC	1 cut(s)	1339
BbvI	GCAGC	2 cut(s)	434, 1171
BccI	CCATC	3 cut(s)	319, 824, 1498
BceAI	ACGGC	1 cut(s)	797
BciT130I	CCWGG	2 cut(s)	693, 1283
BcoDI	GTCTC	5 cut(s)	257, 487, 536, 898, 1344
BfaI	CTAG	4 cut(s)	129, 441, 1013, 1304
BfmI	CTRYAG	1 cut(s)	486
BfoI	RGCGCY	2 cut(s)	344, 1188
BisI	GCNGC	3 cut(s)	75, 423, 1160
BlsI	GCNGC	3 cut(s)	76, 424, 1161
BmcAI	AGTACT	1 cut(s)	1481
Bme1390I	CCNGG	2 cut(s)	693, 1283
Bme18I	GGWCC	1 cut(s)	874
BmeRI	GACNNNNNGTC	1 cut(s)	1307
BmgT120I	GGNCC	1 cut(s)	874
BmiI	GGNNCC	2 cut(s)	78, 1443
BmrFI	CCNGG	2 cut(s)	693, 1283
BmsI	GCATC	7 cut(s)	70, 235, 277, 434, 580, 811, 1303
BpiI	GAAGAC	3 cut(s)	555, 561, 694
BplI	GAGNNNNNCTC	2 cut(s)	308, 340
BpmI	CTGGAG	3 cut(s)	156, 609, 633
Bpu14I	TTCGAA	1 cut(s)	1363
BpuEI	CTTGAG	3 cut(s)	37, 695, 808
Bsa29I	ATCGAT	1 cut(s)	64
BsaHI	GRCGYC	1 cut(s)	842
BsaI	GGTCTC	2 cut(s)	257, 536
BsaJI	CCNNGG	3 cut(s)	291, 358, 1264
BsaWI	WCCGGW	1 cut(s)	1444
BsaXI	ACNNNNNCTCC	4 cut(s)	730, 760, 1053, 1083
Bsc4I	CCNNNNNNNGG	3 cut(s)	233, 317, 418
Bse118I	RCCGGY	1 cut(s)	1444
Bse1I	ACTGG	4 cut(s)	139, 616, 794, 1141
Bse3DI	GCAATG	2 cut(s)	727, 1161
BseBI	CCWGG	2 cut(s)	693, 1283
BseCI	ATCGAT	1 cut(s)	64
BseDI	CCNNGG	3 cut(s)	291, 358, 1264
BseGI	GGATG	3 cut(s)	39, 250, 595
BseLI	CCNNNNNNNGG	3 cut(s)	233, 317, 418
BseMI	GCAATG	2 cut(s)	727, 1161
BseMII	CTCAG	3 cut(s)	95, 240, 744
BseNI	ACTGG	4 cut(s)	139, 616, 794, 1141
BseRI	GAGGAG	2 cut(s)	69, 515
BseSI	GKGCMC	1 cut(s)	1339
BseXI	GCAGC	2 cut(s)	434, 1171
Bsh1236I	CGCG	2 cut(s)	961, 1320
BshFI	GGCC	3 cut(s)	696, 793, 1269
BshNI	GGYRCC	1 cut(s)	1441
BshTI	ACCGGT	1 cut(s)	1444
BshVI	ATCGAT	1 cut(s)	64
BsiHKAI	GWGCWC	1 cut(s)	1339
BsiSI	CCGG	2 cut(s)	674, 1445
BslFI	GGGAC	1 cut(s)	250
BslI	CCNNNNNNNGG	3 cut(s)	233, 317, 418
BsmAI	GTCTC	5 cut(s)	257, 487, 536, 898, 1344
BsmBI	CGTCTC	1 cut(s)	487
BsmFI	GGGAC	1 cut(s)	250
BsmI	GAATGC	2 cut(s)	452, 882
BsnI	GGCC	3 cut(s)	696, 793, 1269
Bso31I	GGTCTC	2 cut(s)	257, 536
Bsp119I	TTCGAA	1 cut(s)	1363
Bsp1286I	GDGCHC	1 cut(s)	1339
Bsp143I	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
Bsp68I	TCGCGA	1 cut(s)	1320
BspACI	CCGC	6 cut(s)	74, 395, 718, 782, 1003, 1123
BspANI	GGCC	3 cut(s)	696, 793, 1269
BspCNI	CTCAG	3 cut(s)	94, 241, 745
BspDI	ATCGAT	1 cut(s)	64
BspFNI	CGCG	2 cut(s)	961, 1320
BspHI	TCATGA	1 cut(s)	1207
BspLI	GGNNCC	2 cut(s)	78, 1443
BspPI	GGATC	5 cut(s)	293, 478, 485, 513, 1543
BspT104I	TTCGAA	1 cut(s)	1363
BspT107I	GGYRCC	1 cut(s)	1441
BspTNI	GGTCTC	2 cut(s)	257, 536
BsrBI	CCGCTC	1 cut(s)	1005
BsrDI	GCAATG	2 cut(s)	727, 1161
BsrFI	RCCGGY	1 cut(s)	1444
BsrI	ACTGG	4 cut(s)	139, 616, 794, 1141
BssAI	RCCGGY	1 cut(s)	1444
BssECI	CCNNGG	3 cut(s)	291, 358, 1264
BssMI	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
BssNI	GRCGYC	1 cut(s)	842
BssT1I	CCWWGG	2 cut(s)	358, 1264
Bst2UI	CCWGG	2 cut(s)	693, 1283
Bst4CI	ACNGT	4 cut(s)	586, 643, 867, 1279
Bst6I	CTCTTC	2 cut(s)	565, 1210
BstACI	GRCGYC	1 cut(s)	842
BstAPI	GCANNNNNTGC	1 cut(s)	431
BstBI	TTCGAA	1 cut(s)	1363
BstC8I	GCNNGC	3 cut(s)	339, 784, 1318
BstDEI	CTNAG	6 cut(s)	81, 249, 660, 753, 1346, 1500
BstF5I	GGATG	3 cut(s)	39, 250, 595
BstFNI	CGCG	2 cut(s)	961, 1320
BstH2I	RGCGCY	2 cut(s)	344, 1188
BstHHI	GCGC	2 cut(s)	343, 1187
BstKTI	GATC	7 cut(s)	301, 473, 480, 508, 769, 907, 1538
BstMAI	GTCTC	5 cut(s)	257, 487, 536, 898, 1344
BstMBI	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
BstMWI	GCNNNNNNNGC	3 cut(s)	221, 431, 1313
BstNI	CCWGG	2 cut(s)	693, 1283
BstNSI	RCATGY	2 cut(s)	1031, 1514
BstSCI	CCNGG	2 cut(s)	691, 1281
BstSFI	CTRYAG	1 cut(s)	486
BstSLI	GKGCMC	1 cut(s)	1339
BstUI	CGCG	2 cut(s)	961, 1320
BstV1I	GCAGC	2 cut(s)	434, 1171
BstV2I	GAAGAC	3 cut(s)	555, 561, 694
BstX2I	RGATCY	3 cut(s)	470, 505, 1535
BstXI	CCANNNNNNTGG	1 cut(s)	111
BstYI	RGATCY	3 cut(s)	470, 505, 1535
Bsu15I	ATCGAT	1 cut(s)	64
BsuRI	GGCC	3 cut(s)	696, 793, 1269
BsuTUI	ATCGAT	1 cut(s)	64
BtsCI	GGATG	3 cut(s)	39, 250, 595
BtsIMutI	CAGTG	4 cut(s)	591, 750, 801, 1408
BtuMI	TCGCGA	1 cut(s)	1320
Cac8I	GCNNGC	3 cut(s)	339, 784, 1318
CaiI	CAGNNNCTG	1 cut(s)	800
CciI	TCATGA	1 cut(s)	1207
CfoI	GCGC	2 cut(s)	343, 1187
Cfr10I	RCCGGY	1 cut(s)	1444
Cfr13I	GGNCC	1 cut(s)	874
ClaI	ATCGAT	1 cut(s)	64
CseI	GACGC	1 cut(s)	831
Csp6I	GTAC	4 cut(s)	715, 916, 1442, 1480
CspAI	ACCGGT	1 cut(s)	1444
CspCI	CAANNNNNGTGG	4 cut(s)	567, 602, 1384, 1419
CviAII	CATG	7 cut(s)	418, 493, 698, 1028, 1208, 1271, 1511
CviQI	GTAC	4 cut(s)	715, 916, 1442, 1480
DdeI	CTNAG	6 cut(s)	81, 249, 660, 753, 1346, 1500
DpnI	GATC	7 cut(s)	300, 472, 479, 507, 768, 906, 1537
DpnII	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
DraI	TTTAAA	2 cut(s)	168, 858
DriI	GACNNNNNGTC	1 cut(s)	1307
EaeI	YGGCCR	1 cut(s)	694
Eam1104I	CTCTTC	2 cut(s)	565, 1210
Eam1105I	GACNNNNNGTC	1 cut(s)	1307
EarI	CTCTTC	2 cut(s)	565, 1210
Eco130I	CCWWGG	2 cut(s)	358, 1264
Eco31I	GGTCTC	2 cut(s)	257, 536
Eco47I	GGWCC	1 cut(s)	874
Eco47III	AGCGCT	1 cut(s)	342
Eco57I	CTGAAG	1 cut(s)	1524
EcoRII	CCWGG	2 cut(s)	691, 1281
EcoT14I	CCWWGG	2 cut(s)	358, 1264
ErhI	CCWWGG	2 cut(s)	358, 1264
Esp3I	CGTCTC	1 cut(s)	487
FaeI	CATG	7 cut(s)	421, 496, 701, 1031, 1211, 1274, 1514
FalI	AAGNNNNNCTT	4 cut(s)	396, 428, 1466, 1498
FaqI	GGGAC	1 cut(s)	250
FatI	CATG	7 cut(s)	417, 492, 697, 1027, 1207, 1270, 1510
FauI	CCCGC	1 cut(s)	775
Fnu4HI	GCNGC	3 cut(s)	75, 423, 1160
FokI	GGATG	3 cut(s)	26, 257, 602
Fsp4HI	GCNGC	3 cut(s)	75, 423, 1160
FspBI	CTAG	4 cut(s)	129, 441, 1013, 1304
GlaI	GCGC	2 cut(s)	342, 1186
GluI	GCNGC	3 cut(s)	75, 423, 1160
GsuI	CTGGAG	3 cut(s)	156, 609, 633
HaeII	RGCGCY	2 cut(s)	344, 1188
HaeIII	GGCC	3 cut(s)	696, 793, 1269
HapII	CCGG	2 cut(s)	674, 1445
HgaI	GACGC	1 cut(s)	831
HhaI	GCGC	2 cut(s)	343, 1187
Hin1I	GRCGYC	1 cut(s)	842
Hin1II	CATG	7 cut(s)	421, 496, 701, 1031, 1211, 1274, 1514
Hin6I	GCGC	2 cut(s)	341, 1185
HinP1I	GCGC	2 cut(s)	341, 1185
HincII	GTYRAC	1 cut(s)	1452
HindII	GTYRAC	1 cut(s)	1452
HindIII	AAGCTT	1 cut(s)	521
HinfI	GANTC	7 cut(s)	5, 100, 209, 305, 557, 665, 1342
HpaI	GTTAAC	1 cut(s)	1452
HpaII	CCGG	2 cut(s)	674, 1445
HphI	GGTGA	4 cut(s)	14, 308, 528, 1115
Hpy166II	GTNNAC	3 cut(s)	1195, 1337, 1452
Hpy188I	TCNGA	7 cut(s)	84, 316, 531, 738, 909, 1090, 1525
Hpy188III	TCNNGA	7 cut(s)	129, 302, 509, 626, 1208, 1259, 1319
Hpy8I	GTNNAC	3 cut(s)	1195, 1337, 1452
HpyAV	CCTTC	4 cut(s)	398, 490, 1205, 1208
HpyCH4III	ACNGT	4 cut(s)	586, 643, 867, 1279
HpyCH4V	TGCA	6 cut(s)	61, 434, 593, 824, 1159, 1337
HpyF10VI	GCNNNNNNNGC	3 cut(s)	221, 431, 1313
HpyF3I	CTNAG	6 cut(s)	81, 249, 660, 753, 1346, 1500
Hsp92I	GRCGYC	1 cut(s)	842
Hsp92II	CATG	7 cut(s)	421, 496, 701, 1031, 1211, 1274, 1514
HspAI	GCGC	2 cut(s)	341, 1185
KpnI	GGTACC	1 cut(s)	1445
KspAI	GTTAAC	1 cut(s)	1452
Kzo9I	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
LmnI	GCTCC	2 cut(s)	82, 628
Lsp1109I	GCAGC	2 cut(s)	434, 1171
LweI	GCATC	7 cut(s)	70, 235, 277, 434, 580, 811, 1303
MaeI	CTAG	4 cut(s)	129, 441, 1013, 1304
MaeIII	GTNAC	4 cut(s)	534, 746, 1103, 1232
MalI	GATC	7 cut(s)	300, 472, 479, 507, 768, 906, 1537
MbiI	CCGCTC	1 cut(s)	1005
MboI	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
MfeI	CAATTG	1 cut(s)	888
MflI	RGATCY	3 cut(s)	470, 505, 1535
MhlI	GDGCHC	1 cut(s)	1339
MlsI	TGGCCA	1 cut(s)	696
MluCI	AATT	7 cut(s)	231, 459, 597, 888, 1148, 1329, 1458
MluNI	TGGCCA	1 cut(s)	696
MlyI	GAGTC	3 cut(s)	218, 551, 674
MmeI	TCCRAC	1 cut(s)	1125
Mox20I	TGGCCA	1 cut(s)	696
MroXI	GAANNNNTTC	1 cut(s)	148
MscI	TGGCCA	1 cut(s)	696
MseI	TTAA	4 cut(s)	167, 462, 857, 1451
MslI	CAYNNNNRTG	1 cut(s)	1515
Msp20I	TGGCCA	1 cut(s)	696
MspI	CCGG	2 cut(s)	674, 1445
MspR9I	CCNGG	2 cut(s)	693, 1283
MunI	CAATTG	1 cut(s)	888
Mva1269I	GAATGC	2 cut(s)	452, 882
MvaI	CCWGG	2 cut(s)	693, 1283
MvnI	CGCG	2 cut(s)	961, 1320
MwoI	GCNNNNNNNGC	3 cut(s)	221, 431, 1313
NdeII	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
NlaIII	CATG	7 cut(s)	421, 496, 701, 1031, 1211, 1274, 1514
NlaIV	GGNNCC	2 cut(s)	78, 1443
NmeAIII	GCCGAG	1 cut(s)	316
NmuCI	GTSAC	4 cut(s)	534, 746, 1103, 1232
NruI	TCGCGA	1 cut(s)	1320
NspI	RCATGY	2 cut(s)	1031, 1514
NspV	TTCGAA	1 cut(s)	1363
PagI	TCATGA	1 cut(s)	1207
PciI	ACATGT	1 cut(s)	1027
PcsI	WCGNNNNNNNCGW	1 cut(s)	1317
PctI	GAATGC	2 cut(s)	452, 882
PdmI	GAANNNNTTC	1 cut(s)	148
PfeI	GAWTC	3 cut(s)	100, 305, 1342
PflFI	GACNNNGTC	1 cut(s)	1277
PflMI	CCANNNNNTGG	1 cut(s)	233
PinAI	ACCGGT	1 cut(s)	1444
PkrI	GCNGC	3 cut(s)	76, 424, 1161
PleI	GAGTC	3 cut(s)	217, 551, 673
PpsI	GAGTC	3 cut(s)	217, 551, 673
PscI	ACATGT	1 cut(s)	1027
Psp6I	CCWGG	2 cut(s)	691, 1281
PspGI	CCWGG	2 cut(s)	691, 1281
PspN4I	GGNNCC	2 cut(s)	78, 1443
PspPI	GGNCC	1 cut(s)	874
PstNI	CAGNNNCTG	1 cut(s)	800
PsuI	RGATCY	3 cut(s)	470, 505, 1535
PsyI	GACNNNGTC	1 cut(s)	1277
RruI	TCGCGA	1 cut(s)	1320
RsaI	GTAC	4 cut(s)	716, 917, 1443, 1481
RsaNI	GTAC	4 cut(s)	715, 916, 1442, 1480
RseI	CAYNNNNRTG	1 cut(s)	1515
SaqAI	TTAA	4 cut(s)	167, 462, 857, 1451
SatI	GCNGC	3 cut(s)	75, 423, 1160
Sau3AI	GATC	7 cut(s)	298, 470, 477, 505, 766, 904, 1535
Sau96I	GGNCC	1 cut(s)	874
ScaI	AGTACT	1 cut(s)	1481
SchI	GAGTC	3 cut(s)	218, 551, 674
ScrFI	CCNGG	2 cut(s)	693, 1283
SduI	GDGCHC	1 cut(s)	1339
SfaNI	GCATC	7 cut(s)	70, 235, 277, 434, 580, 811, 1303
SfcI	CTRYAG	1 cut(s)	486
SfuI	TTCGAA	1 cut(s)	1363
SinI	GGWCC	1 cut(s)	874
SmiMI	CAYNNNNRTG	1 cut(s)	1515
SmlI	CTYRAG	3 cut(s)	52, 710, 787
SmoI	CTYRAG	3 cut(s)	52, 710, 787
Sse9I	AATT	7 cut(s)	231, 459, 597, 888, 1148, 1329, 1458
SsiI	CCGC	6 cut(s)	74, 395, 718, 782, 1003, 1123
SspMI	CTAG	4 cut(s)	129, 441, 1013, 1304
StyD4I	CCNGG	2 cut(s)	691, 1281
StyI	CCWWGG	2 cut(s)	358, 1264
TaaI	ACNGT	4 cut(s)	586, 643, 867, 1279
TaqI	TCGA	6 cut(s)	64, 1167, 1180, 1201, 1311, 1363
TaqII	GACCGA	1 cut(s)	560
TasI	AATT	7 cut(s)	231, 459, 597, 888, 1148, 1329, 1458
TatI	WGTACW	1 cut(s)	1479
TauI	GCSGC	1 cut(s)	77
TfiI	GAWTC	3 cut(s)	100, 305, 1342
Tru1I	TTAA	4 cut(s)	167, 462, 857, 1451
Tru9I	TTAA	4 cut(s)	167, 462, 857, 1451
TscAI	CASTG	4 cut(s)	591, 757, 801, 1408
TseFI	GTSAC	4 cut(s)	534, 746, 1103, 1232
TseI	GCWGC	2 cut(s)	422, 1159
Tsp45I	GTSAC	4 cut(s)	534, 746, 1103, 1232
TspDTI	ATGAA	7 cut(s)	207, 402, 509, 645, 1073, 1224, 1540
TspGWI	ACGGA	2 cut(s)	483, 1032
TspRI	CASTG	4 cut(s)	591, 757, 801, 1408
Tth111I	GACNNNGTC	1 cut(s)	1277
Van91I	CCANNNNNTGG	1 cut(s)	233
VneI	GTGCAC	1 cut(s)	1335
VpaK11BI	GGWCC	1 cut(s)	874
XbaI	TCTAGA	1 cut(s)	128
XceI	RCATGY	2 cut(s)	1031, 1514
XmnI	GAANNNNTTC	1 cut(s)	148
XspI	CTAG	4 cut(s)	129, 441, 1013, 1304
ZrmI	AGTACT	1 cut(s)	1481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.