expansin-A23-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g17040 |
| rosa_chinensis | RchiOBHm_Chr7g0178811 |
| rosa_laevigata | RLG00000005414 |
| rosa_multiflora | Rmu_sc0015029.1_g000005 Rmu_sc0025325.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00274590 |
| rosa_rugosa | Rorug06G0419900 |
| rosa_samantha | Rh7AG019200 Rh7BG018500 Rh7CG019300 Rh7DG019100 |
| rosa_wichuraiana | Rw7G001560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 117, 358 |
| AciI | CCGC | 2 cut(s) | 208, 426 |
| AfaI | GTAC | 1 cut(s) | 272 |
| AgsI | TTSAA | 1 cut(s) | 151 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 235, 267 |
| AluBI | AGCT | 4 cut(s) | 59, 81, 95, 408 |
| AluI | AGCT | 4 cut(s) | 59, 81, 95, 408 |
| Alw26I | GTCTC | 1 cut(s) | 482 |
| Ama87I | CYCGRG | 1 cut(s) | 466 |
| AsuC2I | CCSGG | 2 cut(s) | 50, 182 |
| AvaI | CYCGRG | 1 cut(s) | 466 |
| BccI | CCATC | 1 cut(s) | 428 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 186, 220 |
| BciVI | GTATCC | 1 cut(s) | 327 |
| BcnI | CCSGG | 2 cut(s) | 50, 182 |
| BcoDI | GTCTC | 1 cut(s) | 482 |
| BfaI | CTAG | 2 cut(s) | 266, 511 |
| BfuAI | ACCTGC | 2 cut(s) | 117, 358 |
| BfuI | GTATCC | 1 cut(s) | 327 |
| BisI | GCNGC | 1 cut(s) | 208 |
| BlsI | GCNGC | 1 cut(s) | 209 |
| Bme1390I | CCNGG | 2 cut(s) | 50, 182 |
| BmeT110I | CYCGRG | 1 cut(s) | 466 |
| BmrFI | CCNGG | 2 cut(s) | 50, 182 |
| BpuMI | CCSGG | 2 cut(s) | 50, 182 |
| BsaJI | CCNNGG | 2 cut(s) | 98, 467 |
| Bse1I | ACTGG | 2 cut(s) | 331, 368 |
| Bse3DI | GCAATG | 1 cut(s) | 153 |
| BseDI | CCNNGG | 2 cut(s) | 98, 467 |
| BseGI | GGATG | 2 cut(s) | 382, 439 |
| BseMI | GCAATG | 1 cut(s) | 153 |
| BseNI | ACTGG | 2 cut(s) | 331, 368 |
| BsgI | GTGCAG | 3 cut(s) | 57, 407, 467 |
| BsiHKCI | CYCGRG | 1 cut(s) | 466 |
| BsiSI | CCGG | 2 cut(s) | 49, 182 |
| BslFI | GGGAC | 1 cut(s) | 164 |
| BsmAI | GTCTC | 1 cut(s) | 482 |
| BsmFI | GGGAC | 1 cut(s) | 164 |
| BsoBI | CYCGRG | 1 cut(s) | 466 |
| Bsp1407I | TGTACA | 1 cut(s) | 270 |
| Bsp143I | GATC | 1 cut(s) | 127 |
| BspACI | CCGC | 2 cut(s) | 208, 426 |
| BspMI | ACCTGC | 2 cut(s) | 117, 358 |
| BsrDI | GCAATG | 1 cut(s) | 153 |
| BsrGI | TGTACA | 1 cut(s) | 270 |
| BsrI | ACTGG | 2 cut(s) | 331, 368 |
| BssECI | CCNNGG | 2 cut(s) | 98, 467 |
| BssMI | GATC | 1 cut(s) | 127 |
| BssT1I | CCWWGG | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 1 cut(s) | 385 |
| Bst6I | CTCTTC | 1 cut(s) | 19 |
| BstAUI | TGTACA | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 1 cut(s) | 119 |
| BstF5I | GGATG | 2 cut(s) | 382, 439 |
| BstKTI | GATC | 1 cut(s) | 130 |
| BstMAI | GTCTC | 1 cut(s) | 482 |
| BstMBI | GATC | 1 cut(s) | 127 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 78, 118 |
| BstSCI | CCNGG | 2 cut(s) | 48, 180 |
| BsuI | GTATCC | 1 cut(s) | 327 |
| BtsCI | GGATG | 2 cut(s) | 382, 439 |
| BveI | ACCTGC | 2 cut(s) | 117, 358 |
| Cac8I | GCNNGC | 1 cut(s) | 119 |
| Csp6I | GTAC | 1 cut(s) | 271 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 199, 234, 262, 297 |
| CviAII | CATG | 1 cut(s) | 136 |
| CviJI | RGCY | 4 cut(s) | 59, 81, 95, 408 |
| CviKI_1 | RGCY | 4 cut(s) | 59, 81, 95, 408 |
| CviQI | GTAC | 1 cut(s) | 271 |
| DpnI | GATC | 1 cut(s) | 129 |
| DpnII | GATC | 1 cut(s) | 127 |
| Eam1104I | CTCTTC | 1 cut(s) | 19 |
| EarI | CTCTTC | 1 cut(s) | 19 |
| Eco130I | CCWWGG | 1 cut(s) | 98 |
| Eco88I | CYCGRG | 1 cut(s) | 466 |
| EcoT14I | CCWWGG | 1 cut(s) | 98 |
| ErhI | CCWWGG | 1 cut(s) | 98 |
| FaeI | CATG | 1 cut(s) | 139 |
| FaiI | YATR | 4 cut(s) | 137, 143, 493, 495 |
| FaqI | GGGAC | 1 cut(s) | 164 |
| FatI | CATG | 1 cut(s) | 135 |
| FauNDI | CATATG | 1 cut(s) | 493 |
| Fnu4HI | GCNGC | 1 cut(s) | 208 |
| FokI | GGATG | 2 cut(s) | 389, 446 |
| Fsp4HI | GCNGC | 1 cut(s) | 208 |
| FspBI | CTAG | 2 cut(s) | 266, 511 |
| GluI | GCNGC | 1 cut(s) | 208 |
| HapII | CCGG | 2 cut(s) | 49, 182 |
| Hin1II | CATG | 1 cut(s) | 139 |
| HpaII | CCGG | 2 cut(s) | 49, 182 |
| Hpy166II | GTNNAC | 3 cut(s) | 271, 320, 361 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 376, 454 |
| Hpy188III | TCNNGA | 1 cut(s) | 148 |
| Hpy8I | GTNNAC | 3 cut(s) | 271, 320, 361 |
| HpyCH4III | ACNGT | 1 cut(s) | 385 |
| HpyCH4IV | ACGT | 1 cut(s) | 346 |
| HpyCH4V | TGCA | 6 cut(s) | 27, 38, 105, 158, 388, 448 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 78, 118 |
| HpySE526I | ACGT | 1 cut(s) | 346 |
| Hsp92II | CATG | 1 cut(s) | 139 |
| Kzo9I | GATC | 1 cut(s) | 127 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| MaeI | CTAG | 2 cut(s) | 266, 511 |
| MaeII | ACGT | 1 cut(s) | 346 |
| MaeIII | GTNAC | 3 cut(s) | 52, 393, 421 |
| MalI | GATC | 1 cut(s) | 129 |
| MboI | GATC | 1 cut(s) | 127 |
| MboII | GAAGA | 3 cut(s) | 6, 319, 513 |
| MfeI | CAATTG | 1 cut(s) | 479 |
| MluCI | AATT | 3 cut(s) | 174, 349, 479 |
| MmeI | TCCRAC | 2 cut(s) | 311, 477 |
| MnlI | CCTC | 5 cut(s) | 82, 84, 123, 462, 490 |
| MseI | TTAA | 3 cut(s) | 9, 201, 237 |
| MslI | CAYNNNNRTG | 1 cut(s) | 140 |
| MspI | CCGG | 2 cut(s) | 49, 182 |
| MspR9I | CCNGG | 2 cut(s) | 50, 182 |
| MunI | CAATTG | 1 cut(s) | 479 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 78, 118 |
| NciI | CCSGG | 2 cut(s) | 50, 182 |
| NdeI | CATATG | 1 cut(s) | 493 |
| NdeII | GATC | 1 cut(s) | 127 |
| NlaIII | CATG | 1 cut(s) | 139 |
| NmeAIII | GCCGAG | 1 cut(s) | 221 |
| NmuCI | GTSAC | 1 cut(s) | 52 |
| PflFI | GACNNNGTC | 1 cut(s) | 458 |
| PkrI | GCNGC | 1 cut(s) | 209 |
| PsyI | GACNNNGTC | 1 cut(s) | 458 |
| RsaI | GTAC | 1 cut(s) | 272 |
| RsaNI | GTAC | 1 cut(s) | 271 |
| RseI | CAYNNNNRTG | 1 cut(s) | 140 |
| SaqAI | TTAA | 3 cut(s) | 9, 201, 237 |
| SatI | GCNGC | 1 cut(s) | 208 |
| Sau3AI | GATC | 1 cut(s) | 127 |
| ScrFI | CCNGG | 2 cut(s) | 50, 182 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 140 |
| Sse9I | AATT | 3 cut(s) | 174, 349, 479 |
| SsiI | CCGC | 2 cut(s) | 208, 426 |
| SspMI | CTAG | 2 cut(s) | 266, 511 |
| StyD4I | CCNGG | 2 cut(s) | 48, 180 |
| StyI | CCWWGG | 1 cut(s) | 98 |
| TaaI | ACNGT | 1 cut(s) | 385 |
| TaiI | ACGT | 1 cut(s) | 349 |
| TasI | AATT | 3 cut(s) | 174, 349, 479 |
| TatI | WGTACW | 1 cut(s) | 270 |
| TauI | GCSGC | 1 cut(s) | 210 |
| Tru1I | TTAA | 3 cut(s) | 9, 201, 237 |
| Tru9I | TTAA | 3 cut(s) | 9, 201, 237 |
| TseFI | GTSAC | 1 cut(s) | 52 |
| Tsp45I | GTSAC | 1 cut(s) | 52 |
| Tth111I | GACNNNGTC | 1 cut(s) | 458 |
| XspI | CTAG | 2 cut(s) | 266, 511 |