Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0017931

Physical Location & Seq

Genomic Coordinates Reverse (-)

15188781 .. 15190914

Gene Structure 2134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG149600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGTCTCCACAGACTCCCACTTGAGTTCATTACAACTACCCGCACCATACCCAGAACGCAGCGATAGCGAAGAGAGACAGTGTAAGCGATTGAAACCAGATCAAGGTAGTTCATATACCCACAGATCAGTACCATCTCAGCTGCGTCCGTCATATGAATCTTTTCAAACTCCCAAGTCTTATGACACATCTAAGCTCCCCTCTGGGTGGTTGGATTGCTCATCGTTTGGTGAAGAGCTAGATTGCATGATACCTTCTAAAGTGCCACTAGGTGAATCCTACAATGTCTTTGTTCCTCATGCTAAGAGATACTCATTCAAGCAAGTGATTGAGGCACAGAGATTTCGGCGAAGAAAACTCGGTTTGGTTATCGATTTGACCAACACAACTCGTTACTATCGGACGTGTGATTTGGTGAAAATGGGTATCAAGCATGTCAGGATTCCATGCAATGGCCGGAATTCTGTACCGGACAACTTTTCGGTAAATCGTTTCGTATACGAGGTTATGCGATTCAAAGAGTACTACCCAGAGAAGTATATCCTTGTGCATTGTACACATGGACACAATCGCACAGGGTACATGATAATACATTACTTGATGCGCACGCAGCCAATGAGGACAGTCACTCAAGCAATAAAAGATTTTGCTCAAGCGCGTCCTCCGGGAATATATAAACCTGACTACATCAATGCATTGTACTCATTCTATCATGAAATGAAGCCTGTGGAATTCGTTTGCCCACCTTCTCCTCAGTGGAAGAGATCTTCGGAATTTGTGCCAGACGACAATGATCAAATTTTGAAAAATAGTCATCAGGATAGGGATACAGATGGTGTAGTAATGACTAATGATGATATCCTGGGTGACGATATACCTGATGGCCAGCAAGAGGAACTGCGGAGGTTGTGCTACAAACTTCTTAAGGCCTTTCCCAGGGTAAGAGGAAGATGGCAATTCCCAGGGTCACACCCAGTTTCTCTTAACTGGGAGAATCTACAGTTGTTGAGGCAACAGTCTTACTATGCCACTTGGAAAGCTGATGGAACCCGTTATATGATGTTAATAACTATACATGGATGTTACTTGATTGATAGAAGCTTCAATTTTAGGAGGGTTCAAATGAGGTTTCCCCGCAAACACTTAAATGGTTCTACTGAGAAGAGTACTCACCACTGCACGTTACTAGACGGGGAGATGGTGATCGATACTCAGCACCTGCCAGGTCCACAGAAGAAGCAGACCCGAAGATACCTTGTTTATGATATGATGGCACTCAACAACGGTTCTGTGGTAGAGTGGCCTTTTCAGGAGCGGTCGAAGAAGATTGAGGAGCAAGTAATTGAGGCTCGGACTAATGACCAGCGCCGAGTTTACGAAAGTAGGAGCAATAATCCTGACTACAGATATGACTTGGAACCATTCAGGGTGAGGATGAAGGGCTTTTGGCCACTCTCTAAGGTGAAGAAGATTTTGAAGGAGTTCATCCCAAAGCTTTCACATGATGCAGATGGCGTGATCTTTCAGGGTATGGACGATCCTTATGTTATCAGAAAACATGAACGCCTTGTGAAGTGGAAATACCCGGAAATGAACTCGGTTGATTTTCTCTTCGAGGTAGGTGGTGATGGTCGGCAACTGCTTTATCTGTATGCATATGGAGAAAAACAACTAATGAAAGGAGAGAGGGTTGCATTTAAGGATAGTTCGGAACACTACTCTTTTTATTCGGGAAAAATAATAGAGTGTTTTCGGGATTCTGAGAAAAAAGAATGGGTCTACATGCGGAGCAGGACAGATAAATCGACTCCAAATGATGTAGAGACCTACAAAAAGGTAAAGAAAAGCATAGAGGACAATATCACGGAGGACGTCTTACTGAAGGAGATAGATAACATCATTCTTCTGCCTATGTATGTTGAGCAGCATGCAAATTCAGCACGGTTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004484 GO:0004651 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008192 GO:0009452 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016311 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019222 GO:0034641 GO:0036260 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0050355 GO:0050789 GO:0060255 GO:0065007 GO:0070568 GO:0071704 GO:0090304 GO:0098501 GO:0098507 GO:0098518 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

650

Amino Acids

76.76

Weight (kDa)

9.07

Isoelectric Point (pI)

52.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	116 - 237	1e-10	Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme	PF01331	324 - 527	5.2e-63	mRNA capping enzyme, catalytic domain
mRNA_cap_C	PF03919	563 - 627	1.4e-16	mRNA capping enzyme, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017931)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01290
fragaria_vesca	FvH4_3g12521
rosa_chinensis	RchiOBHm_Chr5g0020531
rosa_laevigata	RLG00000032536
rosa_multiflora	Rmu_sc0009745.1_g000011 Rmu_sc0010439.1_g000007
rosa_rugosa	Rorug05G0060300
rosa_samantha	Rh5BG150300 Rh5CG161700 Rh5DG149600
rosa_wichuraiana	Rw5G013350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1227
AatII	GACGTC	1 cut(s)	1875
Acc16I	TGCGCA	1 cut(s)	605
Acc36I	ACCTGC	1 cut(s)	1227
AccB7I	CCANNNNNTGG	1 cut(s)	452
AccBSI	CCGCTC	1 cut(s)	1315
AccI	GTMKAC	2 cut(s)	498, 1779
AccII	CGCG	1 cut(s)	658
AciI	CCGC	5 cut(s)	42, 901, 1135, 1315, 1786
AclWI	GGATC	1 cut(s)	1532
AcoI	YGGCCR	3 cut(s)	454, 883, 1448
AcsI	RAATTY	5 cut(s)	460, 731, 773, 798, 1933
AcuI	CTGAAG	1 cut(s)	1901
AcyI	GRCGYC	1 cut(s)	1872
AdeI	CACNNNGTG	1 cut(s)	272
AfaI	GTAC	7 cut(s)	132, 468, 524, 556, 581, 701, 1168
AfiI	CCNNNNNNNGG	5 cut(s)	104, 207, 452, 892, 936
AflII	CTTAAG	1 cut(s)	923
AflIII	ACRYGT	1 cut(s)	404
AgsI	TTSAA	8 cut(s)	94, 167, 319, 517, 805, 1105, 1121, 1477
AjiI	CACGTC	1 cut(s)	405
AjnI	CCWGG	4 cut(s)	861, 935, 961, 1222
AluBI	AGCT	6 cut(s)	142, 196, 238, 1040, 1101, 1495
AluI	AGCT	6 cut(s)	142, 196, 238, 1040, 1101, 1495
Alw26I	GTCTC	3 cut(s)	10, 70, 1817
AlwI	GGATC	1 cut(s)	1532
AlwNI	CAGNNNCTG	1 cut(s)	1219
AoxI	GGCC	5 cut(s)	454, 883, 927, 1301, 1448
ApeKI	GCWGC	4 cut(s)	60, 142, 610, 1924
ApoI	RAATTY	5 cut(s)	460, 731, 773, 798, 1933
ArsI	GACNNNNNNTTYG	2 cut(s)	394, 426
Asp700I	GAANNNNTTC	2 cut(s)	162, 1481
AspLEI	GCGC	3 cut(s)	606, 658, 1368
AspS9I	GGNCC	1 cut(s)	1226
AsuC2I	CCSGG	2 cut(s)	666, 1586
AsuHPI	GGTGA	9 cut(s)	242, 284, 427, 878, 1163, 1213, 1441, 1474, 1637
AvaII	GGWCC	1 cut(s)	1226
BalI	TGGCCA	2 cut(s)	885, 1450
BarI	GAAGNNNNNNTAC	2 cut(s)	1565, 1597
BbvI	GCAGC	4 cut(s)	72, 129, 622, 1936
BccI	CCATC	9 cut(s)	142, 827, 875, 945, 1037, 1192, 1264, 1505, 1622
BciT130I	CCWGG	4 cut(s)	863, 937, 963, 1224
BciVI	GTATCC	1 cut(s)	820
BclI	TGATCA	1 cut(s)	793
BcnI	CCSGG	2 cut(s)	666, 1586
BcoDI	GTCTC	3 cut(s)	10, 70, 1817
BfaI	CTAG	3 cut(s)	239, 269, 1187
BfmI	CTRYAG	2 cut(s)	998, 1402
BfoI	RGCGCY	1 cut(s)	1369
BfrI	CTTAAG	1 cut(s)	923
BfuAI	ACCTGC	1 cut(s)	1227
BfuI	GTATCC	1 cut(s)	820
BglII	AGATCT	1 cut(s)	764
BisI	GCNGC	4 cut(s)	61, 143, 611, 1925
BlsI	GCNGC	4 cut(s)	62, 144, 612, 1926
BmcAI	AGTACT	2 cut(s)	524, 1168
Bme1390I	CCNGG	6 cut(s)	666, 863, 937, 963, 1224, 1586
Bme18I	GGWCC	1 cut(s)	1226
BmgBI	CACGTC	1 cut(s)	405
BmgT120I	GGNCC	1 cut(s)	1226
BmiI	GGNNCC	2 cut(s)	1048, 1419
BmrFI	CCNGG	6 cut(s)	666, 863, 937, 963, 1224, 1586
BmrI	ACTGGG	2 cut(s)	968, 997
BmsI	GCATC	2 cut(s)	591, 1495
BmuI	ACTGGG	2 cut(s)	968, 997
BpuEI	CTTGAG	3 cut(s)	43, 615, 636
BpuMI	CCSGG	2 cut(s)	666, 1586
Bsa29I	ATCGAT	2 cut(s)	372, 1206
BsaBI	GATNNNNATC	1 cut(s)	1202
BsaHI	GRCGYC	1 cut(s)	1872
BsaI	GGTCTC	2 cut(s)	10, 1817
BsaJI	CCNNGG	5 cut(s)	862, 935, 936, 961, 962
BsaWI	WCCGGW	1 cut(s)	469
BsaXI	ACNNNNNCTCC	2 cut(s)	1674, 1704
Bsc4I	CCNNNNNNNGG	5 cut(s)	104, 207, 452, 892, 936
Bse1I	ACTGG	2 cut(s)	974, 992
Bse3DI	GCAATG	1 cut(s)	457
Bse8I	GATNNNNATC	1 cut(s)	1202
BseBI	CCWGG	4 cut(s)	863, 937, 963, 1224
BseCI	ATCGAT	2 cut(s)	372, 1206
BseDI	CCNNGG	5 cut(s)	862, 935, 936, 961, 962
BseGI	GGATG	3 cut(s)	1085, 1440, 1485
BseJI	GATNNNNATC	1 cut(s)	1202
BseLI	CCNNNNNNNGG	5 cut(s)	104, 207, 452, 892, 936
BseMI	GCAATG	1 cut(s)	457
BseMII	CTCAG	5 cut(s)	152, 767, 1149, 1226, 1752
BseNI	ACTGG	2 cut(s)	974, 992
BseRI	GAGGAG	2 cut(s)	741, 1346
BseXI	GCAGC	4 cut(s)	72, 129, 622, 1936
BsgI	GTGCAG	1 cut(s)	1162
Bsh1236I	CGCG	1 cut(s)	658
Bsh1285I	CGRYCG	1 cut(s)	1319
BshFI	GGCC	5 cut(s)	456, 885, 929, 1303, 1450
BshVI	ATCGAT	2 cut(s)	372, 1206
BsiEI	CGRYCG	1 cut(s)	1319
BsiSI	CCGG	4 cut(s)	457, 470, 665, 1586
BslI	CCNNNNNNNGG	5 cut(s)	104, 207, 452, 892, 936
BsmAI	GTCTC	3 cut(s)	10, 70, 1817
BsnI	GGCC	5 cut(s)	456, 885, 929, 1303, 1450
Bso31I	GGTCTC	2 cut(s)	10, 1817
Bsp1407I	TGTACA	1 cut(s)	554
Bsp143I	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
BspACI	CCGC	5 cut(s)	42, 901, 1135, 1315, 1786
BspANI	GGCC	5 cut(s)	456, 885, 929, 1303, 1450
BspCNI	CTCAG	5 cut(s)	151, 766, 1150, 1225, 1753
BspDI	ATCGAT	2 cut(s)	372, 1206
BspFNI	CGCG	1 cut(s)	658
BspHI	TCATGA	1 cut(s)	712
BspLI	GGNNCC	2 cut(s)	1048, 1419
BspMI	ACCTGC	1 cut(s)	1227
BspPI	GGATC	1 cut(s)	1532
BspQI	GCTCTTC	1 cut(s)	228
BspTI	CTTAAG	1 cut(s)	923
BspTNI	GGTCTC	2 cut(s)	10, 1817
BsrBI	CCGCTC	1 cut(s)	1315
BsrDI	GCAATG	1 cut(s)	457
BsrGI	TGTACA	1 cut(s)	554
BsrI	ACTGG	2 cut(s)	974, 992
BssECI	CCNNGG	5 cut(s)	862, 935, 936, 961, 962
BssMI	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
BssNAI	GTATAC	1 cut(s)	499
BssNI	GRCGYC	1 cut(s)	1872
Bst1107I	GTATAC	1 cut(s)	499
Bst2UI	CCWGG	4 cut(s)	863, 937, 963, 1224
Bst4CI	ACNGT	6 cut(s)	81, 625, 1002, 1017, 1286, 1944
Bst6I	CTCTTC	5 cut(s)	66, 228, 755, 1157, 1616
BstACI	GRCGYC	1 cut(s)	1872
BstAFI	CTTAAG	1 cut(s)	923
BstAUI	TGTACA	1 cut(s)	554
BstC8I	GCNNGC	3 cut(s)	608, 887, 1929
BstDEI	CTNAG	8 cut(s)	138, 192, 303, 753, 1158, 1212, 1458, 1761
BstENI	CCTNNNNNAGG	1 cut(s)	934
BstF5I	GGATG	3 cut(s)	1085, 1440, 1485
BstFNI	CGCG	1 cut(s)	658
BstH2I	RGCGCY	1 cut(s)	1369
BstHHI	GCGC	3 cut(s)	606, 658, 1368
BstKTI	GATC	7 cut(s)	103, 128, 767, 796, 1206, 1521, 1540
BstMAI	GTCTC	3 cut(s)	10, 70, 1817
BstMBI	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
BstMCI	CGRYCG	1 cut(s)	1319
BstMWI	GCNNNNNNNGC	3 cut(s)	66, 610, 1937
BstNI	CCWGG	4 cut(s)	863, 937, 963, 1224
BstNSI	RCATGY	3 cut(s)	437, 1786, 1931
BstSCI	CCNGG	6 cut(s)	664, 861, 935, 961, 1222, 1584
BstSFI	CTRYAG	2 cut(s)	998, 1402
BstUI	CGCG	1 cut(s)	658
BstV1I	GCAGC	4 cut(s)	72, 129, 622, 1936
BstX2I	RGATCY	1 cut(s)	764
BstYI	RGATCY	1 cut(s)	764
BstZ17I	GTATAC	1 cut(s)	499
Bsu15I	ATCGAT	2 cut(s)	372, 1206
BsuI	GTATCC	1 cut(s)	820
BsuRI	GGCC	5 cut(s)	456, 885, 929, 1303, 1450
BsuTUI	ATCGAT	2 cut(s)	372, 1206
BtrI	CACGTC	1 cut(s)	405
BtsCI	GGATG	3 cut(s)	1085, 1440, 1485
BtsI	GCAGTG	1 cut(s)	1174
BtsIMutI	CAGTG	3 cut(s)	86, 761, 1174
BveI	ACCTGC	1 cut(s)	1227
Cac8I	GCNNGC	3 cut(s)	608, 887, 1929
CaiI	CAGNNNCTG	1 cut(s)	1219
CciI	TCATGA	1 cut(s)	712
CfoI	GCGC	3 cut(s)	606, 658, 1368
Cfr13I	GGNCC	1 cut(s)	1226
ClaI	ATCGAT	2 cut(s)	372, 1206
CseI	GACGC	2 cut(s)	134, 647
Csp6I	GTAC	7 cut(s)	131, 467, 523, 555, 580, 700, 1167
CviQI	GTAC	7 cut(s)	131, 467, 523, 555, 580, 700, 1167
DdeI	CTNAG	8 cut(s)	138, 192, 303, 753, 1158, 1212, 1458, 1761
DpnI	GATC	7 cut(s)	102, 127, 766, 795, 1205, 1520, 1539
DpnII	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
DraIII	CACNNNGTG	1 cut(s)	272
EaeI	YGGCCR	3 cut(s)	454, 883, 1448
Eam1104I	CTCTTC	5 cut(s)	66, 228, 755, 1157, 1616
EarI	CTCTTC	5 cut(s)	66, 228, 755, 1157, 1616
Eco147I	AGGCCT	1 cut(s)	929
Eco31I	GGTCTC	2 cut(s)	10, 1817
Eco32I	GATATC	1 cut(s)	859
Eco47I	GGWCC	1 cut(s)	1226
Eco57I	CTGAAG	1 cut(s)	1901
EcoNI	CCTNNNNNAGG	1 cut(s)	934
EcoRI	GAATTC	2 cut(s)	460, 731
EcoRII	CCWGG	4 cut(s)	861, 935, 961, 1222
EcoRV	GATATC	1 cut(s)	859
EcoT22I	ATGCAT	2 cut(s)	697, 1657
FauI	CCCGC	2 cut(s)	49, 1142
FauNDI	CATATG	2 cut(s)	154, 1657
FbaI	TGATCA	1 cut(s)	793
FblI	GTMKAC	2 cut(s)	498, 1779
Fnu4HI	GCNGC	4 cut(s)	61, 143, 611, 1925
FokI	GGATG	3 cut(s)	1092, 1447, 1472
Fsp4HI	GCNGC	4 cut(s)	61, 143, 611, 1925
FspAI	RTGCGCAY	1 cut(s)	605
FspBI	CTAG	3 cut(s)	239, 269, 1187
FspI	TGCGCA	1 cut(s)	605
GlaI	GCGC	3 cut(s)	605, 657, 1367
GluI	GCNGC	4 cut(s)	61, 143, 611, 1925
HaeII	RGCGCY	1 cut(s)	1369
HaeIII	GGCC	5 cut(s)	456, 885, 929, 1303, 1450
HapII	CCGG	4 cut(s)	457, 470, 665, 1586
HgaI	GACGC	2 cut(s)	134, 647
HhaI	GCGC	3 cut(s)	606, 658, 1368
Hin1I	GRCGYC	1 cut(s)	1872
Hin6I	GCGC	3 cut(s)	604, 656, 1366
HinP1I	GCGC	3 cut(s)	604, 656, 1366
HindIII	AAGCTT	2 cut(s)	1099, 1493
HinfI	GANTC	8 cut(s)	14, 158, 275, 442, 513, 994, 1757, 1807
HpaII	CCGG	4 cut(s)	457, 470, 665, 1586
HphI	GGTGA	9 cut(s)	242, 284, 427, 878, 1163, 1213, 1441, 1474, 1637
Hpy166II	GTNNAC	5 cut(s)	499, 557, 1229, 1375, 1780
Hpy188I	TCNGA	6 cut(s)	402, 772, 1353, 1553, 1711, 1762
Hpy188III	TCNNGA	7 cut(s)	439, 713, 818, 1310, 1397, 1731, 1754
Hpy8I	GTNNAC	5 cut(s)	499, 557, 1229, 1375, 1780
HpyAV	CCTTC	5 cut(s)	264, 756, 1432, 1471, 1876
HpyCH4III	ACNGT	6 cut(s)	81, 625, 1002, 1017, 1286, 1944
HpyCH4IV	ACGT	3 cut(s)	404, 1181, 1872
HpyCH4V	TGCA	9 cut(s)	246, 450, 550, 695, 1179, 1508, 1655, 1694, 1931
HpyF10VI	GCNNNNNNNGC	3 cut(s)	66, 610, 1937
HpyF3I	CTNAG	8 cut(s)	138, 192, 303, 753, 1158, 1212, 1458, 1761
HpySE526I	ACGT	3 cut(s)	404, 1181, 1872
Hsp92I	GRCGYC	1 cut(s)	1872
HspAI	GCGC	3 cut(s)	604, 656, 1366
Ksp22I	TGATCA	1 cut(s)	793
Kzo9I	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
LguI	GCTCTTC	1 cut(s)	228
LmnI	GCTCC	5 cut(s)	201, 1312, 1333, 1386, 1788
Lsp1109I	GCAGC	4 cut(s)	72, 129, 622, 1936
LweI	GCATC	2 cut(s)	591, 1495
MaeI	CTAG	3 cut(s)	239, 269, 1187
MaeII	ACGT	3 cut(s)	404, 1181, 1872
MaeIII	GTNAC	6 cut(s)	392, 625, 866, 966, 1082, 1182
MalI	GATC	7 cut(s)	102, 127, 766, 795, 1205, 1520, 1539
MbiI	CCGCTC	1 cut(s)	1315
MboI	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
MflI	RGATCY	1 cut(s)	764
MlsI	TGGCCA	2 cut(s)	885, 1450
MluCI	AATT	8 cut(s)	460, 731, 773, 798, 956, 1105, 1341, 1933
MluNI	TGGCCA	2 cut(s)	885, 1450
MlyI	GAGTC	2 cut(s)	8, 1801
MmeI	TCCRAC	1 cut(s)	192
Mox20I	TGGCCA	2 cut(s)	885, 1450
Mph1103I	ATGCAT	2 cut(s)	697, 1657
MroXI	GAANNNNTTC	2 cut(s)	162, 1481
MscI	TGGCCA	2 cut(s)	885, 1450
MseI	TTAA	5 cut(s)	924, 984, 1064, 1145, 1698
MslI	CAYNNNNRTG	1 cut(s)	1146
Msp20I	TGGCCA	2 cut(s)	885, 1450
MspA1I	CMGCKG	1 cut(s)	142
MspCI	CTTAAG	1 cut(s)	923
MspI	CCGG	4 cut(s)	457, 470, 665, 1586
MspR9I	CCNGG	6 cut(s)	666, 863, 937, 963, 1224, 1586
MvaI	CCWGG	4 cut(s)	863, 937, 963, 1224
MvnI	CGCG	1 cut(s)	658
MwoI	GCNNNNNNNGC	3 cut(s)	66, 610, 1937
NciI	CCSGG	2 cut(s)	666, 1586
NdeI	CATATG	2 cut(s)	154, 1657
NdeII	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
NlaIV	GGNNCC	2 cut(s)	1048, 1419
NmeAIII	GCCGAG	1 cut(s)	1394
NmuCI	GTSAC	3 cut(s)	625, 866, 966
NsbI	TGCGCA	1 cut(s)	605
NsiI	ATGCAT	2 cut(s)	697, 1657
NspI	RCATGY	3 cut(s)	437, 1786, 1931
PaeI	GCATGC	1 cut(s)	1931
PagI	TCATGA	1 cut(s)	712
PaqCI	CACCTGC	1 cut(s)	1227
PasI	CCCWGGG	2 cut(s)	936, 962
PceI	AGGCCT	1 cut(s)	929
PciSI	GCTCTTC	1 cut(s)	228
PdmI	GAANNNNTTC	2 cut(s)	162, 1481
PfeI	GAWTC	6 cut(s)	158, 275, 442, 513, 994, 1757
PflMI	CCANNNNNTGG	1 cut(s)	452
PfoI	TCCNGGA	1 cut(s)	664
PkrI	GCNGC	4 cut(s)	62, 144, 612, 1926
PleI	GAGTC	2 cut(s)	8, 1801
PpsI	GAGTC	2 cut(s)	8, 1801
Psp6I	CCWGG	4 cut(s)	861, 935, 961, 1222
PspGI	CCWGG	4 cut(s)	861, 935, 961, 1222
PspN4I	GGNNCC	2 cut(s)	1048, 1419
PspPI	GGNCC	1 cut(s)	1226
PstNI	CAGNNNCTG	1 cut(s)	1219
PsuI	RGATCY	1 cut(s)	764
PvuII	CAGCTG	1 cut(s)	142
RsaI	GTAC	7 cut(s)	132, 468, 524, 556, 581, 701, 1168
RsaNI	GTAC	7 cut(s)	131, 467, 523, 555, 580, 700, 1167
RseI	CAYNNNNRTG	1 cut(s)	1146
SapI	GCTCTTC	1 cut(s)	228
SaqAI	TTAA	5 cut(s)	924, 984, 1064, 1145, 1698
SatI	GCNGC	4 cut(s)	61, 143, 611, 1925
Sau3AI	GATC	7 cut(s)	100, 125, 764, 793, 1203, 1518, 1537
Sau96I	GGNCC	1 cut(s)	1226
ScaI	AGTACT	2 cut(s)	524, 1168
SchI	GAGTC	2 cut(s)	8, 1801
ScrFI	CCNGG	6 cut(s)	666, 863, 937, 963, 1224, 1586
SfaNI	GCATC	2 cut(s)	591, 1495
SfcI	CTRYAG	2 cut(s)	998, 1402
SinI	GGWCC	1 cut(s)	1226
SmiMI	CAYNNNNRTG	1 cut(s)	1146
SmlI	CTYRAG	4 cut(s)	22, 630, 651, 923
SmoI	CTYRAG	4 cut(s)	22, 630, 651, 923
SphI	GCATGC	1 cut(s)	1931
Sse9I	AATT	8 cut(s)	460, 731, 773, 798, 956, 1105, 1341, 1933
SseBI	AGGCCT	1 cut(s)	929
SsiI	CCGC	5 cut(s)	42, 901, 1135, 1315, 1786
SspMI	CTAG	3 cut(s)	239, 269, 1187
StuI	AGGCCT	1 cut(s)	929
StyD4I	CCNGG	6 cut(s)	664, 861, 935, 961, 1222, 1584
TaaI	ACNGT	6 cut(s)	81, 625, 1002, 1017, 1286, 1944
TaiI	ACGT	3 cut(s)	407, 1184, 1875
TaqI	TCGA	5 cut(s)	372, 1206, 1319, 1614, 1805
TasI	AATT	8 cut(s)	460, 731, 773, 798, 956, 1105, 1341, 1933
TatI	WGTACW	4 cut(s)	522, 554, 699, 1166
TfiI	GAWTC	6 cut(s)	158, 275, 442, 513, 994, 1757
Tru1I	TTAA	5 cut(s)	924, 984, 1064, 1145, 1698
Tru9I	TTAA	5 cut(s)	924, 984, 1064, 1145, 1698
TscAI	CASTG	3 cut(s)	86, 761, 1181
TseFI	GTSAC	3 cut(s)	625, 866, 966
TseI	GCWGC	4 cut(s)	60, 142, 610, 1924
Tsp45I	GTSAC	3 cut(s)	625, 866, 966
TspGWI	ACGGA	2 cut(s)	138, 1880
TspRI	CASTG	3 cut(s)	86, 761, 1181
Van91I	CCANNNNNTGG	1 cut(s)	452
Vha464I	CTTAAG	1 cut(s)	923
VpaK11BI	GGWCC	1 cut(s)	1226
XagI	CCTNNNNNAGG	1 cut(s)	934
XapI	RAATTY	5 cut(s)	460, 731, 773, 798, 1933
XceI	RCATGY	3 cut(s)	437, 1786, 1931
XmiI	GTMKAC	2 cut(s)	498, 1779
XmnI	GAANNNNTTC	2 cut(s)	162, 1481
XspI	CTAG	3 cut(s)	239, 269, 1187
ZraI	GACGTC	1 cut(s)	1873
ZrmI	AGTACT	2 cut(s)	524, 1168
Zsp2I	ATGCAT	2 cut(s)	697, 1657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.