Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0014333

Physical Location & Seq

Genomic Coordinates Reverse (-)

56426175 .. 56429054

Gene Structure 2880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG368100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2646 bp

ATGGCGGCAGCAGAGAATTCATCAGGTGGCGGAAGGAGGAATTCCAACACTCAGCTCCTGGAAGAGCTAGAAGCGCTCAGTGAGTCACTCTACCAATCCCACACGTCCACCACTACCACTCGAAGAACTGCCTCCCTTGCTCTTCCGCGAAGCTCGAATCCTGCAATCCCATCAAGAGATGAAATTGCTGCCGCGGCTAAAGTTGAGGAGATCAAAGCCAATAGCACCAAACCACTGAGAAGACGTTTGTCTTTGTCGCCTTGGCGCTCACGTCCAAACGAAAATGAACACAAAGATCGAGGCAAGGGGACGAGTAGTATTAATCAGCTGGAGCTGAAGAGCAATGTGGAGGAGAGATCAAGTAGCAAAGAGAAAAAGGGTATTTGGAATTGGAAGCCGATTCGTGCTATATCCCACATTGGAATGCACAAGATCAGCTGCTTGTTTTCGGTAGAGGTTGTCAGTGCACAAGGCCTTCCTGCTTCGATGAATGGCCTTCGTCTTTCGATTTGTGTTAGGAAGAAGGAGAGCAAAGACGGAGCAGTTCAAACAATGCCATCAAGGGTCACACAAGGAGCTGCAGATTTCGAAGAGACCCTTTTCCTTAGGTGCCATGTGTATTGTAGTTCTGGCCAGGGGAAGCCGATGAAGTTTGAGCCACGGCCCTTTTGGATATATGTGTTTGCAGTTGATGCTGAGGAGCTTGATTTTGGGAGAAATTCCGTGGATTTGAGTCAGCTGATTCAGGAGTCCATTGAGAAGAGCCATGAAGGTAAACGAATTCGCCAATGGGATAAGAGCTTTAGATTGTCAGGGAAGGCAAAAGGTGGGGAGCTTGTTCTGAAGTTGGGGTTTCAGATTATGGAGAAAGATGGAGGAGTTGGAATCTATAGTCAAGCTTCCAGGACATTCTCGTCTTCTTTTGCAAGGAAGCAGTCGAAGACTTCTTTTAGTGTGCCTAGTCCAAAGCTATCAAGCAGAGAAGCATGGACTCCTTCACAAATAGGACAATCTGCTCATGATCTTCATGGAATCGATGAGCTGAATCTTGATGAACCCAACCCAGTTCCAGTATCCTCTTCTTCTTCGGCGCAGAAGCCAAAAGAACCAGAAGCACTGAAGGTAGAGGATCTTGATCTCCCAGACTTCGAAGTAGTGGATAAGGGAGTTGAATTCCAAGACAAGGAAGGGGAATATGGGGAAGCACAATCAGAAATATCCCTTGATGAAAAATCAGCAATATCGAGTGAGGTTGTGAAGGAAATTGTGCAAGACCAAGTGCATATGAAAAGATTGACAGAGCTGGATTCGATTGCTCAGCAGATTAAAGCTCTTGAATCTATGATGGGGAAAGAAAAAACTGTCGCCAAAGACGAAGAAATTGGATCACAAATATTGGAGGCAGATGAAGAAACAGTTACCAAGGAGTTCCTTCAAATGCTTGAGGATGAGGATATCATAAATGAGTATAAGCTCACCCAAAGTGATATTCCACCATTACAGCTTGAAGGAGCTGAGGATTCCACAGAGGCTGAATCCGCAGTATTCCTTCCTGATCTAGGAAAGAGCTTAGGCTGTGTGGTTCAAACCAGAGATGGAGGTTACTTGGCAGCCATGAATCCTCTGGATACTGTGGTAGCAAGGAAAGATACACCGAAACTTGCCATGCAAATATCAAAACCATTTGTTTTGCCATGGGACCAGTCCATGAGTGGCTTCGAATTGTTCCAAAGGATTGCAGCCATTGGACTCGATGAATTGAATTCCCAAATTTCAACTTTGACGAGCATGGATGACCTGATGGATAAAACCGCAGAACAGATAGCTTTCGAAGGCATTGCTTCCGCAATCATCCAAGGGAGGAACAAAGAAGGTGCAAGCTCGAGTGCTGCACGAACCATTGCTGCTGTGAAAACCATGGCAACTGCAATGAGTGCCGGTAGAAAAGAGAGGATTTCCACAGGGATTTGGAATGTGAATGAAAACCCGTTAACAGCAGAGGAGATTCTTGCATTCTCAATGCAGAAAATTGAGTCCATGGCTCTTGAAGCTTTGAAGATTCAGGCTGAAATGGCAGAGGAAGAAGCCCCATTTGATGTTTCGCCATTGATTGGCACCACAGCAACTGGAGGAAAAGTTCAAAATCAACCACTTGCTTCTTCAATATCGCTCGAGGACTGGATCAAAGACCACAGGTTGGTTGGTGTAGATGACTTATTACAACCAGGTGGTGGTCATACCGAGACAATCACACTGGCAGTGGTTGTTCAGCTGAGGGATCCGGTAAGGCGGTATGAGGCTGTAGGAGGCCCAATGATTGCAGTTATCTATGCAACAAGAGCTGATAACACCGGTGCAGTGGATAAGAATGAGGAGGAGGAGAAGAGATTCAAAGTGGCGAGTTTGCATGTTGGAGGGTTAAAGGTGAGGTCAAAAGGCGTTAGGAGAAATGCATGGGACAGTGAGAAGCAGAGACTAACTGCAATGCAGTGGCTGGTGGCTTATGGATTTGCAAAGGCAGGGAAGAAAGGCAAACATAGTGTGTCATCGAAAGGTCAAGATCTGTTATGGAGCATTTCATCAAGAGTAATGGCTGATATGTGGCTCAAATACATGAGAAACCCAGATGTAAAGTTTACCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006928 GO:0006950 GO:0006970 GO:0006996 GO:0007097 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009657 GO:0009658 GO:0009787 GO:0009902 GO:0009903 GO:0009966 GO:0009987 GO:0010029 GO:0010646 GO:0016020 GO:0016043 GO:0019750 GO:0023051 GO:0030029 GO:0030048 GO:0030705 GO:0031022 GO:0042592 GO:0044424 GO:0044444 GO:0044464 GO:0046907 GO:0048580 GO:0048583 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051640 GO:0051641 GO:0051644 GO:0051647 GO:0051649 GO:0051656 GO:0051667 GO:0055081 GO:0055088 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0099515 GO:1900140 GO:1901419 GO:1902265 GO:1905957 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NT-C2

Protein Analysis

881

Amino Acids

97.0

Weight (kDa)

5.59

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NT-C2	PF10358	143 - 291	3e-14	N-terminal C2 in EEIG1 and EHBP1 proteins
PMI1_PMIR1-2_C	PF21745	553 - 701	6e-59	PMI1/PMIR1-2, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42550
fragaria_vesca	FvH4_2g26870
malus_domestica	MD08G1162900.v1.1
prunus_persica	Prupe.1G498000_v2.0.a1
pyrus_communis	pycom08g14070 pycom15g31260
rosa_chinensis	RchiOBHm_Chr6g0295721
rosa_laevigata	RLG00000011772
rosa_multiflora	Rmu_sc0007372.1_g000001 Rmu_sc0007986.1_g000004
rosa_roxburghii	Rroxscaffold_7G00172180
rosa_rugosa	Rorug06G0253800
rosa_samantha	Rh6AG367200 Rh6BG375000 Rh6CG381300 Rh6DG368100
rosa_wichuraiana	Rw6G032050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	913
AccB1I	GGYRCC	2 cut(s)	609, 2114
AccB7I	CCANNNNNTGG	3 cut(s)	2111, 2197, 2231
AccII	CGCG	2 cut(s)	148, 194
AciI	CCGC	9 cut(s)	5, 30, 146, 192, 194, 1539, 1812, 1845, 2290
AclWI	GGATC	5 cut(s)	1137, 1393, 2189, 2273, 2286
AcoI	YGGCCR	1 cut(s)	631
AcsI	RAATTY	7 cut(s)	16, 40, 718, 780, 1172, 1762, 1770
AcuI	CTGAAG	3 cut(s)	356, 863, 1139
AfeI	AGCGCT	1 cut(s)	75
AfiI	CCNNNNNNNGG	5 cut(s)	1183, 1559, 2111, 2197, 2231
AflIII	ACRYGT	1 cut(s)	102
AgeI	ACCGGT	1 cut(s)	2351
AjiI	CACGTC	2 cut(s)	105, 272
AjnI	CCWGG	4 cut(s)	57, 633, 902, 2224
AjuI	GAANNNNNNNTTGG	2 cut(s)	1473, 1505
AloI	GAACNNNNNNTCC	2 cut(s)	2121, 2153
Alw21I	GWGCWC	1 cut(s)	469
Alw26I	GTCTC	3 cut(s)	587, 2237, 2467
Alw44I	GTGCAC	1 cut(s)	465
AlwI	GGATC	5 cut(s)	1137, 1393, 2189, 2273, 2286
AlwNI	CAGNNNCTG	4 cut(s)	58, 1532, 2126, 2494
Ama87I	CYCGRG	2 cut(s)	1882, 2171
Aor51HI	AGCGCT	1 cut(s)	75
AoxI	GGCC	5 cut(s)	472, 493, 631, 662, 2308
ApaLI	GTGCAC	1 cut(s)	465
ApeKI	GCWGC	8 cut(s)	8, 188, 438, 578, 1610, 1739, 1889, 1904
ApoI	RAATTY	7 cut(s)	16, 40, 718, 780, 1172, 1762, 1770
AseI	ATTAAT	1 cut(s)	321
AsiGI	ACCGGT	1 cut(s)	2351
Asp700I	GAANNNNTTC	1 cut(s)	2387
AspLEI	GCGC	3 cut(s)	76, 267, 1093
AspS9I	GGNCC	3 cut(s)	663, 1699, 2309
AsuHPI	GGTGA	2 cut(s)	1468, 2437
AsuII	TTCGAA	4 cut(s)	588, 1149, 1719, 1830
AvaI	CYCGRG	2 cut(s)	1882, 2171
AvaII	GGWCC	1 cut(s)	1699
AxyI	CCTNAGG	1 cut(s)	605
BaeGI	GKGCMC	1 cut(s)	469
BaeI	ACNNNNGTAYC	2 cut(s)	1620, 1653
BalI	TGGCCA	1 cut(s)	633
BamHI	GGATCC	1 cut(s)	2278
BanI	GGYRCC	2 cut(s)	609, 2114
BbsI	GAAGAC	3 cut(s)	247, 909, 947
Bbv12I	GWGCWC	1 cut(s)	469
BbvCI	CCTCAGC	3 cut(s)	696, 1515, 2273
BbvI	GCAGC	8 cut(s)	20, 175, 425, 565, 1622, 1751, 1876, 1891
BccI	CCATC	6 cut(s)	178, 565, 866, 1339, 1589, 1795
BceAI	ACGGC	1 cut(s)	677
BcgI	CGANNNNNNTGC	2 cut(s)	1820, 1854
BciT130I	CCWGG	4 cut(s)	59, 635, 904, 2226
BciVI	GTATCC	2 cut(s)	1084, 1621
BcoDI	GTCTC	3 cut(s)	587, 2237, 2467
BfaI	CTAG	3 cut(s)	68, 960, 1559
BfmI	CTRYAG	3 cut(s)	579, 889, 2301
BfoI	RGCGCY	2 cut(s)	77, 268
BfuI	GTATCC	2 cut(s)	1084, 1621
BglII	AGATCT	1 cut(s)	2560
BlpI	GCTNAGC	1 cut(s)	1317
Bme1390I	CCNGG	4 cut(s)	59, 635, 904, 2226
Bme18I	GGWCC	1 cut(s)	1699
BmeT110I	CYCGRG	2 cut(s)	1882, 2171
BmgBI	CACGTC	2 cut(s)	105, 272
BmgT120I	GGNCC	3 cut(s)	663, 1699, 2309
BmiI	GGNNCC	4 cut(s)	611, 1700, 2116, 2280
BmrFI	CCNGG	4 cut(s)	59, 635, 904, 2226
BmrI	ACTGGG	1 cut(s)	1058
BmsI	GCATC	1 cut(s)	682
BmuI	ACTGGG	1 cut(s)	1058
BoxI	GACNNNNGTC	1 cut(s)	247
BpiI	GAAGAC	3 cut(s)	247, 909, 947
BpmI	CTGGAG	2 cut(s)	350, 2148
Bpu10I	CCTNAGC	4 cut(s)	696, 1515, 1570, 2273
Bpu1102I	GCTNAGC	1 cut(s)	1317
Bpu14I	TTCGAA	4 cut(s)	588, 1149, 1719, 1830
BpuEI	CTTGAG	1 cut(s)	1463
Bsa29I	ATCGAT	1 cut(s)	1035
BsaBI	GATNNNNATC	1 cut(s)	1134
BsaI	GGTCTC	1 cut(s)	587
BsaWI	WCCGGW	2 cut(s)	2281, 2351
BsaXI	ACNNNNNCTCC	2 cut(s)	2121, 2151
Bsc4I	CCNNNNNNNGG	5 cut(s)	1183, 1559, 2111, 2197, 2231
Bse118I	RCCGGY	2 cut(s)	1937, 2351
Bse1I	ACTGG	6 cut(s)	1064, 1070, 1702, 2131, 2183, 2259
Bse21I	CCTNAGG	1 cut(s)	605
Bse3DI	GCAATG	5 cut(s)	349, 1836, 1899, 1935, 2490
Bse8I	GATNNNNATC	1 cut(s)	1134
BseBI	CCWGG	4 cut(s)	59, 635, 904, 2226
BseCI	ATCGAT	1 cut(s)	1035
BseGI	GGATG	3 cut(s)	1453, 1798, 1851
BseJI	GATNNNNATC	1 cut(s)	1134
BseLI	CCNNNNNNNGG	5 cut(s)	1183, 1559, 2111, 2197, 2231
BseMI	GCAATG	5 cut(s)	349, 1836, 1899, 1935, 2490
BseMII	CTCAG	7 cut(s)	65, 91, 227, 687, 1331, 1506, 2264
BseNI	ACTGG	6 cut(s)	1064, 1070, 1702, 2131, 2183, 2259
BseRI	GAGGAG	8 cut(s)	221, 365, 713, 891, 2015, 2387, 2390, 2393
BseSI	GKGCMC	1 cut(s)	469
BseXI	GCAGC	8 cut(s)	20, 175, 425, 565, 1622, 1751, 1876, 1891
BsgI	GTGCAG	2 cut(s)	1875, 2376
Bsh1236I	CGCG	2 cut(s)	148, 194
BshFI	GGCC	5 cut(s)	474, 495, 633, 664, 2310
BshNI	GGYRCC	2 cut(s)	609, 2114
BshTI	ACCGGT	1 cut(s)	2351
BshVI	ATCGAT	1 cut(s)	1035
BsiHKAI	GWGCWC	1 cut(s)	469
BsiHKCI	CYCGRG	2 cut(s)	1882, 2171
BsiSI	CCGG	3 cut(s)	1938, 2282, 2352
BslFI	GGGAC	3 cut(s)	322, 1712, 2471
BslI	CCNNNNNNNGG	5 cut(s)	1183, 1559, 2111, 2197, 2231
BsmAI	GTCTC	3 cut(s)	587, 2237, 2467
BsmFI	GGGAC	3 cut(s)	322, 1712, 2471
BsmI	GAATGC	2 cut(s)	429, 2012
BsnI	GGCC	5 cut(s)	474, 495, 633, 664, 2310
Bso31I	GGTCTC	1 cut(s)	587
BsoBI	CYCGRG	2 cut(s)	1882, 2171
Bsp119I	TTCGAA	4 cut(s)	588, 1149, 1719, 1830
Bsp1286I	GDGCHC	1 cut(s)	469
Bsp1720I	GCTNAGC	1 cut(s)	1317
Bsp19I	CCATGG	3 cut(s)	1694, 1917, 2037
BspACI	CCGC	9 cut(s)	5, 30, 146, 192, 194, 1539, 1812, 1845, 2290
BspANI	GGCC	5 cut(s)	474, 495, 633, 664, 2310
BspCNI	CTCAG	7 cut(s)	64, 90, 228, 688, 1330, 1507, 2265
BspDI	ATCGAT	1 cut(s)	1035
BspFNI	CGCG	2 cut(s)	148, 194
BspHI	TCATGA	1 cut(s)	1018
BspLI	GGNNCC	4 cut(s)	611, 1700, 2116, 2280
BspMAI	CTGCAG	1 cut(s)	583
BspPI	GGATC	5 cut(s)	1137, 1393, 2189, 2273, 2286
BspQI	GCTCTTC	4 cut(s)	57, 147, 332, 755
BspT104I	TTCGAA	4 cut(s)	588, 1149, 1719, 1830
BspT107I	GGYRCC	2 cut(s)	609, 2114
BspTNI	GGTCTC	1 cut(s)	587
BsrDI	GCAATG	5 cut(s)	349, 1836, 1899, 1935, 2490
BsrFI	RCCGGY	2 cut(s)	1937, 2351
BsrI	ACTGG	6 cut(s)	1064, 1070, 1702, 2131, 2183, 2259
BssAI	RCCGGY	2 cut(s)	1937, 2351
BssT1I	CCWWGG	6 cut(s)	260, 1422, 1694, 1855, 1917, 2037
Bst2UI	CCWGG	4 cut(s)	59, 635, 904, 2226
Bst4CI	ACNGT	4 cut(s)	1363, 1417, 1633, 2462
Bst6I	CTCTTC	7 cut(s)	57, 147, 332, 585, 755, 1084, 2378
BstAPI	GCANNNNNTGC	2 cut(s)	692, 1934
BstBI	TTCGAA	4 cut(s)	588, 1149, 1719, 1830
BstC8I	GCNNGC	1 cut(s)	1879
BstDEI	CTNAG	9 cut(s)	51, 77, 236, 605, 696, 1317, 1515, 1570, 2273
BstDSI	CCRYGG	6 cut(s)	192, 659, 723, 1694, 1917, 2037
BstENI	CCTNNNNNAGG	1 cut(s)	1557
BstF5I	GGATG	3 cut(s)	1453, 1798, 1851
BstFNI	CGCG	2 cut(s)	148, 194
BstH2I	RGCGCY	2 cut(s)	77, 268
BstHHI	GCGC	3 cut(s)	76, 267, 1093
BstMAI	GTCTC	3 cut(s)	587, 2237, 2467
BstMWI	GCNNNNNNNGC	9 cut(s)	73, 137, 194, 692, 1538, 1934, 2048, 2072, 2339
BstNI	CCWGG	4 cut(s)	59, 635, 904, 2226
BstNSI	RCATGY	1 cut(s)	2411
BstPAI	GACNNNNGTC	1 cut(s)	247
BstSCI	CCNGG	4 cut(s)	57, 633, 902, 2224
BstSFI	CTRYAG	3 cut(s)	579, 889, 2301
BstSLI	GKGCMC	1 cut(s)	469
BstUI	CGCG	2 cut(s)	148, 194
BstV1I	GCAGC	8 cut(s)	20, 175, 425, 565, 1622, 1751, 1876, 1891
BstV2I	GAAGAC	3 cut(s)	247, 909, 947
BstX2I	RGATCY	3 cut(s)	1129, 2278, 2560
BstYI	RGATCY	3 cut(s)	1129, 2278, 2560
Bsu15I	ATCGAT	1 cut(s)	1035
Bsu36I	CCTNAGG	1 cut(s)	605
BsuI	GTATCC	2 cut(s)	1084, 1621
BsuRI	GGCC	5 cut(s)	474, 495, 633, 664, 2310
BsuTUI	ATCGAT	1 cut(s)	1035
BtgI	CCRYGG	6 cut(s)	192, 659, 723, 1694, 1917, 2037
BtrI	CACGTC	2 cut(s)	105, 272
BtsCI	GGATG	3 cut(s)	1453, 1798, 1851
BtsI	GCAGTG	3 cut(s)	2265, 2364, 2495
BtsIMutI	CAGTG	9 cut(s)	85, 233, 469, 1115, 2252, 2265, 2364, 2467, 2495
Cac8I	GCNNGC	1 cut(s)	1879
CaiI	CAGNNNCTG	4 cut(s)	58, 1532, 2126, 2494
CciI	TCATGA	1 cut(s)	1018
CfoI	GCGC	3 cut(s)	76, 267, 1093
Cfr10I	RCCGGY	2 cut(s)	1937, 2351
Cfr13I	GGNCC	3 cut(s)	663, 1699, 2309
Cfr42I	CCGCGG	1 cut(s)	195
ClaI	ATCGAT	1 cut(s)	1035
CsiI	ACCWGGT	1 cut(s)	2224
CspAI	ACCGGT	1 cut(s)	2351
DdeI	CTNAG	9 cut(s)	51, 77, 236, 605, 696, 1317, 1515, 1570, 2273
DrdI	GACNNNNNNGTC	1 cut(s)	913
DseDI	GACNNNNNNGTC	1 cut(s)	913
EaeI	YGGCCR	1 cut(s)	631
Eam1104I	CTCTTC	7 cut(s)	57, 147, 332, 585, 755, 1084, 2378
EarI	CTCTTC	7 cut(s)	57, 147, 332, 585, 755, 1084, 2378
EciI	GGCGGA	1 cut(s)	45
Eco130I	CCWWGG	6 cut(s)	260, 1422, 1694, 1855, 1917, 2037
Eco147I	AGGCCT	1 cut(s)	474
Eco31I	GGTCTC	1 cut(s)	587
Eco32I	GATATC	1 cut(s)	1456
Eco47I	GGWCC	1 cut(s)	1699
Eco47III	AGCGCT	1 cut(s)	75
Eco57I	CTGAAG	3 cut(s)	356, 863, 1139
Eco81I	CCTNAGG	1 cut(s)	605
Eco88I	CYCGRG	2 cut(s)	1882, 2171
EcoNI	CCTNNNNNAGG	1 cut(s)	1557
EcoRI	GAATTC	5 cut(s)	16, 40, 780, 1172, 1762
EcoRII	CCWGG	4 cut(s)	57, 633, 902, 2224
EcoRV	GATATC	1 cut(s)	1456
EcoT14I	CCWWGG	6 cut(s)	260, 1422, 1694, 1855, 1917, 2037
EcoT22I	ATGCAT	1 cut(s)	2455
ErhI	CCWWGG	6 cut(s)	260, 1422, 1694, 1855, 1917, 2037
FalI	AAGNNNNNCTT	2 cut(s)	582, 614
FaqI	GGGAC	3 cut(s)	322, 1712, 2471
FauNDI	CATATG	1 cut(s)	1284
FokI	GGATG	3 cut(s)	1460, 1805, 1838
FspBI	CTAG	3 cut(s)	68, 960, 1559
GlaI	GCGC	3 cut(s)	75, 266, 1092
GsuI	CTGGAG	2 cut(s)	350, 2148
HaeII	RGCGCY	2 cut(s)	77, 268
HaeIII	GGCC	5 cut(s)	474, 495, 633, 664, 2310
HapII	CCGG	3 cut(s)	1938, 2282, 2352
HhaI	GCGC	3 cut(s)	76, 267, 1093
Hin6I	GCGC	3 cut(s)	74, 265, 1091
HinP1I	GCGC	3 cut(s)	74, 265, 1091
HincII	GTYRAC	1 cut(s)	1992
HindII	GTYRAC	1 cut(s)	1992
HindIII	AAGCTT	2 cut(s)	897, 2049
HpaI	GTTAAC	1 cut(s)	1992
HpaII	CCGG	3 cut(s)	1938, 2282, 2352
HphI	GGTGA	2 cut(s)	1468, 2437
Hpy166II	GTNNAC	5 cut(s)	108, 467, 776, 1992, 2637
Hpy188I	TCNGA	3 cut(s)	843, 858, 1213
Hpy8I	GTNNAC	5 cut(s)	108, 467, 776, 1992, 2637
HpyCH4III	ACNGT	4 cut(s)	1363, 1417, 1633, 2462
HpyCH4IV	ACGT	3 cut(s)	104, 244, 271
HpyF10VI	GCNNNNNNNGC	9 cut(s)	73, 137, 194, 692, 1538, 1934, 2048, 2072, 2339
HpyF3I	CTNAG	9 cut(s)	51, 77, 236, 605, 696, 1317, 1515, 1570, 2273
HpySE526I	ACGT	3 cut(s)	104, 244, 271
HspAI	GCGC	3 cut(s)	74, 265, 1091
KspAI	GTTAAC	1 cut(s)	1992
KspI	CCGCGG	1 cut(s)	195
LguI	GCTCTTC	4 cut(s)	57, 147, 332, 755
LmnI	GCTCC	8 cut(s)	60, 331, 539, 575, 700, 832, 1511, 2571
Lsp1109I	GCAGC	8 cut(s)	20, 175, 425, 565, 1622, 1751, 1876, 1891
LweI	GCATC	1 cut(s)	682
MabI	ACCWGGT	1 cut(s)	2224
MaeI	CTAG	3 cut(s)	68, 960, 1559
MaeII	ACGT	3 cut(s)	104, 244, 271
MaeIII	GTNAC	4 cut(s)	84, 565, 1417, 1601
MfeI	CAATTG	1 cut(s)	2641
MflI	RGATCY	3 cut(s)	1129, 2278, 2560
MhlI	GDGCHC	1 cut(s)	469
MlsI	TGGCCA	1 cut(s)	633
MluNI	TGGCCA	1 cut(s)	633
MlyI	GAGTC	6 cut(s)	92, 742, 758, 985, 1743, 2042
MmeI	TCCRAC	3 cut(s)	69, 862, 2392
Mox20I	TGGCCA	1 cut(s)	633
Mph1103I	ATGCAT	1 cut(s)	2455
MroXI	GAANNNNTTC	1 cut(s)	2387
MscI	TGGCCA	1 cut(s)	633
MseI	TTAA	4 cut(s)	321, 1326, 1991, 2420
MslI	CAYNNNNRTG	1 cut(s)	422
Msp20I	TGGCCA	1 cut(s)	633
MspA1I	CMGCKG	5 cut(s)	194, 328, 438, 739, 2272
MspI	CCGG	3 cut(s)	1938, 2282, 2352
MspR9I	CCNGG	4 cut(s)	59, 635, 904, 2226
MunI	CAATTG	1 cut(s)	2641
Mva1269I	GAATGC	2 cut(s)	429, 2012
MvaI	CCWGG	4 cut(s)	59, 635, 904, 2226
MvnI	CGCG	2 cut(s)	148, 194
MwoI	GCNNNNNNNGC	9 cut(s)	73, 137, 194, 692, 1538, 1934, 2048, 2072, 2339
NcoI	CCATGG	3 cut(s)	1694, 1917, 2037
NdeI	CATATG	1 cut(s)	1284
NlaIV	GGNNCC	4 cut(s)	611, 1700, 2116, 2280
NmuCI	GTSAC	2 cut(s)	84, 565
NsiI	ATGCAT	1 cut(s)	2455
NspI	RCATGY	1 cut(s)	2411
NspV	TTCGAA	4 cut(s)	588, 1149, 1719, 1830
PaeR7I	CTCGAG	2 cut(s)	1882, 2171
PagI	TCATGA	1 cut(s)	1018
PceI	AGGCCT	1 cut(s)	474
PciSI	GCTCTTC	4 cut(s)	57, 147, 332, 755
PcsI	WCGNNNNNNNCGW	1 cut(s)	1371
PctI	GAATGC	2 cut(s)	429, 2012
PdmI	GAANNNNTTC	1 cut(s)	2387
PflMI	CCANNNNNTGG	3 cut(s)	2111, 2197, 2231
PfoI	TCCNGGA	2 cut(s)	57, 902
PinAI	ACCGGT	1 cut(s)	2351
PleI	GAGTC	6 cut(s)	91, 741, 757, 985, 1743, 2041
PpsI	GAGTC	6 cut(s)	91, 741, 757, 985, 1743, 2041
PshAI	GACNNNNGTC	1 cut(s)	247
PshBI	ATTAAT	1 cut(s)	321
Psp6I	CCWGG	4 cut(s)	57, 633, 902, 2224
PspGI	CCWGG	4 cut(s)	57, 633, 902, 2224
PspN4I	GGNNCC	4 cut(s)	611, 1700, 2116, 2280
PspPI	GGNCC	3 cut(s)	663, 1699, 2309
PspXI	VCTCGAGB	2 cut(s)	1882, 2171
PstI	CTGCAG	1 cut(s)	583
PstNI	CAGNNNCTG	4 cut(s)	58, 1532, 2126, 2494
PsuI	RGATCY	3 cut(s)	1129, 2278, 2560
PvuII	CAGCTG	4 cut(s)	328, 438, 739, 2272
RseI	CAYNNNNRTG	1 cut(s)	422
SacII	CCGCGG	1 cut(s)	195
SapI	GCTCTTC	4 cut(s)	57, 147, 332, 755
SaqAI	TTAA	4 cut(s)	321, 1326, 1991, 2420
Sau96I	GGNCC	3 cut(s)	663, 1699, 2309
SchI	GAGTC	6 cut(s)	92, 742, 758, 985, 1743, 2042
ScrFI	CCNGG	4 cut(s)	59, 635, 904, 2226
SduI	GDGCHC	1 cut(s)	469
SexAI	ACCWGGT	1 cut(s)	2224
SfaNI	GCATC	1 cut(s)	682
SfcI	CTRYAG	3 cut(s)	579, 889, 2301
Sfr274I	CTCGAG	2 cut(s)	1882, 2171
Sfr303I	CCGCGG	1 cut(s)	195
SfuI	TTCGAA	4 cut(s)	588, 1149, 1719, 1830
SgrAI	CRCCGGYG	1 cut(s)	2351
SgrBI	CCGCGG	1 cut(s)	195
SinI	GGWCC	1 cut(s)	1699
SlaI	CTCGAG	2 cut(s)	1882, 2171
SmiMI	CAYNNNNRTG	1 cut(s)	422
SmlI	CTYRAG	3 cut(s)	1442, 1882, 2171
SmoI	CTYRAG	3 cut(s)	1442, 1882, 2171
SseBI	AGGCCT	1 cut(s)	474
SsiI	CCGC	9 cut(s)	5, 30, 146, 192, 194, 1539, 1812, 1845, 2290
SspI	AATATT	1 cut(s)	1395
SspMI	CTAG	3 cut(s)	68, 960, 1559
StuI	AGGCCT	1 cut(s)	474
StyD4I	CCNGG	4 cut(s)	57, 633, 902, 2224
StyI	CCWWGG	6 cut(s)	260, 1422, 1694, 1855, 1917, 2037
TaaI	ACNGT	4 cut(s)	1363, 1417, 1633, 2462
TaiI	ACGT	3 cut(s)	107, 247, 274
TauI	GCSGC	3 cut(s)	8, 194, 197
Tru1I	TTAA	4 cut(s)	321, 1326, 1991, 2420
Tru9I	TTAA	4 cut(s)	321, 1326, 1991, 2420
TscAI	CASTG	9 cut(s)	85, 240, 469, 1122, 2259, 2265, 2364, 2467, 2495
TseFI	GTSAC	2 cut(s)	84, 565
TseI	GCWGC	8 cut(s)	8, 188, 438, 578, 1610, 1739, 1889, 1904
Tsp45I	GTSAC	2 cut(s)	84, 565
TspGWI	ACGGA	2 cut(s)	552, 712
TspRI	CASTG	9 cut(s)	85, 240, 469, 1122, 2259, 2265, 2364, 2467, 2495
Van91I	CCANNNNNTGG	3 cut(s)	2111, 2197, 2231
VneI	GTGCAC	1 cut(s)	465
VpaK11BI	GGWCC	1 cut(s)	1699
VspI	ATTAAT	1 cut(s)	321
XagI	CCTNNNNNAGG	1 cut(s)	1557
XapI	RAATTY	7 cut(s)	16, 40, 718, 780, 1172, 1762, 1770
XceI	RCATGY	1 cut(s)	2411
XcmI	CCANNNNNNNNNTGG	4 cut(s)	666, 1621, 1709, 2198
XhoI	CTCGAG	2 cut(s)	1882, 2171
XmnI	GAANNNNTTC	1 cut(s)	2387
XspI	CTAG	3 cut(s)	68, 960, 1559
Zsp2I	ATGCAT	1 cut(s)	2455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.