Rh6DG197700

Glycine--tRNA ligase 1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
35373313 .. 35373728
416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG197700.1

Sequence Viewer

Length: 252 bp
ATGGGCATTGCCGCTAAATCATGGAGGGAGGAATATGCCCCTAAAACAGATAACCATCCTCTCTCAAATCCTTATCCTTTCAATTTGATGTTTCAAACATCAATTGGTCCATCTGGTTCGAGCACTGGTTTCTTTCGCCCAGAAACTGCACAAGGCATATTTGTGAATTTTATGGACATTTACTTTGACAATGGGTACAAGCTGCCTTTTGCTGTTGCTCAAGTTGGCCAGGCCTTTGGAAACGAGAGATAA

Protein Analysis

83

Amino Acids

9.27

Weight (kDa)

5.62

Isoelectric Point (pI)

25.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0019946)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 12
AcoI YGGCCR 1 cut(s) 226
AcsI RAATTY 1 cut(s) 166
AfaI GTAC 1 cut(s) 197
AgsI TTSAA 2 cut(s) 82, 95
AjnI CCWGG 1 cut(s) 228
AluBI AGCT 1 cut(s) 202
AluI AGCT 1 cut(s) 202
Alw21I GWGCWC 1 cut(s) 125
AlwNI CAGNNNCTG 1 cut(s) 146
AoxI GGCC 2 cut(s) 226, 231
ApeKI GCWGC 1 cut(s) 202
ApoI RAATTY 1 cut(s) 166
ArsI GACNNNNNNTTYG 2 cut(s) 167, 199
AspS9I GGNCC 1 cut(s) 107
AvaII GGWCC 1 cut(s) 107
BalI TGGCCA 1 cut(s) 228
Bbv12I GWGCWC 1 cut(s) 125
BbvI GCAGC 1 cut(s) 189
BccI CCATC 2 cut(s) 63, 118
BciT130I CCWGG 1 cut(s) 230
BisI GCNGC 2 cut(s) 12, 203
BlsI GCNGC 2 cut(s) 13, 204
Bme1390I CCNGG 1 cut(s) 230
Bme18I GGWCC 1 cut(s) 107
BmgT120I GGNCC 1 cut(s) 107
BmrFI CCNGG 1 cut(s) 230
BpuEI CTTGAG 1 cut(s) 204
BsaBI GATNNNNATC 1 cut(s) 54
Bse1I ACTGG 1 cut(s) 130
Bse3DI GCAATG 1 cut(s) 6
Bse8I GATNNNNATC 1 cut(s) 54
BseBI CCWGG 1 cut(s) 230
BseGI GGATG 1 cut(s) 55
BseJI GATNNNNATC 1 cut(s) 54
BseMI GCAATG 1 cut(s) 6
BseNI ACTGG 1 cut(s) 130
BseXI GCAGC 1 cut(s) 189
BsgI GTGCAG 1 cut(s) 132
BshFI GGCC 2 cut(s) 228, 233
BsiHKAI GWGCWC 1 cut(s) 125
BsnI GGCC 2 cut(s) 228, 233
Bsp1286I GDGCHC 1 cut(s) 125
BspACI CCGC 1 cut(s) 12
BspANI GGCC 2 cut(s) 228, 233
BsrDI GCAATG 1 cut(s) 6
BsrI ACTGG 1 cut(s) 130
Bst2UI CCWGG 1 cut(s) 230
BstF5I GGATG 1 cut(s) 55
BstNI CCWGG 1 cut(s) 230
BstSCI CCNGG 1 cut(s) 228
BstV1I GCAGC 1 cut(s) 189
BstXI CCANNNNNNTGG 1 cut(s) 236
BsuRI GGCC 2 cut(s) 228, 233
BtsCI GGATG 1 cut(s) 55
BtsIMutI CAGTG 1 cut(s) 123
CaiI CAGNNNCTG 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 107
Csp6I GTAC 1 cut(s) 196
CviAII CATG 1 cut(s) 21
CviJI RGCY 3 cut(s) 202, 228, 233
CviKI_1 RGCY 3 cut(s) 202, 228, 233
CviQI GTAC 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 226
Eco147I AGGCCT 1 cut(s) 233
Eco47I GGWCC 1 cut(s) 107
EcoRII CCWGG 1 cut(s) 228
FaeI CATG 1 cut(s) 24
FaiI YATR 4 cut(s) 22, 36, 158, 173
FatI CATG 1 cut(s) 20
Fnu4HI GCNGC 2 cut(s) 12, 203
FokI GGATG 1 cut(s) 42
Fsp4HI GCNGC 2 cut(s) 12, 203
GluI GCNGC 2 cut(s) 12, 203
HaeIII GGCC 2 cut(s) 228, 233
Hin1II CATG 1 cut(s) 24
HpyCH4V TGCA 1 cut(s) 149
Hsp92II CATG 1 cut(s) 24
LpnPI CCDG 5 cut(s) 99, 111, 153, 215, 242
Lsp1109I GCAGC 1 cut(s) 189
MfeI CAATTG 1 cut(s) 102
MhlI GDGCHC 1 cut(s) 125
MlsI TGGCCA 1 cut(s) 228
MluCI AATT 3 cut(s) 82, 102, 166
MluNI TGGCCA 1 cut(s) 228
MnlI CCTC 3 cut(s) 18, 22, 69
Mox20I TGGCCA 1 cut(s) 228
MscI TGGCCA 1 cut(s) 228
MslI CAYNNNNRTG 1 cut(s) 161
Msp20I TGGCCA 1 cut(s) 228
MspR9I CCNGG 1 cut(s) 230
MunI CAATTG 1 cut(s) 102
MvaI CCWGG 1 cut(s) 230
NlaIII CATG 1 cut(s) 24
PceI AGGCCT 1 cut(s) 233
PkrI GCNGC 2 cut(s) 13, 204
Psp6I CCWGG 1 cut(s) 228
PspGI CCWGG 1 cut(s) 228
PspPI GGNCC 1 cut(s) 107
PstNI CAGNNNCTG 1 cut(s) 146
RsaI GTAC 1 cut(s) 197
RsaNI GTAC 1 cut(s) 196
RseI CAYNNNNRTG 1 cut(s) 161
SatI GCNGC 2 cut(s) 12, 203
Sau96I GGNCC 1 cut(s) 107
ScrFI CCNGG 1 cut(s) 230
SduI GDGCHC 1 cut(s) 125
SetI ASST 1 cut(s) 204
SinI GGWCC 1 cut(s) 107
SmiMI CAYNNNNRTG 1 cut(s) 161
SmlI CTYRAG 1 cut(s) 219
SmoI CTYRAG 1 cut(s) 219
Sse9I AATT 3 cut(s) 82, 102, 166
SseBI AGGCCT 1 cut(s) 233
SsiI CCGC 1 cut(s) 12
StuI AGGCCT 1 cut(s) 233
StyD4I CCNGG 1 cut(s) 228
TaqI TCGA 1 cut(s) 119
TasI AATT 3 cut(s) 82, 102, 166
TauI GCSGC 1 cut(s) 14
TscAI CASTG 1 cut(s) 130
TseI GCWGC 1 cut(s) 202
TspRI CASTG 1 cut(s) 130
VpaK11BI GGWCC 1 cut(s) 107
XapI RAATTY 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.