Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0005566

Physical Location & Seq

Genomic Coordinates Forward (+)

40383440 .. 40389522

Gene Structure 6083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG330900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGGGATGCATTTGCTCCAAAGGGCTTTTAGCCAATCAATATGTTTTGAAGAATCATCGTAGGGACAAAGAATTAAAATCAAATAAGTTGTCGAAGGAATTAGATGGAGCAGCCGTCGGGGTAGATGCTGGTGGAAATGATGCAACTACACGGTTGATAACCAATCATCGCACCGAGGACAATGCAGGGTCGACTCCCATTTCATCAGATGAAGGGGAGAAGAAGATCGGGGTTGGGGTTGGGGTTACCAAAGCAGGGGCAAGTGCTCCGAGATTCCCATCTGGGCTAAATAGGATAACTAGCATAACACATGGAGAAAGAGGAGCACAAGTTGTTGCTGGATGGCCTTCTTGGCTCACTGCAGTGGCAGGAGAAGCAATCAGTGGGTGGGTGCCTCGCAAGGCAGATTCATTTGAAAAACTGGACAAGATTGGACAAGGAACTTACAGCAGTGTGTACAGAGCCCGTGATCTTGAATCAAACAAAATAGTTGCATTAAAGAAGGTGCGATTTGCCAATATGGATCCAGAAAGTGTACGTTTTATGTCGAGAGAAATTCTTATTTTGCGCAGGCTTGATCACCCCAATATCATGAAGCTTGAAGGTCTGATTACATCAAGGGTTTCGGGCAGCTTATACCTTGTATTTGAATATATGGAGCATGATCTTGCAGGGATTGCATCAAGACCTGGGATCAAGTTCACTGAAGCACAGATCAAATGTTACATGCAACAGCTTCTTCGTGGACTTGAACATTGTCACAGTCATGGTATTTTGCACCGTGACATCAAGGGATCAAATCTTTTGATCGACAATTATGGCAACCTAAAGATCGCTGACTTTGGTCTAGCAACCTTTTACCGACCTCGTCAAAAGCAGCCTCTGACTAGTCGTGTAGTAACCCTGTGGTACCGACCACCTGAACTTTTGCTTGGCTCTACAGACTATGGGGTTTCTGTGGATTTGTGGAGTTCTGGTTGCATTCTTGCAGAATTGTTTCATGGGAAGCCTATCATGCCCGGAAGAACAGAGGTGGAGCAACTACATAAGATATTTAAGCTCTGCGGGTCACCTTCTGAGGAATACTGGAAGAGATCAAAATTGCCACATGCAACGATTTTTAAACCAACACAACCATACAAGCGTTGTGTTGCAGAGACCTTCAAAGATTTTCCGCGCTCAGCAATGGCCCTGTTGGAGGTTCTTCTGGCAGTAGAACCTGACCGTCGTGGAACAGCTTCTTCTGCACTTCAGAGTGAGTTCTTCACATCTATGCCGCTTCCCTGTGATCCTTCAACTTTGCCCAAGTACCCACCGAGCAAAGAGTTCGATGCCAAGCTCCGAGATGAGGAAGCTAGAAGGCGAAGAGCATCTGGTGGTAAAGGACATGGAGGGAGTTCAAAAGAATCAAAGGCTGTGCCAGCACCAGTTGGCACTTCTGGGCAGGAATCAACAGAGAACCAACAAGGGCAACATAAGCCAAAAAGCATCAGCGAGAAGTACATTCCTGAAGAGGATAGTGGCTCTGGCTTTCCTCTTGAACCTCCCAAAGGAGCCACATCAAATGGCTTCTCCCATTCAGGCCATTCAATGCACCCAAGTGCATATGGATCTACACGGAATATGGAGATGCGAGGCCAGTCTAAGAATGGTGCAGAGTTGAGAAGGCAGAACTCATATATGAATGGTGGAGCAGCCCAATCTTCCAGATTTTCCAGTTCAGCTTCAGTTCGAAGTGATTCGCGATTTGGTGGTGCTGTAGAAACTACTGCAAATCCACACTGGCCAGAGGAGCGTATTAACACCAGATATAATCATTTAGATGACGGGAATTCCTCTGCAAAACACGATTGGTCCCTTCAATTTCTGAATAGGCCAAAGTCTTCACAGAGAAAGGATGAACACTCATCTGGAAAGGATTCAGCAAGGGGTTATGCTACCAAGAAGAACCGGATCCACTACTCTGGACCGCTGATGCCCCCTGGGGGAAACCTTGAGGAGATGCTCAAAGAGCATGAAAAACAAATACAACATGCTGTCCGCAAAGCTAGAGTGGACAAAGCCAACACCAAGAAAGCCTATGGTGAAAATGGACAAACCGAGTCCCTACTTCACAATGTGAGAAATGGCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

711

Amino Acids

78.54

Weight (kDa)

9.51

Isoelectric Point (pI)

45.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	138 - 422	8.4e-68	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	141 - 351	3.7e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G57700
fragaria_vesca	FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28120 FvH4_5g28310
malus_domestica	MD08G1244800.v1.1 MD15G1439900.v1.1
prunus_persica	Prupe.1G582200_v2.0.a1 Prupe.1G582200_v2.0.a1 Prupe.1G582200_v2.0.a1 Prupe.1G582200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0220331
rosa_laevigata	RLG00000002229
rosa_multiflora	Rmu_sc0001136.1_g000085
rosa_roxburghii	Rroxscaffold_3G00239520
rosa_rugosa	Rorug07G0192900
rosa_samantha	Rh7AG334200 Rh7BG325100 Rh7CG351900 Rh7DG330900
rosa_wichuraiana	Rw7G028280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2121
Acc16I	TGCGCA	1 cut(s)	569
Acc36I	ACCTGC	1 cut(s)	2121
Acc65I	GGTACC	1 cut(s)	909
AccB1I	GGYRCC	2 cut(s)	391, 909
AccI	GTMKAC	1 cut(s)	191
AccII	CGCG	2 cut(s)	1177, 1744
AciI	CCGC	5 cut(s)	1065, 1175, 1277, 1970, 2041
AclWI	GGATC	8 cut(s)	518, 531, 701, 802, 1283, 1618, 1948, 1961
AcoI	YGGCCR	1 cut(s)	1784
AcsI	RAATTY	2 cut(s)	555, 1831
AcuI	CTGAAG	4 cut(s)	726, 1235, 1530, 1710
AdeI	CACNNNGTG	1 cut(s)	2119
AfaI	GTAC	5 cut(s)	458, 537, 911, 1310, 1502
AfiI	CCNNNNNNNGG	5 cut(s)	255, 1198, 1348, 1550, 1985
AhlI	ACTAGT	1 cut(s)	887
AjnI	CCWGG	2 cut(s)	688, 1981
AjuI	GAANNNNNNNTTGG	2 cut(s)	915, 947
AleI	CACNNNNGTG	2 cut(s)	362, 1599
AluBI	AGCT	9 cut(s)	598, 633, 736, 1060, 1238, 1339, 1355, 1724, 2048
AluI	AGCT	9 cut(s)	598, 633, 736, 1060, 1238, 1339, 1355, 1724, 2048
Alw21I	GWGCWC	2 cut(s)	268, 328
Alw26I	GTCTC	1 cut(s)	1151
AlwI	GGATC	8 cut(s)	518, 531, 701, 802, 1283, 1618, 1948, 1961
AlwNI	CAGNNNCTG	1 cut(s)	883
AoxI	GGCC	6 cut(s)	344, 1188, 1582, 1636, 1784, 1874
ApeKI	GCWGC	4 cut(s)	110, 630, 877, 1694
ApoI	RAATTY	2 cut(s)	555, 1831
ArsI	GACNNNNNNTTYG	2 cut(s)	74, 106
Asp700I	GAANNNNTTC	4 cut(s)	996, 1237, 1738, 1918
Asp718I	GGTACC	1 cut(s)	909
AspLEI	GCGC	2 cut(s)	570, 1179
AspS9I	GGNCC	3 cut(s)	1189, 1854, 1967
AsuC2I	CCSGG	1 cut(s)	1020
AsuHPI	GGTGA	3 cut(s)	572, 1062, 2096
AsuII	TTCGAA	1 cut(s)	1732
AvaII	GGWCC	2 cut(s)	1854, 1967
BalI	TGGCCA	1 cut(s)	1786
BamHI	GGATCC	2 cut(s)	523, 1953
BanI	GGYRCC	2 cut(s)	391, 909
BanII	GRGCYC	1 cut(s)	466
BbsI	GAAGAC	1 cut(s)	1875
Bbv12I	GWGCWC	2 cut(s)	268, 328
BbvI	GCAGC	4 cut(s)	122, 642, 889, 1706
BccI	CCATC	3 cut(s)	98, 286, 336
BceAI	ACGGC	1 cut(s)	98
BcgI	CGANNNNNNTGC	4 cut(s)	164, 198, 1309, 1343
BciT130I	CCWGG	2 cut(s)	690, 1983
BclI	TGATCA	1 cut(s)	577
BcnI	CCSGG	1 cut(s)	1020
BcoDI	GTCTC	1 cut(s)	1151
BcuI	ACTAGT	1 cut(s)	887
BfaI	CTAG	5 cut(s)	300, 848, 888, 1356, 2049
BfmI	CTRYAG	3 cut(s)	360, 939, 1758
BfuAI	ACCTGC	1 cut(s)	2121
BglI	GCCNNNNNGGC	1 cut(s)	352
BisI	GCNGC	5 cut(s)	111, 631, 878, 1277, 1695
BlpI	GCTNAGC	1 cut(s)	1180
BlsI	GCNGC	5 cut(s)	112, 632, 879, 1278, 1696
Bme1390I	CCNGG	3 cut(s)	690, 1020, 1983
Bme18I	GGWCC	2 cut(s)	1854, 1967
BmgT120I	GGNCC	3 cut(s)	1189, 1854, 1967
BmiI	GGNNCC	6 cut(s)	393, 525, 911, 1555, 1856, 1955
BmrFI	CCNGG	3 cut(s)	690, 1020, 1983
BmsI	GCATC	9 cut(s)	115, 130, 689, 1321, 1379, 1497, 1620, 1965, 1992
BoxI	GACNNNNGTC	1 cut(s)	843
BpiI	GAAGAC	1 cut(s)	1875
Bpu1102I	GCTNAGC	1 cut(s)	1180
Bpu14I	TTCGAA	1 cut(s)	1732
BpuEI	CTTGAG	1 cut(s)	2015
BpuMI	CCSGG	1 cut(s)	1020
BsaBI	GATNNNNATC	1 cut(s)	277
BsaI	GGTCTC	1 cut(s)	1151
BsaJI	CCNNGG	4 cut(s)	174, 689, 1981, 1982
BsaWI	WCCGGW	1 cut(s)	1950
BsaXI	ACNNNNNCTCC	6 cut(s)	99, 129, 315, 345, 961, 991
Bsc4I	CCNNNNNNNGG	5 cut(s)	255, 1198, 1348, 1550, 1985
Bse1I	ACTGG	6 cut(s)	426, 1091, 1427, 1639, 1716, 1787
Bse3DI	GCAATG	1 cut(s)	1191
Bse8I	GATNNNNATC	1 cut(s)	277
BseBI	CCWGG	2 cut(s)	690, 1983
BseDI	CCNNGG	4 cut(s)	174, 689, 1981, 1982
BseGI	GGATG	3 cut(s)	11, 347, 1903
BseJI	GATNNNNATC	1 cut(s)	277
BseLI	CCNNNNNNNGG	5 cut(s)	255, 1198, 1348, 1550, 1985
BseMI	GCAATG	1 cut(s)	1191
BseMII	CTCAG	2 cut(s)	1068, 1194
BseNI	ACTGG	6 cut(s)	426, 1091, 1427, 1639, 1716, 1787
BseRI	GAGGAG	3 cut(s)	336, 1805, 2012
BseXI	GCAGC	4 cut(s)	122, 642, 889, 1706
BsgI	GTGCAG	2 cut(s)	1230, 1674
Bsh1236I	CGCG	2 cut(s)	1177, 1744
BshFI	GGCC	6 cut(s)	346, 1190, 1584, 1638, 1786, 1876
BshNI	GGYRCC	2 cut(s)	391, 909
BsiHKAI	GWGCWC	2 cut(s)	268, 328
BsiSI	CCGG	2 cut(s)	1020, 1951
BslFI	GGGAC	3 cut(s)	77, 1840, 2089
BslI	CCNNNNNNNGG	5 cut(s)	255, 1198, 1348, 1550, 1985
BsmAI	GTCTC	1 cut(s)	1151
BsmFI	GGGAC	3 cut(s)	77, 1840, 2089
BsmI	GAATGC	1 cut(s)	981
BsnI	GGCC	6 cut(s)	346, 1190, 1584, 1638, 1786, 1876
Bso31I	GGTCTC	1 cut(s)	1151
Bsp119I	TTCGAA	1 cut(s)	1732
Bsp1286I	GDGCHC	3 cut(s)	268, 328, 466
Bsp1407I	TGTACA	1 cut(s)	456
Bsp1720I	GCTNAGC	1 cut(s)	1180
Bsp68I	TCGCGA	1 cut(s)	1744
BspACI	CCGC	5 cut(s)	1065, 1175, 1277, 1970, 2041
BspANI	GGCC	6 cut(s)	346, 1190, 1584, 1638, 1786, 1876
BspCNI	CTCAG	2 cut(s)	1069, 1193
BspFNI	CGCG	2 cut(s)	1177, 1744
BspHI	TCATGA	1 cut(s)	591
BspLI	GGNNCC	6 cut(s)	393, 525, 911, 1555, 1856, 1955
BspMAI	CTGCAG	1 cut(s)	364
BspMI	ACCTGC	1 cut(s)	2121
BspPI	GGATC	8 cut(s)	518, 531, 701, 802, 1283, 1618, 1948, 1961
BspQI	GCTCTTC	1 cut(s)	1360
BspT104I	TTCGAA	1 cut(s)	1732
BspT107I	GGYRCC	2 cut(s)	391, 909
BspTNI	GGTCTC	1 cut(s)	1151
BsrDI	GCAATG	1 cut(s)	1191
BsrGI	TGTACA	1 cut(s)	456
BsrI	ACTGG	6 cut(s)	426, 1091, 1427, 1639, 1716, 1787
BssECI	CCNNGG	4 cut(s)	174, 689, 1981, 1982
Bst2UI	CCWGG	2 cut(s)	690, 1983
Bst4CI	ACNGT	4 cut(s)	153, 764, 782, 1226
Bst6I	CTCTTC	3 cut(s)	1085, 1360, 1506
BstAPI	GCANNNNNTGC	1 cut(s)	677
BstAUI	TGTACA	1 cut(s)	456
BstBI	TTCGAA	1 cut(s)	1732
BstC8I	GCNNGC	2 cut(s)	572, 1422
BstDEI	CTNAG	3 cut(s)	1077, 1180, 1644
BstEII	GGTNACC	2 cut(s)	244, 1068
BstENI	CCTNNNNNAGG	2 cut(s)	1196, 1548
BstF5I	GGATG	3 cut(s)	11, 347, 1903
BstFNI	CGCG	2 cut(s)	1177, 1744
BstHHI	GCGC	2 cut(s)	570, 1179
BstMAI	GTCTC	1 cut(s)	1151
BstMWI	GCNNNNNNNGC	9 cut(s)	352, 374, 677, 1015, 1244, 1421, 1477, 1792, 2011
BstNI	CCWGG	2 cut(s)	690, 1983
BstNSI	RCATGY	3 cut(s)	730, 1112, 2036
BstPAI	GACNNNNGTC	1 cut(s)	843
BstPI	GGTNACC	2 cut(s)	244, 1068
BstSCI	CCNGG	3 cut(s)	688, 1018, 1981
BstSFI	CTRYAG	3 cut(s)	360, 939, 1758
BstUI	CGCG	2 cut(s)	1177, 1744
BstV1I	GCAGC	4 cut(s)	122, 642, 889, 1706
BstV2I	GAAGAC	1 cut(s)	1875
BstX2I	RGATCY	3 cut(s)	523, 1610, 1953
BstXI	CCANNNNNNTGG	1 cut(s)	1964
BstYI	RGATCY	3 cut(s)	523, 1610, 1953
BsuRI	GGCC	6 cut(s)	346, 1190, 1584, 1638, 1786, 1876
BtgZI	GCGATG	1 cut(s)	152
BtsCI	GGATG	3 cut(s)	11, 347, 1903
BtsI	GCAGTG	3 cut(s)	357, 369, 457
BtsIMutI	CAGTG	6 cut(s)	357, 369, 388, 457, 702, 1780
BtuMI	TCGCGA	1 cut(s)	1744
BveI	ACCTGC	1 cut(s)	2121
Cac8I	GCNNGC	2 cut(s)	572, 1422
CaiI	CAGNNNCTG	1 cut(s)	883
CciI	TCATGA	1 cut(s)	591
CfoI	GCGC	2 cut(s)	570, 1179
Cfr13I	GGNCC	3 cut(s)	1189, 1854, 1967
Csp6I	GTAC	5 cut(s)	457, 536, 910, 1309, 1501
CviQI	GTAC	5 cut(s)	457, 536, 910, 1309, 1501
DdeI	CTNAG	3 cut(s)	1077, 1180, 1644
DraI	TTTAAA	1 cut(s)	1123
DraIII	CACNNNGTG	1 cut(s)	2119
EaeI	YGGCCR	1 cut(s)	1784
Eam1104I	CTCTTC	3 cut(s)	1085, 1360, 1506
EarI	CTCTTC	3 cut(s)	1085, 1360, 1506
Eco24I	GRGCYC	1 cut(s)	466
Eco31I	GGTCTC	1 cut(s)	1151
Eco47I	GGWCC	2 cut(s)	1854, 1967
Eco57I	CTGAAG	4 cut(s)	726, 1235, 1530, 1710
Eco91I	GGTNACC	2 cut(s)	244, 1068
EcoNI	CCTNNNNNAGG	2 cut(s)	1196, 1548
EcoO65I	GGTNACC	2 cut(s)	244, 1068
EcoRI	GAATTC	1 cut(s)	1831
EcoRII	CCWGG	2 cut(s)	688, 1981
EcoT22I	ATGCAT	1 cut(s)	11
EcoT38I	GRGCYC	1 cut(s)	466
FaqI	GGGAC	3 cut(s)	77, 1840, 2089
FauI	CCCGC	1 cut(s)	1058
FauNDI	CATATG	1 cut(s)	1606
FbaI	TGATCA	1 cut(s)	577
FblI	GTMKAC	1 cut(s)	191
Fnu4HI	GCNGC	5 cut(s)	111, 631, 878, 1277, 1695
FokI	GGATG	3 cut(s)	18, 354, 1910
FriOI	GRGCYC	1 cut(s)	466
Fsp4HI	GCNGC	5 cut(s)	111, 631, 878, 1277, 1695
FspBI	CTAG	5 cut(s)	300, 848, 888, 1356, 2049
FspI	TGCGCA	1 cut(s)	569
GlaI	GCGC	2 cut(s)	569, 1178
GluI	GCNGC	5 cut(s)	111, 631, 878, 1277, 1695
HaeIII	GGCC	6 cut(s)	346, 1190, 1584, 1638, 1786, 1876
HapII	CCGG	2 cut(s)	1020, 1951
HhaI	GCGC	2 cut(s)	570, 1179
Hin6I	GCGC	2 cut(s)	568, 1177
HinP1I	GCGC	2 cut(s)	568, 1177
HincII	GTYRAC	1 cut(s)	192
HindII	GTYRAC	1 cut(s)	192
HindIII	AAGCTT	1 cut(s)	596
HpaII	CCGG	2 cut(s)	1020, 1951
HphI	GGTGA	3 cut(s)	572, 1062, 2096
Hpy166II	GTNNAC	6 cut(s)	192, 457, 536, 702, 746, 2056
Hpy188I	TCNGA	8 cut(s)	208, 270, 609, 885, 1078, 1254, 1343, 1869
Hpy8I	GTNNAC	6 cut(s)	192, 457, 536, 702, 746, 2056
Hpy99I	CGWCG	2 cut(s)	119, 1230
HpyCH4III	ACNGT	4 cut(s)	153, 764, 782, 1226
HpyCH4IV	ACGT	1 cut(s)	538
HpyF10VI	GCNNNNNNNGC	9 cut(s)	352, 374, 677, 1015, 1244, 1421, 1477, 1792, 2011
HpyF3I	CTNAG	3 cut(s)	1077, 1180, 1644
HpySE526I	ACGT	1 cut(s)	538
HspAI	GCGC	2 cut(s)	568, 1177
KpnI	GGTACC	1 cut(s)	913
Ksp22I	TGATCA	1 cut(s)	577
LguI	GCTCTTC	1 cut(s)	1360
Lsp1109I	GCAGC	4 cut(s)	122, 642, 889, 1706
LweI	GCATC	9 cut(s)	115, 130, 689, 1321, 1379, 1497, 1620, 1965, 1992
MaeI	CTAG	5 cut(s)	300, 848, 888, 1356, 2049
MaeII	ACGT	1 cut(s)	538
MaeIII	GTNAC	6 cut(s)	244, 722, 758, 782, 898, 1068
MflI	RGATCY	3 cut(s)	523, 1610, 1953
MhlI	GDGCHC	3 cut(s)	268, 328, 466
MlsI	TGGCCA	1 cut(s)	1786
MluCI	AATT	8 cut(s)	71, 98, 555, 814, 992, 1100, 1831, 1862
MluNI	TGGCCA	1 cut(s)	1786
MlyI	GAGTC	2 cut(s)	187, 2111
MmeI	TCCRAC	1 cut(s)	1176
Mox20I	TGGCCA	1 cut(s)	1786
Mph1103I	ATGCAT	1 cut(s)	11
MroXI	GAANNNNTTC	4 cut(s)	996, 1237, 1738, 1918
MscI	TGGCCA	1 cut(s)	1786
MseI	TTAA	5 cut(s)	74, 497, 1056, 1122, 1800
MslI	CAYNNNNRTG	5 cut(s)	362, 765, 1271, 1599, 1821
Msp20I	TGGCCA	1 cut(s)	1786
MspA1I	CMGCKG	1 cut(s)	1972
MspI	CCGG	2 cut(s)	1020, 1951
MspR9I	CCNGG	3 cut(s)	690, 1020, 1983
Mva1269I	GAATGC	1 cut(s)	981
MvaI	CCWGG	2 cut(s)	690, 1983
MvnI	CGCG	2 cut(s)	1177, 1744
MwoI	GCNNNNNNNGC	9 cut(s)	352, 374, 677, 1015, 1244, 1421, 1477, 1792, 2011
NciI	CCSGG	1 cut(s)	1020
NdeI	CATATG	1 cut(s)	1606
NlaIV	GGNNCC	6 cut(s)	393, 525, 911, 1555, 1856, 1955
NmuCI	GTSAC	3 cut(s)	758, 782, 1068
NruI	TCGCGA	1 cut(s)	1744
NsbI	TGCGCA	1 cut(s)	569
NsiI	ATGCAT	1 cut(s)	11
NspI	RCATGY	3 cut(s)	730, 1112, 2036
NspV	TTCGAA	1 cut(s)	1732
OliI	CACNNNNGTG	2 cut(s)	362, 1599
PagI	TCATGA	1 cut(s)	591
PaqCI	CACCTGC	1 cut(s)	2121
PasI	CCCWGGG	1 cut(s)	1982
PciSI	GCTCTTC	1 cut(s)	1360
PctI	GAATGC	1 cut(s)	981
PdmI	GAANNNNTTC	4 cut(s)	996, 1237, 1738, 1918
PfeI	GAWTC	8 cut(s)	52, 273, 407, 476, 1406, 1448, 1739, 1919
PflFI	GACNNNGTC	1 cut(s)	867
PkrI	GCNGC	5 cut(s)	112, 632, 879, 1278, 1696
PleI	GAGTC	2 cut(s)	187, 2110
PpsI	GAGTC	2 cut(s)	187, 2110
PshAI	GACNNNNGTC	1 cut(s)	843
Psp6I	CCWGG	2 cut(s)	688, 1981
PspEI	GGTNACC	2 cut(s)	244, 1068
PspGI	CCWGG	2 cut(s)	688, 1981
PspN4I	GGNNCC	6 cut(s)	393, 525, 911, 1555, 1856, 1955
PspPI	GGNCC	3 cut(s)	1189, 1854, 1967
PstI	CTGCAG	1 cut(s)	364
PstNI	CAGNNNCTG	1 cut(s)	883
PsuI	RGATCY	3 cut(s)	523, 1610, 1953
PsyI	GACNNNGTC	1 cut(s)	867
RruI	TCGCGA	1 cut(s)	1744
RsaI	GTAC	5 cut(s)	458, 537, 911, 1310, 1502
RsaNI	GTAC	5 cut(s)	457, 536, 910, 1309, 1501
RseI	CAYNNNNRTG	5 cut(s)	362, 765, 1271, 1599, 1821
SalI	GTCGAC	1 cut(s)	190
SapI	GCTCTTC	1 cut(s)	1360
SaqAI	TTAA	5 cut(s)	74, 497, 1056, 1122, 1800
SatI	GCNGC	5 cut(s)	111, 631, 878, 1277, 1695
Sau96I	GGNCC	3 cut(s)	1189, 1854, 1967
SchI	GAGTC	2 cut(s)	187, 2111
ScrFI	CCNGG	3 cut(s)	690, 1020, 1983
SduI	GDGCHC	3 cut(s)	268, 328, 466
SfaNI	GCATC	9 cut(s)	115, 130, 689, 1321, 1379, 1497, 1620, 1965, 1992
SfcI	CTRYAG	3 cut(s)	360, 939, 1758
SfuI	TTCGAA	1 cut(s)	1732
SinI	GGWCC	2 cut(s)	1854, 1967
SmiMI	CAYNNNNRTG	5 cut(s)	362, 765, 1271, 1599, 1821
SmlI	CTYRAG	1 cut(s)	1994
SmoI	CTYRAG	1 cut(s)	1994
SpeI	ACTAGT	1 cut(s)	887
Sse9I	AATT	8 cut(s)	71, 98, 555, 814, 992, 1100, 1831, 1862
SsiI	CCGC	5 cut(s)	1065, 1175, 1277, 1970, 2041
SspMI	CTAG	5 cut(s)	300, 848, 888, 1356, 2049
StyD4I	CCNGG	3 cut(s)	688, 1018, 1981
TaaI	ACNGT	4 cut(s)	153, 764, 782, 1226
TaiI	ACGT	1 cut(s)	541
TaqI	TCGA	6 cut(s)	92, 191, 548, 810, 1329, 1732
TasI	AATT	8 cut(s)	71, 98, 555, 814, 992, 1100, 1831, 1862
TatI	WGTACW	2 cut(s)	456, 1500
TauI	GCSGC	1 cut(s)	1279
TfiI	GAWTC	8 cut(s)	52, 273, 407, 476, 1406, 1448, 1739, 1919
Tru1I	TTAA	5 cut(s)	74, 497, 1056, 1122, 1800
Tru9I	TTAA	5 cut(s)	74, 497, 1056, 1122, 1800
TscAI	CASTG	6 cut(s)	364, 369, 388, 457, 709, 1787
TseFI	GTSAC	3 cut(s)	758, 782, 1068
TseI	GCWGC	4 cut(s)	110, 630, 877, 1694
Tsp45I	GTSAC	3 cut(s)	758, 782, 1068
TspDTI	ATGAA	8 cut(s)	192, 225, 399, 608, 989, 1697, 1914, 2031
TspGWI	ACGGA	1 cut(s)	1633
TspRI	CASTG	6 cut(s)	364, 369, 388, 457, 709, 1787
Tth111I	GACNNNGTC	1 cut(s)	867
VpaK11BI	GGWCC	2 cut(s)	1854, 1967
XagI	CCTNNNNNAGG	2 cut(s)	1196, 1548
XapI	RAATTY	2 cut(s)	555, 1831
XceI	RCATGY	3 cut(s)	730, 1112, 2036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1646
XmiI	GTMKAC	1 cut(s)	191
XmnI	GAANNNNTTC	4 cut(s)	996, 1237, 1738, 1918
XspI	CTAG	5 cut(s)	300, 848, 888, 1356, 2049
Zsp2I	ATGCAT	1 cut(s)	11

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.