Small nuclear RNA activating complex (SNAPc), subunit SNAP43
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0296211 |
| rosa_roxburghii | Rroxscaffold_7G00178320 |
| rosa_samantha | Rh6AG371700 Rh6BG379600 Rh6CG384900 Rh6DG372100 |
| rosa_wichuraiana | Rw6G032390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 99 |
| AjiI | CACGTC | 1 cut(s) | 50 |
| AluBI | AGCT | 3 cut(s) | 166, 259, 265 |
| AluI | AGCT | 3 cut(s) | 166, 259, 265 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 3 cut(s) | 259, 262, 265 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 222 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| BbsI | GAAGAC | 2 cut(s) | 138, 279 |
| BbvI | GCAGC | 3 cut(s) | 246, 252, 274 |
| BccI | CCATC | 2 cut(s) | 61, 163 |
| BfaI | CTAG | 1 cut(s) | 195 |
| BfmI | CTRYAG | 2 cut(s) | 260, 266 |
| BisI | GCNGC | 3 cut(s) | 260, 263, 266 |
| BlsI | GCNGC | 3 cut(s) | 261, 264, 267 |
| BmgBI | CACGTC | 1 cut(s) | 50 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 196 |
| BpiI | GAAGAC | 2 cut(s) | 138, 279 |
| BpmI | CTGGAG | 1 cut(s) | 314 |
| Bse3DI | GCAATG | 1 cut(s) | 147 |
| BseGI | GGATG | 1 cut(s) | 211 |
| BseMI | GCAATG | 1 cut(s) | 147 |
| BseRI | GAGGAG | 1 cut(s) | 200 |
| BseXI | GCAGC | 3 cut(s) | 246, 252, 274 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bsp143I | GATC | 1 cut(s) | 289 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspMAI | CTGCAG | 2 cut(s) | 264, 270 |
| BsrDI | GCAATG | 1 cut(s) | 147 |
| BssMI | GATC | 1 cut(s) | 289 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 1 cut(s) | 81 |
| BstF5I | GGATG | 1 cut(s) | 211 |
| BstKTI | GATC | 1 cut(s) | 292 |
| BstMBI | GATC | 1 cut(s) | 289 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 89, 265 |
| BstSFI | CTRYAG | 2 cut(s) | 260, 266 |
| BstV1I | GCAGC | 3 cut(s) | 246, 252, 274 |
| BstV2I | GAAGAC | 2 cut(s) | 138, 279 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BtrI | CACGTC | 1 cut(s) | 50 |
| BtsCI | GGATG | 1 cut(s) | 211 |
| Cac8I | GCNNGC | 1 cut(s) | 81 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CviAII | CATG | 1 cut(s) | 321 |
| CviJI | RGCY | 4 cut(s) | 68, 166, 259, 265 |
| CviKI_1 | RGCY | 4 cut(s) | 68, 166, 259, 265 |
| DpnI | GATC | 1 cut(s) | 291 |
| DpnII | GATC | 1 cut(s) | 289 |
| FaeI | CATG | 1 cut(s) | 324 |
| FaiI | YATR | 5 cut(s) | 13, 77, 90, 137, 322 |
| FatI | CATG | 1 cut(s) | 320 |
| Fnu4HI | GCNGC | 3 cut(s) | 260, 263, 266 |
| FokI | GGATG | 1 cut(s) | 218 |
| Fsp4HI | GCNGC | 3 cut(s) | 260, 263, 266 |
| FspBI | CTAG | 1 cut(s) | 195 |
| GluI | GCNGC | 3 cut(s) | 260, 263, 266 |
| GsuI | CTGGAG | 1 cut(s) | 314 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| Hin1II | CATG | 1 cut(s) | 324 |
| Hpy188I | TCNGA | 1 cut(s) | 316 |
| Hpy188III | TCNNGA | 1 cut(s) | 293 |
| HpyCH4IV | ACGT | 1 cut(s) | 49 |
| HpyCH4V | TGCA | 5 cut(s) | 79, 152, 247, 262, 268 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 89, 265 |
| HpySE526I | ACGT | 1 cut(s) | 49 |
| Hsp92II | CATG | 1 cut(s) | 324 |
| Kzo9I | GATC | 1 cut(s) | 289 |
| LpnPI | CCDG | 3 cut(s) | 222, 254, 278 |
| Lsp1109I | GCAGC | 3 cut(s) | 246, 252, 274 |
| LweI | GCATC | 1 cut(s) | 196 |
| MaeI | CTAG | 1 cut(s) | 195 |
| MaeII | ACGT | 1 cut(s) | 49 |
| MalI | GATC | 1 cut(s) | 291 |
| MboI | GATC | 1 cut(s) | 289 |
| MboII | GAAGA | 3 cut(s) | 16, 143, 284 |
| MmeI | TCCRAC | 1 cut(s) | 279 |
| MnlI | CCTC | 5 cut(s) | 37, 42, 80, 97, 178 |
| MroXI | GAANNNNTTC | 1 cut(s) | 222 |
| MseI | TTAA | 1 cut(s) | 18 |
| MslI | CAYNNNNRTG | 1 cut(s) | 99 |
| MspA1I | CMGCKG | 2 cut(s) | 259, 265 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 89, 265 |
| NdeII | GATC | 1 cut(s) | 289 |
| NlaIII | CATG | 1 cut(s) | 324 |
| PdmI | GAANNNNTTC | 1 cut(s) | 222 |
| PkrI | GCNGC | 3 cut(s) | 261, 264, 267 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PstI | CTGCAG | 2 cut(s) | 264, 270 |
| PvuII | CAGCTG | 2 cut(s) | 259, 265 |
| RseI | CAYNNNNRTG | 1 cut(s) | 99 |
| SaqAI | TTAA | 1 cut(s) | 18 |
| SatI | GCNGC | 3 cut(s) | 260, 263, 266 |
| Sau3AI | GATC | 1 cut(s) | 289 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 5 cut(s) | 52, 168, 261, 267, 287 |
| SfaNI | GCATC | 1 cut(s) | 196 |
| SfcI | CTRYAG | 2 cut(s) | 260, 266 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 99 |
| SspMI | CTAG | 1 cut(s) | 195 |
| TaiI | ACGT | 1 cut(s) | 52 |
| TaqI | TCGA | 1 cut(s) | 42 |
| Tru1I | TTAA | 1 cut(s) | 18 |
| Tru9I | TTAA | 1 cut(s) | 18 |
| TseI | GCWGC | 3 cut(s) | 259, 262, 265 |
| TspDTI | ATGAA | 3 cut(s) | 17, 144, 215 |
| XmnI | GAANNNNTTC | 1 cut(s) | 222 |
| XspI | CTAG | 1 cut(s) | 195 |