Leucine-rich repeats, typical (most populated) subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000012610 |
| rosa_multiflora | Rmu_sc0021325.1_g000001 Rmu_sc0041399.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00182720 |
| rosa_rugosa | Rorug06G0176900 |
| rosa_samantha | Rh6BG290600 Rh6CG291200 Rh6DG283700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 9, 229 |
| AcuI | CTGAAG | 1 cut(s) | 209 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 284 |
| AgsI | TTSAA | 3 cut(s) | 26, 257, 335 |
| AleI | CACNNNNGTG | 1 cut(s) | 203 |
| AluBI | AGCT | 2 cut(s) | 298, 361 |
| AluI | AGCT | 2 cut(s) | 298, 361 |
| ApeKI | GCWGC | 2 cut(s) | 214, 288 |
| ApoI | RAATTY | 2 cut(s) | 9, 229 |
| AsuHPI | GGTGA | 2 cut(s) | 194, 353 |
| BbvI | GCAGC | 2 cut(s) | 201, 275 |
| BccI | CCATC | 1 cut(s) | 338 |
| BisI | GCNGC | 2 cut(s) | 215, 289 |
| BlsI | GCNGC | 2 cut(s) | 216, 290 |
| BmsI | GCATC | 2 cut(s) | 86, 203 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 25, 57 |
| BpuEI | CTTGAG | 1 cut(s) | 27 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 284 |
| BseGI | GGATG | 1 cut(s) | 194 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 284 |
| BseRI | GAGGAG | 1 cut(s) | 46 |
| BseXI | GCAGC | 2 cut(s) | 201, 275 |
| BsgI | GTGCAG | 1 cut(s) | 143 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 284 |
| Bst4CI | ACNGT | 4 cut(s) | 21, 178, 282, 323 |
| Bst6I | CTCTTC | 1 cut(s) | 330 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 363 |
| BstF5I | GGATG | 1 cut(s) | 194 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 138 |
| BstV1I | GCAGC | 2 cut(s) | 201, 275 |
| BtsCI | GGATG | 1 cut(s) | 194 |
| BtsI | GCAGTG | 1 cut(s) | 136 |
| BtsIMutI | CAGTG | 3 cut(s) | 136, 174, 278 |
| Cac8I | GCNNGC | 1 cut(s) | 363 |
| CviJI | RGCY | 3 cut(s) | 288, 298, 361 |
| CviKI_1 | RGCY | 3 cut(s) | 288, 298, 361 |
| DraI | TTTAAA | 1 cut(s) | 159 |
| Eam1104I | CTCTTC | 1 cut(s) | 330 |
| EarI | CTCTTC | 1 cut(s) | 330 |
| Eco57I | CTGAAG | 1 cut(s) | 209 |
| EcoRI | GAATTC | 1 cut(s) | 9 |
| FaiI | YATR | 1 cut(s) | 372 |
| Fnu4HI | GCNGC | 2 cut(s) | 215, 289 |
| FokI | GGATG | 1 cut(s) | 181 |
| Fsp4HI | GCNGC | 2 cut(s) | 215, 289 |
| GluI | GCNGC | 2 cut(s) | 215, 289 |
| HindIII | AAGCTT | 1 cut(s) | 359 |
| HinfI | GANTC | 1 cut(s) | 114 |
| HphI | GGTGA | 2 cut(s) | 194, 353 |
| Hpy166II | GTNNAC | 2 cut(s) | 56, 208 |
| Hpy188I | TCNGA | 3 cut(s) | 15, 82, 228 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| Hpy8I | GTNNAC | 2 cut(s) | 56, 208 |
| HpyAV | CCTTC | 2 cut(s) | 233, 320 |
| HpyCH4III | ACNGT | 4 cut(s) | 21, 178, 282, 323 |
| HpyCH4V | TGCA | 5 cut(s) | 124, 141, 152, 239, 291 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 138 |
| Lsp1109I | GCAGC | 2 cut(s) | 201, 275 |
| LweI | GCATC | 2 cut(s) | 86, 203 |
| MaeIII | GTNAC | 2 cut(s) | 248, 271 |
| MboII | GAAGA | 1 cut(s) | 347 |
| MfeI | CAATTG | 1 cut(s) | 201 |
| MluCI | AATT | 4 cut(s) | 9, 201, 229, 244 |
| MnlI | CCTC | 5 cut(s) | 24, 51, 101, 184, 331 |
| MseI | TTAA | 2 cut(s) | 63, 158 |
| MslI | CAYNNNNRTG | 1 cut(s) | 203 |
| MunI | CAATTG | 1 cut(s) | 201 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 138 |
| NmuCI | GTSAC | 1 cut(s) | 248 |
| OliI | CACNNNNGTG | 1 cut(s) | 203 |
| PfeI | GAWTC | 1 cut(s) | 114 |
| PkrI | GCNGC | 2 cut(s) | 216, 290 |
| RseI | CAYNNNNRTG | 1 cut(s) | 203 |
| SaqAI | TTAA | 2 cut(s) | 63, 158 |
| SatI | GCNGC | 2 cut(s) | 215, 289 |
| SetI | ASST | 6 cut(s) | 69, 225, 300, 331, 363, 383 |
| SfaNI | GCATC | 2 cut(s) | 86, 203 |
| SgeI | CNNG | 8 cut(s) | 56, 131, 154, 182, 223, 252, 311, 374 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 203 |
| SmlI | CTYRAG | 1 cut(s) | 42 |
| SmoI | CTYRAG | 1 cut(s) | 42 |
| Sse9I | AATT | 4 cut(s) | 9, 201, 229, 244 |
| TaaI | ACNGT | 4 cut(s) | 21, 178, 282, 323 |
| TasI | AATT | 4 cut(s) | 9, 201, 229, 244 |
| TfiI | GAWTC | 1 cut(s) | 114 |
| Tru1I | TTAA | 2 cut(s) | 63, 158 |
| Tru9I | TTAA | 2 cut(s) | 63, 158 |
| TscAI | CASTG | 3 cut(s) | 143, 181, 285 |
| TseFI | GTSAC | 1 cut(s) | 248 |
| TseI | GCWGC | 2 cut(s) | 214, 288 |
| Tsp45I | GTSAC | 1 cut(s) | 248 |
| TspRI | CASTG | 3 cut(s) | 143, 181, 285 |
| XapI | RAATTY | 2 cut(s) | 9, 229 |