F-box LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000012610 |
| rosa_multiflora | Rmu_sc0021325.1_g000001 Rmu_sc0041399.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00182720 |
| rosa_rugosa | Rorug06G0176900 |
| rosa_samantha | Rh6BG290600 Rh6CG291200 Rh6DG283700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 262 |
| AcsI | RAATTY | 2 cut(s) | 133, 208 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 46 |
| AgsI | TTSAA | 4 cut(s) | 20, 206, 236, 314 |
| AleI | CACNNNNGTG | 1 cut(s) | 182 |
| AluBI | AGCT | 3 cut(s) | 277, 340, 427 |
| AluI | AGCT | 3 cut(s) | 277, 340, 427 |
| Alw26I | GTCTC | 1 cut(s) | 233 |
| AoxI | GGCC | 2 cut(s) | 36, 70 |
| ApeKI | GCWGC | 2 cut(s) | 193, 267 |
| ApoI | RAATTY | 2 cut(s) | 133, 208 |
| AspS9I | GGNCC | 2 cut(s) | 37, 109 |
| AsuHPI | GGTGA | 1 cut(s) | 332 |
| AvaII | GGWCC | 1 cut(s) | 109 |
| BbsI | GAAGAC | 1 cut(s) | 321 |
| BbvI | GCAGC | 2 cut(s) | 180, 254 |
| BccI | CCATC | 3 cut(s) | 84, 236, 317 |
| BcoDI | GTCTC | 1 cut(s) | 233 |
| BfaI | CTAG | 1 cut(s) | 219 |
| BisI | GCNGC | 2 cut(s) | 194, 268 |
| BlsI | GCNGC | 2 cut(s) | 195, 269 |
| Bme18I | GGWCC | 1 cut(s) | 109 |
| BmgT120I | GGNCC | 2 cut(s) | 37, 109 |
| BmsI | GCATC | 2 cut(s) | 182, 280 |
| BpiI | GAAGAC | 1 cut(s) | 321 |
| BpmI | CTGGAG | 1 cut(s) | 113 |
| BpuEI | CTTGAG | 1 cut(s) | 363 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 46 |
| BseGI | GGATG | 3 cut(s) | 13, 173, 247 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BseRI | GAGGAG | 1 cut(s) | 110 |
| BseXI | GCAGC | 2 cut(s) | 180, 254 |
| BshFI | GGCC | 2 cut(s) | 38, 72 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BsmAI | GTCTC | 1 cut(s) | 233 |
| BsnI | GGCC | 2 cut(s) | 38, 72 |
| BspACI | CCGC | 1 cut(s) | 262 |
| BspANI | GGCC | 2 cut(s) | 38, 72 |
| Bst4CI | ACNGT | 4 cut(s) | 105, 157, 302, 320 |
| BstC8I | GCNNGC | 1 cut(s) | 342 |
| BstDEI | CTNAG | 1 cut(s) | 410 |
| BstF5I | GGATG | 3 cut(s) | 13, 173, 247 |
| BstMAI | GTCTC | 1 cut(s) | 233 |
| BstV1I | GCAGC | 2 cut(s) | 180, 254 |
| BstV2I | GAAGAC | 1 cut(s) | 321 |
| BsuRI | GGCC | 2 cut(s) | 38, 72 |
| BtsCI | GGATG | 3 cut(s) | 13, 173, 247 |
| BtsIMutI | CAGTG | 1 cut(s) | 153 |
| Cac8I | GCNNGC | 1 cut(s) | 342 |
| Cfr13I | GGNCC | 2 cut(s) | 37, 109 |
| CviAII | CATG | 1 cut(s) | 46 |
| CviJI | RGCY | 8 cut(s) | 38, 72, 267, 277, 340, 384, 427, 457 |
| CviKI_1 | RGCY | 8 cut(s) | 38, 72, 267, 277, 340, 384, 427, 457 |
| DdeI | CTNAG | 1 cut(s) | 410 |
| DraI | TTTAAA | 2 cut(s) | 138, 402 |
| Eco47I | GGWCC | 1 cut(s) | 109 |
| FaeI | CATG | 1 cut(s) | 49 |
| FaiI | YATR | 4 cut(s) | 47, 123, 351, 387 |
| FatI | CATG | 1 cut(s) | 45 |
| FauI | CCCGC | 1 cut(s) | 255 |
| Fnu4HI | GCNGC | 2 cut(s) | 194, 268 |
| FokI | GGATG | 3 cut(s) | 20, 160, 254 |
| Fsp4HI | GCNGC | 2 cut(s) | 194, 268 |
| FspBI | CTAG | 1 cut(s) | 219 |
| GluI | GCNGC | 2 cut(s) | 194, 268 |
| GsuI | CTGGAG | 1 cut(s) | 113 |
| HaeIII | GGCC | 2 cut(s) | 38, 72 |
| Hin1II | CATG | 1 cut(s) | 49 |
| HindIII | AAGCTT | 2 cut(s) | 338, 425 |
| HinfI | GANTC | 1 cut(s) | 42 |
| HphI | GGTGA | 1 cut(s) | 332 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyAV | CCTTC | 4 cut(s) | 28, 62, 212, 299 |
| HpyCH4III | ACNGT | 4 cut(s) | 105, 157, 302, 320 |
| HpyCH4V | TGCA | 1 cut(s) | 270 |
| HpyF3I | CTNAG | 1 cut(s) | 410 |
| Hsp92II | CATG | 1 cut(s) | 49 |
| LpnPI | CCDG | 2 cut(s) | 86, 143 |
| Lsp1109I | GCAGC | 2 cut(s) | 180, 254 |
| LweI | GCATC | 2 cut(s) | 182, 280 |
| MaeI | CTAG | 1 cut(s) | 219 |
| MaeIII | GTNAC | 2 cut(s) | 99, 250 |
| MboII | GAAGA | 7 cut(s) | 68, 71, 74, 77, 96, 99, 326 |
| MfeI | CAATTG | 1 cut(s) | 180 |
| MluCI | AATT | 4 cut(s) | 133, 180, 208, 223 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| MnlI | CCTC | 3 cut(s) | 88, 163, 414 |
| MseI | TTAA | 3 cut(s) | 137, 401, 449 |
| MslI | CAYNNNNRTG | 1 cut(s) | 182 |
| MunI | CAATTG | 1 cut(s) | 180 |
| NlaIII | CATG | 1 cut(s) | 49 |
| OliI | CACNNNNGTG | 1 cut(s) | 182 |
| PfeI | GAWTC | 1 cut(s) | 42 |
| PkrI | GCNGC | 2 cut(s) | 195, 269 |
| PspPI | GGNCC | 2 cut(s) | 37, 109 |
| RseI | CAYNNNNRTG | 1 cut(s) | 182 |
| SaqAI | TTAA | 3 cut(s) | 137, 401, 449 |
| SatI | GCNGC | 2 cut(s) | 194, 268 |
| Sau96I | GGNCC | 2 cut(s) | 37, 109 |
| SetI | ASST | 7 cut(s) | 114, 204, 279, 310, 342, 362, 429 |
| SfaNI | GCATC | 2 cut(s) | 182, 280 |
| SinI | GGWCC | 1 cut(s) | 109 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 182 |
| SmlI | CTYRAG | 1 cut(s) | 378 |
| SmoI | CTYRAG | 1 cut(s) | 378 |
| Sse9I | AATT | 4 cut(s) | 133, 180, 208, 223 |
| SsiI | CCGC | 1 cut(s) | 262 |
| SspMI | CTAG | 1 cut(s) | 219 |
| TaaI | ACNGT | 4 cut(s) | 105, 157, 302, 320 |
| TasI | AATT | 4 cut(s) | 133, 180, 208, 223 |
| TfiI | GAWTC | 1 cut(s) | 42 |
| Tru1I | TTAA | 3 cut(s) | 137, 401, 449 |
| Tru9I | TTAA | 3 cut(s) | 137, 401, 449 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TseI | GCWGC | 2 cut(s) | 193, 267 |
| TspDTI | ATGAA | 2 cut(s) | 34, 177 |
| TspRI | CASTG | 1 cut(s) | 160 |
| VpaK11BI | GGWCC | 1 cut(s) | 109 |
| XapI | RAATTY | 2 cut(s) | 133, 208 |
| XspI | CTAG | 1 cut(s) | 219 |