Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0005566

Physical Location & Seq

Genomic Coordinates Forward (+)

38607508 .. 38613576

Gene Structure 6069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG334200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGGATGCATTTGCTCGAAAGGGCTATTAGCCAATCAATATGTTTTGAAGAATCATCGTAGGGACAAAGAATTAAAGTCAAATAAGTTGTCAAAGGAATTAGATGGAGGAGCCGTCGGGGTAGATGCTGGTGGAAATGATGCAACTACACGGCTGATAACCAATCATCGCACCGACGACAATGCAGGGTCGACTCCCATTTCATCAGATGAAGGGGAGAAGAAGATCGGGGTTGGGGTTACCAAAGCAGGGTCAAGTGCTCCGAGATTCCCATCTGGGCTAAATAGGATAACTAGCATAACACATGGAGAAAGAGGAGCACAAGTTGTTGCTGGATGGCCTTCTTGGCTCACTGCAGTGGCAGGAGAAGCAATCAGTGGGTGGGTGCCTCGCAAGGCAGATTCATTTGAAAGACTGGACAAGATTGGACAAGGAACTTACAGCAGCGTGTACAGAGCCCGTGATCTTGAATCAAACAAAATAGTTGCATTAAAGAAGGTGCGATTTGCCAATATGGATCCAGAAAGTGTACGTTTTATGTCGAGAGAAATTCTTATTTTGCGCAGGCTTGATCACCCCAATATCATGAAGCTTGAAGGTCTGATTACATCAAGGGTTTCGGGCAGCTTATACCTTGTATTTGAATATATGGAGCATGATCTTGCAGGGATTGCATCAAGACCTGGGATCAAGTTCACTGAAGCACAGATCAAATGTTACATGCAACAGCTTCTTCATGGACTTGAACATTGTCACAGTCATGGTATTTTGCACCGTGACATCAAGGGATCAAATCTTTTGATCGACAATTATGGCAACCTAAAGATCGCTGACTTTGGTCTAGCAACCTTTTACCAACCTCGTCAAAAGCAGCCTCTGACTAGTCGTGTAGTAACCCTGTGGTACCGACCACCTGAACTTTTGCTTGGCTCTACAGACTATGGGGTTTCTGTGGATTTGTGGAGTTCTGGTTGCATTCTTGCAGAATTGTTTCATGGGAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACATAAGATATTTAAGCTCTGCGGGTCACCTTCTGAGGAATACTGGAAGAGATCAAAATTGCCACATGCAACGATTTTTAAACCAACACAACCATACAAGCGTTGTGTTGCAGAGACCTTCAAAGATTTTCCGCGCTCAGCAATGGCCCTATTGGAGGTTCTTCTGGCAGTAGAACCTGACCGTCGTGGAACAGCTTCTTCTGCACTTCAGAGTGAGTTCTTCACATCTATGCCGCTTCCCTGTGATCCTTCAACTTTGCCCAAGTACCCACCGAGCAAAGAGTTCGATGCCAAGCTCCGAGATGAGGAAGCTAGAAGGCGAAGAGCATCTGGTGGTAAAGGACATGGAGGGAGTTCCAAAGAATCAAAGGCTGTGCCAGCACCAGTTGGCACTGCTGGGCAGGAATCAACAGAGAACCAACAAGGGCAACATAAGCCAAAAGGCATCAGCGAGAAGTACATTCCTGAAGAGGATGGTGGCTCTGGCTTTCCTCTTGAACCTCCCAAAGGAGCCACATCAAATGGCTTCTCCCATTCAGGCCATTCAATGCACCCAAGTGCATATGGATCTACACGGAATATGGAAATGCGAGGCCAGTCTAAGAATGGTGCAGAGTTGAGAAGGCAGAACTCATATATGAATGGTGGAGCAGCCCAATCTTCCAGATTTTCCAGTTCAGCTTCAGTTCGAAGTGATTCGCGATTTGGTGGTGCTGTAGAAACTACTGCAAATCCACACTGGCCAGAGGAGCGTATTAACACCAGATATAATCATTTAGATGACGGGAATTCCTCTGCAAAACACGATTGGTCCCTTCAATTTCTGAATAGGCCAAAGTCTTCACAGAGAAAGGATGAACACCCATCTGGAAAGGATTCAGCAAGGGGTTATGCTACCAAGAAGAACCGGATCCACTACTCTGGACCGCTGATGCCCCCTGGGGGAAACCTTGAGGAGATGCTCAAAGAGCATGAAAAACAAATACAACATGCTGTCCGCAAAGCTAGACTGGACAAAGCCAACACCAAGAAAGCCTATGGTGAAAATGGACAAACCGAGTCCCTACTTCACAATGTGAGAAATGGCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

709

Amino Acids

78.3

Weight (kDa)

9.46

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	136 - 420	1.4e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	139 - 349	3.5e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G57700
fragaria_vesca	FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28310
malus_domestica	MD08G1244800.v1.1 MD15G1439900.v1.1
prunus_persica	Prupe.1G582200_v2.0.a1 Prupe.1G582200_v2.0.a1 Prupe.1G582200_v2.0.a1 Prupe.1G582200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0220331
rosa_laevigata	RLG00000002229
rosa_multiflora	Rmu_sc0001136.1_g000085
rosa_roxburghii	Rroxscaffold_3G00239520
rosa_rugosa	Rorug07G0192900
rosa_samantha	Rh7AG334200 Rh7BG325100 Rh7CG351900 Rh7DG330900
rosa_wichuraiana	Rw7G028280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2115
Acc16I	TGCGCA	1 cut(s)	563
Acc36I	ACCTGC	1 cut(s)	2115
Acc65I	GGTACC	1 cut(s)	903
AccB1I	GGYRCC	2 cut(s)	385, 903
AccI	GTMKAC	1 cut(s)	191
AccII	CGCG	2 cut(s)	1171, 1738
AciI	CCGC	5 cut(s)	1059, 1169, 1271, 1964, 2035
AclWI	GGATC	8 cut(s)	512, 525, 695, 796, 1277, 1612, 1942, 1955
AcoI	YGGCCR	1 cut(s)	1778
AcsI	RAATTY	2 cut(s)	549, 1825
AcuI	CTGAAG	4 cut(s)	720, 1229, 1524, 1704
AdeI	CACNNNGTG	1 cut(s)	2113
AfaI	GTAC	5 cut(s)	452, 531, 905, 1304, 1496
AfiI	CCNNNNNNNGG	5 cut(s)	249, 1192, 1342, 1544, 1979
AhlI	ACTAGT	1 cut(s)	881
AjnI	CCWGG	3 cut(s)	682, 1012, 1975
AjuI	GAANNNNNNNTTGG	2 cut(s)	909, 941
AleI	CACNNNNGTG	2 cut(s)	356, 1593
AluBI	AGCT	9 cut(s)	592, 627, 730, 1054, 1232, 1333, 1349, 1718, 2042
AluI	AGCT	9 cut(s)	592, 627, 730, 1054, 1232, 1333, 1349, 1718, 2042
Alw21I	GWGCWC	2 cut(s)	262, 322
Alw26I	GTCTC	1 cut(s)	1145
AlwI	GGATC	8 cut(s)	512, 525, 695, 796, 1277, 1612, 1942, 1955
AlwNI	CAGNNNCTG	1 cut(s)	877
AoxI	GGCC	6 cut(s)	338, 1182, 1576, 1630, 1778, 1868
ApeKI	GCWGC	4 cut(s)	444, 624, 871, 1688
ApoI	RAATTY	2 cut(s)	549, 1825
ArsI	GACNNNNNNTTYG	2 cut(s)	74, 106
Asp700I	GAANNNNTTC	4 cut(s)	990, 1231, 1732, 1912
Asp718I	GGTACC	1 cut(s)	903
AspLEI	GCGC	2 cut(s)	564, 1173
AspS9I	GGNCC	3 cut(s)	1183, 1848, 1961
AsuHPI	GGTGA	3 cut(s)	566, 1056, 2090
AsuII	TTCGAA	1 cut(s)	1726
AvaII	GGWCC	2 cut(s)	1848, 1961
BalI	TGGCCA	1 cut(s)	1780
BamHI	GGATCC	2 cut(s)	517, 1947
BanI	GGYRCC	2 cut(s)	385, 903
BanII	GRGCYC	1 cut(s)	460
BbsI	GAAGAC	1 cut(s)	1869
Bbv12I	GWGCWC	2 cut(s)	262, 322
BbvI	GCAGC	4 cut(s)	456, 636, 883, 1700
BccI	CCATC	5 cut(s)	98, 280, 330, 1505, 1909
BceAI	ACGGC	2 cut(s)	98, 167
BcgI	CGANNNNNNTGC	4 cut(s)	164, 198, 1303, 1337
BciT130I	CCWGG	3 cut(s)	684, 1014, 1977
BclI	TGATCA	1 cut(s)	571
BcoDI	GTCTC	1 cut(s)	1145
BcuI	ACTAGT	1 cut(s)	881
BfaI	CTAG	5 cut(s)	294, 842, 882, 1350, 2043
BfmI	CTRYAG	3 cut(s)	354, 933, 1752
BfuAI	ACCTGC	1 cut(s)	2115
BglI	GCCNNNNNGGC	1 cut(s)	346
BisI	GCNGC	5 cut(s)	445, 625, 872, 1271, 1689
BlpI	GCTNAGC	1 cut(s)	1174
BlsI	GCNGC	5 cut(s)	446, 626, 873, 1272, 1690
Bme1390I	CCNGG	3 cut(s)	684, 1014, 1977
Bme18I	GGWCC	2 cut(s)	1848, 1961
BmgT120I	GGNCC	3 cut(s)	1183, 1848, 1961
BmiI	GGNNCC	7 cut(s)	112, 387, 519, 905, 1549, 1850, 1949
BmrFI	CCNGG	3 cut(s)	684, 1014, 1977
BmsI	GCATC	8 cut(s)	115, 130, 683, 1315, 1373, 1491, 1959, 1986
BoxI	GACNNNNGTC	1 cut(s)	837
BpiI	GAAGAC	1 cut(s)	1869
Bpu1102I	GCTNAGC	1 cut(s)	1174
Bpu14I	TTCGAA	1 cut(s)	1726
BpuEI	CTTGAG	1 cut(s)	2009
BsaBI	GATNNNNATC	1 cut(s)	271
BsaI	GGTCTC	1 cut(s)	1145
BsaJI	CCNNGG	3 cut(s)	683, 1975, 1976
BsaWI	WCCGGW	1 cut(s)	1944
BsaXI	ACNNNNNCTCC	6 cut(s)	99, 129, 309, 339, 955, 985
Bsc4I	CCNNNNNNNGG	5 cut(s)	249, 1192, 1342, 1544, 1979
Bse1I	ACTGG	7 cut(s)	420, 1085, 1421, 1633, 1710, 1781, 2052
Bse3DI	GCAATG	1 cut(s)	1185
Bse8I	GATNNNNATC	1 cut(s)	271
BseBI	CCWGG	3 cut(s)	684, 1014, 1977
BseDI	CCNNGG	3 cut(s)	683, 1975, 1976
BseGI	GGATG	4 cut(s)	11, 341, 1516, 1897
BseJI	GATNNNNATC	1 cut(s)	271
BseLI	CCNNNNNNNGG	5 cut(s)	249, 1192, 1342, 1544, 1979
BseMI	GCAATG	1 cut(s)	1185
BseMII	CTCAG	2 cut(s)	1062, 1188
BseNI	ACTGG	7 cut(s)	420, 1085, 1421, 1633, 1710, 1781, 2052
BseRI	GAGGAG	4 cut(s)	123, 330, 1799, 2006
BseXI	GCAGC	4 cut(s)	456, 636, 883, 1700
BseYI	CCCAGC	1 cut(s)	1433
BsgI	GTGCAG	2 cut(s)	1224, 1668
Bsh1236I	CGCG	2 cut(s)	1171, 1738
BshFI	GGCC	6 cut(s)	340, 1184, 1578, 1632, 1780, 1870
BshNI	GGYRCC	2 cut(s)	385, 903
BsiHKAI	GWGCWC	2 cut(s)	262, 322
BsiSI	CCGG	1 cut(s)	1945
BslFI	GGGAC	3 cut(s)	77, 1834, 2083
BslI	CCNNNNNNNGG	5 cut(s)	249, 1192, 1342, 1544, 1979
BsmAI	GTCTC	1 cut(s)	1145
BsmFI	GGGAC	3 cut(s)	77, 1834, 2083
BsmI	GAATGC	1 cut(s)	975
BsnI	GGCC	6 cut(s)	340, 1184, 1578, 1632, 1780, 1870
Bso31I	GGTCTC	1 cut(s)	1145
Bsp119I	TTCGAA	1 cut(s)	1726
Bsp1286I	GDGCHC	3 cut(s)	262, 322, 460
Bsp1407I	TGTACA	1 cut(s)	450
Bsp1720I	GCTNAGC	1 cut(s)	1174
Bsp68I	TCGCGA	1 cut(s)	1738
BspACI	CCGC	5 cut(s)	1059, 1169, 1271, 1964, 2035
BspANI	GGCC	6 cut(s)	340, 1184, 1578, 1632, 1780, 1870
BspCNI	CTCAG	2 cut(s)	1063, 1187
BspFNI	CGCG	2 cut(s)	1171, 1738
BspHI	TCATGA	1 cut(s)	585
BspLI	GGNNCC	7 cut(s)	112, 387, 519, 905, 1549, 1850, 1949
BspMAI	CTGCAG	1 cut(s)	358
BspMI	ACCTGC	1 cut(s)	2115
BspPI	GGATC	8 cut(s)	512, 525, 695, 796, 1277, 1612, 1942, 1955
BspQI	GCTCTTC	1 cut(s)	1354
BspT104I	TTCGAA	1 cut(s)	1726
BspT107I	GGYRCC	2 cut(s)	385, 903
BspTNI	GGTCTC	1 cut(s)	1145
BsrDI	GCAATG	1 cut(s)	1185
BsrGI	TGTACA	1 cut(s)	450
BsrI	ACTGG	7 cut(s)	420, 1085, 1421, 1633, 1710, 1781, 2052
BssECI	CCNNGG	3 cut(s)	683, 1975, 1976
Bst2UI	CCWGG	3 cut(s)	684, 1014, 1977
Bst4CI	ACNGT	3 cut(s)	758, 776, 1220
Bst6I	CTCTTC	3 cut(s)	1079, 1354, 1500
BstAPI	GCANNNNNTGC	1 cut(s)	671
BstAUI	TGTACA	1 cut(s)	450
BstBI	TTCGAA	1 cut(s)	1726
BstC8I	GCNNGC	2 cut(s)	566, 1416
BstDEI	CTNAG	3 cut(s)	1071, 1174, 1638
BstEII	GGTNACC	2 cut(s)	238, 1062
BstENI	CCTNNNNNAGG	2 cut(s)	1190, 1542
BstF5I	GGATG	4 cut(s)	11, 341, 1516, 1897
BstFNI	CGCG	2 cut(s)	1171, 1738
BstHHI	GCGC	2 cut(s)	564, 1173
BstMAI	GTCTC	1 cut(s)	1145
BstMWI	GCNNNNNNNGC	9 cut(s)	346, 368, 671, 1009, 1238, 1415, 1471, 1786, 2005
BstNI	CCWGG	3 cut(s)	684, 1014, 1977
BstNSI	RCATGY	3 cut(s)	724, 1106, 2030
BstPAI	GACNNNNGTC	1 cut(s)	837
BstPI	GGTNACC	2 cut(s)	238, 1062
BstSCI	CCNGG	3 cut(s)	682, 1012, 1975
BstSFI	CTRYAG	3 cut(s)	354, 933, 1752
BstUI	CGCG	2 cut(s)	1171, 1738
BstV1I	GCAGC	4 cut(s)	456, 636, 883, 1700
BstV2I	GAAGAC	1 cut(s)	1869
BstX2I	RGATCY	3 cut(s)	517, 1604, 1947
BstXI	CCANNNNNNTGG	1 cut(s)	1958
BstYI	RGATCY	3 cut(s)	517, 1604, 1947
BsuRI	GGCC	6 cut(s)	340, 1184, 1578, 1632, 1780, 1870
BtgZI	GCGATG	1 cut(s)	152
BtsCI	GGATG	4 cut(s)	11, 341, 1516, 1897
BtsI	GCAGTG	3 cut(s)	351, 363, 1428
BtsIMutI	CAGTG	6 cut(s)	351, 363, 382, 696, 1428, 1774
BtuMI	TCGCGA	1 cut(s)	1738
BveI	ACCTGC	1 cut(s)	2115
Cac8I	GCNNGC	2 cut(s)	566, 1416
CaiI	CAGNNNCTG	1 cut(s)	877
CciI	TCATGA	1 cut(s)	585
CfoI	GCGC	2 cut(s)	564, 1173
Cfr13I	GGNCC	3 cut(s)	1183, 1848, 1961
Csp6I	GTAC	5 cut(s)	451, 530, 904, 1303, 1495
CviQI	GTAC	5 cut(s)	451, 530, 904, 1303, 1495
DdeI	CTNAG	3 cut(s)	1071, 1174, 1638
DraI	TTTAAA	1 cut(s)	1117
DraIII	CACNNNGTG	1 cut(s)	2113
EaeI	YGGCCR	1 cut(s)	1778
Eam1104I	CTCTTC	3 cut(s)	1079, 1354, 1500
EarI	CTCTTC	3 cut(s)	1079, 1354, 1500
Eco24I	GRGCYC	1 cut(s)	460
Eco31I	GGTCTC	1 cut(s)	1145
Eco47I	GGWCC	2 cut(s)	1848, 1961
Eco57I	CTGAAG	4 cut(s)	720, 1229, 1524, 1704
Eco91I	GGTNACC	2 cut(s)	238, 1062
EcoNI	CCTNNNNNAGG	2 cut(s)	1190, 1542
EcoO65I	GGTNACC	2 cut(s)	238, 1062
EcoRI	GAATTC	1 cut(s)	1825
EcoRII	CCWGG	3 cut(s)	682, 1012, 1975
EcoT22I	ATGCAT	1 cut(s)	11
EcoT38I	GRGCYC	1 cut(s)	460
FaqI	GGGAC	3 cut(s)	77, 1834, 2083
FauI	CCCGC	1 cut(s)	1052
FauNDI	CATATG	1 cut(s)	1600
FbaI	TGATCA	1 cut(s)	571
FblI	GTMKAC	1 cut(s)	191
Fnu4HI	GCNGC	5 cut(s)	445, 625, 872, 1271, 1689
FokI	GGATG	4 cut(s)	18, 348, 1523, 1904
FriOI	GRGCYC	1 cut(s)	460
Fsp4HI	GCNGC	5 cut(s)	445, 625, 872, 1271, 1689
FspBI	CTAG	5 cut(s)	294, 842, 882, 1350, 2043
FspI	TGCGCA	1 cut(s)	563
GlaI	GCGC	2 cut(s)	563, 1172
GluI	GCNGC	5 cut(s)	445, 625, 872, 1271, 1689
GsaI	CCCAGC	1 cut(s)	1437
HaeIII	GGCC	6 cut(s)	340, 1184, 1578, 1632, 1780, 1870
HapII	CCGG	1 cut(s)	1945
HhaI	GCGC	2 cut(s)	564, 1173
Hin6I	GCGC	2 cut(s)	562, 1171
HinP1I	GCGC	2 cut(s)	562, 1171
HincII	GTYRAC	1 cut(s)	192
HindII	GTYRAC	1 cut(s)	192
HindIII	AAGCTT	1 cut(s)	590
HpaII	CCGG	1 cut(s)	1945
HphI	GGTGA	3 cut(s)	566, 1056, 2090
Hpy166II	GTNNAC	4 cut(s)	192, 451, 530, 696
Hpy188I	TCNGA	8 cut(s)	208, 264, 603, 879, 1072, 1248, 1337, 1863
Hpy8I	GTNNAC	4 cut(s)	192, 451, 530, 696
Hpy99I	CGWCG	3 cut(s)	119, 179, 1224
HpyCH4III	ACNGT	3 cut(s)	758, 776, 1220
HpyCH4IV	ACGT	1 cut(s)	532
HpyF10VI	GCNNNNNNNGC	9 cut(s)	346, 368, 671, 1009, 1238, 1415, 1471, 1786, 2005
HpyF3I	CTNAG	3 cut(s)	1071, 1174, 1638
HpySE526I	ACGT	1 cut(s)	532
HspAI	GCGC	2 cut(s)	562, 1171
KpnI	GGTACC	1 cut(s)	907
Ksp22I	TGATCA	1 cut(s)	571
LguI	GCTCTTC	1 cut(s)	1354
LmnI	GCTCC	9 cut(s)	110, 265, 317, 652, 1030, 1338, 1547, 1685, 1786
Lsp1109I	GCAGC	4 cut(s)	456, 636, 883, 1700
LweI	GCATC	8 cut(s)	115, 130, 683, 1315, 1373, 1491, 1959, 1986
MaeI	CTAG	5 cut(s)	294, 842, 882, 1350, 2043
MaeII	ACGT	1 cut(s)	532
MaeIII	GTNAC	6 cut(s)	238, 716, 752, 776, 892, 1062
MflI	RGATCY	3 cut(s)	517, 1604, 1947
MhlI	GDGCHC	3 cut(s)	262, 322, 460
MlsI	TGGCCA	1 cut(s)	1780
MluCI	AATT	8 cut(s)	71, 98, 549, 808, 986, 1094, 1825, 1856
MluNI	TGGCCA	1 cut(s)	1780
MlyI	GAGTC	2 cut(s)	187, 2105
Mox20I	TGGCCA	1 cut(s)	1780
Mph1103I	ATGCAT	1 cut(s)	11
MroXI	GAANNNNTTC	4 cut(s)	990, 1231, 1732, 1912
MscI	TGGCCA	1 cut(s)	1780
MseI	TTAA	5 cut(s)	74, 491, 1050, 1116, 1794
MslI	CAYNNNNRTG	5 cut(s)	356, 759, 1265, 1593, 1815
Msp20I	TGGCCA	1 cut(s)	1780
MspA1I	CMGCKG	1 cut(s)	1966
MspI	CCGG	1 cut(s)	1945
MspR9I	CCNGG	3 cut(s)	684, 1014, 1977
Mva1269I	GAATGC	1 cut(s)	975
MvaI	CCWGG	3 cut(s)	684, 1014, 1977
MvnI	CGCG	2 cut(s)	1171, 1738
MwoI	GCNNNNNNNGC	9 cut(s)	346, 368, 671, 1009, 1238, 1415, 1471, 1786, 2005
NdeI	CATATG	1 cut(s)	1600
NlaIV	GGNNCC	7 cut(s)	112, 387, 519, 905, 1549, 1850, 1949
NmuCI	GTSAC	3 cut(s)	752, 776, 1062
NruI	TCGCGA	1 cut(s)	1738
NsbI	TGCGCA	1 cut(s)	563
NsiI	ATGCAT	1 cut(s)	11
NspI	RCATGY	3 cut(s)	724, 1106, 2030
NspV	TTCGAA	1 cut(s)	1726
OliI	CACNNNNGTG	2 cut(s)	356, 1593
PagI	TCATGA	1 cut(s)	585
PaqCI	CACCTGC	1 cut(s)	2115
PasI	CCCWGGG	1 cut(s)	1976
PciSI	GCTCTTC	1 cut(s)	1354
PctI	GAATGC	1 cut(s)	975
PdmI	GAANNNNTTC	4 cut(s)	990, 1231, 1732, 1912
PfeI	GAWTC	8 cut(s)	52, 267, 401, 470, 1400, 1442, 1733, 1913
PkrI	GCNGC	5 cut(s)	446, 626, 873, 1272, 1690
PleI	GAGTC	2 cut(s)	187, 2104
PpsI	GAGTC	2 cut(s)	187, 2104
PshAI	GACNNNNGTC	1 cut(s)	837
Psp6I	CCWGG	3 cut(s)	682, 1012, 1975
PspEI	GGTNACC	2 cut(s)	238, 1062
PspFI	CCCAGC	1 cut(s)	1433
PspGI	CCWGG	3 cut(s)	682, 1012, 1975
PspN4I	GGNNCC	7 cut(s)	112, 387, 519, 905, 1549, 1850, 1949
PspPI	GGNCC	3 cut(s)	1183, 1848, 1961
PstI	CTGCAG	1 cut(s)	358
PstNI	CAGNNNCTG	1 cut(s)	877
PsuI	RGATCY	3 cut(s)	517, 1604, 1947
RruI	TCGCGA	1 cut(s)	1738
RsaI	GTAC	5 cut(s)	452, 531, 905, 1304, 1496
RsaNI	GTAC	5 cut(s)	451, 530, 904, 1303, 1495
RseI	CAYNNNNRTG	5 cut(s)	356, 759, 1265, 1593, 1815
SalI	GTCGAC	1 cut(s)	190
SapI	GCTCTTC	1 cut(s)	1354
SaqAI	TTAA	5 cut(s)	74, 491, 1050, 1116, 1794
SatI	GCNGC	5 cut(s)	445, 625, 872, 1271, 1689
Sau96I	GGNCC	3 cut(s)	1183, 1848, 1961
SchI	GAGTC	2 cut(s)	187, 2105
ScrFI	CCNGG	3 cut(s)	684, 1014, 1977
SduI	GDGCHC	3 cut(s)	262, 322, 460
SfaNI	GCATC	8 cut(s)	115, 130, 683, 1315, 1373, 1491, 1959, 1986
SfcI	CTRYAG	3 cut(s)	354, 933, 1752
SfuI	TTCGAA	1 cut(s)	1726
SinI	GGWCC	2 cut(s)	1848, 1961
SmiMI	CAYNNNNRTG	5 cut(s)	356, 759, 1265, 1593, 1815
SmlI	CTYRAG	1 cut(s)	1988
SmoI	CTYRAG	1 cut(s)	1988
SpeI	ACTAGT	1 cut(s)	881
Sse9I	AATT	8 cut(s)	71, 98, 549, 808, 986, 1094, 1825, 1856
SsiI	CCGC	5 cut(s)	1059, 1169, 1271, 1964, 2035
SspMI	CTAG	5 cut(s)	294, 842, 882, 1350, 2043
StyD4I	CCNGG	3 cut(s)	682, 1012, 1975
TaaI	ACNGT	3 cut(s)	758, 776, 1220
TaiI	ACGT	1 cut(s)	535
TaqI	TCGA	6 cut(s)	17, 191, 542, 804, 1323, 1726
TasI	AATT	8 cut(s)	71, 98, 549, 808, 986, 1094, 1825, 1856
TatI	WGTACW	2 cut(s)	450, 1494
TauI	GCSGC	1 cut(s)	1273
TfiI	GAWTC	8 cut(s)	52, 267, 401, 470, 1400, 1442, 1733, 1913
Tru1I	TTAA	5 cut(s)	74, 491, 1050, 1116, 1794
Tru9I	TTAA	5 cut(s)	74, 491, 1050, 1116, 1794
TscAI	CASTG	6 cut(s)	358, 363, 382, 703, 1435, 1781
TseFI	GTSAC	3 cut(s)	752, 776, 1062
TseI	GCWGC	4 cut(s)	444, 624, 871, 1688
Tsp45I	GTSAC	3 cut(s)	752, 776, 1062
TspDTI	ATGAA	9 cut(s)	192, 225, 393, 602, 725, 983, 1691, 1908, 2025
TspGWI	ACGGA	1 cut(s)	1627
TspRI	CASTG	6 cut(s)	358, 363, 382, 703, 1435, 1781
VpaK11BI	GGWCC	2 cut(s)	1848, 1961
XagI	CCTNNNNNAGG	2 cut(s)	1190, 1542
XapI	RAATTY	2 cut(s)	549, 1825
XceI	RCATGY	3 cut(s)	724, 1106, 2030
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1640
XmiI	GTMKAC	1 cut(s)	191
XmnI	GAANNNNTTC	4 cut(s)	990, 1231, 1732, 1912
XspI	CTAG	5 cut(s)	294, 842, 882, 1350, 2043
Zsp2I	ATGCAT	1 cut(s)	11

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.