Rh6AG425900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
61754206 .. 61754376
171 bp
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UTR
Exon/CDS
Intron
Rh6AG425900.1

Sequence Viewer

Length: 171 bp
ATGGAAGAGAGAGATGAGGTTGGGAGGTCTGACCTGTACGTGCGAGCTGAAAAGCTCCGGTACGGCGGCGGTGGTGGATTTGCCGGAGAGAGTGAGGAGGTGCGCACGTTAGCGTCGGGGTGTGGAATTGAGAAGGGGGAGTGTATAAAGTGCGCCGCGAGTAGAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

56

Amino Acids

6.0

Weight (kDa)

5.05

Isoelectric Point (pI)

56.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020003)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 104
AccII CGCG 1 cut(s) 158
AciI CCGC 3 cut(s) 66, 69, 156
AfaI GTAC 2 cut(s) 38, 62
AluBI AGCT 2 cut(s) 47, 55
AluI AGCT 2 cut(s) 47, 55
AspLEI GCGC 2 cut(s) 105, 155
BceAI ACGGC 1 cut(s) 79
BisI GCNGC 2 cut(s) 67, 156
BlsI GCNGC 2 cut(s) 68, 157
BsaAI YACGTR 1 cut(s) 40
BsaWI WCCGGW 1 cut(s) 57
BseRI GAGGAG 1 cut(s) 110
Bsh1236I CGCG 1 cut(s) 158
BsiSI CCGG 2 cut(s) 58, 84
BspACI CCGC 3 cut(s) 66, 69, 156
BspFNI CGCG 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 40
BstC8I GCNNGC 1 cut(s) 45
BstFNI CGCG 1 cut(s) 158
BstHHI GCGC 2 cut(s) 105, 155
BstUI CGCG 1 cut(s) 158
Cac8I GCNNGC 1 cut(s) 45
CfoI GCGC 2 cut(s) 105, 155
CseI GACGC 1 cut(s) 102
Csp6I GTAC 2 cut(s) 37, 61
CviJI RGCY 2 cut(s) 47, 55
CviKI_1 RGCY 2 cut(s) 47, 55
CviQI GTAC 2 cut(s) 37, 61
FaiI YATR 1 cut(s) 146
Fnu4HI GCNGC 2 cut(s) 67, 156
Fsp4HI GCNGC 2 cut(s) 67, 156
FspAI RTGCGCAY 1 cut(s) 104
FspI TGCGCA 1 cut(s) 104
GlaI GCGC 2 cut(s) 104, 154
GluI GCNGC 2 cut(s) 67, 156
HapII CCGG 2 cut(s) 58, 84
HgaI GACGC 1 cut(s) 102
HhaI GCGC 2 cut(s) 105, 155
Hin6I GCGC 2 cut(s) 103, 153
HinP1I GCGC 2 cut(s) 103, 153
HpaII CCGG 2 cut(s) 58, 84
Hpy188I TCNGA 1 cut(s) 31
Hpy99I CGWCG 1 cut(s) 118
HpyAV CCTTC 1 cut(s) 127
HpyCH4IV ACGT 2 cut(s) 39, 107
HpySE526I ACGT 2 cut(s) 39, 107
HspAI GCGC 2 cut(s) 103, 153
LmnI GCTCC 1 cut(s) 60
LpnPI CCDG 3 cut(s) 47, 71, 97
MaeII ACGT 2 cut(s) 39, 107
MboII GAAGA 1 cut(s) 17
MluCI AATT 2 cut(s) 126, 166
MnlI CCTC 4 cut(s) 10, 18, 88, 91
MseI TTAA 1 cut(s) 169
MspI CCGG 2 cut(s) 58, 84
MvnI CGCG 1 cut(s) 158
NsbI TGCGCA 1 cut(s) 104
PkrI GCNGC 2 cut(s) 68, 157
Ppu21I YACGTR 1 cut(s) 40
RsaI GTAC 2 cut(s) 38, 62
RsaNI GTAC 2 cut(s) 37, 61
SaqAI TTAA 1 cut(s) 169
SatI GCNGC 2 cut(s) 67, 156
SetI ASST 8 cut(s) 21, 29, 36, 42, 49, 57, 102, 110
SgeI CNNG 7 cut(s) 46, 52, 56, 70, 96, 118, 129
Sse9I AATT 2 cut(s) 126, 166
SsiI CCGC 3 cut(s) 66, 69, 156
TaiI ACGT 2 cut(s) 42, 110
TasI AATT 2 cut(s) 126, 166
TauI GCSGC 2 cut(s) 69, 158
Tru1I TTAA 1 cut(s) 169
Tru9I TTAA 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.