Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0017265

Physical Location & Seq

Genomic Coordinates Reverse (-)

35529774 .. 35531777

Gene Structure 2004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG285900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGTGATGGAGTGGACTAGAGGACCAACGATCGGCCGCGGCTCCACCGCCACCGTCTCTCTAGCCACATCAGCCCTCTCCGGTGAGGTCTTCGCGGTGAAGTCGGCCGAGCTTTCGCAGTCGTCGTTCTTGCAAAAGGAGCAGCGTTTTCTATCTAAGCTGAGCTCTCCTCATGTGGTCAAGTACTTAGGTTGTGATGTTAGCACTGAACACAATGAGCCTATGTACAATCTTTTCATGGAGTACGTACCCGGCGGCACGCTTTCCGATGCGATTCAAAGACATGGAAAGGAGCTCGAGGAGTGTATGATCCAATCATACACGCACCAGATTGTGGAGGGGTTGGGATATCTTCATTCAATTGGGTTGGCGCATTGTGACATTAAGAGCCAGAACATTTTGGTGTCTGAAGAGAGTGCCAAGATCAAAATTGCTGATCTGGGTTGTGCTAAATTGGTGCATGAAGCATCCACGTCAGCATTTTCCGGCACGCCGGTGTTCATGGCGCCGGAGGTGGCACGCGGAGAAGAGCAGGGTTTTGAAGCAGATATATGGGCACTTGGCTGTACATTGATTGAAATGGCCACAGGGGGCAATAGCCCCTGGCCGGATGTAAGTGACCCTGTTTCCGCTCTCTACCGGATTGGATTCTCCGGTGACTTGCCGGAGTTTCCGAGATGGCTTTCGAAAGAGGGTAAGGATTTCTTGAGCAAGTGTTTGACGACATGCCCAAGAGAGAGGTGGACAGCTAAGAAGCTTCTTGAGCATCCATTTCTTAAAGACTACTCAATGGGGTCTACGACTCTGAGCTCATCTCCTATTAGTGTGTTGGATCAAGGCCTTTGGGATTCATTTGAAGTCTTTGAAGAAGCTCCTCAGAATCAAGTTTGTGAAATCATTTGTTCCAGTTCTTCTCCGCAAGAAAGGATCAAGATGTTGATCGGAGGTACTTGTTCTGCATTTTCAGGTATACCCAATTGGGAATTTGATGGGAATTGGTGCACTGTTAGAAGCAATGGTGCTGAGGATAGCCAAGCCTTATTGAAGAGCAACAATGTCATTGTTGCTATTTCAGAGCAGGAATATATGACGGCAACTGTTGCATCAGATATGGATTCCATTATTGATGAGGAGCTTCACAGTTCAACGTGTGATGATAATGAGGAAATAGATTCTGAATGTTTTGTAGAGTCTAACAGTAGAATTGGCAGTGATGGAGATTTTGTAATTTCATACATAGTTACAGACGATTCTTTCGTAAACAATCTTGATATTGAACAAGATACTCGGAATTATTCTTTTATTCACTCCCATTGTTATCATTCGTGTTTTGATTTTTCTGGTCAATCTGTGGTGCTTAAGTTCCTCTTGTTAATGTCTTCTCTGTTTTGTGTTAGTTTGGTACAATGCCACATGACAGATCAATTTCTCTACAGGGTAAATGCATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

483

Amino Acids

53.43

Weight (kDa)

4.6

Isoelectric Point (pI)

48.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	7 - 259	2.9e-57	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	10 - 255	5.3e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017265)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g23120
malus_domestica	MD00G1159200.v1.1 MD11G1213700.v1.1
prunus_persica	Prupe.4G217600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0040771
rosa_laevigata	RLG00000034000
rosa_multiflora	Rmu_ssc0000274.1_g000002
rosa_rugosa	Rorug05G0187100
rosa_samantha	Rh5AG272900 Rh5BG278000 Rh5CG310000 Rh5DG285900
rosa_wichuraiana	Rw5G025660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	505
AccB7I	CCANNNNNTGG	1 cut(s)	334
AccBSI	CCGCTC	1 cut(s)	632
AccI	GTMKAC	2 cut(s)	797, 970
AccII	CGCG	3 cut(s)	39, 95, 522
AciI	CCGC	8 cut(s)	37, 39, 48, 95, 255, 522, 630, 917
AclWI	GGATC	3 cut(s)	304, 840, 935
AcoI	YGGCCR	4 cut(s)	34, 105, 582, 605
AcsI	RAATTY	1 cut(s)	983
AcuI	CTGAAG	1 cut(s)	429
AcyI	GRCGYC	1 cut(s)	506
AfaI	GTAC	7 cut(s)	185, 227, 245, 249, 568, 949, 1404
AfiI	CCNNNNNNNGG	3 cut(s)	32, 334, 607
AflII	CTTAAG	1 cut(s)	1358
AflIII	ACRYGT	1 cut(s)	1148
AgsI	TTSAA	9 cut(s)	278, 360, 542, 578, 857, 866, 1045, 1146, 1277
AjiI	CACGTC	1 cut(s)	474
AjnI	CCWGG	1 cut(s)	602
AleI	CACNNNNGTG	1 cut(s)	494
AluBI	AGCT	9 cut(s)	112, 160, 165, 295, 749, 757, 810, 872, 1135
AluI	AGCT	9 cut(s)	112, 160, 165, 295, 749, 757, 810, 872, 1135
Alw21I	GWGCWC	4 cut(s)	167, 297, 812, 1004
Alw26I	GTCTC	1 cut(s)	61
Alw44I	GTGCAC	1 cut(s)	1000
AlwI	GGATC	3 cut(s)	304, 840, 935
Ama87I	CYCGRG	1 cut(s)	296
AoxI	GGCC	5 cut(s)	34, 105, 582, 605, 838
ApaLI	GTGCAC	1 cut(s)	1000
ApeKI	GCWGC	1 cut(s)	142
ApoI	RAATTY	1 cut(s)	983
ArsI	GACNNNNNNTTYG	2 cut(s)	1238, 1270
AspLEI	GCGC	2 cut(s)	373, 508
AspS9I	GGNCC	1 cut(s)	23
AsuC2I	CCSGG	1 cut(s)	252
AsuHPI	GGTGA	4 cut(s)	16, 95, 109, 668
AsuII	TTCGAA	1 cut(s)	686
AvaI	CYCGRG	1 cut(s)	296
AvaII	GGWCC	1 cut(s)	23
BaeGI	GKGCMC	2 cut(s)	559, 1004
BalI	TGGCCA	1 cut(s)	584
BanI	GGYRCC	1 cut(s)	505
BanII	GRGCYC	3 cut(s)	167, 297, 812
BbsI	GAAGAC	2 cut(s)	82, 1371
Bbv12I	GWGCWC	4 cut(s)	167, 297, 812, 1004
BbvCI	CCTCAGC	1 cut(s)	1023
BbvI	GCAGC	1 cut(s)	154
BccI	CCATC	3 cut(s)	672, 983, 1208
BceAI	ACGGC	1 cut(s)	1107
BciT130I	CCWGG	1 cut(s)	604
BcnI	CCSGG	1 cut(s)	252
BcoDI	GTCTC	1 cut(s)	61
BfaI	CTAG	2 cut(s)	18, 62
BfmI	CTRYAG	1 cut(s)	1432
BfoI	RGCGCY	1 cut(s)	509
BfrI	CTTAAG	1 cut(s)	1358
BisI	GCNGC	4 cut(s)	37, 40, 143, 256
BlpI	GCTNAGC	1 cut(s)	161
BlsI	GCNGC	4 cut(s)	38, 41, 144, 257
BmcAI	AGTACT	1 cut(s)	185
Bme1390I	CCNGG	2 cut(s)	252, 604
Bme18I	GGWCC	1 cut(s)	23
BmeT110I	CYCGRG	1 cut(s)	296
BmgBI	CACGTC	1 cut(s)	474
BmgT120I	GGNCC	1 cut(s)	23
BmiI	GGNNCC	2 cut(s)	43, 507
BmrFI	CCNGG	2 cut(s)	252, 604
BmsI	GCATC	4 cut(s)	259, 476, 775, 1112
BpiI	GAAGAC	2 cut(s)	82, 1371
BplI	GAGNNNNNCTC	4 cut(s)	154, 186, 799, 831
Bpu10I	CCTNAGC	1 cut(s)	1023
Bpu1102I	GCTNAGC	1 cut(s)	161
Bpu14I	TTCGAA	1 cut(s)	686
BpuEI	CTTGAG	2 cut(s)	727, 782
BpuMI	CCSGG	1 cut(s)	252
BsaAI	YACGTR	1 cut(s)	247
BsaBI	GATNNNNATC	1 cut(s)	938
BsaHI	GRCGYC	1 cut(s)	506
BsaJI	CCNNGG	2 cut(s)	37, 602
BsaWI	WCCGGW	3 cut(s)	80, 639, 653
BsaXI	ACNNNNNCTCC	2 cut(s)	1209, 1239
Bsc4I	CCNNNNNNNGG	3 cut(s)	32, 334, 607
Bse118I	RCCGGY	1 cut(s)	493
Bse1I	ACTGG	1 cut(s)	906
Bse3DI	GCAATG	1 cut(s)	1021
Bse8I	GATNNNNATC	1 cut(s)	938
BseBI	CCWGG	1 cut(s)	604
BseDI	CCNNGG	2 cut(s)	37, 602
BseGI	GGATG	3 cut(s)	467, 616, 766
BseJI	GATNNNNATC	1 cut(s)	938
BseLI	CCNNNNNNNGG	3 cut(s)	32, 334, 607
BseMI	GCAATG	1 cut(s)	1021
BseMII	CTCAG	4 cut(s)	152, 797, 890, 1014
BseNI	ACTGG	1 cut(s)	906
BseRI	GAGGAG	4 cut(s)	159, 314, 864, 1145
BseSI	GKGCMC	2 cut(s)	559, 1004
BseX3I	CGGCCG	2 cut(s)	34, 105
BseXI	GCAGC	1 cut(s)	154
Bsh1236I	CGCG	3 cut(s)	39, 95, 522
Bsh1285I	CGRYCG	3 cut(s)	33, 37, 108
BshFI	GGCC	5 cut(s)	36, 107, 584, 607, 840
BshNI	GGYRCC	1 cut(s)	505
BsiEI	CGRYCG	3 cut(s)	33, 37, 108
BsiHKAI	GWGCWC	4 cut(s)	167, 297, 812, 1004
BsiHKCI	CYCGRG	1 cut(s)	296
BsiSI	CCGG	9 cut(s)	81, 252, 486, 494, 509, 608, 640, 654, 665
BslI	CCNNNNNNNGG	3 cut(s)	32, 334, 607
BsmAI	GTCTC	1 cut(s)	61
BsmBI	CGTCTC	1 cut(s)	61
BsnI	GGCC	5 cut(s)	36, 107, 584, 607, 840
BsoBI	CYCGRG	1 cut(s)	296
Bsp119I	TTCGAA	1 cut(s)	686
Bsp1286I	GDGCHC	5 cut(s)	167, 297, 559, 812, 1004
Bsp1407I	TGTACA	2 cut(s)	225, 566
Bsp143I	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
Bsp1720I	GCTNAGC	1 cut(s)	161
BspACI	CCGC	8 cut(s)	37, 39, 48, 95, 255, 522, 630, 917
BspANI	GGCC	5 cut(s)	36, 107, 584, 607, 840
BspCNI	CTCAG	4 cut(s)	153, 798, 889, 1015
BspFNI	CGCG	3 cut(s)	39, 95, 522
BspLI	GGNNCC	2 cut(s)	43, 507
BspPI	GGATC	3 cut(s)	304, 840, 935
BspQI	GCTCTTC	2 cut(s)	522, 1040
BspT104I	TTCGAA	1 cut(s)	686
BspT107I	GGYRCC	1 cut(s)	505
BspTI	CTTAAG	1 cut(s)	1358
BsrBI	CCGCTC	1 cut(s)	632
BsrDI	GCAATG	1 cut(s)	1021
BsrFI	RCCGGY	1 cut(s)	493
BsrGI	TGTACA	2 cut(s)	225, 566
BsrI	ACTGG	1 cut(s)	906
BssAI	RCCGGY	1 cut(s)	493
BssECI	CCNNGG	2 cut(s)	37, 602
BssMI	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
BssNAI	GTATAC	1 cut(s)	971
BssNI	GRCGYC	1 cut(s)	506
Bst1107I	GTATAC	1 cut(s)	971
Bst2UI	CCWGG	1 cut(s)	604
Bst4CI	ACNGT	5 cut(s)	55, 1006, 1099, 1142, 1199
Bst6I	CTCTTC	3 cut(s)	405, 522, 1040
BstACI	GRCGYC	1 cut(s)	506
BstAFI	CTTAAG	1 cut(s)	1358
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstAUI	TGTACA	2 cut(s)	225, 566
BstBAI	YACGTR	1 cut(s)	247
BstBI	TTCGAA	1 cut(s)	686
BstC8I	GCNNGC	3 cut(s)	260, 491, 520
BstDEI	CTNAG	7 cut(s)	156, 161, 187, 750, 806, 876, 1023
BstDSI	CCRYGG	1 cut(s)	37
BstF5I	GGATG	3 cut(s)	467, 616, 766
BstFNI	CGCG	3 cut(s)	39, 95, 522
BstH2I	RGCGCY	1 cut(s)	509
BstHHI	GCGC	2 cut(s)	373, 508
BstKTI	GATC	8 cut(s)	33, 312, 426, 439, 835, 930, 942, 1423
BstMAI	GTCTC	1 cut(s)	61
BstMBI	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
BstMCI	CGRYCG	3 cut(s)	33, 37, 108
BstMWI	GCNNNNNNNGC	4 cut(s)	71, 139, 763, 1100
BstNI	CCWGG	1 cut(s)	604
BstNSI	RCATGY	1 cut(s)	729
BstSCI	CCNGG	2 cut(s)	250, 602
BstSFI	CTRYAG	1 cut(s)	1432
BstSLI	GKGCMC	2 cut(s)	559, 1004
BstSNI	TACGTA	1 cut(s)	247
BstUI	CGCG	3 cut(s)	39, 95, 522
BstV1I	GCAGC	1 cut(s)	154
BstV2I	GAAGAC	2 cut(s)	82, 1371
BstZ17I	GTATAC	1 cut(s)	971
BstZI	CGGCCG	2 cut(s)	34, 105
BsuRI	GGCC	5 cut(s)	36, 107, 584, 607, 840
BtgI	CCRYGG	1 cut(s)	37
BtrI	CACGTC	1 cut(s)	474
BtsCI	GGATG	3 cut(s)	467, 616, 766
BtsI	GCAGTG	1 cut(s)	1216
BtsIMutI	CAGTG	3 cut(s)	204, 1002, 1216
Cac8I	GCNNGC	3 cut(s)	260, 491, 520
CfoI	GCGC	2 cut(s)	373, 508
Cfr10I	RCCGGY	1 cut(s)	493
Cfr13I	GGNCC	1 cut(s)	23
Cfr42I	CCGCGG	1 cut(s)	40
Csp6I	GTAC	7 cut(s)	184, 226, 244, 248, 567, 948, 1403
CviAII	CATG	7 cut(s)	173, 238, 284, 461, 502, 726, 1414
CviQI	GTAC	7 cut(s)	184, 226, 244, 248, 567, 948, 1403
DdeI	CTNAG	7 cut(s)	156, 161, 187, 750, 806, 876, 1023
DinI	GGCGCC	1 cut(s)	507
DpnI	GATC	8 cut(s)	32, 311, 425, 438, 834, 929, 941, 1422
DpnII	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
EaeI	YGGCCR	4 cut(s)	34, 105, 582, 605
EagI	CGGCCG	2 cut(s)	34, 105
Eam1104I	CTCTTC	3 cut(s)	405, 522, 1040
EarI	CTCTTC	3 cut(s)	405, 522, 1040
Ecl136II	GAGCTC	3 cut(s)	165, 295, 810
EclXI	CGGCCG	2 cut(s)	34, 105
Eco105I	TACGTA	1 cut(s)	247
Eco147I	AGGCCT	1 cut(s)	840
Eco24I	GRGCYC	3 cut(s)	167, 297, 812
Eco32I	GATATC	1 cut(s)	350
Eco47I	GGWCC	1 cut(s)	23
Eco52I	CGGCCG	2 cut(s)	34, 105
Eco53kI	GAGCTC	3 cut(s)	165, 295, 810
Eco57I	CTGAAG	1 cut(s)	429
Eco88I	CYCGRG	1 cut(s)	296
EcoICRI	GAGCTC	3 cut(s)	165, 295, 810
EcoRII	CCWGG	1 cut(s)	602
EcoRV	GATATC	1 cut(s)	350
EcoT22I	ATGCAT	1 cut(s)	1447
EcoT38I	GRGCYC	3 cut(s)	167, 297, 812
EgeI	GGCGCC	1 cut(s)	507
EheI	GGCGCC	1 cut(s)	507
Esp3I	CGTCTC	1 cut(s)	61
FaeI	CATG	7 cut(s)	176, 241, 287, 464, 505, 729, 1417
FalI	AAGNNNNNCTT	4 cut(s)	689, 721, 1352, 1384
FatI	CATG	7 cut(s)	172, 237, 283, 460, 501, 725, 1413
FblI	GTMKAC	2 cut(s)	797, 970
Fnu4HI	GCNGC	4 cut(s)	37, 40, 143, 256
FokI	GGATG	3 cut(s)	454, 623, 753
FriOI	GRGCYC	3 cut(s)	167, 297, 812
Fsp4HI	GCNGC	4 cut(s)	37, 40, 143, 256
FspBI	CTAG	2 cut(s)	18, 62
GlaI	GCGC	2 cut(s)	372, 507
GluI	GCNGC	4 cut(s)	37, 40, 143, 256
HaeII	RGCGCY	1 cut(s)	509
HaeIII	GGCC	5 cut(s)	36, 107, 584, 607, 840
HapII	CCGG	9 cut(s)	81, 252, 486, 494, 509, 608, 640, 654, 665
HhaI	GCGC	2 cut(s)	373, 508
Hin1I	GRCGYC	1 cut(s)	506
Hin1II	CATG	7 cut(s)	176, 241, 287, 464, 505, 729, 1417
Hin6I	GCGC	2 cut(s)	371, 506
HinP1I	GCGC	2 cut(s)	371, 506
HindIII	AAGCTT	1 cut(s)	755
HinfI	GANTC	9 cut(s)	274, 648, 802, 848, 880, 1115, 1172, 1190, 1250
HpaII	CCGG	9 cut(s)	81, 252, 486, 494, 509, 608, 640, 654, 665
HphI	GGTGA	4 cut(s)	16, 95, 109, 668
Hpy166II	GTNNAC	6 cut(s)	15, 744, 798, 971, 1002, 1261
Hpy188III	TCNNGA	4 cut(s)	706, 761, 931, 1268
Hpy8I	GTNNAC	6 cut(s)	15, 744, 798, 971, 1002, 1261
Hpy99I	CGWCG	1 cut(s)	127
HpyCH4III	ACNGT	5 cut(s)	55, 1006, 1099, 1142, 1199
HpyCH4IV	ACGT	3 cut(s)	246, 473, 1148
HpyCH4V	TGCA	6 cut(s)	133, 460, 959, 1002, 1103, 1445
HpyF10VI	GCNNNNNNNGC	4 cut(s)	71, 139, 763, 1100
HpyF3I	CTNAG	7 cut(s)	156, 161, 187, 750, 806, 876, 1023
HpySE526I	ACGT	3 cut(s)	246, 473, 1148
Hsp92I	GRCGYC	1 cut(s)	506
Hsp92II	CATG	7 cut(s)	176, 241, 287, 464, 505, 729, 1417
HspAI	GCGC	2 cut(s)	371, 506
KasI	GGCGCC	1 cut(s)	505
KspI	CCGCGG	1 cut(s)	40
Kzo9I	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
LguI	GCTCTTC	2 cut(s)	522, 1040
LmnI	GCTCC	5 cut(s)	47, 139, 292, 877, 1132
Lsp1109I	GCAGC	1 cut(s)	154
LweI	GCATC	4 cut(s)	259, 476, 775, 1112
MaeI	CTAG	2 cut(s)	18, 62
MaeII	ACGT	3 cut(s)	246, 473, 1148
MaeIII	GTNAC	4 cut(s)	377, 617, 656, 1240
MalI	GATC	8 cut(s)	32, 311, 425, 438, 834, 929, 941, 1422
MbiI	CCGCTC	1 cut(s)	632
MboI	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
MboII	GAAGA	8 cut(s)	82, 344, 422, 539, 878, 903, 1057, 1371
MfeI	CAATTG	2 cut(s)	360, 976
MhlI	GDGCHC	5 cut(s)	167, 297, 559, 812, 1004
MlsI	TGGCCA	1 cut(s)	584
MluNI	TGGCCA	1 cut(s)	584
Mly113I	GGCGCC	1 cut(s)	506
MlyI	GAGTC	2 cut(s)	796, 1199
MmeI	TCCRAC	1 cut(s)	810
Mox20I	TGGCCA	1 cut(s)	584
Mph1103I	ATGCAT	1 cut(s)	1447
MscI	TGGCCA	1 cut(s)	584
MseI	TTAA	5 cut(s)	384, 777, 1359, 1373, 1450
MslI	CAYNNNNRTG	2 cut(s)	401, 494
Msp20I	TGGCCA	1 cut(s)	584
MspA1I	CMGCKG	1 cut(s)	39
MspCI	CTTAAG	1 cut(s)	1358
MspI	CCGG	9 cut(s)	81, 252, 486, 494, 509, 608, 640, 654, 665
MspR9I	CCNGG	2 cut(s)	252, 604
MunI	CAATTG	2 cut(s)	360, 976
MvaI	CCWGG	1 cut(s)	604
MvnI	CGCG	3 cut(s)	39, 95, 522
MwoI	GCNNNNNNNGC	4 cut(s)	71, 139, 763, 1100
NarI	GGCGCC	1 cut(s)	506
NciI	CCSGG	1 cut(s)	252
NdeII	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
NlaIII	CATG	7 cut(s)	176, 241, 287, 464, 505, 729, 1417
NlaIV	GGNNCC	2 cut(s)	43, 507
NmeAIII	GCCGAG	1 cut(s)	133
NmuCI	GTSAC	3 cut(s)	377, 617, 656
NsiI	ATGCAT	1 cut(s)	1447
NspI	RCATGY	1 cut(s)	729
NspV	TTCGAA	1 cut(s)	686
OliI	CACNNNNGTG	1 cut(s)	494
PaeR7I	CTCGAG	1 cut(s)	296
PceI	AGGCCT	1 cut(s)	840
PciSI	GCTCTTC	2 cut(s)	522, 1040
PcsI	WCGNNNNNNNCGW	2 cut(s)	122, 1254
PfeI	GAWTC	7 cut(s)	274, 648, 848, 880, 1115, 1172, 1250
PflMI	CCANNNNNTGG	1 cut(s)	334
PkrI	GCNGC	4 cut(s)	38, 41, 144, 257
Ple19I	CGATCG	1 cut(s)	33
PleI	GAGTC	2 cut(s)	796, 1198
PluTI	GGCGCC	1 cut(s)	509
PpsI	GAGTC	2 cut(s)	796, 1198
Ppu21I	YACGTR	1 cut(s)	247
Psp124BI	GAGCTC	3 cut(s)	167, 297, 812
Psp6I	CCWGG	1 cut(s)	602
PspGI	CCWGG	1 cut(s)	602
PspN4I	GGNNCC	2 cut(s)	43, 507
PspPI	GGNCC	1 cut(s)	23
PspXI	VCTCGAGB	1 cut(s)	296
PvuI	CGATCG	1 cut(s)	33
RsaI	GTAC	7 cut(s)	185, 227, 245, 249, 568, 949, 1404
RsaNI	GTAC	7 cut(s)	184, 226, 244, 248, 567, 948, 1403
RseI	CAYNNNNRTG	2 cut(s)	401, 494
SacI	GAGCTC	3 cut(s)	167, 297, 812
SacII	CCGCGG	1 cut(s)	40
SapI	GCTCTTC	2 cut(s)	522, 1040
SaqAI	TTAA	5 cut(s)	384, 777, 1359, 1373, 1450
SatI	GCNGC	4 cut(s)	37, 40, 143, 256
Sau3AI	GATC	8 cut(s)	30, 309, 423, 436, 832, 927, 939, 1420
Sau96I	GGNCC	1 cut(s)	23
ScaI	AGTACT	1 cut(s)	185
SchI	GAGTC	2 cut(s)	796, 1199
ScrFI	CCNGG	2 cut(s)	252, 604
SduI	GDGCHC	5 cut(s)	167, 297, 559, 812, 1004
SfaNI	GCATC	4 cut(s)	259, 476, 775, 1112
SfcI	CTRYAG	1 cut(s)	1432
SfoI	GGCGCC	1 cut(s)	507
Sfr274I	CTCGAG	1 cut(s)	296
Sfr303I	CCGCGG	1 cut(s)	40
SfuI	TTCGAA	1 cut(s)	686
SgrAI	CRCCGGYG	1 cut(s)	493
SgrBI	CCGCGG	1 cut(s)	40
SinI	GGWCC	1 cut(s)	23
SlaI	CTCGAG	1 cut(s)	296
SmiMI	CAYNNNNRTG	2 cut(s)	401, 494
SmlI	CTYRAG	4 cut(s)	296, 706, 761, 1358
SmoI	CTYRAG	4 cut(s)	296, 706, 761, 1358
SnaBI	TACGTA	1 cut(s)	247
SseBI	AGGCCT	1 cut(s)	840
SsiI	CCGC	8 cut(s)	37, 39, 48, 95, 255, 522, 630, 917
SspDI	GGCGCC	1 cut(s)	505
SspMI	CTAG	2 cut(s)	18, 62
SstI	GAGCTC	3 cut(s)	167, 297, 812
StuI	AGGCCT	1 cut(s)	840
StyD4I	CCNGG	2 cut(s)	250, 602
TaaI	ACNGT	5 cut(s)	55, 1006, 1099, 1142, 1199
TaiI	ACGT	3 cut(s)	249, 476, 1151
TaqI	TCGA	2 cut(s)	297, 686
TatI	WGTACW	3 cut(s)	183, 225, 566
TauI	GCSGC	3 cut(s)	39, 42, 258
TfiI	GAWTC	7 cut(s)	274, 648, 848, 880, 1115, 1172, 1250
Tru1I	TTAA	5 cut(s)	384, 777, 1359, 1373, 1450
Tru9I	TTAA	5 cut(s)	384, 777, 1359, 1373, 1450
TscAI	CASTG	3 cut(s)	211, 1009, 1216
TseFI	GTSAC	3 cut(s)	377, 617, 656
TseI	GCWGC	1 cut(s)	142
Tsp45I	GTSAC	3 cut(s)	377, 617, 656
TspDTI	ATGAA	6 cut(s)	226, 344, 477, 490, 840, 1221
TspRI	CASTG	3 cut(s)	211, 1009, 1216
Van91I	CCANNNNNTGG	1 cut(s)	334
Vha464I	CTTAAG	1 cut(s)	1358
VneI	GTGCAC	1 cut(s)	1000
VpaK11BI	GGWCC	1 cut(s)	23
XapI	RAATTY	1 cut(s)	983
XceI	RCATGY	1 cut(s)	729
XcmI	CCANNNNNNNNNTGG	1 cut(s)	738
XhoI	CTCGAG	1 cut(s)	296
XmiI	GTMKAC	2 cut(s)	797, 970
XspI	CTAG	2 cut(s)	18, 62
ZrmI	AGTACT	1 cut(s)	185
Zsp2I	ATGCAT	1 cut(s)	1447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.