Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0017931

Physical Location & Seq

Genomic Coordinates Reverse (-)

15692789 .. 15695996

Gene Structure 3208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G013350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGCCTTCACCTCTCCAATCAAAGTCGAATCCCAATCCCAAGAATTTGTACAGCCAAGTCGGCGATGAGGATTGGGGAAAGAGTGTGGAAGAGGAAGTAGTTAAGGAGGAGAAAGACGAGCAGGCCCTTGTCGCCGAGCTCCGGCGCGATAGCGAAGAGAGACAGTGTAAGCGATTGAAACCAGATCAAGGTAGTTCATATACCCACAGATCAGTACCATCTCAGCTGCGTCCGTCATATGAATCTTTTCAAACTCCCAAGTCTTATGACACATCTAAGCTCCCCTCTGGGTGGTTGGATTGCTCATCGTTTGGTGAAGAGCTAGATTGCATGATACCTTCTAAAGTGCCACTAGGTGAATCCTACAATGTCTTTGTTCCTCATGCTAAGAGATACTCATTCAAGCAAGTGATTGAGGCACAGAGATTTGACATGCTAAGAAAACTCGGTTTGGTTATCGATTTGACCAACACAACTCGTTACTATCGGACGTGTGATTTGGTGAAAATGGGTATCAAGCATGTCAGGATTCCATGCAATGGCCGGAATTCTGTACCGGACAACTTTTCGGTAAATCGTTTCGTATACGAGGTTATGCGATTCAAAGAGTACTACCCAGAGAAGTATATCCTTGTGCATTGTACACATGGACACAATCGCACAGGGTACATGATAATACATTACTTGATGCGCACGCAGCCAATGAGGACAGTCACTCAAGCAATAAAAGATTTTGCTCAAGCGCGTCCTCCGGGAATATATAAACCTGACTACATCAATGCATTGTACTCATTCTATCATGAAATGAAGCCTGTGGAATTCGTTTGCCCACCTTCTCCTGAGTGGAAGAGATCTTCGGAATTTGTGCCAGACGACAATGATCAAATTTTGAAAAATATAATGACTAATGATGATATCCTGGGTGACGATATACCTGATGGCCAGCAAGAGGAACTGCGGAGGTTGTGCTACAAACTTCTTAAGGCCTTTCCCAGGGTAAGAGGAAGATGGCAATTCCCAGGGTCACACCCAGTTTCTCTTAACTGGGAGAATCTACAGTTGTTGAGGCAACAGTCTTACTATGCCACTTGGAAAGCTGATGGAACCCGTTATATGATGTTAATAACTATACATGGATGTTACTTGATTGATAGAAGCTTCAATTTTAGGAGGGTTCAAATGAGGTTTCCCCGCAAACACTTAAATGGTTCTACTGACAAGAGTACTCACCACTGCACGTTACTAGACGGGGAGATGGTGATCGATACTGAGCACCTGCCAGGTCCACAGAAGAAGCAGACCCGAAGATACCTTGTTTATGATATGATGGCACTCAACAACGGTTCTGTGGTAGAGTGGCCTTTTCAGGAGCGGTCGAAGAAGATTGAGGAGCAAGTAATTGAGCCTCGGACTAATGATCAGTGCCGAGTTTACGAAAGTAGGAGTAATAATCCTGACTACAGATATGACTTGGAACCATTCAGGGTGAGGATGAAGGGCTTTTGGCCACTCTCTAAGGTGAAGAAGATTTTGAAGGAGTTCATCCCAAAGCTTTCACATGATGCAGATGGCGTGATCTTTCAAGGTATGGACGATCCTTATGTTATCAGAAAACATGAACGCCTTGTGAAGTGGAAATACCCGGAAATGAACTCGGTTGATTTTCTCTTCGAGGTAGGTGGTGATGGTCGGCCACTGCTTTATCTGTATGCATTTGGAGAAAAACAACTAATGAAAGGAGAGAGGGTTGCATTTAAGGATAGTTCGGAACACTACTCTTTTTATTCGGGAAAAATAATAGAGTGTTTTCGGGATTCTGAGAAAAAAGAATGGGTCTACATGCGGAGCAGGACAGATAAATCGACTCCAAATGATGTAGAGACCTACAAAAAGGTAAAGAAAAGCATAGAGGACAATATCACGGAGGACGTCTTACTGAAGGAGATAGATAACATCATTCTTCTGCCCATGTATGTTGAGCAGCATGCAAATTCAGCACGGTTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004484 GO:0004651 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008192 GO:0009452 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016311 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019222 GO:0034641 GO:0036260 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0050355 GO:0050789 GO:0060255 GO:0065007 GO:0070568 GO:0071704 GO:0090304 GO:0098501 GO:0098507 GO:0098518 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

669

Amino Acids

78.9

Weight (kDa)

8.69

Isoelectric Point (pI)

52.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	148 - 266	1.5e-10	Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme	PF01331	343 - 546	1.4e-63	mRNA capping enzyme, catalytic domain
mRNA_cap_C	PF03919	583 - 646	2.4e-16	mRNA capping enzyme, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017931)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01290
fragaria_vesca	FvH4_3g12521
rosa_chinensis	RchiOBHm_Chr5g0020531
rosa_laevigata	RLG00000032536
rosa_multiflora	Rmu_sc0009745.1_g000011 Rmu_sc0010439.1_g000007
rosa_rugosa	Rorug05G0060300
rosa_samantha	Rh5BG150300 Rh5CG161700 Rh5DG149600
rosa_wichuraiana	Rw5G013350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1284
AatII	GACGTC	1 cut(s)	1932
Acc16I	TGCGCA	1 cut(s)	692
Acc36I	ACCTGC	1 cut(s)	1284
AccB7I	CCANNNNNTGG	1 cut(s)	539
AccBSI	CCGCTC	1 cut(s)	1372
AccI	GTMKAC	2 cut(s)	585, 1836
AccII	CGCG	2 cut(s)	147, 745
AciI	CCGC	4 cut(s)	958, 1192, 1372, 1843
AclWI	GGATC	1 cut(s)	1589
AcoI	YGGCCR	4 cut(s)	541, 940, 1505, 1691
AcsI	RAATTY	6 cut(s)	43, 547, 818, 860, 885, 1990
AcuI	CTGAAG	1 cut(s)	1958
AcyI	GRCGYC	1 cut(s)	1929
AdeI	CACNNNGTG	1 cut(s)	356
AfaI	GTAC	8 cut(s)	50, 216, 555, 611, 643, 668, 788, 1225
AfiI	CCNNNNNNNGG	6 cut(s)	141, 188, 291, 539, 949, 993
AflII	CTTAAG	1 cut(s)	980
AflIII	ACRYGT	1 cut(s)	491
AgsI	TTSAA	9 cut(s)	178, 251, 403, 604, 892, 1162, 1178, 1534, 1583
AjiI	CACGTC	1 cut(s)	492
AjnI	CCWGG	4 cut(s)	918, 992, 1018, 1279
AluBI	AGCT	7 cut(s)	139, 226, 280, 322, 1097, 1158, 1552
AluI	AGCT	7 cut(s)	139, 226, 280, 322, 1097, 1158, 1552
Alw21I	GWGCWC	2 cut(s)	141, 1275
Alw26I	GTCTC	2 cut(s)	154, 1874
AlwI	GGATC	1 cut(s)	1589
AoxI	GGCC	7 cut(s)	123, 541, 940, 984, 1358, 1505, 1691
ApeKI	GCWGC	3 cut(s)	226, 697, 1981
ApoI	RAATTY	6 cut(s)	43, 547, 818, 860, 885, 1990
ArsI	GACNNNNNNTTYG	2 cut(s)	481, 513
Asp700I	GAANNNNTTC	2 cut(s)	246, 1538
AspLEI	GCGC	3 cut(s)	147, 693, 745
AspS9I	GGNCC	2 cut(s)	124, 1283
AsuC2I	CCSGG	2 cut(s)	753, 1643
AsuHPI	GGTGA	9 cut(s)	326, 368, 514, 935, 1220, 1270, 1498, 1531, 1694
AvaII	GGWCC	1 cut(s)	1283
BalI	TGGCCA	2 cut(s)	942, 1507
BanII	GRGCYC	1 cut(s)	141
BarI	GAAGNNNNNNTAC	2 cut(s)	1622, 1654
Bbv12I	GWGCWC	2 cut(s)	141, 1275
BbvI	GCAGC	3 cut(s)	213, 709, 1993
BccI	CCATC	8 cut(s)	226, 932, 1002, 1094, 1249, 1321, 1562, 1679
BciT130I	CCWGG	4 cut(s)	920, 994, 1020, 1281
BclI	TGATCA	2 cut(s)	880, 1417
BcnI	CCSGG	2 cut(s)	753, 1643
BcoDI	GTCTC	2 cut(s)	154, 1874
BfaI	CTAG	3 cut(s)	323, 353, 1244
BfmI	CTRYAG	2 cut(s)	1055, 1459
BfrI	CTTAAG	1 cut(s)	980
BfuAI	ACCTGC	1 cut(s)	1284
BglI	GCCNNNNNGGC	1 cut(s)	60
BglII	AGATCT	1 cut(s)	851
BisI	GCNGC	3 cut(s)	227, 698, 1982
BlsI	GCNGC	3 cut(s)	228, 699, 1983
BmcAI	AGTACT	2 cut(s)	611, 1225
Bme1390I	CCNGG	6 cut(s)	753, 920, 994, 1020, 1281, 1643
Bme18I	GGWCC	1 cut(s)	1283
BmgBI	CACGTC	1 cut(s)	492
BmgT120I	GGNCC	2 cut(s)	124, 1283
BmiI	GGNNCC	2 cut(s)	1105, 1476
BmrFI	CCNGG	6 cut(s)	753, 920, 994, 1020, 1281, 1643
BmrI	ACTGGG	2 cut(s)	1025, 1054
BmsI	GCATC	2 cut(s)	678, 1552
BmuI	ACTGGG	2 cut(s)	1025, 1054
BpuEI	CTTGAG	2 cut(s)	702, 723
BpuMI	CCSGG	2 cut(s)	753, 1643
Bsa29I	ATCGAT	2 cut(s)	459, 1263
BsaBI	GATNNNNATC	1 cut(s)	1259
BsaHI	GRCGYC	1 cut(s)	1929
BsaI	GGTCTC	1 cut(s)	1874
BsaJI	CCNNGG	6 cut(s)	919, 992, 993, 1018, 1019, 1406
BsaWI	WCCGGW	1 cut(s)	556
BsaXI	ACNNNNNCTCC	2 cut(s)	1731, 1761
Bsc4I	CCNNNNNNNGG	6 cut(s)	141, 188, 291, 539, 949, 993
Bse1I	ACTGG	2 cut(s)	1031, 1049
Bse3DI	GCAATG	1 cut(s)	544
Bse8I	GATNNNNATC	1 cut(s)	1259
BseBI	CCWGG	4 cut(s)	920, 994, 1020, 1281
BseCI	ATCGAT	2 cut(s)	459, 1263
BseDI	CCNNGG	6 cut(s)	919, 992, 993, 1018, 1019, 1406
BseGI	GGATG	3 cut(s)	1142, 1497, 1542
BseJI	GATNNNNATC	1 cut(s)	1259
BseLI	CCNNNNNNNGG	6 cut(s)	141, 188, 291, 539, 949, 993
BseMI	GCAATG	1 cut(s)	544
BseMII	CTCAG	4 cut(s)	236, 831, 1260, 1809
BseNI	ACTGG	2 cut(s)	1031, 1049
BseRI	GAGGAG	2 cut(s)	122, 1403
BseXI	GCAGC	3 cut(s)	213, 709, 1993
BsgI	GTGCAG	1 cut(s)	1219
Bsh1236I	CGCG	2 cut(s)	147, 745
Bsh1285I	CGRYCG	1 cut(s)	1376
BshFI	GGCC	7 cut(s)	125, 543, 942, 986, 1360, 1507, 1693
BshVI	ATCGAT	2 cut(s)	459, 1263
BsiEI	CGRYCG	1 cut(s)	1376
BsiHKAI	GWGCWC	2 cut(s)	141, 1275
BsiSI	CCGG	5 cut(s)	142, 544, 557, 752, 1643
BslI	CCNNNNNNNGG	6 cut(s)	141, 188, 291, 539, 949, 993
BsmAI	GTCTC	2 cut(s)	154, 1874
BsnI	GGCC	7 cut(s)	125, 543, 942, 986, 1360, 1507, 1693
Bso31I	GGTCTC	1 cut(s)	1874
Bsp1286I	GDGCHC	2 cut(s)	141, 1275
Bsp1407I	TGTACA	2 cut(s)	48, 641
Bsp143I	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
BspACI	CCGC	4 cut(s)	958, 1192, 1372, 1843
BspANI	GGCC	7 cut(s)	125, 543, 942, 986, 1360, 1507, 1693
BspCNI	CTCAG	4 cut(s)	235, 832, 1261, 1810
BspDI	ATCGAT	2 cut(s)	459, 1263
BspFNI	CGCG	2 cut(s)	147, 745
BspHI	TCATGA	1 cut(s)	799
BspLI	GGNNCC	2 cut(s)	1105, 1476
BspMI	ACCTGC	1 cut(s)	1284
BspPI	GGATC	1 cut(s)	1589
BspQI	GCTCTTC	1 cut(s)	312
BspTI	CTTAAG	1 cut(s)	980
BspTNI	GGTCTC	1 cut(s)	1874
BsrBI	CCGCTC	1 cut(s)	1372
BsrDI	GCAATG	1 cut(s)	544
BsrGI	TGTACA	2 cut(s)	48, 641
BsrI	ACTGG	2 cut(s)	1031, 1049
BssECI	CCNNGG	6 cut(s)	919, 992, 993, 1018, 1019, 1406
BssMI	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
BssNAI	GTATAC	1 cut(s)	586
BssNI	GRCGYC	1 cut(s)	1929
Bst1107I	GTATAC	1 cut(s)	586
Bst2UI	CCWGG	4 cut(s)	920, 994, 1020, 1281
Bst4CI	ACNGT	6 cut(s)	165, 712, 1059, 1074, 1343, 2001
Bst6I	CTCTTC	5 cut(s)	84, 150, 312, 842, 1673
BstACI	GRCGYC	1 cut(s)	1929
BstAFI	CTTAAG	1 cut(s)	980
BstAUI	TGTACA	2 cut(s)	48, 641
BstC8I	GCNNGC	4 cut(s)	123, 695, 944, 1986
BstDEI	CTNAG	8 cut(s)	222, 276, 387, 437, 840, 1269, 1515, 1818
BstENI	CCTNNNNNAGG	1 cut(s)	991
BstF5I	GGATG	3 cut(s)	1142, 1497, 1542
BstFNI	CGCG	2 cut(s)	147, 745
BstHHI	GCGC	3 cut(s)	147, 693, 745
BstKTI	GATC	8 cut(s)	187, 212, 854, 883, 1263, 1420, 1578, 1597
BstMAI	GTCTC	2 cut(s)	154, 1874
BstMBI	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
BstMCI	CGRYCG	1 cut(s)	1376
BstMWI	GCNNNNNNNGC	4 cut(s)	60, 131, 697, 1994
BstNI	CCWGG	4 cut(s)	920, 994, 1020, 1281
BstNSI	RCATGY	4 cut(s)	436, 524, 1843, 1988
BstSCI	CCNGG	6 cut(s)	751, 918, 992, 1018, 1279, 1641
BstSFI	CTRYAG	2 cut(s)	1055, 1459
BstUI	CGCG	2 cut(s)	147, 745
BstV1I	GCAGC	3 cut(s)	213, 709, 1993
BstX2I	RGATCY	1 cut(s)	851
BstYI	RGATCY	1 cut(s)	851
BstZ17I	GTATAC	1 cut(s)	586
Bsu15I	ATCGAT	2 cut(s)	459, 1263
BsuRI	GGCC	7 cut(s)	125, 543, 942, 986, 1360, 1507, 1693
BsuTUI	ATCGAT	2 cut(s)	459, 1263
BtgZI	GCGATG	1 cut(s)	78
BtrI	CACGTC	1 cut(s)	492
BtsCI	GGATG	3 cut(s)	1142, 1497, 1542
BtsI	GCAGTG	2 cut(s)	1231, 1694
BtsIMutI	CAGTG	4 cut(s)	170, 1231, 1427, 1694
BveI	ACCTGC	1 cut(s)	1284
Cac8I	GCNNGC	4 cut(s)	123, 695, 944, 1986
CciI	TCATGA	1 cut(s)	799
CfoI	GCGC	3 cut(s)	147, 693, 745
Cfr13I	GGNCC	2 cut(s)	124, 1283
ClaI	ATCGAT	2 cut(s)	459, 1263
CseI	GACGC	2 cut(s)	218, 734
Csp6I	GTAC	8 cut(s)	49, 215, 554, 610, 642, 667, 787, 1224
CviQI	GTAC	8 cut(s)	49, 215, 554, 610, 642, 667, 787, 1224
DdeI	CTNAG	8 cut(s)	222, 276, 387, 437, 840, 1269, 1515, 1818
DpnI	GATC	8 cut(s)	186, 211, 853, 882, 1262, 1419, 1577, 1596
DpnII	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
DraIII	CACNNNGTG	1 cut(s)	356
EaeI	YGGCCR	4 cut(s)	541, 940, 1505, 1691
Eam1104I	CTCTTC	5 cut(s)	84, 150, 312, 842, 1673
EarI	CTCTTC	5 cut(s)	84, 150, 312, 842, 1673
Ecl136II	GAGCTC	1 cut(s)	139
Eco147I	AGGCCT	1 cut(s)	986
Eco24I	GRGCYC	1 cut(s)	141
Eco31I	GGTCTC	1 cut(s)	1874
Eco32I	GATATC	1 cut(s)	916
Eco47I	GGWCC	1 cut(s)	1283
Eco53kI	GAGCTC	1 cut(s)	139
Eco57I	CTGAAG	1 cut(s)	1958
EcoICRI	GAGCTC	1 cut(s)	139
EcoNI	CCTNNNNNAGG	1 cut(s)	991
EcoO109I	RGGNCCY	1 cut(s)	124
EcoRI	GAATTC	2 cut(s)	547, 818
EcoRII	CCWGG	4 cut(s)	918, 992, 1018, 1279
EcoRV	GATATC	1 cut(s)	916
EcoT22I	ATGCAT	2 cut(s)	784, 1714
EcoT38I	GRGCYC	1 cut(s)	141
FauI	CCCGC	1 cut(s)	1199
FauNDI	CATATG	1 cut(s)	238
FbaI	TGATCA	2 cut(s)	880, 1417
FblI	GTMKAC	2 cut(s)	585, 1836
Fnu4HI	GCNGC	3 cut(s)	227, 698, 1982
FokI	GGATG	3 cut(s)	1149, 1504, 1529
FriOI	GRGCYC	1 cut(s)	141
Fsp4HI	GCNGC	3 cut(s)	227, 698, 1982
FspAI	RTGCGCAY	1 cut(s)	692
FspBI	CTAG	3 cut(s)	323, 353, 1244
FspI	TGCGCA	1 cut(s)	692
GlaI	GCGC	3 cut(s)	146, 692, 744
GluI	GCNGC	3 cut(s)	227, 698, 1982
HaeIII	GGCC	7 cut(s)	125, 543, 942, 986, 1360, 1507, 1693
HapII	CCGG	5 cut(s)	142, 544, 557, 752, 1643
HgaI	GACGC	2 cut(s)	218, 734
HhaI	GCGC	3 cut(s)	147, 693, 745
Hin1I	GRCGYC	1 cut(s)	1929
Hin6I	GCGC	3 cut(s)	145, 691, 743
HinP1I	GCGC	3 cut(s)	145, 691, 743
HindIII	AAGCTT	2 cut(s)	1156, 1550
HinfI	GANTC	8 cut(s)	28, 242, 359, 529, 600, 1051, 1814, 1864
HpaII	CCGG	5 cut(s)	142, 544, 557, 752, 1643
HphI	GGTGA	9 cut(s)	326, 368, 514, 935, 1220, 1270, 1498, 1531, 1694
Hpy166II	GTNNAC	5 cut(s)	586, 644, 1286, 1432, 1837
Hpy188I	TCNGA	6 cut(s)	489, 859, 1410, 1610, 1768, 1819
Hpy188III	TCNNGA	7 cut(s)	526, 800, 839, 1367, 1454, 1788, 1811
Hpy8I	GTNNAC	5 cut(s)	586, 644, 1286, 1432, 1837
HpyAV	CCTTC	6 cut(s)	15, 348, 843, 1489, 1528, 1933
HpyCH4III	ACNGT	6 cut(s)	165, 712, 1059, 1074, 1343, 2001
HpyCH4IV	ACGT	3 cut(s)	491, 1238, 1929
HpyCH4V	TGCA	9 cut(s)	330, 537, 637, 782, 1236, 1565, 1712, 1751, 1988
HpyF10VI	GCNNNNNNNGC	4 cut(s)	60, 131, 697, 1994
HpyF3I	CTNAG	8 cut(s)	222, 276, 387, 437, 840, 1269, 1515, 1818
HpySE526I	ACGT	3 cut(s)	491, 1238, 1929
Hsp92I	GRCGYC	1 cut(s)	1929
HspAI	GCGC	3 cut(s)	145, 691, 743
Ksp22I	TGATCA	2 cut(s)	880, 1417
Kzo9I	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
LguI	GCTCTTC	1 cut(s)	312
LmnI	GCTCC	5 cut(s)	144, 285, 1369, 1390, 1845
Lsp1109I	GCAGC	3 cut(s)	213, 709, 1993
LweI	GCATC	2 cut(s)	678, 1552
MaeI	CTAG	3 cut(s)	323, 353, 1244
MaeII	ACGT	3 cut(s)	491, 1238, 1929
MaeIII	GTNAC	6 cut(s)	479, 712, 923, 1023, 1139, 1239
MalI	GATC	8 cut(s)	186, 211, 853, 882, 1262, 1419, 1577, 1596
MbiI	CCGCTC	1 cut(s)	1372
MboI	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
MflI	RGATCY	1 cut(s)	851
MhlI	GDGCHC	2 cut(s)	141, 1275
MlsI	TGGCCA	2 cut(s)	942, 1507
MluCI	AATT	9 cut(s)	43, 547, 818, 860, 885, 1013, 1162, 1398, 1990
MluNI	TGGCCA	2 cut(s)	942, 1507
MlyI	GAGTC	1 cut(s)	1858
MmeI	TCCRAC	1 cut(s)	276
Mox20I	TGGCCA	2 cut(s)	942, 1507
Mph1103I	ATGCAT	2 cut(s)	784, 1714
MroXI	GAANNNNTTC	2 cut(s)	246, 1538
MscI	TGGCCA	2 cut(s)	942, 1507
MseI	TTAA	6 cut(s)	102, 981, 1041, 1121, 1202, 1755
MslI	CAYNNNNRTG	1 cut(s)	1203
Msp20I	TGGCCA	2 cut(s)	942, 1507
MspA1I	CMGCKG	1 cut(s)	226
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	5 cut(s)	142, 544, 557, 752, 1643
MspR9I	CCNGG	6 cut(s)	753, 920, 994, 1020, 1281, 1643
MvaI	CCWGG	4 cut(s)	920, 994, 1020, 1281
MvnI	CGCG	2 cut(s)	147, 745
MwoI	GCNNNNNNNGC	4 cut(s)	60, 131, 697, 1994
NciI	CCSGG	2 cut(s)	753, 1643
NdeI	CATATG	1 cut(s)	238
NdeII	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
NlaIV	GGNNCC	2 cut(s)	1105, 1476
NmeAIII	GCCGAG	2 cut(s)	160, 1451
NmuCI	GTSAC	3 cut(s)	712, 923, 1023
NsbI	TGCGCA	1 cut(s)	692
NsiI	ATGCAT	2 cut(s)	784, 1714
NspI	RCATGY	4 cut(s)	436, 524, 1843, 1988
PaeI	GCATGC	1 cut(s)	1988
PagI	TCATGA	1 cut(s)	799
PaqCI	CACCTGC	1 cut(s)	1284
PasI	CCCWGGG	2 cut(s)	993, 1019
PceI	AGGCCT	1 cut(s)	986
PciSI	GCTCTTC	1 cut(s)	312
PdmI	GAANNNNTTC	2 cut(s)	246, 1538
PfeI	GAWTC	7 cut(s)	28, 242, 359, 529, 600, 1051, 1814
PflMI	CCANNNNNTGG	1 cut(s)	539
PfoI	TCCNGGA	1 cut(s)	751
PkrI	GCNGC	3 cut(s)	228, 699, 1983
PleI	GAGTC	1 cut(s)	1858
PpsI	GAGTC	1 cut(s)	1858
Psp124BI	GAGCTC	1 cut(s)	141
Psp6I	CCWGG	4 cut(s)	918, 992, 1018, 1279
PspGI	CCWGG	4 cut(s)	918, 992, 1018, 1279
PspN4I	GGNNCC	2 cut(s)	1105, 1476
PspPI	GGNCC	2 cut(s)	124, 1283
PsuI	RGATCY	1 cut(s)	851
PvuII	CAGCTG	1 cut(s)	226
RsaI	GTAC	8 cut(s)	50, 216, 555, 611, 643, 668, 788, 1225
RsaNI	GTAC	8 cut(s)	49, 215, 554, 610, 642, 667, 787, 1224
RseI	CAYNNNNRTG	1 cut(s)	1203
SacI	GAGCTC	1 cut(s)	141
SapI	GCTCTTC	1 cut(s)	312
SaqAI	TTAA	6 cut(s)	102, 981, 1041, 1121, 1202, 1755
SatI	GCNGC	3 cut(s)	227, 698, 1982
Sau3AI	GATC	8 cut(s)	184, 209, 851, 880, 1260, 1417, 1575, 1594
Sau96I	GGNCC	2 cut(s)	124, 1283
ScaI	AGTACT	2 cut(s)	611, 1225
SchI	GAGTC	1 cut(s)	1858
ScrFI	CCNGG	6 cut(s)	753, 920, 994, 1020, 1281, 1643
SduI	GDGCHC	2 cut(s)	141, 1275
SfaNI	GCATC	2 cut(s)	678, 1552
SfcI	CTRYAG	2 cut(s)	1055, 1459
SinI	GGWCC	1 cut(s)	1283
SmiMI	CAYNNNNRTG	1 cut(s)	1203
SmlI	CTYRAG	3 cut(s)	717, 738, 980
SmoI	CTYRAG	3 cut(s)	717, 738, 980
SphI	GCATGC	1 cut(s)	1988
Sse9I	AATT	9 cut(s)	43, 547, 818, 860, 885, 1013, 1162, 1398, 1990
SseBI	AGGCCT	1 cut(s)	986
SsiI	CCGC	4 cut(s)	958, 1192, 1372, 1843
SspMI	CTAG	3 cut(s)	323, 353, 1244
SstI	GAGCTC	1 cut(s)	141
StuI	AGGCCT	1 cut(s)	986
StyD4I	CCNGG	6 cut(s)	751, 918, 992, 1018, 1279, 1641
TaaI	ACNGT	6 cut(s)	165, 712, 1059, 1074, 1343, 2001
TaiI	ACGT	3 cut(s)	494, 1241, 1932
TaqI	TCGA	6 cut(s)	26, 459, 1263, 1376, 1671, 1862
TasI	AATT	9 cut(s)	43, 547, 818, 860, 885, 1013, 1162, 1398, 1990
TatI	WGTACW	5 cut(s)	48, 609, 641, 786, 1223
TfiI	GAWTC	7 cut(s)	28, 242, 359, 529, 600, 1051, 1814
Tru1I	TTAA	6 cut(s)	102, 981, 1041, 1121, 1202, 1755
Tru9I	TTAA	6 cut(s)	102, 981, 1041, 1121, 1202, 1755
TscAI	CASTG	4 cut(s)	170, 1238, 1427, 1701
TseFI	GTSAC	3 cut(s)	712, 923, 1023
TseI	GCWGC	3 cut(s)	226, 697, 1981
Tsp45I	GTSAC	3 cut(s)	712, 923, 1023
TspDTI	ATGAA	9 cut(s)	186, 255, 816, 821, 1508, 1531, 1632, 1664, 1748
TspGWI	ACGGA	2 cut(s)	222, 1937
TspRI	CASTG	4 cut(s)	170, 1238, 1427, 1701
Van91I	CCANNNNNTGG	1 cut(s)	539
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	1 cut(s)	1283
XagI	CCTNNNNNAGG	1 cut(s)	991
XapI	RAATTY	6 cut(s)	43, 547, 818, 860, 885, 1990
XceI	RCATGY	4 cut(s)	436, 524, 1843, 1988
XmiI	GTMKAC	2 cut(s)	585, 1836
XmnI	GAANNNNTTC	2 cut(s)	246, 1538
XspI	CTAG	3 cut(s)	323, 353, 1244
ZraI	GACGTC	1 cut(s)	1930
ZrmI	AGTACT	2 cut(s)	611, 1225
Zsp2I	ATGCAT	2 cut(s)	784, 1714

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.