Small nuclear RNA activating complex (SNAPc), subunit SNAP43
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0296211 |
| rosa_roxburghii | Rroxscaffold_7G00178320 |
| rosa_samantha | Rh6AG371700 Rh6BG379600 Rh6CG384900 Rh6DG372100 |
| rosa_wichuraiana | Rw6G032390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AflIII | ACRYGT | 1 cut(s) | 36 |
| AgsI | TTSAA | 2 cut(s) | 99, 195 |
| AjiI | CACGTC | 1 cut(s) | 50 |
| AluBI | AGCT | 3 cut(s) | 208, 301, 307 |
| AluI | AGCT | 3 cut(s) | 208, 301, 307 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 3 cut(s) | 301, 304, 307 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 264 |
| AspLEI | GCGC | 1 cut(s) | 289 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 17, 49 |
| BbsI | GAAGAC | 2 cut(s) | 180, 321 |
| BbvI | GCAGC | 3 cut(s) | 288, 294, 316 |
| BfmI | CTRYAG | 2 cut(s) | 302, 308 |
| BisI | GCNGC | 3 cut(s) | 302, 305, 308 |
| BlsI | GCNGC | 3 cut(s) | 303, 306, 309 |
| BmgBI | CACGTC | 1 cut(s) | 50 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 238 |
| BpiI | GAAGAC | 2 cut(s) | 180, 321 |
| BseGI | GGATG | 2 cut(s) | 134, 253 |
| BseRI | GAGGAG | 1 cut(s) | 242 |
| BseXI | GCAGC | 3 cut(s) | 288, 294, 316 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BslFI | GGGAC | 1 cut(s) | 36 |
| BsmFI | GGGAC | 1 cut(s) | 36 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bsp143I | GATC | 1 cut(s) | 331 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspMAI | CTGCAG | 2 cut(s) | 306, 312 |
| BssMI | GATC | 1 cut(s) | 331 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 1 cut(s) | 119 |
| BstF5I | GGATG | 2 cut(s) | 134, 253 |
| BstHHI | GCGC | 1 cut(s) | 289 |
| BstKTI | GATC | 1 cut(s) | 334 |
| BstMBI | GATC | 1 cut(s) | 331 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 89, 307 |
| BstNSI | RCATGY | 1 cut(s) | 40 |
| BstSFI | CTRYAG | 2 cut(s) | 302, 308 |
| BstV1I | GCAGC | 3 cut(s) | 288, 294, 316 |
| BstV2I | GAAGAC | 2 cut(s) | 180, 321 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BtrI | CACGTC | 1 cut(s) | 50 |
| BtsCI | GGATG | 2 cut(s) | 134, 253 |
| Cac8I | GCNNGC | 1 cut(s) | 81 |
| CfoI | GCGC | 1 cut(s) | 289 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CviAII | CATG | 2 cut(s) | 37, 141 |
| CviJI | RGCY | 5 cut(s) | 32, 68, 208, 301, 307 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 68, 208, 301, 307 |
| DdeI | CTNAG | 1 cut(s) | 119 |
| DpnI | GATC | 1 cut(s) | 333 |
| DpnII | GATC | 1 cut(s) | 331 |
| FaeI | CATG | 2 cut(s) | 40, 144 |
| FaiI | YATR | 7 cut(s) | 13, 38, 77, 90, 142, 179, 361 |
| FaqI | GGGAC | 1 cut(s) | 36 |
| FatI | CATG | 2 cut(s) | 36, 140 |
| Fnu4HI | GCNGC | 3 cut(s) | 302, 305, 308 |
| FokI | GGATG | 2 cut(s) | 121, 260 |
| Fsp4HI | GCNGC | 3 cut(s) | 302, 305, 308 |
| GlaI | GCGC | 1 cut(s) | 288 |
| GluI | GCNGC | 3 cut(s) | 302, 305, 308 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HhaI | GCGC | 1 cut(s) | 289 |
| Hin1II | CATG | 2 cut(s) | 40, 144 |
| Hin6I | GCGC | 1 cut(s) | 287 |
| HinP1I | GCGC | 1 cut(s) | 287 |
| Hpy188III | TCNNGA | 1 cut(s) | 195 |
| HpyCH4IV | ACGT | 1 cut(s) | 49 |
| HpyCH4V | TGCA | 5 cut(s) | 79, 150, 236, 304, 310 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 89, 307 |
| HpyF3I | CTNAG | 1 cut(s) | 119 |
| HpySE526I | ACGT | 1 cut(s) | 49 |
| Hsp92II | CATG | 2 cut(s) | 40, 144 |
| HspAI | GCGC | 1 cut(s) | 287 |
| Kzo9I | GATC | 1 cut(s) | 331 |
| LpnPI | CCDG | 3 cut(s) | 264, 296, 320 |
| Lsp1109I | GCAGC | 3 cut(s) | 288, 294, 316 |
| LweI | GCATC | 1 cut(s) | 238 |
| MaeII | ACGT | 1 cut(s) | 49 |
| MalI | GATC | 1 cut(s) | 333 |
| MboI | GATC | 1 cut(s) | 331 |
| MboII | GAAGA | 3 cut(s) | 16, 185, 326 |
| MfeI | CAATTG | 1 cut(s) | 99 |
| MluCI | AATT | 1 cut(s) | 99 |
| MnlI | CCTC | 5 cut(s) | 37, 64, 80, 120, 220 |
| MroXI | GAANNNNTTC | 1 cut(s) | 264 |
| MseI | TTAA | 2 cut(s) | 18, 201 |
| MslI | CAYNNNNRTG | 1 cut(s) | 139 |
| MspA1I | CMGCKG | 2 cut(s) | 301, 307 |
| MunI | CAATTG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 89, 307 |
| NdeII | GATC | 1 cut(s) | 331 |
| NlaIII | CATG | 2 cut(s) | 40, 144 |
| NspI | RCATGY | 1 cut(s) | 40 |
| PciI | ACATGT | 1 cut(s) | 36 |
| PdmI | GAANNNNTTC | 1 cut(s) | 264 |
| PkrI | GCNGC | 3 cut(s) | 303, 306, 309 |
| PscI | ACATGT | 1 cut(s) | 36 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PstI | CTGCAG | 2 cut(s) | 306, 312 |
| PvuII | CAGCTG | 2 cut(s) | 301, 307 |
| RseI | CAYNNNNRTG | 1 cut(s) | 139 |
| SaqAI | TTAA | 2 cut(s) | 18, 201 |
| SatI | GCNGC | 3 cut(s) | 302, 305, 308 |
| Sau3AI | GATC | 1 cut(s) | 331 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 5 cut(s) | 52, 210, 303, 309, 329 |
| SfaNI | GCATC | 1 cut(s) | 238 |
| SfcI | CTRYAG | 2 cut(s) | 302, 308 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 139 |
| Sse9I | AATT | 1 cut(s) | 99 |
| TaiI | ACGT | 1 cut(s) | 52 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 1 cut(s) | 99 |
| Tru1I | TTAA | 2 cut(s) | 18, 201 |
| Tru9I | TTAA | 2 cut(s) | 18, 201 |
| TseI | GCWGC | 3 cut(s) | 301, 304, 307 |
| TspDTI | ATGAA | 4 cut(s) | 17, 123, 186, 257 |
| XceI | RCATGY | 1 cut(s) | 40 |
| XmnI | GAANNNNTTC | 1 cut(s) | 264 |