Rh5DG573200

Lysyl-tRNA synthetase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0012016
Physical Location & Seq
Forward (+)
88053092 .. 88057687
4596 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG573200.1

Sequence Viewer

Length: 1752 bp
ATGGATGCGGTGAGGCTATGGAGCCTATCCTCGCAGCCATTGAAGCACCTCATTCGTACCACCACCACTAGACTTGTCATCCGCTGCTGCTCTTCAACCACAACCGCCACCAACCCCGGCGGTCGTGCCCCCAAAGCCGGCGGCCGCAACCGCCGCTTGTCCACATCATCAACCTCCACCTCCGACAGAGACGCTGTTCGAGCCATTCGCTTAAAGAAGGTAGAAGAGTTGAGGAGCAAAGGTTTGGAGCCATATGGTTATGGGTGGGAAAGGACTCATTCTGCTAATCAGCTGCAAGATATATACAAGCATTTAGGGAATGGTGAAGAGTCCAAACCCGACAAAGATGGTGTCTCAATTGCAGGAAGAATTGTGGCTCGCAGAGCTTTTGGAAAGCTTGCATTTTTGACACTCAGGGACGATTCCGGAACTATTCAGCTTTACTGTGAGAAGGAACGGCTCGCAGATGATCAATTTGACCAGTTAAAGTCCCTTGTTGATATTGGTGATATAGTTGGTGCTAATGGATCCATCAAGCGGACAGAGAAAGGGGAGCTGTCTGTTTATGTAAATTCCTTTGCAATTCTTACAAAATCTCTACTCCCGCTGCCAGACAAATATCATGGTCTAACAGATGTGGACAAGCGCTACCGTCAACGGTATGTAGATATGATTGCAAATCCTGAGGTAGCTGATGTATTCCGGAAAAGAGCAAAGGTTGTATCAGAGATACGCAAGACGGTTGAATCTTTCGGGTTTATCGAAGTTGAAACTCCAGTTCTGCAGGGAGCAGCTGGTGGGGCAGAGGCTAGGCCATTTGTTACATACCATAATTCACTTGGAAGGGACCTGTATTTGAGAATAGCGACCGAGCTCCACTTAAAGAGAATGCTGGTTGGGGGGTTTGAGAAGGTGTACGAGATTGGACGAATATTCAGGAATGAAGGCATTTCAACTCGTCATAATCCTGAGTTCACCACTATAGAGATGTATGAAGCATATTCAGACTATGAAAGCATGATGAACATGACAGAGGAAATTGTTACACGATGTGCACTTGCAGTTCATGGGAAGCTTACCCTTGATTACCAGGGGGTGGAGATACATCTTGAGCGACCTTGGAGGAGGGAAACCATGCACAATCTTGTAAAAGAAGGCACTGGGATTACTTTCAATGAGTTAGGCAATGATCTTCAAGTTGCTAAAGAAGTTACTCTGAAGAACCTAGGAGCTGACCTTGATTACAAATACAAATCTTCTATTGAAGCATGCTCATCTGTTGGCCACCTTCTTAATGAGGTTTTTGAGATTATTGTTGAACCAAAGCTTGTGCAACCCACATTTGTTTTAGACTATCCTATTGAGATATCTCCTCTGGCCAAGCCACATCGGAGGCATGTAGGGTTGACTGAGAGGTTTGAACTTTTTGTATGTGGTCGTGAGCTGGCCAATGCTTTTTCTGAATTGACCGATCCTATGGATCAGAGAGGGCGACTAGAAGAGCAAGTAAGGCAGCACAATGAGAAGAGAGCAGCAGCTATTTCAGAAATAGGTGGTGCAGAAGATAAAAGAGAGGAAAATGATGAGTCATATGAAGTGACTCTTGATGATGATTTCCTTACAGCTTTGGAATATGGGATGCCTCCAGCTTCAGGAATGGGACTTGGAATTGATAGGCTAGTCATGCTTTTAACGAACTCCGCCAGCATCAGAGATGTAATTGCCTTCCCAGTGCTAAAAATCCAGCAATAG

Protein Analysis

583

Amino Acids

65.62

Weight (kDa)

6.22

Isoelectric Point (pI)

38.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA_anti-codon PF01336 118 - 195 8.1e-18 OB-fold nucleic acid binding domain
tRNA-synt_2 PF00152 213 - 578 7.3e-83 tRNA synthetases class II (D, K and N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012016)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13490
fragaria_vesca FvH4_3g45770 FvH4_3g45770
malus_domestica MD03G1003300.v1.1 MD11G1003100.v1.1
prunus_persica Prupe.6G002900_v2.0.a1
pyrus_communis pycom11g00280
rosa_chinensis RchiOBHm_Chr5g0083841
rosa_laevigata RLG00000037057
rosa_multiflora Rmu_sc0001287.1_g000040 Rmu_sc0024007.1_g000006
rosa_roxburghii Rroxscaffold_1G00000750
rosa_rugosa Rorug05G0486400 Rorug05G0486500
rosa_samantha Rh5AG539600 Rh5BG564700 Rh5CG586600 Rh5DG573200
rosa_wichuraiana Rw5G050170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1096
AccIII TCCGGA 2 cut(s) 425, 702
AclWI GGATC 4 cut(s) 522, 535, 1466, 1488
AcoI YGGCCR 4 cut(s) 142, 1282, 1377, 1446
AcsI RAATTY 1 cut(s) 571
AcuI CTGAAG 2 cut(s) 1238, 1635
AdeI CACNNNGTG 1 cut(s) 1052
AfaI GTAC 2 cut(s) 58, 917
AfeI AGCGCT 1 cut(s) 647
AfiI CCNNNNNNNGG 4 cut(s) 137, 537, 1096, 1652
AjnI CCWGG 1 cut(s) 1089
Alw21I GWGCWC 2 cut(s) 876, 1057
Alw26I GTCTC 2 cut(s) 183, 358
Alw44I GTGCAC 1 cut(s) 1053
AlwI GGATC 4 cut(s) 522, 535, 1466, 1488
Aor13HI TCCGGA 2 cut(s) 425, 702
Aor51HI AGCGCT 1 cut(s) 647
AoxI GGCC 5 cut(s) 142, 812, 1282, 1377, 1446
ApaLI GTGCAC 1 cut(s) 1053
ApeKI GCWGC 9 cut(s) 34, 84, 87, 292, 607, 791, 1513, 1532, 1535
ApoI RAATTY 1 cut(s) 571
ArsI GACNNNNNNTTYG 2 cut(s) 336, 368
AspA2I CCTAGG 1 cut(s) 1225
AspLEI GCGC 1 cut(s) 648
AspS9I GGNCC 1 cut(s) 847
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 4 cut(s) 22, 335, 518, 967
AvaII GGWCC 1 cut(s) 847
AvrII CCTAGG 1 cut(s) 1225
AxyI CCTNAGG 1 cut(s) 684
BaeGI GKGCMC 2 cut(s) 130, 1057
BalI TGGCCA 3 cut(s) 1284, 1379, 1448
BamHI GGATCC 1 cut(s) 527
BanII GRGCYC 1 cut(s) 876
Bbv12I GWGCWC 2 cut(s) 876, 1057
BbvI GCAGC 9 cut(s) 46, 71, 74, 279, 594, 803, 1525, 1544, 1547
BccI CCATC 2 cut(s) 341, 539
BceAI ACGGC 1 cut(s) 473
BcgI CGANNNNNNTGC 2 cut(s) 35, 69
BciT130I CCWGG 1 cut(s) 1091
BclI TGATCA 1 cut(s) 469
BcnI CCSGG 1 cut(s) 117
BcoDI GTCTC 2 cut(s) 183, 358
BfaI CTAG 5 cut(s) 69, 810, 1226, 1496, 1679
BfmI CTRYAG 2 cut(s) 782, 981
BfoI RGCGCY 1 cut(s) 649
BlnI CCTAGG 1 cut(s) 1225
Bme1390I CCNGG 2 cut(s) 117, 1091
Bme18I GGWCC 1 cut(s) 847
BmgT120I GGNCC 1 cut(s) 847
BmiI GGNNCC 4 cut(s) 23, 249, 529, 848
BmrFI CCNGG 2 cut(s) 117, 1091
BmrI ACTGGG 2 cut(s) 1170, 1724
BmsI GCATC 2 cut(s) 1629, 1716
BmuI ACTGGG 2 cut(s) 1170, 1724
BpmI CTGGAG 2 cut(s) 759, 1629
BpuEI CTTGAG 1 cut(s) 1130
BpuMI CCSGG 1 cut(s) 117
BsaJI CCNNGG 4 cut(s) 115, 1090, 1118, 1225
BsaWI WCCGGW 2 cut(s) 425, 702
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 537, 1096, 1652
Bse118I RCCGGY 1 cut(s) 137
Bse1I ACTGG 4 cut(s) 481, 776, 1165, 1730
Bse21I CCTNAGG 1 cut(s) 684
Bse3DI GCAATG 1 cut(s) 1192
BseAI TCCGGA 2 cut(s) 425, 702
BseBI CCWGG 1 cut(s) 1091
BseDI CCNNGG 4 cut(s) 115, 1090, 1118, 1225
BseGI GGATG 3 cut(s) 10, 78, 1644
BseLI CCNNNNNNNGG 4 cut(s) 137, 537, 1096, 1652
BseMI GCAATG 1 cut(s) 1192
BseMII CTCAG 4 cut(s) 427, 675, 960, 1401
BseNI ACTGG 4 cut(s) 481, 776, 1165, 1730
BseRI GAGGAG 3 cut(s) 247, 1138, 1362
BseSI GKGCMC 2 cut(s) 130, 1057
BseX3I CGGCCG 1 cut(s) 142
BseXI GCAGC 9 cut(s) 46, 71, 74, 279, 594, 803, 1525, 1544, 1547
BsgI GTGCAG 1 cut(s) 1578
Bsh1285I CGRYCG 3 cut(s) 124, 145, 870
BshFI GGCC 5 cut(s) 144, 814, 1284, 1379, 1448
BsiEI CGRYCG 3 cut(s) 124, 145, 870
BsiHKAI GWGCWC 2 cut(s) 876, 1057
BsiSI CCGG 4 cut(s) 117, 138, 426, 703
BslFI GGGAC 4 cut(s) 431, 475, 860, 1674
BslI CCNNNNNNNGG 4 cut(s) 137, 537, 1096, 1652
BsmAI GTCTC 2 cut(s) 183, 358
BsmBI CGTCTC 1 cut(s) 183
BsmFI GGGAC 4 cut(s) 431, 475, 860, 1674
BsmI GAATGC 1 cut(s) 894
BsnI GGCC 5 cut(s) 144, 814, 1284, 1379, 1448
Bsp1286I GDGCHC 3 cut(s) 130, 876, 1057
Bsp13I TCCGGA 2 cut(s) 425, 702
Bsp143I GATC 5 cut(s) 469, 527, 1189, 1471, 1480
BspANI GGCC 5 cut(s) 144, 814, 1284, 1379, 1448
BspCNI CTCAG 4 cut(s) 426, 676, 961, 1402
BspEI TCCGGA 2 cut(s) 425, 702
BspLI GGNNCC 4 cut(s) 23, 249, 529, 848
BspMAI CTGCAG 1 cut(s) 786
BspPI GGATC 4 cut(s) 522, 535, 1466, 1488
BspQI GCTCTTC 2 cut(s) 97, 1494
BsrDI GCAATG 1 cut(s) 1192
BsrFI RCCGGY 1 cut(s) 137
BsrI ACTGG 4 cut(s) 481, 776, 1165, 1730
BssAI RCCGGY 1 cut(s) 137
BssECI CCNNGG 4 cut(s) 115, 1090, 1118, 1225
BssMI GATC 5 cut(s) 469, 527, 1189, 1471, 1480
BssT1I CCWWGG 2 cut(s) 1118, 1225
Bst2UI CCWGG 1 cut(s) 1091
Bst4CI ACNGT 4 cut(s) 446, 653, 660, 742
Bst6I CTCTTC 5 cut(s) 97, 219, 321, 1494, 1520
BstC8I GCNNGC 7 cut(s) 139, 379, 399, 462, 1270, 1446, 1705
BstDEI CTNAG 4 cut(s) 413, 684, 969, 1410
BstF5I GGATG 3 cut(s) 10, 78, 1644
BstH2I RGCGCY 1 cut(s) 649
BstHHI GCGC 1 cut(s) 648
BstKTI GATC 5 cut(s) 472, 530, 1192, 1474, 1483
BstMAI GTCTC 2 cut(s) 183, 358
BstMBI GATC 5 cut(s) 469, 527, 1189, 1471, 1480
BstMCI CGRYCG 3 cut(s) 124, 145, 870
BstMWI GCNNNNNNNGC 9 cut(s) 43, 134, 150, 153, 200, 383, 800, 1510, 1684
BstNI CCWGG 1 cut(s) 1091
BstNSI RCATGY 2 cut(s) 1272, 1400
BstSCI CCNGG 2 cut(s) 115, 1089
BstSFI CTRYAG 2 cut(s) 782, 981
BstSLI GKGCMC 2 cut(s) 130, 1057
BstV1I GCAGC 9 cut(s) 46, 71, 74, 279, 594, 803, 1525, 1544, 1547
BstX2I RGATCY 1 cut(s) 527
BstYI RGATCY 1 cut(s) 527
BstZI CGGCCG 1 cut(s) 142
Bsu36I CCTNAGG 1 cut(s) 684
BsuRI GGCC 5 cut(s) 144, 814, 1284, 1379, 1448
BtsCI GGATG 3 cut(s) 10, 78, 1644
BtsIMutI CAGTG 2 cut(s) 1158, 1737
Cac8I GCNNGC 7 cut(s) 139, 379, 399, 462, 1270, 1446, 1705
CciNI GCGGCCGC 1 cut(s) 142
CfoI GCGC 1 cut(s) 648
Cfr10I RCCGGY 1 cut(s) 137
Cfr13I GGNCC 1 cut(s) 847
CseI GACGC 1 cut(s) 200
Csp6I GTAC 2 cut(s) 57, 916
CspCI CAANNNNNGTGG 2 cut(s) 55, 90
CviAII CATG 8 cut(s) 623, 1018, 1027, 1067, 1135, 1269, 1397, 1684
CviQI GTAC 2 cut(s) 57, 916
DdeI CTNAG 4 cut(s) 413, 684, 969, 1410
DpnI GATC 5 cut(s) 471, 529, 1191, 1473, 1482
DpnII GATC 5 cut(s) 469, 527, 1189, 1471, 1480
DraIII CACNNNGTG 1 cut(s) 1052
EaeI YGGCCR 4 cut(s) 142, 1282, 1377, 1446
EagI CGGCCG 1 cut(s) 142
Eam1104I CTCTTC 5 cut(s) 97, 219, 321, 1494, 1520
EarI CTCTTC 5 cut(s) 97, 219, 321, 1494, 1520
EciI GGCGGA 1 cut(s) 1690
Ecl136II GAGCTC 1 cut(s) 874
EclXI CGGCCG 1 cut(s) 142
Eco130I CCWWGG 2 cut(s) 1118, 1225
Eco24I GRGCYC 1 cut(s) 876
Eco32I GATATC 1 cut(s) 1368
Eco47I GGWCC 1 cut(s) 847
Eco47III AGCGCT 1 cut(s) 647
Eco52I CGGCCG 1 cut(s) 142
Eco53kI GAGCTC 1 cut(s) 874
Eco57I CTGAAG 2 cut(s) 1238, 1635
Eco81I CCTNAGG 1 cut(s) 684
EcoICRI GAGCTC 1 cut(s) 874
EcoO109I RGGNCCY 1 cut(s) 847
EcoRII CCWGG 1 cut(s) 1089
EcoRV GATATC 1 cut(s) 1368
EcoT14I CCWWGG 2 cut(s) 1118, 1225
EcoT38I GRGCYC 1 cut(s) 876
ErhI CCWWGG 2 cut(s) 1118, 1225
Esp3I CGTCTC 1 cut(s) 183
FaeI CATG 8 cut(s) 626, 1021, 1030, 1070, 1138, 1272, 1400, 1687
FalI AAGNNNNNCTT 2 cut(s) 1587, 1619
FaqI GGGAC 4 cut(s) 431, 475, 860, 1674
FatI CATG 8 cut(s) 622, 1017, 1026, 1066, 1134, 1268, 1396, 1683
FauI CCCGC 1 cut(s) 612
FauNDI CATATG 2 cut(s) 253, 1591
FbaI TGATCA 1 cut(s) 469
FokI GGATG 3 cut(s) 17, 65, 1651
FriOI GRGCYC 1 cut(s) 876
FspBI CTAG 5 cut(s) 69, 810, 1226, 1496, 1679
GlaI GCGC 1 cut(s) 647
GsuI CTGGAG 2 cut(s) 759, 1629
HaeII RGCGCY 1 cut(s) 649
HaeIII GGCC 5 cut(s) 144, 814, 1284, 1379, 1448
HapII CCGG 4 cut(s) 117, 138, 426, 703
HgaI GACGC 1 cut(s) 200
HhaI GCGC 1 cut(s) 648
Hin1II CATG 8 cut(s) 626, 1021, 1030, 1070, 1138, 1272, 1400, 1687
Hin6I GCGC 1 cut(s) 646
HinP1I GCGC 1 cut(s) 646
HincII GTYRAC 2 cut(s) 656, 1407
HindII GTYRAC 2 cut(s) 656, 1407
HindIII AAGCTT 3 cut(s) 395, 1073, 1325
HinfI GANTC 6 cut(s) 274, 329, 422, 746, 1586, 1600
HpaII CCGG 4 cut(s) 117, 138, 426, 703
HphI GGTGA 4 cut(s) 22, 335, 518, 967
Hpy166II GTNNAC 7 cut(s) 162, 640, 656, 916, 975, 1055, 1407
Hpy188I TCNGA 9 cut(s) 184, 727, 1006, 1218, 1392, 1462, 1485, 1546, 1712
Hpy188III TCNNGA 9 cut(s) 426, 683, 703, 937, 968, 1109, 1439, 1604, 1653
Hpy8I GTNNAC 7 cut(s) 162, 640, 656, 916, 975, 1055, 1407
HpyAV CCTTC 8 cut(s) 211, 445, 837, 904, 938, 1148, 1298, 1735
HpyCH4III ACNGT 4 cut(s) 446, 653, 660, 742
HpyF10VI GCNNNNNNNGC 9 cut(s) 43, 134, 150, 153, 200, 383, 800, 1510, 1684
HpyF3I CTNAG 4 cut(s) 413, 684, 969, 1410
Hsp92II CATG 8 cut(s) 626, 1021, 1030, 1070, 1138, 1272, 1400, 1687
HspAI GCGC 1 cut(s) 646
Kpn2I TCCGGA 2 cut(s) 425, 702
KroI GCCGGC 1 cut(s) 137
KroNI GCCGGC 1 cut(s) 139
Ksp22I TGATCA 1 cut(s) 469
Kzo9I GATC 5 cut(s) 469, 527, 1189, 1471, 1480
LguI GCTCTTC 2 cut(s) 97, 1494
LmnI GCTCC 7 cut(s) 21, 234, 247, 553, 788, 879, 1229
Lsp1109I GCAGC 9 cut(s) 46, 71, 74, 279, 594, 803, 1525, 1544, 1547
LweI GCATC 2 cut(s) 1629, 1716
MaeI CTAG 5 cut(s) 69, 810, 1226, 1496, 1679
MaeIII GTNAC 4 cut(s) 820, 1042, 1210, 1597
MalI GATC 5 cut(s) 471, 529, 1191, 1473, 1482
MboI GATC 5 cut(s) 469, 527, 1189, 1471, 1480
MfeI CAATTG 1 cut(s) 357
MflI RGATCY 1 cut(s) 527
MhlI GDGCHC 3 cut(s) 130, 876, 1057
MlsI TGGCCA 3 cut(s) 1284, 1379, 1448
MluNI TGGCCA 3 cut(s) 1284, 1379, 1448
MlyI GAGTC 4 cut(s) 268, 338, 1594, 1595
MmeI TCCRAC 1 cut(s) 207
Mox20I TGGCCA 3 cut(s) 1284, 1379, 1448
MroI TCCGGA 2 cut(s) 425, 702
MroNI GCCGGC 1 cut(s) 137
MscI TGGCCA 3 cut(s) 1284, 1379, 1448
MseI TTAA 5 cut(s) 212, 485, 881, 1293, 1691
Msp20I TGGCCA 3 cut(s) 1284, 1379, 1448
MspA1I CMGCKG 4 cut(s) 84, 292, 607, 794
MspI CCGG 4 cut(s) 117, 138, 426, 703
MspR9I CCNGG 2 cut(s) 117, 1091
MunI CAATTG 1 cut(s) 357
Mva1269I GAATGC 1 cut(s) 894
MvaI CCWGG 1 cut(s) 1091
MwoI GCNNNNNNNGC 9 cut(s) 43, 134, 150, 153, 200, 383, 800, 1510, 1684
NaeI GCCGGC 1 cut(s) 139
NciI CCSGG 1 cut(s) 117
NdeI CATATG 2 cut(s) 253, 1591
NdeII GATC 5 cut(s) 469, 527, 1189, 1471, 1480
NgoMIV GCCGGC 1 cut(s) 137
NlaIII CATG 8 cut(s) 626, 1021, 1030, 1070, 1138, 1272, 1400, 1687
NlaIV GGNNCC 4 cut(s) 23, 249, 529, 848
NmuCI GTSAC 1 cut(s) 1597
NotI GCGGCCGC 1 cut(s) 142
NspI RCATGY 2 cut(s) 1272, 1400
PaeI GCATGC 1 cut(s) 1272
PciSI GCTCTTC 2 cut(s) 97, 1494
PcsI WCGNNNNNNNCGW 1 cut(s) 759
PctI GAATGC 1 cut(s) 894
PdiI GCCGGC 1 cut(s) 139
PfeI GAWTC 2 cut(s) 422, 746
PflMI CCANNNNNTGG 1 cut(s) 1096
PleI GAGTC 4 cut(s) 268, 337, 1594, 1594
PpsI GAGTC 4 cut(s) 268, 337, 1594, 1594
PpuMI RGGWCCY 1 cut(s) 847
Psp124BI GAGCTC 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 847
Psp6I CCWGG 1 cut(s) 1089
PspGI CCWGG 1 cut(s) 1089
PspN4I GGNNCC 4 cut(s) 23, 249, 529, 848
PspPI GGNCC 1 cut(s) 847
PspPPI RGGWCCY 1 cut(s) 847
PstI CTGCAG 1 cut(s) 786
PsuI RGATCY 1 cut(s) 527
PvuII CAGCTG 2 cut(s) 292, 794
RsaI GTAC 2 cut(s) 58, 917
RsaNI GTAC 2 cut(s) 57, 916
SacI GAGCTC 1 cut(s) 876
SapI GCTCTTC 2 cut(s) 97, 1494
SaqAI TTAA 5 cut(s) 212, 485, 881, 1293, 1691
Sau3AI GATC 5 cut(s) 469, 527, 1189, 1471, 1480
Sau96I GGNCC 1 cut(s) 847
SchI GAGTC 4 cut(s) 268, 338, 1594, 1595
ScrFI CCNGG 2 cut(s) 117, 1091
SduI GDGCHC 3 cut(s) 130, 876, 1057
SfaNI GCATC 2 cut(s) 1629, 1716
SfcI CTRYAG 2 cut(s) 782, 981
SinI GGWCC 1 cut(s) 847
SmlI CTYRAG 1 cut(s) 1109
SmoI CTYRAG 1 cut(s) 1109
SphI GCATGC 1 cut(s) 1272
SspI AATATT 1 cut(s) 933
SspMI CTAG 5 cut(s) 69, 810, 1226, 1496, 1679
SstI GAGCTC 1 cut(s) 876
StyD4I CCNGG 2 cut(s) 115, 1089
StyI CCWWGG 2 cut(s) 1118, 1225
TaaI ACNGT 4 cut(s) 446, 653, 660, 742
TaqI TCGA 2 cut(s) 199, 762
TaqII GACCGA 2 cut(s) 884, 1484
TauI GCSGC 3 cut(s) 144, 147, 156
TfiI GAWTC 2 cut(s) 422, 746
Tru1I TTAA 5 cut(s) 212, 485, 881, 1293, 1691
Tru9I TTAA 5 cut(s) 212, 485, 881, 1293, 1691
TscAI CASTG 2 cut(s) 1165, 1737
TseFI GTSAC 1 cut(s) 1597
TseI GCWGC 9 cut(s) 34, 84, 87, 292, 607, 791, 1513, 1532, 1535
Tsp45I GTSAC 1 cut(s) 1597
TspDTI ATGAA 6 cut(s) 957, 1008, 1026, 1037, 1055, 1608
TspRI CASTG 2 cut(s) 1165, 1737
Van91I CCANNNNNTGG 1 cut(s) 1096
VneI GTGCAC 1 cut(s) 1053
VpaK11BI GGWCC 1 cut(s) 847
XapI RAATTY 1 cut(s) 571
XceI RCATGY 2 cut(s) 1272, 1400
XcmI CCANNNNNNNNNTGG 1 cut(s) 836
XmaJI CCTAGG 1 cut(s) 1225
XspI CTAG 5 cut(s) 69, 810, 1226, 1496, 1679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.