Rh7CG160500

intracellular protein transport protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
13196724 .. 13201029
4306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG160500.1

Sequence Viewer

Length: 1554 bp
ATGGTTCATTGCCTCTCGTTTCAGGTGGCGCCTTATAACCCTGCAGTTACTCCCACCAGTTCTTTAGACTTTAAGGGAAGGATTGGCGAGTCACATTATAATCTTAAAACATCTACAGAACTGCTAAAGGTCTTGAACCGGATTTGGAGTTTGGAGGAGCAGCATACGTCTAATATAGCACTGATAAAAGCACTCAAGGCTGAGTTGGATCATGCCCGTGTCAAGATCAAAGATTTGGTTAGGGTACGGCAAGCTGATAGACATGAGCTAGACAATTTGATGAAGCAAATTGGAGAAGATAAACTAGTTAGGAAGAGCAAAGAACAGGATCGGATACATGCTGCAGTTCAGTCTGTGAGGGATGAACTAGAAGATGAGAGAAGGTTAAGAAAACGATCAGAAAGCCTACACAGGAAGTTAGCACGAGACCTCTCTGAGGTGAAATCTTCTCTTTCCAATTCCCTGAGAGAGCTTGAAAGTGAGAGGAAATCGAGGAAGTTGTTGGAAGACCTATGCGATGAATTTGCTAAAGGCATTAAAGACTATGAACAAGAGGTGCACTTTTTGAAACAGAAATCTGACAAGGATTGGACTGGAAGCTCTGACCGTGATCGATTGATTCTCCATGTATCTGAATCATGGCTGGATGAACGGATGCAGATGCAGCTAGAACAAACCGAGTGTGGTCTACCCGAAAAGAACTCAATAGTGGACAAACTAAGCCTTGAAATAGAGACCTTCCTTCGAGCTAAACATATGAACAACACTCTTAAGAATACCGAAAGTCTGTTGCCAAGGGATCGTCAAAAGAATTCACTGGAATCTGTTCCGCTTAATGAGGCTGTGAGTGTACCTCAAGATGCAGGTGATGAAGAAGATTCTTTAGGCAGTGACTCTCATTGTTTCGAGCTCAATAAACCGAGCAACAGTGACTTCAAATTGCAGGTGGAGGAAGCTGTAGAGAATGGTATTGATGAAAAGGTAAAATCAGAGCACTCAAAGAAAAAACCTGCCTCTTCTGAAAGAGTAAGAAGCCGCACTCCGTCCAGCTTGCAAGTTAAGTTTGAAGAACAGATGGCTTGGGCCTTGTCATGTAGTGAAAATAAGAAATCCCAAGCGGTAAATGCAGAGCAGGGGAAAACAGAAGAAGTGAAGCAAACTGAAACAAGCATGTCTCAAAAATCTGAACATTGTGAAGCCACAGAAGATGAAACTTACAGAAAGGGAAATAAACAAGATGAAAGACATGGTTCTAATCCGAATTACATGGCTGAAAACCATTTAAGAAATCAACTTTTGATATCAGATGGTGGGCTTGTACATCCTGAAAATAATTTGAATGAGGCTTCTTGCAGTAATACTGGATGGAGGAATCAGGCAAGTCCAGTTCGACAGTGGATGGCAAGACTAACCTCACCAACTCTTGACATATCAGAGTCTTCTTCCAAGTTGCCTCTGCGGAAAAAGGAAAATACCTTGAAGGCAAAGCTTCTTGAAGCAAGGTCTAAAGGACAACGGTCAACACGAACAAAAGCTTTCAAAAGTACCTCTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

517

Amino Acids

59.14

Weight (kDa)

6.99

Isoelectric Point (pI)

50.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 36, 99
AarI CACCTGC 2 cut(s) 854, 934
Acc36I ACCTGC 3 cut(s) 854, 934, 1018
AccB1I GGYRCC 1 cut(s) 28
AccI GTMKAC 1 cut(s) 688
AciI CCGC 4 cut(s) 830, 1036, 1118, 1459
AclWI GGATC 3 cut(s) 216, 336, 807
AcsI RAATTY 2 cut(s) 521, 811
AcyI GRCGYC 1 cut(s) 29
AfaI GTAC 4 cut(s) 246, 852, 1320, 1546
AfiI CCNNNNNNNGG 1 cut(s) 436
AflII CTTAAG 1 cut(s) 770
AhlI ACTAGT 1 cut(s) 304
Alw21I GWGCWC 3 cut(s) 561, 912, 996
Alw26I GTCTC 3 cut(s) 420, 728, 1179
Alw44I GTGCAC 1 cut(s) 557
AlwI GGATC 3 cut(s) 216, 336, 807
AoxI GGCC 1 cut(s) 1083
ApaLI GTGCAC 1 cut(s) 557
ApeKI GCWGC 3 cut(s) 160, 341, 664
ApoI RAATTY 2 cut(s) 521, 811
Asp700I GAANNNNTTC 1 cut(s) 825
AspLEI GCGC 1 cut(s) 31
AspS9I GGNCC 1 cut(s) 1083
AsuHPI GGTGA 3 cut(s) 451, 878, 1407
BaeGI GKGCMC 1 cut(s) 561
BanI GGYRCC 1 cut(s) 28
BanII GRGCYC 1 cut(s) 912
BauI CACGAG 1 cut(s) 423
BbsI GAAGAC 2 cut(s) 513, 1431
Bbv12I GWGCWC 3 cut(s) 561, 912, 996
BbvI GCAGC 3 cut(s) 172, 328, 676
BccI CCATC 4 cut(s) 1069, 1301, 1359, 1393
BceAI ACGGC 1 cut(s) 263
BcgI CGANNNNNNTGC 2 cut(s) 506, 540
BciVI GTATCC 1 cut(s) 327
BcoDI GTCTC 3 cut(s) 420, 728, 1179
BcuI ACTAGT 1 cut(s) 304
BfaI CTAG 4 cut(s) 269, 305, 368, 668
BfmI CTRYAG 4 cut(s) 42, 114, 342, 957
BfoI RGCGCY 1 cut(s) 32
BfrI CTTAAG 1 cut(s) 770
BfuAI ACCTGC 3 cut(s) 854, 934, 1018
BfuI GTATCC 1 cut(s) 327
BisI GCNGC 4 cut(s) 161, 342, 665, 1036
BlsI GCNGC 4 cut(s) 162, 343, 666, 1037
BmgT120I GGNCC 1 cut(s) 1083
BmiI GGNNCC 1 cut(s) 30
BmsI GCATC 3 cut(s) 645, 651, 850
BoxI GACNNNNGTC 1 cut(s) 1516
BpiI GAAGAC 2 cut(s) 513, 1431
BplI GAGNNNNNCTC 2 cut(s) 838, 870
BpuEI CTTGAG 2 cut(s) 179, 840
Bsa29I ATCGAT 1 cut(s) 613
BsaHI GRCGYC 1 cut(s) 29
BsaI GGTCTC 2 cut(s) 420, 728
BsaJI CCNNGG 1 cut(s) 794
BsaWI WCCGGW 1 cut(s) 138
Bsc4I CCNNNNNNNGG 1 cut(s) 436
Bse1I ACTGG 5 cut(s) 57, 598, 822, 1366, 1385
Bse3DI GCAATG 1 cut(s) 7
BseCI ATCGAT 1 cut(s) 613
BseDI CCNNGG 1 cut(s) 794
BseGI GGATG 6 cut(s) 367, 652, 660, 1321, 1370, 1404
BseLI CCNNNNNNNGG 1 cut(s) 436
BseMI GCAATG 1 cut(s) 7
BseMII CTCAG 3 cut(s) 192, 426, 455
BseNI ACTGG 5 cut(s) 57, 598, 822, 1366, 1385
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 3 cut(s) 172, 328, 676
BshFI GGCC 1 cut(s) 1085
BshNI GGYRCC 1 cut(s) 28
BshVI ATCGAT 1 cut(s) 613
BsiHKAI GWGCWC 3 cut(s) 561, 912, 996
BsiSI CCGG 1 cut(s) 139
BslI CCNNNNNNNGG 1 cut(s) 436
BsmAI GTCTC 3 cut(s) 420, 728, 1179
BsnI GGCC 1 cut(s) 1085
Bso31I GGTCTC 2 cut(s) 420, 728
Bsp1286I GDGCHC 3 cut(s) 561, 912, 996
Bsp1407I TGTACA 1 cut(s) 1318
Bsp143I GATC 6 cut(s) 208, 225, 328, 395, 610, 799
BspACI CCGC 4 cut(s) 830, 1036, 1118, 1459
BspANI GGCC 1 cut(s) 1085
BspCNI CTCAG 3 cut(s) 193, 427, 456
BspDI ATCGAT 1 cut(s) 613
BspLI GGNNCC 1 cut(s) 30
BspMAI CTGCAG 2 cut(s) 46, 346
BspMI ACCTGC 3 cut(s) 854, 934, 1018
BspPI GGATC 3 cut(s) 216, 336, 807
BspQI GCTCTTC 1 cut(s) 308
BspT107I GGYRCC 1 cut(s) 28
BspTI CTTAAG 1 cut(s) 770
BspTNI GGTCTC 2 cut(s) 420, 728
BsrDI GCAATG 1 cut(s) 7
BsrGI TGTACA 1 cut(s) 1318
BsrI ACTGG 5 cut(s) 57, 598, 822, 1366, 1385
BssECI CCNNGG 1 cut(s) 794
BssMI GATC 6 cut(s) 208, 225, 328, 395, 610, 799
BssNI GRCGYC 1 cut(s) 29
BssSI CACGAG 1 cut(s) 423
BssT1I CCWWGG 1 cut(s) 794
Bst2BI CACGAG 1 cut(s) 423
Bst4CI ACNGT 4 cut(s) 608, 929, 1395, 1518
Bst6I CTCTTC 2 cut(s) 308, 1021
BstACI GRCGYC 1 cut(s) 29
BstAFI CTTAAG 1 cut(s) 770
BstAUI TGTACA 1 cut(s) 1318
BstC8I GCNNGC 2 cut(s) 252, 1052
BstDEI CTNAG 4 cut(s) 201, 435, 464, 719
BstENI CCTNNNNNAGG 1 cut(s) 434
BstF5I GGATG 6 cut(s) 367, 652, 660, 1321, 1370, 1404
BstH2I RGCGCY 1 cut(s) 32
BstHHI GCGC 1 cut(s) 31
BstKTI GATC 6 cut(s) 211, 228, 331, 398, 613, 802
BstMAI GTCTC 3 cut(s) 420, 728, 1179
BstMBI GATC 6 cut(s) 208, 225, 328, 395, 610, 799
BstMWI GCNNNNNNNGC 3 cut(s) 197, 664, 1124
BstNSI RCATGY 2 cut(s) 341, 1174
BstPAI GACNNNNGTC 1 cut(s) 1516
BstSFI CTRYAG 4 cut(s) 42, 114, 342, 957
BstSLI GKGCMC 1 cut(s) 561
BstV1I GCAGC 3 cut(s) 172, 328, 676
BstV2I GAAGAC 2 cut(s) 513, 1431
Bsu15I ATCGAT 1 cut(s) 613
BsuI GTATCC 1 cut(s) 327
BsuRI GGCC 1 cut(s) 1085
BsuTUI ATCGAT 1 cut(s) 613
BtgZI GCGATG 1 cut(s) 531
BtsCI GGATG 6 cut(s) 367, 652, 660, 1321, 1370, 1404
BtsI GCAGTG 1 cut(s) 895
BtsIMutI CAGTG 5 cut(s) 179, 815, 895, 934, 1400
BveI ACCTGC 3 cut(s) 854, 934, 1018
Cac8I GCNNGC 2 cut(s) 252, 1052
CfoI GCGC 1 cut(s) 31
Cfr13I GGNCC 1 cut(s) 1083
ClaI ATCGAT 1 cut(s) 613
Csp6I GTAC 4 cut(s) 245, 851, 1319, 1545
CviAII CATG 9 cut(s) 212, 263, 338, 626, 639, 1092, 1171, 1247, 1267
CviQI GTAC 4 cut(s) 245, 851, 1319, 1545
DdeI CTNAG 4 cut(s) 201, 435, 464, 719
DinI GGCGCC 1 cut(s) 30
DpnI GATC 6 cut(s) 210, 227, 330, 397, 612, 801
DpnII GATC 6 cut(s) 208, 225, 328, 395, 610, 799
Eam1104I CTCTTC 2 cut(s) 308, 1021
EarI CTCTTC 2 cut(s) 308, 1021
Ecl136II GAGCTC 1 cut(s) 910
Eco130I CCWWGG 1 cut(s) 794
Eco24I GRGCYC 1 cut(s) 912
Eco31I GGTCTC 2 cut(s) 420, 728
Eco32I GATATC 1 cut(s) 1302
Eco53kI GAGCTC 1 cut(s) 910
EcoICRI GAGCTC 1 cut(s) 910
EcoNI CCTNNNNNAGG 1 cut(s) 434
EcoRI GAATTC 1 cut(s) 811
EcoRV GATATC 1 cut(s) 1302
EcoT14I CCWWGG 1 cut(s) 794
EcoT38I GRGCYC 1 cut(s) 912
EgeI GGCGCC 1 cut(s) 30
EheI GGCGCC 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 794
FaeI CATG 9 cut(s) 215, 266, 341, 629, 642, 1095, 1174, 1250, 1270
FalI AAGNNNNNCTT 1 cut(s) 1534
FatI CATG 9 cut(s) 211, 262, 337, 625, 638, 1091, 1170, 1246, 1266
FauNDI CATATG 1 cut(s) 756
FblI GTMKAC 1 cut(s) 688
Fnu4HI GCNGC 4 cut(s) 161, 342, 665, 1036
FokI GGATG 6 cut(s) 374, 659, 667, 1308, 1377, 1411
FriOI GRGCYC 1 cut(s) 912
Fsp4HI GCNGC 4 cut(s) 161, 342, 665, 1036
FspBI CTAG 4 cut(s) 269, 305, 368, 668
GlaI GCGC 1 cut(s) 30
GluI GCNGC 4 cut(s) 161, 342, 665, 1036
HaeII RGCGCY 1 cut(s) 32
HaeIII GGCC 1 cut(s) 1085
HapII CCGG 1 cut(s) 139
HhaI GCGC 1 cut(s) 31
Hin1I GRCGYC 1 cut(s) 29
Hin1II CATG 9 cut(s) 215, 266, 341, 629, 642, 1095, 1174, 1250, 1270
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HincII GTYRAC 1 cut(s) 1521
HindII GTYRAC 1 cut(s) 1521
HindIII AAGCTT 2 cut(s) 1487, 1533
HinfI GANTC 8 cut(s) 89, 619, 635, 821, 878, 893, 1372, 1436
HpaII CCGG 1 cut(s) 139
HphI GGTGA 3 cut(s) 451, 878, 1407
Hpy166II GTNNAC 5 cut(s) 559, 689, 712, 851, 1521
Hpy188III TCNNGA 6 cut(s) 133, 223, 857, 1325, 1424, 1493
Hpy8I GTNNAC 5 cut(s) 559, 689, 712, 851, 1521
HpyAV CCTTC 5 cut(s) 72, 375, 748, 752, 1474
HpyCH4III ACNGT 4 cut(s) 608, 929, 1395, 1518
HpyCH4IV ACGT 1 cut(s) 167
HpyF10VI GCNNNNNNNGC 3 cut(s) 197, 664, 1124
HpyF3I CTNAG 4 cut(s) 201, 435, 464, 719
HpySE526I ACGT 1 cut(s) 167
Hsp92I GRCGYC 1 cut(s) 29
Hsp92II CATG 9 cut(s) 215, 266, 341, 629, 642, 1095, 1174, 1250, 1270
HspAI GCGC 1 cut(s) 29
KasI GGCGCC 1 cut(s) 28
Kzo9I GATC 6 cut(s) 208, 225, 328, 395, 610, 799
LguI GCTCTTC 1 cut(s) 308
LmnI GCTCC 1 cut(s) 157
Lsp1109I GCAGC 3 cut(s) 172, 328, 676
LweI GCATC 3 cut(s) 645, 651, 850
MaeI CTAG 4 cut(s) 269, 305, 368, 668
MaeII ACGT 1 cut(s) 167
MaeIII GTNAC 4 cut(s) 46, 90, 890, 929
MalI GATC 6 cut(s) 210, 227, 330, 397, 612, 801
MboI GATC 6 cut(s) 208, 225, 328, 395, 610, 799
MhlI GDGCHC 3 cut(s) 561, 912, 996
MluCI AATT 8 cut(s) 274, 288, 457, 521, 811, 938, 1261, 1333
Mly113I GGCGCC 1 cut(s) 29
MlyI GAGTC 3 cut(s) 98, 887, 1445
MmeI TCCRAC 2 cut(s) 186, 483
MroXI GAANNNNTTC 1 cut(s) 825
MseI TTAA 9 cut(s) 72, 105, 386, 537, 771, 834, 1059, 1283, 1552
MslI CAYNNNNRTG 1 cut(s) 216
MspCI CTTAAG 1 cut(s) 770
MspI CCGG 1 cut(s) 139
MwoI GCNNNNNNNGC 3 cut(s) 197, 664, 1124
NarI GGCGCC 1 cut(s) 29
NdeI CATATG 1 cut(s) 756
NdeII GATC 6 cut(s) 208, 225, 328, 395, 610, 799
NlaIII CATG 9 cut(s) 215, 266, 341, 629, 642, 1095, 1174, 1250, 1270
NlaIV GGNNCC 1 cut(s) 30
NmuCI GTSAC 3 cut(s) 90, 890, 929
NspI RCATGY 2 cut(s) 341, 1174
PaqCI CACCTGC 2 cut(s) 854, 934
PciSI GCTCTTC 1 cut(s) 308
PcsI WCGNNNNNNNCGW 1 cut(s) 1522
PdmI GAANNNNTTC 1 cut(s) 825
PfeI GAWTC 5 cut(s) 619, 635, 821, 878, 1372
PkrI GCNGC 4 cut(s) 162, 343, 666, 1037
PleI GAGTC 3 cut(s) 97, 887, 1444
PluTI GGCGCC 1 cut(s) 32
PpsI GAGTC 3 cut(s) 97, 887, 1444
PshAI GACNNNNGTC 1 cut(s) 1516
PsiI TTATAA 2 cut(s) 36, 99
Psp124BI GAGCTC 1 cut(s) 912
PspN4I GGNNCC 1 cut(s) 30
PspPI GGNCC 1 cut(s) 1083
PstI CTGCAG 2 cut(s) 46, 346
RsaI GTAC 4 cut(s) 246, 852, 1320, 1546
RsaNI GTAC 4 cut(s) 245, 851, 1319, 1545
RseI CAYNNNNRTG 1 cut(s) 216
SacI GAGCTC 1 cut(s) 912
SapI GCTCTTC 1 cut(s) 308
SaqAI TTAA 9 cut(s) 72, 105, 386, 537, 771, 834, 1059, 1283, 1552
SatI GCNGC 4 cut(s) 161, 342, 665, 1036
Sau3AI GATC 6 cut(s) 208, 225, 328, 395, 610, 799
Sau96I GGNCC 1 cut(s) 1083
SchI GAGTC 3 cut(s) 98, 887, 1445
SduI GDGCHC 3 cut(s) 561, 912, 996
SfaNI GCATC 3 cut(s) 645, 651, 850
SfcI CTRYAG 4 cut(s) 42, 114, 342, 957
SfoI GGCGCC 1 cut(s) 30
SmiMI CAYNNNNRTG 1 cut(s) 216
SmlI CTYRAG 3 cut(s) 194, 770, 855
SmoI CTYRAG 3 cut(s) 194, 770, 855
SpeI ACTAGT 1 cut(s) 304
Sse9I AATT 8 cut(s) 274, 288, 457, 521, 811, 938, 1261, 1333
SsiI CCGC 4 cut(s) 830, 1036, 1118, 1459
SspDI GGCGCC 1 cut(s) 28
SspMI CTAG 4 cut(s) 269, 305, 368, 668
SstI GAGCTC 1 cut(s) 912
StyI CCWWGG 1 cut(s) 794
TaaI ACNGT 4 cut(s) 608, 929, 1395, 1518
TaiI ACGT 1 cut(s) 170
TaqI TCGA 5 cut(s) 491, 613, 745, 906, 1390
TasI AATT 8 cut(s) 274, 288, 457, 521, 811, 938, 1261, 1333
TatI WGTACW 1 cut(s) 1318
TauI GCSGC 1 cut(s) 1038
TfiI GAWTC 5 cut(s) 619, 635, 821, 878, 1372
Tru1I TTAA 9 cut(s) 72, 105, 386, 537, 771, 834, 1059, 1283, 1552
Tru9I TTAA 9 cut(s) 72, 105, 386, 537, 771, 834, 1059, 1283, 1552
TscAI CASTG 5 cut(s) 186, 822, 895, 934, 1400
TseFI GTSAC 3 cut(s) 90, 890, 929
TseI GCWGC 3 cut(s) 160, 341, 664
Tsp45I GTSAC 3 cut(s) 90, 890, 929
TspGWI ACGGA 2 cut(s) 667, 1032
TspRI CASTG 5 cut(s) 186, 822, 895, 934, 1400
Vha464I CTTAAG 1 cut(s) 770
VneI GTGCAC 1 cut(s) 557
XagI CCTNNNNNAGG 1 cut(s) 434
XapI RAATTY 2 cut(s) 521, 811
XceI RCATGY 2 cut(s) 341, 1174
XcmI CCANNNNNNNNNTGG 1 cut(s) 1392
XmiI GTMKAC 1 cut(s) 688
XmnI GAANNNNTTC 1 cut(s) 825
XspI CTAG 4 cut(s) 269, 305, 368, 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.