Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0003561

Physical Location & Seq

Genomic Coordinates Reverse (-)

60284772 .. 60290171

Gene Structure 5400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG420900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGGCGAAGCAGGCCAACAATGCGTGGATTATGCAGAAGAAGAAATGGTCTCTGGTGGTTCTGGCATTGTTTTCTCTCTCCACCGCTATGGTTTTCTTCATGAGAACCGCGTTTGATTCCTGCAACGCAAATAGTAGCGGCAGTCGTTTTGAAGATGATAATAGAGCCGCCGCCGAGGCGGTGAGAGTTGTCCGGAACGACGCCGGACCGAGCCCTCTGCGGTTCATGAAGTCGAAGCTGGTTCTGTTGGTCTCACACGAGCTCTCTCTTTCCGGGGGTCCTTTGTTGTTGATGGAGCTGGCGTTCTTGTTGAGAGGGGTGGGATCGGAGGTTGTTTGGATAACAAGCCAAAAGCCACCGGAATCCGACGAGGTGATTTACAGTTTGGAGAATAAAATGCTGGACCGAGGAGTACAGGTCCTCTCTGCAAAGGGTCAAAAGGCTATAGATACAGCTCTTAAGGCAGATTTGGTCATTTTAAATACTGCTGTTGCTGGAAAATGGCTGGATGCTGTTCTCAGGGAAAACGTTCCTCATGTTCTTCCTAAGGTGTTGTGGTGGATTCATGAAATGCGAGGGCATTATTTCAATGTGGAGTATGTTAAGCACCTCCCTTTTGTTGCAGGTGCCATGATTGATTCACACACAACAGCAGAATATTGGAAAAATAGGACTCGGGAACGTTTAGGGATTAAAATGCCTAAAACCTATGTTGTGCACCTTGGAAATAGCAAGGAGCTAATGGAAGTTGCAGAAGATAGTGTATCCAGGAGGGTTCTCCGTGAACATGTCCGAGAGTCTCTTGGAGTGCGGAATGAAGATCTACTCTTTGCCATCATAAACAGTGTTTCACGTGCGAAAGGTCAGGATCTATTTCTTCGCGCTTTTCATGAAAGTCTGCAATTCGTCAAGGAGAAGAAATTGCAAGTGCCATCTATGCATGCAGTAATAGTGGGAAGTGACATGGATAAGCAGACTAAATTTGAAACGGAACTGCAAAACTTTGTGATAGAAAAGAAGCTTCAGGATTGTGTTCACTTTGTGAACAAAACCCTGACTGTGGCTCCTTATCTGGCTTCTATTGACGTTCTTGTTCAAAATTCTCAGGCTCGAGGAGAGTGCTTTGGAAGGATAACTATTGAAGCAATGGCCTTTCAGCTACCTGTACTGGGCACAGCAGCTGGGGGAACCATGGAGATTGTAGTGAATGGCTCAACCGGACTGCTGCATCCTGTTGGTAAAGAAGGTGTGGCATCGCTGACAAATAACATCATAAAATTGGCCACACATGTAGAAAGGAGATTGACAATGGGCAAGAAGGGATACGAGAGAGTGAAGGAAAGATTTCTGGAACCGCACATGGTGCAAAGGATCGCTTTAGTTTTAAGGGAGGTGTTGCAGAAAGCAAAGAGCCACGCCAATTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_trans_4_5 Glycos_transf_1

Protein Analysis

475

Amino Acids

53.21

Weight (kDa)

9.43

Isoelectric Point (pI)

37.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_trans_4_5	PF16994	77 - 255	2e-71	Glycosyl-transferase family 4
Glycos_transf_1	PF00534	262 - 444	1.1e-21	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	283 - 429	1.6e-18	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003561)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19710 AT1G75420 AT1G75420 AT1G75420
fragaria_vesca	FvH4_1g12520 FvH4_2g39300 FvH4_2g39300
malus_domestica	MD02G1139400.v1.1 MD15G1022300.v1.1 MD15G1252500.v1.1
prunus_persica	Prupe.1G374100_v2.0.a1 Prupe.7G161700_v2.0.a1 Prupe.7G161700_v2.0.a1
pyrus_communis	pycom02g11010 pycom15g01860 pycom15g22240
rosa_chinensis	RchiOBHm_Chr2g0100451 RchiOBHm_Chr6g0301701
rosa_laevigata	RLG00000011230 RLG00000016974
rosa_multiflora	Rmu_sc0000528.1_g000027 Rmu_sc0001095.1_g000003 Rmu_sc0034934.1_g000003
rosa_roxburghii	Rroxscaffold_2G00142240 Rroxscaffold_7G00166500
rosa_rugosa	Rorug02G0088200 Rorug06G0308200
rosa_samantha	Rh2AG137900 Rh2BG141100 Rh2DG142700 Rh6AG420700 Rh6BG427400 Rh6DG420900
rosa_wichuraiana	Rw2G010770 Rw6G036410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	614
Acc36I	ACCTGC	1 cut(s)	614
AccB1I	GGYRCC	1 cut(s)	626
AccII	CGCG	2 cut(s)	110, 882
AccIII	TCCGGA	1 cut(s)	192
AciI	CCGC	9 cut(s)	84, 108, 138, 168, 171, 179, 220, 811, 1355
AclI	AACGTT	2 cut(s)	528, 682
AclWI	GGATC	3 cut(s)	331, 876, 1379
AcoI	YGGCCR	1 cut(s)	1281
AcsI	RAATTY	2 cut(s)	980, 1099
AcuI	CTGAAG	1 cut(s)	1007
AcvI	CACGTG	1 cut(s)	854
AcyI	GRCGYC	1 cut(s)	201
AdeI	CACNNNGTG	2 cut(s)	1042, 1363
AfaI	GTAC	2 cut(s)	414, 1167
AfiI	CCNNNNNNNGG	2 cut(s)	1060, 1169
AflII	CTTAAG	1 cut(s)	458
AflIII	ACRYGT	2 cut(s)	787, 1288
AgsI	TTSAA	5 cut(s)	152, 589, 986, 1097, 1142
AjnI	CCWGG	1 cut(s)	767
AloI	GAACNNNNNNTCC	2 cut(s)	287, 319
AluBI	AGCT	8 cut(s)	238, 262, 298, 455, 739, 1021, 1159, 1181
AluI	AGCT	8 cut(s)	238, 262, 298, 455, 739, 1021, 1159, 1181
Alw21I	GWGCWC	2 cut(s)	264, 720
Alw26I	GTCTC	3 cut(s)	54, 256, 804
Alw44I	GTGCAC	1 cut(s)	716
AlwI	GGATC	3 cut(s)	331, 876, 1379
AlwNI	CAGNNNCTG	1 cut(s)	1181
Ama87I	CYCGRG	2 cut(s)	675, 1110
Aor13HI	TCCGGA	1 cut(s)	192
AoxI	GGCC	3 cut(s)	12, 1149, 1281
ApaLI	GTGCAC	1 cut(s)	716
ApeKI	GCWGC	2 cut(s)	1178, 1225
ApoI	RAATTY	2 cut(s)	980, 1099
Asp700I	GAANNNNTTC	2 cut(s)	528, 1344
AspLEI	GCGC	1 cut(s)	884
AspS9I	GGNCC	4 cut(s)	206, 278, 403, 418
AsuC2I	CCSGG	1 cut(s)	274
AsuHPI	GGTGA	2 cut(s)	193, 385
AvaI	CYCGRG	2 cut(s)	675, 1110
AvaII	GGWCC	4 cut(s)	206, 278, 403, 418
AxyI	CCTNAGG	1 cut(s)	546
BaeGI	GKGCMC	2 cut(s)	720, 1175
BalI	TGGCCA	1 cut(s)	1283
BanI	GGYRCC	1 cut(s)	626
BanII	GRGCYC	2 cut(s)	215, 264
BauI	CACGAG	1 cut(s)	257
BbrPI	CACGTG	1 cut(s)	854
Bbv12I	GWGCWC	2 cut(s)	264, 720
BbvI	GCAGC	2 cut(s)	1190, 1212
BccI	CCATC	3 cut(s)	286, 842, 940
BcgI	CGANNNNNNTGC	4 cut(s)	199, 233, 1101, 1135
BciT130I	CCWGG	1 cut(s)	769
BciVI	GTATCC	2 cut(s)	775, 1316
BcnI	CCSGG	1 cut(s)	274
BcoDI	GTCTC	3 cut(s)	54, 256, 804
BfmI	CTRYAG	1 cut(s)	444
BfrI	CTTAAG	1 cut(s)	458
BfuAI	ACCTGC	1 cut(s)	614
BfuI	GTATCC	2 cut(s)	775, 1316
BglI	GCCNNNNNGGC	1 cut(s)	176
BglII	AGATCT	1 cut(s)	820
BisI	GCNGC	5 cut(s)	139, 168, 171, 1179, 1226
BlsI	GCNGC	5 cut(s)	140, 169, 172, 1180, 1227
Bme1390I	CCNGG	2 cut(s)	274, 769
Bme18I	GGWCC	4 cut(s)	206, 278, 403, 418
BmeT110I	CYCGRG	2 cut(s)	675, 1110
BmgT120I	GGNCC	4 cut(s)	206, 278, 403, 418
BmiI	GGNNCC	5 cut(s)	279, 628, 1065, 1189, 1353
BmrFI	CCNGG	2 cut(s)	274, 769
BmrI	ACTGGG	1 cut(s)	1178
BmsI	GCATC	3 cut(s)	499, 1237, 1262
BmuI	ACTGGG	1 cut(s)	1178
BpuMI	CCSGG	1 cut(s)	274
BsaAI	YACGTR	1 cut(s)	854
BsaHI	GRCGYC	1 cut(s)	201
BsaI	GGTCTC	2 cut(s)	54, 256
BsaJI	CCNNGG	5 cut(s)	174, 273, 406, 721, 1191
BsaWI	WCCGGW	3 cut(s)	192, 358, 1217
BsaXI	ACNNNNNCTCC	6 cut(s)	287, 317, 402, 432, 1048, 1078
Bsc4I	CCNNNNNNNGG	2 cut(s)	1060, 1169
Bse1I	ACTGG	1 cut(s)	1173
Bse21I	CCTNAGG	1 cut(s)	546
Bse3DI	GCAATG	1 cut(s)	1152
BseAI	TCCGGA	1 cut(s)	192
BseBI	CCWGG	1 cut(s)	769
BseDI	CCNNGG	5 cut(s)	174, 273, 406, 721, 1191
BseGI	GGATG	2 cut(s)	514, 1228
BseLI	CCNNNNNNNGG	2 cut(s)	1060, 1169
BseMI	GCAATG	1 cut(s)	1152
BseMII	CTCAG	2 cut(s)	532, 1118
BseNI	ACTGG	1 cut(s)	1173
BseRI	GAGGAG	2 cut(s)	423, 1128
BseSI	GKGCMC	2 cut(s)	720, 1175
BseXI	GCAGC	2 cut(s)	1190, 1212
BseYI	CCCAGC	1 cut(s)	1181
Bsh1236I	CGCG	2 cut(s)	110, 882
BshFI	GGCC	3 cut(s)	14, 1151, 1283
BshNI	GGYRCC	1 cut(s)	626
BsiHKAI	GWGCWC	2 cut(s)	264, 720
BsiHKCI	CYCGRG	2 cut(s)	675, 1110
BsiSI	CCGG	5 cut(s)	193, 204, 273, 359, 1218
BslI	CCNNNNNNNGG	2 cut(s)	1060, 1169
BsmAI	GTCTC	3 cut(s)	54, 256, 804
BsnI	GGCC	3 cut(s)	14, 1151, 1283
Bso31I	GGTCTC	2 cut(s)	54, 256
BsoBI	CYCGRG	2 cut(s)	675, 1110
Bsp1286I	GDGCHC	4 cut(s)	215, 264, 720, 1175
Bsp13I	TCCGGA	1 cut(s)	192
Bsp143I	GATC	4 cut(s)	323, 820, 868, 1371
Bsp19I	CCATGG	1 cut(s)	1191
BspACI	CCGC	9 cut(s)	84, 108, 138, 168, 171, 179, 220, 811, 1355
BspANI	GGCC	3 cut(s)	14, 1151, 1283
BspCNI	CTCAG	2 cut(s)	531, 1117
BspEI	TCCGGA	1 cut(s)	192
BspFNI	CGCG	2 cut(s)	110, 882
BspHI	TCATGA	4 cut(s)	99, 225, 565, 889
BspLI	GGNNCC	5 cut(s)	279, 628, 1065, 1189, 1353
BspMI	ACCTGC	1 cut(s)	614
BspPI	GGATC	3 cut(s)	331, 876, 1379
BspT107I	GGYRCC	1 cut(s)	626
BspTI	CTTAAG	1 cut(s)	458
BspTNI	GGTCTC	2 cut(s)	54, 256
BsrDI	GCAATG	1 cut(s)	1152
BsrI	ACTGG	1 cut(s)	1173
BssECI	CCNNGG	5 cut(s)	174, 273, 406, 721, 1191
BssMI	GATC	4 cut(s)	323, 820, 868, 1371
BssNI	GRCGYC	1 cut(s)	201
BssSI	CACGAG	1 cut(s)	257
BssT1I	CCWWGG	2 cut(s)	721, 1191
Bst2BI	CACGAG	1 cut(s)	257
Bst2UI	CCWGG	1 cut(s)	769
Bst4CI	ACNGT	3 cut(s)	383, 845, 1060
BstACI	GRCGYC	1 cut(s)	201
BstAFI	CTTAAG	1 cut(s)	458
BstAPI	GCANNNNNTGC	1 cut(s)	1363
BstBAI	YACGTR	1 cut(s)	854
BstC8I	GCNNGC	3 cut(s)	12, 300, 942
BstDEI	CTNAG	3 cut(s)	518, 546, 1104
BstDSI	CCRYGG	1 cut(s)	1191
BstF5I	GGATG	2 cut(s)	514, 1228
BstFNI	CGCG	2 cut(s)	110, 882
BstHHI	GCGC	1 cut(s)	884
BstKTI	GATC	4 cut(s)	326, 823, 871, 1374
BstMAI	GTCTC	3 cut(s)	54, 256, 804
BstMBI	GATC	4 cut(s)	323, 820, 868, 1371
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 20, 176, 461, 937, 1363
BstNI	CCWGG	1 cut(s)	769
BstNSI	RCATGY	3 cut(s)	791, 944, 1292
BstSCI	CCNGG	2 cut(s)	272, 767
BstSFI	CTRYAG	1 cut(s)	444
BstSLI	GKGCMC	2 cut(s)	720, 1175
BstUI	CGCG	2 cut(s)	110, 882
BstV1I	GCAGC	2 cut(s)	1190, 1212
BstX2I	RGATCY	2 cut(s)	820, 868
BstXI	CCANNNNNNTGG	1 cut(s)	88
BstYI	RGATCY	2 cut(s)	820, 868
Bsu36I	CCTNAGG	1 cut(s)	546
BsuI	GTATCC	2 cut(s)	775, 1316
BsuRI	GGCC	3 cut(s)	14, 1151, 1283
BtgI	CCRYGG	1 cut(s)	1191
BtgZI	GCGATG	1 cut(s)	1239
BtsCI	GGATG	2 cut(s)	514, 1228
BtsIMutI	CAGTG	1 cut(s)	850
BveI	ACCTGC	1 cut(s)	614
Cac8I	GCNNGC	3 cut(s)	12, 300, 942
CaiI	CAGNNNCTG	1 cut(s)	1181
CciI	TCATGA	4 cut(s)	99, 225, 565, 889
CfoI	GCGC	1 cut(s)	884
Cfr13I	GGNCC	4 cut(s)	206, 278, 403, 418
CpoI	CGGWCCG	1 cut(s)	206
CseI	GACGC	1 cut(s)	209
Csp6I	GTAC	2 cut(s)	413, 1166
CspI	CGGWCCG	1 cut(s)	206
CviQI	GTAC	2 cut(s)	413, 1166
DdeI	CTNAG	3 cut(s)	518, 546, 1104
DpnI	GATC	4 cut(s)	325, 822, 870, 1373
DpnII	GATC	4 cut(s)	323, 820, 868, 1371
DraI	TTTAAA	1 cut(s)	480
DraIII	CACNNNGTG	2 cut(s)	1042, 1363
EaeI	YGGCCR	1 cut(s)	1281
Ecl136II	GAGCTC	1 cut(s)	262
Eco130I	CCWWGG	2 cut(s)	721, 1191
Eco24I	GRGCYC	2 cut(s)	215, 264
Eco31I	GGTCTC	2 cut(s)	54, 256
Eco47I	GGWCC	4 cut(s)	206, 278, 403, 418
Eco53kI	GAGCTC	1 cut(s)	262
Eco57I	CTGAAG	1 cut(s)	1007
Eco72I	CACGTG	1 cut(s)	854
Eco81I	CCTNAGG	1 cut(s)	546
Eco88I	CYCGRG	2 cut(s)	675, 1110
EcoICRI	GAGCTC	1 cut(s)	262
EcoO109I	RGGNCCY	2 cut(s)	278, 418
EcoRII	CCWGG	1 cut(s)	767
EcoT14I	CCWWGG	2 cut(s)	721, 1191
EcoT22I	ATGCAT	1 cut(s)	942
EcoT38I	GRGCYC	2 cut(s)	215, 264
ErhI	CCWWGG	2 cut(s)	721, 1191
FalI	AAGNNNNNCTT	2 cut(s)	1360, 1392
Fnu4HI	GCNGC	5 cut(s)	139, 168, 171, 1179, 1226
FokI	GGATG	2 cut(s)	521, 1215
FriOI	GRGCYC	2 cut(s)	215, 264
Fsp4HI	GCNGC	5 cut(s)	139, 168, 171, 1179, 1226
GlaI	GCGC	1 cut(s)	883
GluI	GCNGC	5 cut(s)	139, 168, 171, 1179, 1226
GsaI	CCCAGC	1 cut(s)	1185
HaeIII	GGCC	3 cut(s)	14, 1151, 1283
HapII	CCGG	5 cut(s)	193, 204, 273, 359, 1218
HgaI	GACGC	1 cut(s)	209
HhaI	GCGC	1 cut(s)	884
Hin1I	GRCGYC	1 cut(s)	201
Hin6I	GCGC	1 cut(s)	882
HinP1I	GCGC	1 cut(s)	882
HindIII	AAGCTT	1 cut(s)	1019
HinfI	GANTC	6 cut(s)	116, 362, 562, 638, 673, 797
HpaII	CCGG	5 cut(s)	193, 204, 273, 359, 1218
HphI	GGTGA	2 cut(s)	193, 385
Hpy166II	GTNNAC	4 cut(s)	718, 785, 1036, 1045
Hpy188I	TCNGA	3 cut(s)	328, 367, 794
Hpy188III	TCNNGA	9 cut(s)	100, 193, 226, 566, 677, 866, 890, 1025, 1349
Hpy8I	GTNNAC	4 cut(s)	718, 785, 1036, 1045
Hpy99I	CGWCG	2 cut(s)	203, 371
HpyAV	CCTTC	4 cut(s)	1122, 1238, 1312, 1330
HpyCH4III	ACNGT	3 cut(s)	383, 845, 1060
HpyCH4IV	ACGT	4 cut(s)	528, 682, 853, 1086
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 20, 176, 461, 937, 1363
HpyF3I	CTNAG	3 cut(s)	518, 546, 1104
HpySE526I	ACGT	4 cut(s)	528, 682, 853, 1086
Hsp92I	GRCGYC	1 cut(s)	201
HspAI	GCGC	1 cut(s)	882
Kpn2I	TCCGGA	1 cut(s)	192
Kzo9I	GATC	4 cut(s)	323, 820, 868, 1371
LmnI	GCTCC	3 cut(s)	295, 736, 1069
Lsp1109I	GCAGC	2 cut(s)	1190, 1212
LweI	GCATC	3 cut(s)	499, 1237, 1262
MaeII	ACGT	4 cut(s)	528, 682, 853, 1086
MaeIII	GTNAC	1 cut(s)	959
MalI	GATC	4 cut(s)	325, 822, 870, 1373
MboI	GATC	4 cut(s)	323, 820, 868, 1371
MboII	GAAGA	9 cut(s)	49, 52, 88, 164, 533, 767, 830, 869, 928
MflI	RGATCY	2 cut(s)	820, 868
MhlI	GDGCHC	4 cut(s)	215, 264, 720, 1175
MlsI	TGGCCA	1 cut(s)	1283
MluCI	AATT	6 cut(s)	902, 920, 980, 1099, 1277, 1420
MluNI	TGGCCA	1 cut(s)	1283
MlyI	GAGTC	2 cut(s)	667, 806
MmeI	TCCRAC	1 cut(s)	390
Mox20I	TGGCCA	1 cut(s)	1283
Mph1103I	ATGCAT	1 cut(s)	942
MroI	TCCGGA	1 cut(s)	192
MroXI	GAANNNNTTC	2 cut(s)	528, 1344
MscI	TGGCCA	1 cut(s)	1283
MseI	TTAA	5 cut(s)	459, 479, 603, 693, 1385
MslI	CAYNNNNRTG	1 cut(s)	86
Msp20I	TGGCCA	1 cut(s)	1283
MspA1I	CMGCKG	1 cut(s)	1181
MspCI	CTTAAG	1 cut(s)	458
MspI	CCGG	5 cut(s)	193, 204, 273, 359, 1218
MspR9I	CCNGG	2 cut(s)	274, 769
MvaI	CCWGG	1 cut(s)	769
MvnI	CGCG	2 cut(s)	110, 882
MwoI	GCNNNNNNNGC	6 cut(s)	11, 20, 176, 461, 937, 1363
NciI	CCSGG	1 cut(s)	274
NcoI	CCATGG	1 cut(s)	1191
NdeII	GATC	4 cut(s)	323, 820, 868, 1371
NlaIV	GGNNCC	5 cut(s)	279, 628, 1065, 1189, 1353
NmeAIII	GCCGAG	1 cut(s)	199
NmuCI	GTSAC	1 cut(s)	959
NsiI	ATGCAT	1 cut(s)	942
NspI	RCATGY	3 cut(s)	791, 944, 1292
PaeI	GCATGC	1 cut(s)	944
PaeR7I	CTCGAG	1 cut(s)	1110
PagI	TCATGA	4 cut(s)	99, 225, 565, 889
PaqCI	CACCTGC	1 cut(s)	614
PciI	ACATGT	2 cut(s)	787, 1288
PdmI	GAANNNNTTC	2 cut(s)	528, 1344
PfeI	GAWTC	4 cut(s)	116, 362, 562, 638
PfoI	TCCNGGA	1 cut(s)	767
PkrI	GCNGC	5 cut(s)	140, 169, 172, 1180, 1227
PleI	GAGTC	2 cut(s)	667, 805
PmaCI	CACGTG	1 cut(s)	854
PmlI	CACGTG	1 cut(s)	854
PpsI	GAGTC	2 cut(s)	667, 805
Ppu21I	YACGTR	1 cut(s)	854
PpuMI	RGGWCCY	2 cut(s)	278, 418
PscI	ACATGT	2 cut(s)	787, 1288
Psp124BI	GAGCTC	1 cut(s)	264
Psp1406I	AACGTT	2 cut(s)	528, 682
Psp5II	RGGWCCY	2 cut(s)	278, 418
Psp6I	CCWGG	1 cut(s)	767
PspCI	CACGTG	1 cut(s)	854
PspFI	CCCAGC	1 cut(s)	1181
PspGI	CCWGG	1 cut(s)	767
PspN4I	GGNNCC	5 cut(s)	279, 628, 1065, 1189, 1353
PspPI	GGNCC	4 cut(s)	206, 278, 403, 418
PspPPI	RGGWCCY	2 cut(s)	278, 418
PspXI	VCTCGAGB	1 cut(s)	1110
PstNI	CAGNNNCTG	1 cut(s)	1181
PsuI	RGATCY	2 cut(s)	820, 868
PvuII	CAGCTG	1 cut(s)	1181
RsaI	GTAC	2 cut(s)	414, 1167
RsaNI	GTAC	2 cut(s)	413, 1166
RseI	CAYNNNNRTG	1 cut(s)	86
Rsr2I	CGGWCCG	1 cut(s)	206
RsrII	CGGWCCG	1 cut(s)	206
SacI	GAGCTC	1 cut(s)	264
SaqAI	TTAA	5 cut(s)	459, 479, 603, 693, 1385
SatI	GCNGC	5 cut(s)	139, 168, 171, 1179, 1226
Sau3AI	GATC	4 cut(s)	323, 820, 868, 1371
Sau96I	GGNCC	4 cut(s)	206, 278, 403, 418
SchI	GAGTC	2 cut(s)	667, 806
ScrFI	CCNGG	2 cut(s)	274, 769
SduI	GDGCHC	4 cut(s)	215, 264, 720, 1175
SfaNI	GCATC	3 cut(s)	499, 1237, 1262
SfcI	CTRYAG	1 cut(s)	444
Sfr274I	CTCGAG	1 cut(s)	1110
SinI	GGWCC	4 cut(s)	206, 278, 403, 418
SlaI	CTCGAG	1 cut(s)	1110
SmiMI	CAYNNNNRTG	1 cut(s)	86
SmlI	CTYRAG	2 cut(s)	458, 1110
SmoI	CTYRAG	2 cut(s)	458, 1110
SphI	GCATGC	1 cut(s)	944
Sse9I	AATT	6 cut(s)	902, 920, 980, 1099, 1277, 1420
SsiI	CCGC	9 cut(s)	84, 108, 138, 168, 171, 179, 220, 811, 1355
SspI	AATATT	1 cut(s)	659
SstI	GAGCTC	1 cut(s)	264
StyD4I	CCNGG	2 cut(s)	272, 767
StyI	CCWWGG	2 cut(s)	721, 1191
TaaI	ACNGT	3 cut(s)	383, 845, 1060
TaiI	ACGT	4 cut(s)	531, 685, 856, 1089
TaqI	TCGA	2 cut(s)	233, 1111
TaqII	GACCGA	2 cut(s)	223, 420
TasI	AATT	6 cut(s)	902, 920, 980, 1099, 1277, 1420
TatI	WGTACW	2 cut(s)	412, 1165
TauI	GCSGC	3 cut(s)	141, 170, 173
TfiI	GAWTC	4 cut(s)	116, 362, 562, 638
Tru1I	TTAA	5 cut(s)	459, 479, 603, 693, 1385
Tru9I	TTAA	5 cut(s)	459, 479, 603, 693, 1385
TscAI	CASTG	1 cut(s)	850
TseFI	GTSAC	1 cut(s)	959
TseI	GCWGC	2 cut(s)	1178, 1225
Tsp45I	GTSAC	1 cut(s)	959
TspDTI	ATGAA	8 cut(s)	88, 214, 242, 554, 582, 831, 878, 906
TspGWI	ACGGA	2 cut(s)	770, 1004
TspRI	CASTG	1 cut(s)	850
Vha464I	CTTAAG	1 cut(s)	458
VneI	GTGCAC	1 cut(s)	716
VpaK11BI	GGWCC	4 cut(s)	206, 278, 403, 418
XapI	RAATTY	2 cut(s)	980, 1099
XceI	RCATGY	3 cut(s)	791, 944, 1292
XhoI	CTCGAG	1 cut(s)	1110
XmnI	GAANNNNTTC	2 cut(s)	528, 1344
Zsp2I	ATGCAT	1 cut(s)	942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.