Rh7AG150000

GABA transporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
12147456 .. 12151239
3784 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG150000.1

Sequence Viewer

Length: 1155 bp
ATGGGAATCGTCACGTTCTACTCCTACTACCTCATGTCCAAGGTCCTCGACTACTGCGAGAAGGCCGGCCGCCGCCACATCAGATTCCGGGAGCTCGCCGCCGACGTGTTAGGGTCAGGATGGATGTTCTACTTTGTGATATTCATTCAGACAGCCATAAACACTGGGGTTGGAATTGGAGCAATTTTGCTTGCTGGGGAATGCATTAAGATTATGTATACAGAACTTTCTCCAAATGGATCCCTGAAATTGTACCACTTCATAGCCATGGTTACCGTGGTAATGATAGTCATCTCTCAACTACCATCTTTCCACTCCCTCAGACATATCAACCTTGGTTCGCTGCTTCTCAGCTTGGGCTACTCCTTCTTGGTGGTTGTTGCGTGTGTTTATGCAGGTACCTCTAAGAATGCCCCTCAAAGGGACTATTCCCTAGATTCTTCGGCATCAATAAGGGTCTTCAATGCCTTCACTTCCATCTCCATAATAGCTGCTATCTTTGGGAATGGCATACTACCTGAAATACAAGCAACATTGGCGCCACCAGCTACTGGAAAGATGGTGAAAGGTCTTGTAATGTGTTACACAGTAATTTTCATTACATTCTACGCCACTGCAGTGTCTGGTTACTGGGTGTTTGGGAATAAGTCTAGTTCAAACATTCTAGAGAGCCTAATGCCAGATGAAGGGCCTTCTTTGGCTCCAACATGGGTCCTTGGTCTTGCTGTGGTATTTGTTCTCCTTCAGCTTCTTGCCATTGGCCTGGTTTATTCTCAAGTTGCTTATGAGATCATGGAAAAGAATTCAGCTGATGTCAATCAGGGAATGTTTTCAAAAAGGAATCTGATTCCTCGGATAATTCTTCGGTCTGTGTACATGATACTGTGCGGATTTTTCGCAGCGATGCTCCCATTTTTCGGAGACATAAGCGGTGTGGTTGGAGCTGTTGGGTTTATCCCTTTAGATTTTGTCCTCCCAATGCTTCTCTACAACAAGACCCATAAGCCAACAAAATCGACCTTCACTTACTGGCTCAACATGTCTATAATGGTTGTGTTCACCGGAGTAGGATTGATGGGCACGTTTTCTTCCGTAAGGAAATTGGTTCTTGATGCCAAAGAGTTTAAGCTGTTTAGTGATGATGTGATTGACTAA

Protein Analysis

384

Amino Acids

42.25

Weight (kDa)

8.81

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 1 - 367 4.8e-50 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012377)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 386
Acc65I GGTACC 1 cut(s) 398
AccB1I GGYRCC 2 cut(s) 398, 538
AccB7I CCANNNNNTGG 1 cut(s) 551
AccI GTMKAC 1 cut(s) 218
AciI CCGC 5 cut(s) 70, 73, 99, 888, 930
AclWI GGATC 2 cut(s) 234, 247
AcoI YGGCCR 1 cut(s) 67
AcsI RAATTY 1 cut(s) 802
AcuI CTGAAG 1 cut(s) 728
AcyI GRCGYC 1 cut(s) 539
AfaI GTAC 3 cut(s) 254, 400, 875
AfiI CCNNNNNNNGG 5 cut(s) 420, 421, 551, 686, 917
AflIII ACRYGT 2 cut(s) 105, 1038
AgsI TTSAA 3 cut(s) 463, 657, 834
AjiI CACGTC 1 cut(s) 106
AjnI CCWGG 1 cut(s) 762
AleI CACNNNNGTG 1 cut(s) 617
AluBI AGCT 8 cut(s) 94, 354, 491, 548, 748, 809, 944, 1129
AluI AGCT 8 cut(s) 94, 354, 491, 548, 748, 809, 944, 1129
Alw21I GWGCWC 1 cut(s) 96
Alw26I GTCTC 1 cut(s) 915
AlwI GGATC 2 cut(s) 234, 247
AlwNI CAGNNNCTG 2 cut(s) 551, 623
AoxI GGCC 4 cut(s) 63, 67, 689, 760
ApeKI GCWGC 3 cut(s) 343, 491, 899
ApoI RAATTY 1 cut(s) 802
Asp700I GAANNNNTTC 1 cut(s) 829
Asp718I GGTACC 1 cut(s) 398
AspLEI GCGC 1 cut(s) 541
AspS9I GGNCC 3 cut(s) 43, 689, 712
AsuC2I CCSGG 1 cut(s) 89
AsuHPI GGTGA 2 cut(s) 574, 1051
AvaII GGWCC 2 cut(s) 43, 712
BaeGI GKGCMC 1 cut(s) 1082
BamHI GGATCC 1 cut(s) 239
BanI GGYRCC 2 cut(s) 398, 538
BanII GRGCYC 1 cut(s) 96
BbsI GAAGAC 1 cut(s) 451
Bbv12I GWGCWC 1 cut(s) 96
BbvI GCAGC 3 cut(s) 330, 478, 911
BccI CCATC 5 cut(s) 114, 313, 485, 553, 1069
BciT130I CCWGG 1 cut(s) 764
BcnI CCSGG 1 cut(s) 89
BcoDI GTCTC 1 cut(s) 915
BfaI CTAG 3 cut(s) 434, 651, 665
BfmI CTRYAG 1 cut(s) 615
BfoI RGCGCY 1 cut(s) 542
BfuAI ACCTGC 1 cut(s) 386
BisI GCNGC 6 cut(s) 70, 73, 99, 344, 492, 900
BlsI GCNGC 6 cut(s) 71, 74, 100, 345, 493, 901
Bme1390I CCNGG 2 cut(s) 89, 764
Bme18I GGWCC 2 cut(s) 43, 712
BmgBI CACGTC 1 cut(s) 106
BmgT120I GGNCC 3 cut(s) 43, 689, 712
BmiI GGNNCC 5 cut(s) 241, 400, 540, 702, 713
BmrFI CCNGG 2 cut(s) 89, 764
BmrI ACTGGG 2 cut(s) 174, 640
BmsI GCATC 3 cut(s) 455, 894, 1102
BmuI ACTGGG 2 cut(s) 174, 640
BpiI GAAGAC 1 cut(s) 451
BpuEI CTTGAG 1 cut(s) 759
BpuMI CCSGG 1 cut(s) 89
BsaBI GATNNNNATC 2 cut(s) 290, 816
BsaHI GRCGYC 1 cut(s) 539
BsaJI CCNNGG 6 cut(s) 39, 267, 276, 334, 715, 851
BsaWI WCCGGW 1 cut(s) 1061
Bsc4I CCNNNNNNNGG 5 cut(s) 420, 421, 551, 686, 917
Bse118I RCCGGY 1 cut(s) 65
Bse1I ACTGG 4 cut(s) 169, 556, 635, 1034
Bse8I GATNNNNATC 2 cut(s) 290, 816
BseBI CCWGG 1 cut(s) 764
BseDI CCNNGG 6 cut(s) 39, 267, 276, 334, 715, 851
BseGI GGATG 2 cut(s) 125, 129
BseJI GATNNNNATC 2 cut(s) 290, 816
BseLI CCNNNNNNNGG 5 cut(s) 420, 421, 551, 686, 917
BseMII CTCAG 2 cut(s) 334, 364
BseNI ACTGG 4 cut(s) 169, 556, 635, 1034
BseSI GKGCMC 1 cut(s) 1082
BseX3I CGGCCG 1 cut(s) 67
BseXI GCAGC 3 cut(s) 330, 478, 911
BseYI CCCAGC 1 cut(s) 194
Bsh1285I CGRYCG 1 cut(s) 70
BshFI GGCC 4 cut(s) 65, 69, 691, 762
BshNI GGYRCC 2 cut(s) 398, 538
BsiEI CGRYCG 1 cut(s) 70
BsiHKAI GWGCWC 1 cut(s) 96
BsiSI CCGG 3 cut(s) 66, 88, 1062
BslFI GGGAC 1 cut(s) 437
BslI CCNNNNNNNGG 5 cut(s) 420, 421, 551, 686, 917
BsmAI GTCTC 1 cut(s) 915
BsmFI GGGAC 1 cut(s) 437
BsmI GAATGC 2 cut(s) 206, 415
BsnI GGCC 4 cut(s) 65, 69, 691, 762
Bsp1286I GDGCHC 2 cut(s) 96, 1082
Bsp1407I TGTACA 1 cut(s) 873
Bsp143I GATC 2 cut(s) 239, 789
Bsp19I CCATGG 1 cut(s) 267
BspACI CCGC 5 cut(s) 70, 73, 99, 888, 930
BspANI GGCC 4 cut(s) 65, 69, 691, 762
BspCNI CTCAG 2 cut(s) 333, 363
BspLI GGNNCC 5 cut(s) 241, 400, 540, 702, 713
BspMAI CTGCAG 1 cut(s) 619
BspMI ACCTGC 1 cut(s) 386
BspPI GGATC 2 cut(s) 234, 247
BspT107I GGYRCC 2 cut(s) 398, 538
BsrFI RCCGGY 1 cut(s) 65
BsrGI TGTACA 1 cut(s) 873
BsrI ACTGG 4 cut(s) 169, 556, 635, 1034
BssAI RCCGGY 1 cut(s) 65
BssECI CCNNGG 6 cut(s) 39, 267, 276, 334, 715, 851
BssMI GATC 2 cut(s) 239, 789
BssNAI GTATAC 1 cut(s) 219
BssNI GRCGYC 1 cut(s) 539
BssT1I CCWWGG 4 cut(s) 39, 267, 334, 715
Bst1107I GTATAC 1 cut(s) 219
Bst2UI CCWGG 1 cut(s) 764
Bst4CI ACNGT 3 cut(s) 277, 589, 885
BstACI GRCGYC 1 cut(s) 539
BstAUI TGTACA 1 cut(s) 873
BstC8I GCNNGC 3 cut(s) 67, 96, 192
BstDEI CTNAG 3 cut(s) 320, 350, 405
BstDSI CCRYGG 2 cut(s) 267, 276
BstEII GGTNACC 1 cut(s) 271
BstF5I GGATG 2 cut(s) 125, 129
BstH2I RGCGCY 1 cut(s) 542
BstHHI GCGC 1 cut(s) 541
BstKTI GATC 2 cut(s) 242, 792
BstMAI GTCTC 1 cut(s) 915
BstMBI GATC 2 cut(s) 239, 789
BstMCI CGRYCG 1 cut(s) 70
BstMWI GCNNNNNNNGC 2 cut(s) 536, 545
BstNI CCWGG 1 cut(s) 764
BstNSI RCATGY 1 cut(s) 1042
BstPI GGTNACC 1 cut(s) 271
BstSCI CCNGG 2 cut(s) 87, 762
BstSFI CTRYAG 1 cut(s) 615
BstSLI GKGCMC 1 cut(s) 1082
BstV1I GCAGC 3 cut(s) 330, 478, 911
BstV2I GAAGAC 1 cut(s) 451
BstX2I RGATCY 1 cut(s) 239
BstXI CCANNNNNNTGG 1 cut(s) 763
BstYI RGATCY 1 cut(s) 239
BstZ17I GTATAC 1 cut(s) 219
BstZI CGGCCG 1 cut(s) 67
BsuRI GGCC 4 cut(s) 65, 69, 691, 762
BtgI CCRYGG 2 cut(s) 267, 276
BtgZI GCGATG 1 cut(s) 917
BtrI CACGTC 1 cut(s) 106
BtsCI GGATG 2 cut(s) 125, 129
BtsI GCAGTG 2 cut(s) 612, 624
BtsIMutI CAGTG 3 cut(s) 162, 612, 624
BveI ACCTGC 1 cut(s) 386
Cac8I GCNNGC 3 cut(s) 67, 96, 192
CaiI CAGNNNCTG 2 cut(s) 551, 623
CfoI GCGC 1 cut(s) 541
Cfr10I RCCGGY 1 cut(s) 65
Cfr13I GGNCC 3 cut(s) 43, 689, 712
Csp6I GTAC 3 cut(s) 253, 399, 874
CviAII CATG 6 cut(s) 34, 268, 708, 793, 877, 1039
CviQI GTAC 3 cut(s) 253, 399, 874
DdeI CTNAG 3 cut(s) 320, 350, 405
DinI GGCGCC 1 cut(s) 540
DpnI GATC 2 cut(s) 241, 791
DpnII GATC 2 cut(s) 239, 789
EaeI YGGCCR 1 cut(s) 67
EagI CGGCCG 1 cut(s) 67
Ecl136II GAGCTC 1 cut(s) 94
EclXI CGGCCG 1 cut(s) 67
Eco130I CCWWGG 4 cut(s) 39, 267, 334, 715
Eco24I GRGCYC 1 cut(s) 96
Eco47I GGWCC 2 cut(s) 43, 712
Eco52I CGGCCG 1 cut(s) 67
Eco53kI GAGCTC 1 cut(s) 94
Eco57I CTGAAG 1 cut(s) 728
Eco91I GGTNACC 1 cut(s) 271
EcoICRI GAGCTC 1 cut(s) 94
EcoO109I RGGNCCY 3 cut(s) 43, 689, 712
EcoO65I GGTNACC 1 cut(s) 271
EcoRI GAATTC 1 cut(s) 802
EcoRII CCWGG 1 cut(s) 762
EcoT14I CCWWGG 4 cut(s) 39, 267, 334, 715
EcoT22I ATGCAT 1 cut(s) 206
EcoT38I GRGCYC 1 cut(s) 96
EgeI GGCGCC 1 cut(s) 540
EheI GGCGCC 1 cut(s) 540
ErhI CCWWGG 4 cut(s) 39, 267, 334, 715
FaeI CATG 6 cut(s) 37, 271, 711, 796, 880, 1042
FaqI GGGAC 1 cut(s) 437
FatI CATG 6 cut(s) 33, 267, 707, 792, 876, 1038
FblI GTMKAC 1 cut(s) 218
Fnu4HI GCNGC 6 cut(s) 70, 73, 99, 344, 492, 900
FokI GGATG 2 cut(s) 132, 136
FriOI GRGCYC 1 cut(s) 96
FseI GGCCGGCC 1 cut(s) 69
Fsp4HI GCNGC 6 cut(s) 70, 73, 99, 344, 492, 900
FspBI CTAG 3 cut(s) 434, 651, 665
GlaI GCGC 1 cut(s) 540
GluI GCNGC 6 cut(s) 70, 73, 99, 344, 492, 900
GsaI CCCAGC 1 cut(s) 198
HaeII RGCGCY 1 cut(s) 542
HaeIII GGCC 4 cut(s) 65, 69, 691, 762
HapII CCGG 3 cut(s) 66, 88, 1062
HhaI GCGC 1 cut(s) 541
Hin1I GRCGYC 1 cut(s) 539
Hin1II CATG 6 cut(s) 37, 271, 711, 796, 880, 1042
Hin6I GCGC 1 cut(s) 539
HinP1I GCGC 1 cut(s) 539
HinfI GANTC 5 cut(s) 6, 84, 437, 841, 847
HpaII CCGG 3 cut(s) 66, 88, 1062
HphI GGTGA 2 cut(s) 574, 1051
Hpy166II GTNNAC 3 cut(s) 219, 874, 1059
Hpy188I TCNGA 6 cut(s) 83, 150, 323, 846, 855, 920
Hpy188III TCNNGA 3 cut(s) 117, 665, 1109
Hpy8I GTNNAC 3 cut(s) 219, 874, 1059
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 7 cut(s) 55, 376, 478, 680, 702, 752, 1030
HpyCH4III ACNGT 3 cut(s) 277, 589, 885
HpyCH4IV ACGT 3 cut(s) 14, 105, 1082
HpyCH4V TGCA 3 cut(s) 204, 395, 617
HpyF10VI GCNNNNNNNGC 2 cut(s) 536, 545
HpyF3I CTNAG 3 cut(s) 320, 350, 405
HpySE526I ACGT 3 cut(s) 14, 105, 1082
Hsp92I GRCGYC 1 cut(s) 539
Hsp92II CATG 6 cut(s) 37, 271, 711, 796, 880, 1042
HspAI GCGC 1 cut(s) 539
KasI GGCGCC 1 cut(s) 538
KpnI GGTACC 1 cut(s) 402
KroI GCCGGC 1 cut(s) 65
KroNI GCCGGC 1 cut(s) 67
Kzo9I GATC 2 cut(s) 239, 789
LmnI GCTCC 5 cut(s) 91, 179, 706, 912, 941
Lsp1109I GCAGC 3 cut(s) 330, 478, 911
LweI GCATC 3 cut(s) 455, 894, 1102
MaeI CTAG 3 cut(s) 434, 651, 665
MaeII ACGT 3 cut(s) 14, 105, 1082
MaeIII GTNAC 4 cut(s) 10, 271, 581, 626
MalI GATC 2 cut(s) 241, 791
MboI GATC 2 cut(s) 239, 789
MboII GAAGA 4 cut(s) 432, 451, 854, 1080
MflI RGATCY 1 cut(s) 239
MhlI GDGCHC 2 cut(s) 96, 1082
MluCI AATT 7 cut(s) 174, 183, 248, 591, 802, 858, 1100
Mly113I GGCGCC 1 cut(s) 539
MmeI TCCRAC 3 cut(s) 151, 728, 919
MnlI CCTC 7 cut(s) 41, 56, 329, 412, 426, 861, 983
Mph1103I ATGCAT 1 cut(s) 206
MroNI GCCGGC 1 cut(s) 65
MroXI GAANNNNTTC 1 cut(s) 829
MseI TTAA 2 cut(s) 207, 1125
MslI CAYNNNNRTG 2 cut(s) 266, 617
MspA1I CMGCKG 1 cut(s) 809
MspI CCGG 3 cut(s) 66, 88, 1062
MspR9I CCNGG 2 cut(s) 89, 764
Mva1269I GAATGC 2 cut(s) 206, 415
MvaI CCWGG 1 cut(s) 764
MwoI GCNNNNNNNGC 2 cut(s) 536, 545
NaeI GCCGGC 1 cut(s) 67
NarI GGCGCC 1 cut(s) 539
NciI CCSGG 1 cut(s) 89
NcoI CCATGG 1 cut(s) 267
NdeII GATC 2 cut(s) 239, 789
NgoMIV GCCGGC 1 cut(s) 65
NlaIII CATG 6 cut(s) 37, 271, 711, 796, 880, 1042
NlaIV GGNNCC 5 cut(s) 241, 400, 540, 702, 713
NmuCI GTSAC 1 cut(s) 10
NsiI ATGCAT 1 cut(s) 206
NspI RCATGY 1 cut(s) 1042
OliI CACNNNNGTG 1 cut(s) 617
PciI ACATGT 1 cut(s) 1038
PcsI WCGNNNNNNNCGW 2 cut(s) 54, 102
PctI GAATGC 2 cut(s) 206, 415
PdiI GCCGGC 1 cut(s) 67
PdmI GAANNNNTTC 1 cut(s) 829
PfeI GAWTC 5 cut(s) 6, 84, 437, 841, 847
PflMI CCANNNNNTGG 1 cut(s) 551
PfoI TCCNGGA 1 cut(s) 87
PkrI GCNGC 6 cut(s) 71, 74, 100, 345, 493, 901
PluTI GGCGCC 1 cut(s) 542
PpuMI RGGWCCY 2 cut(s) 43, 712
PscI ACATGT 1 cut(s) 1038
Psp124BI GAGCTC 1 cut(s) 96
Psp5II RGGWCCY 2 cut(s) 43, 712
Psp6I CCWGG 1 cut(s) 762
PspEI GGTNACC 1 cut(s) 271
PspFI CCCAGC 1 cut(s) 194
PspGI CCWGG 1 cut(s) 762
PspN4I GGNNCC 5 cut(s) 241, 400, 540, 702, 713
PspPI GGNCC 3 cut(s) 43, 689, 712
PspPPI RGGWCCY 2 cut(s) 43, 712
PstI CTGCAG 1 cut(s) 619
PstNI CAGNNNCTG 2 cut(s) 551, 623
PsuI RGATCY 1 cut(s) 239
PvuII CAGCTG 1 cut(s) 809
RigI GGCCGGCC 1 cut(s) 69
RsaI GTAC 3 cut(s) 254, 400, 875
RsaNI GTAC 3 cut(s) 253, 399, 874
RseI CAYNNNNRTG 2 cut(s) 266, 617
SacI GAGCTC 1 cut(s) 96
SaqAI TTAA 2 cut(s) 207, 1125
SatI GCNGC 6 cut(s) 70, 73, 99, 344, 492, 900
Sau3AI GATC 2 cut(s) 239, 789
Sau96I GGNCC 3 cut(s) 43, 689, 712
ScrFI CCNGG 2 cut(s) 89, 764
SduI GDGCHC 2 cut(s) 96, 1082
SfaNI GCATC 3 cut(s) 455, 894, 1102
SfcI CTRYAG 1 cut(s) 615
SfoI GGCGCC 1 cut(s) 540
SinI GGWCC 2 cut(s) 43, 712
SmiMI CAYNNNNRTG 2 cut(s) 266, 617
SmlI CTYRAG 1 cut(s) 774
SmoI CTYRAG 1 cut(s) 774
Sse9I AATT 7 cut(s) 174, 183, 248, 591, 802, 858, 1100
SsiI CCGC 5 cut(s) 70, 73, 99, 888, 930
SspDI GGCGCC 1 cut(s) 538
SspMI CTAG 3 cut(s) 434, 651, 665
SstI GAGCTC 1 cut(s) 96
StyD4I CCNGG 2 cut(s) 87, 762
StyI CCWWGG 4 cut(s) 39, 267, 334, 715
TaaI ACNGT 3 cut(s) 277, 589, 885
TaiI ACGT 3 cut(s) 17, 108, 1085
TaqI TCGA 2 cut(s) 48, 1016
TaqII GACCGA 1 cut(s) 855
TasI AATT 7 cut(s) 174, 183, 248, 591, 802, 858, 1100
TatI WGTACW 1 cut(s) 873
TauI GCSGC 3 cut(s) 72, 75, 101
TfiI GAWTC 5 cut(s) 6, 84, 437, 841, 847
Tru1I TTAA 2 cut(s) 207, 1125
Tru9I TTAA 2 cut(s) 207, 1125
TscAI CASTG 3 cut(s) 169, 619, 624
TseFI GTSAC 1 cut(s) 10
TseI GCWGC 3 cut(s) 343, 491, 899
Tsp45I GTSAC 1 cut(s) 10
TspDTI ATGAA 4 cut(s) 133, 250, 586, 699
TspGWI ACGGA 1 cut(s) 1081
TspRI CASTG 3 cut(s) 169, 619, 624
Van91I CCANNNNNTGG 1 cut(s) 551
VpaK11BI GGWCC 2 cut(s) 43, 712
XapI RAATTY 1 cut(s) 802
XbaI TCTAGA 1 cut(s) 664
XceI RCATGY 1 cut(s) 1042
XcmI CCANNNNNNNNNTGG 1 cut(s) 274
XmiI GTMKAC 1 cut(s) 218
XmnI GAANNNNTTC 1 cut(s) 829
XspI CTAG 3 cut(s) 434, 651, 665
Zsp2I ATGCAT 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.