Endo-1,4-beta-xylanase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0252831 |
| rosa_laevigata | RLG00000015062 |
| rosa_rugosa | Rorug05G0538900 Rorug05G0539000 |
| rosa_samantha | Rh6AG055000 Rh6BG049100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 153 |
| AcsI | RAATTY | 2 cut(s) | 69, 304 |
| AfaI | GTAC | 2 cut(s) | 29, 54 |
| AgsI | TTSAA | 3 cut(s) | 74, 145, 328 |
| AjnI | CCWGG | 2 cut(s) | 351, 359 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 70, 102 |
| AluBI | AGCT | 1 cut(s) | 375 |
| AluI | AGCT | 1 cut(s) | 375 |
| AoxI | GGCC | 2 cut(s) | 153, 249 |
| ApeKI | GCWGC | 1 cut(s) | 372 |
| ApoI | RAATTY | 2 cut(s) | 69, 304 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 332, 364 |
| AspS9I | GGNCC | 1 cut(s) | 13 |
| AsuHPI | GGTGA | 2 cut(s) | 53, 281 |
| AvaII | GGWCC | 1 cut(s) | 13 |
| BalI | TGGCCA | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 384 |
| BccI | CCATC | 1 cut(s) | 24 |
| BciT130I | CCWGG | 2 cut(s) | 353, 361 |
| BisI | GCNGC | 1 cut(s) | 373 |
| BlsI | GCNGC | 1 cut(s) | 374 |
| Bme1390I | CCNGG | 2 cut(s) | 353, 361 |
| Bme18I | GGWCC | 1 cut(s) | 13 |
| BmgT120I | GGNCC | 1 cut(s) | 13 |
| BmiI | GGNNCC | 1 cut(s) | 365 |
| BmrFI | CCNGG | 2 cut(s) | 353, 361 |
| BpuEI | CTTGAG | 1 cut(s) | 90 |
| BsaJI | CCNNGG | 3 cut(s) | 262, 312, 351 |
| Bse1I | ACTGG | 1 cut(s) | 163 |
| Bse3DI | GCAATG | 1 cut(s) | 367 |
| BseBI | CCWGG | 2 cut(s) | 353, 361 |
| BseDI | CCNNGG | 3 cut(s) | 262, 312, 351 |
| BseGI | GGATG | 1 cut(s) | 116 |
| BseMI | GCAATG | 1 cut(s) | 367 |
| BseMII | CTCAG | 1 cut(s) | 336 |
| BseNI | ACTGG | 1 cut(s) | 163 |
| BseXI | GCAGC | 1 cut(s) | 384 |
| BshFI | GGCC | 2 cut(s) | 155, 251 |
| BslFI | GGGAC | 1 cut(s) | 334 |
| BsmFI | GGGAC | 1 cut(s) | 334 |
| BsnI | GGCC | 2 cut(s) | 155, 251 |
| BspANI | GGCC | 2 cut(s) | 155, 251 |
| BspCNI | CTCAG | 1 cut(s) | 337 |
| BspLI | GGNNCC | 1 cut(s) | 365 |
| BsrDI | GCAATG | 1 cut(s) | 367 |
| BsrI | ACTGG | 1 cut(s) | 163 |
| BssECI | CCNNGG | 3 cut(s) | 262, 312, 351 |
| BssT1I | CCWWGG | 1 cut(s) | 312 |
| Bst2UI | CCWGG | 2 cut(s) | 353, 361 |
| Bst6I | CTCTTC | 1 cut(s) | 263 |
| BstDEI | CTNAG | 1 cut(s) | 345 |
| BstDSI | CCRYGG | 1 cut(s) | 262 |
| BstF5I | GGATG | 1 cut(s) | 116 |
| BstNI | CCWGG | 2 cut(s) | 353, 361 |
| BstSCI | CCNGG | 2 cut(s) | 351, 359 |
| BstV1I | GCAGC | 1 cut(s) | 384 |
| BsuRI | GGCC | 2 cut(s) | 155, 251 |
| BtgI | CCRYGG | 1 cut(s) | 262 |
| BtsCI | GGATG | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| Cfr13I | GGNCC | 1 cut(s) | 13 |
| CseI | GACGC | 1 cut(s) | 239 |
| Csp6I | GTAC | 2 cut(s) | 28, 53 |
| CviAII | CATG | 3 cut(s) | 24, 96, 185 |
| CviJI | RGCY | 4 cut(s) | 155, 203, 251, 375 |
| CviKI_1 | RGCY | 4 cut(s) | 155, 203, 251, 375 |
| CviQI | GTAC | 2 cut(s) | 28, 53 |
| DdeI | CTNAG | 1 cut(s) | 345 |
| EaeI | YGGCCR | 1 cut(s) | 153 |
| Eam1104I | CTCTTC | 1 cut(s) | 263 |
| EarI | CTCTTC | 1 cut(s) | 263 |
| Eco130I | CCWWGG | 1 cut(s) | 312 |
| Eco147I | AGGCCT | 1 cut(s) | 251 |
| Eco47I | GGWCC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 2 cut(s) | 351, 359 |
| EcoT14I | CCWWGG | 1 cut(s) | 312 |
| ErhI | CCWWGG | 1 cut(s) | 312 |
| FaeI | CATG | 3 cut(s) | 27, 99, 188 |
| FaiI | YATR | 4 cut(s) | 25, 97, 186, 273 |
| FaqI | GGGAC | 1 cut(s) | 334 |
| FatI | CATG | 3 cut(s) | 23, 95, 184 |
| Fnu4HI | GCNGC | 1 cut(s) | 373 |
| FokI | GGATG | 1 cut(s) | 123 |
| Fsp4HI | GCNGC | 1 cut(s) | 373 |
| GluI | GCNGC | 1 cut(s) | 373 |
| HaeIII | GGCC | 2 cut(s) | 155, 251 |
| HgaI | GACGC | 1 cut(s) | 239 |
| Hin1II | CATG | 3 cut(s) | 27, 99, 188 |
| HincII | GTYRAC | 1 cut(s) | 280 |
| HindII | GTYRAC | 1 cut(s) | 280 |
| HinfI | GANTC | 5 cut(s) | 40, 209, 324, 347, 356 |
| HpaI | GTTAAC | 1 cut(s) | 280 |
| HphI | GGTGA | 2 cut(s) | 53, 281 |
| Hpy166II | GTNNAC | 3 cut(s) | 172, 280, 319 |
| Hpy188I | TCNGA | 1 cut(s) | 346 |
| Hpy8I | GTNNAC | 3 cut(s) | 172, 280, 319 |
| HpyCH4V | TGCA | 4 cut(s) | 6, 95, 335, 372 |
| HpyF3I | CTNAG | 1 cut(s) | 345 |
| Hsp92II | CATG | 3 cut(s) | 27, 99, 188 |
| KspAI | GTTAAC | 1 cut(s) | 280 |
| LmnI | GCTCC | 1 cut(s) | 34 |
| LpnPI | CCDG | 6 cut(s) | 5, 144, 338, 346, 365, 373 |
| Lsp1109I | GCAGC | 1 cut(s) | 384 |
| MaeIII | GTNAC | 3 cut(s) | 113, 177, 298 |
| MboII | GAAGA | 1 cut(s) | 250 |
| MlsI | TGGCCA | 1 cut(s) | 155 |
| MluCI | AATT | 4 cut(s) | 69, 78, 139, 304 |
| MluNI | TGGCCA | 1 cut(s) | 155 |
| MlyI | GAGTC | 1 cut(s) | 356 |
| MnlI | CCTC | 7 cut(s) | 43, 114, 241, 262, 266, 304, 319 |
| Mox20I | TGGCCA | 1 cut(s) | 155 |
| MscI | TGGCCA | 1 cut(s) | 155 |
| MseI | TTAA | 3 cut(s) | 128, 279, 377 |
| Msp20I | TGGCCA | 1 cut(s) | 155 |
| MspR9I | CCNGG | 2 cut(s) | 353, 361 |
| MvaI | CCWGG | 2 cut(s) | 353, 361 |
| NlaIII | CATG | 3 cut(s) | 27, 99, 188 |
| NlaIV | GGNNCC | 1 cut(s) | 365 |
| NmuCI | GTSAC | 1 cut(s) | 298 |
| PceI | AGGCCT | 1 cut(s) | 251 |
| PfeI | GAWTC | 4 cut(s) | 40, 209, 324, 356 |
| PfoI | TCCNGGA | 1 cut(s) | 359 |
| PkrI | GCNGC | 1 cut(s) | 374 |
| PleI | GAGTC | 1 cut(s) | 355 |
| PpsI | GAGTC | 1 cut(s) | 355 |
| Psp6I | CCWGG | 2 cut(s) | 351, 359 |
| PspGI | CCWGG | 2 cut(s) | 351, 359 |
| PspN4I | GGNNCC | 1 cut(s) | 365 |
| PspPI | GGNCC | 1 cut(s) | 13 |
| RsaI | GTAC | 2 cut(s) | 29, 54 |
| RsaNI | GTAC | 2 cut(s) | 28, 53 |
| SaqAI | TTAA | 3 cut(s) | 128, 279, 377 |
| SatI | GCNGC | 1 cut(s) | 373 |
| Sau96I | GGNCC | 1 cut(s) | 13 |
| SchI | GAGTC | 1 cut(s) | 356 |
| ScrFI | CCNGG | 2 cut(s) | 353, 361 |
| SetI | ASST | 3 cut(s) | 54, 106, 377 |
| SinI | GGWCC | 1 cut(s) | 13 |
| SmlI | CTYRAG | 1 cut(s) | 105 |
| SmoI | CTYRAG | 1 cut(s) | 105 |
| Sse9I | AATT | 4 cut(s) | 69, 78, 139, 304 |
| SseBI | AGGCCT | 1 cut(s) | 251 |
| StuI | AGGCCT | 1 cut(s) | 251 |
| StyD4I | CCNGG | 2 cut(s) | 351, 359 |
| StyI | CCWWGG | 1 cut(s) | 312 |
| TaqI | TCGA | 2 cut(s) | 207, 212 |
| TasI | AATT | 4 cut(s) | 69, 78, 139, 304 |
| TfiI | GAWTC | 4 cut(s) | 40, 209, 324, 356 |
| Tru1I | TTAA | 3 cut(s) | 128, 279, 377 |
| Tru9I | TTAA | 3 cut(s) | 128, 279, 377 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TseFI | GTSAC | 1 cut(s) | 298 |
| TseI | GCWGC | 1 cut(s) | 372 |
| Tsp45I | GTSAC | 1 cut(s) | 298 |
| TspDTI | ATGAA | 2 cut(s) | 201, 288 |
| TspRI | CASTG | 1 cut(s) | 163 |
| VpaK11BI | GGWCC | 1 cut(s) | 13 |
| XapI | RAATTY | 2 cut(s) | 69, 304 |