Rh7DG244000

Methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
25158274 .. 25164802
6529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG244000.1

Sequence Viewer

Length: 1593 bp
ATGGGGTCTAAGCAGAATCCTCCAGGAAACAGAACAAGACGCACATTGTCTATATTTGTTGTGATTGCTCTGTGCTGTTTCTTCTACCTTCTTGGAGCATGGCAAAAGAGTGGTTTGGGCAAAGCAGATAAGATAGCATTCGAAGTACCCAAGCAGACTGAGTGCAATGTCTTTAGTACTAATTTGAACTTTGAAACGCATCACAATGACGTGGAGATAATCGAACGCTCTGAACCAAAGGCCAAGGAGTTCAAGCCTTGTGATCCTCAGTACAGGGATTATACTCCTTGCCAAGAGCAAGACCGAGCAATGAAGTTCCCAAGGGAAAATATGGTATACAGGGAAAGACATTGTCCCCCAGAAGAGGAAAAATTGCACTGTCTTATTCCAGCACCCAAAGGGTATATTACTCCATTTCCCTGGCCTAAAAGCCGTGACTATGCCCACTATGCTAATGTCCCTTATAAACACCTGGCAGTTGAGAAAGCTGTTCAGAACTGGGTAGAGTTTCAGGGTAATGTTTTTAAATTCCCAGGTGGAGGAACAATGTTCCCTCACGGTGCTGATGCATATATTGATGAACTTGCATCAGTTATTCCAATTGCAGATGGCTCTGTGAGAACAGCATTGGATACTGGATGTGGGGTTGCAAGCTGGGGTGCATACTTGCTGAAGAGAAATATATTAGCTATGTCATTTGCACCAAAGGACAATCATGAAGCACAAGTTCAGTTTGCATTGGAGCGAGGTGTGCCTGCAGTTATTGGTGTTCTTGGATCAATACGTCTTCCATACCCATCTAGGGCCTTTGATATGTCTCAGTGCTCTCGATGTCTGATTCCATGGGCTGCTAATGATGGGATGTACCTAAAAGAAGTTGACCGGGTCCTTAGACCTGGGGGATATTGGATCTTGTCTGGACCTCCAATTAATTGGAAGACTTACTACAAAACGTGGAAGAGGTCTAAGGAGGATGTCCAGGGAGAGCAAAGGAAGATTGAAGAACTAGCTGAAAGTCTGTGTTGGGAGAAAAAGTACGAGAAAGGAGATATTGCCATCTGGAAGAAGAAAGCTAATACGAAATCCTGCAAAAGAGAGTCTGTCAATATATGCCGAACAAAGGATGCTGATGATGTCTGGTACAAGAAAATGGACACATGCGTAACCCCTCCCAGTGCAAATGAAGTACCTGTGGGGCAGGTGAAGTTTCCTGCAAGGCTTTATGCAGTCCCTCCTCGAATAGCTAATGGATTAGTTGCAGGGGTGACAACTGAATCTTATCAAGAAGACATTAAACTTTGGAAAAAGCAAGTAAATTCGTACAAAAGAATCAACAAATTAATTGGCACTACAAGATATAGGAATGTGATGGATATGAATGCTGGCCTGGGAGGATTTGCAGCAGCCCTTGAATCACGGAAGTCTTGGGTTATGAATGTTGTACCCTCAATAGCAAAGAACACTTTAGGTGTTGTTTATGAGAGAGGTCTAATCGGCATATACCATGACTGGTGTGAAGGCTTCTCTACATATCCAAGGACATATGACCTTATTCATGCCAGTGGGGTGTTCAGCTTGTACAGGAATGAGTAA

Protein Analysis

530

Amino Acids

60.25

Weight (kDa)

9.01

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_29 PF03141 93 - 529 2.5e-199 Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11 PF08241 210 - 304 4.3e-06 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 465
AarI CACCTGC 1 cut(s) 1189
Acc36I ACCTGC 1 cut(s) 1189
AccI GTMKAC 1 cut(s) 336
AclWI GGATC 3 cut(s) 257, 784, 917
AcsI RAATTY 2 cut(s) 527, 1315
AcuI CTGAAG 1 cut(s) 692
AfiI CCNNNNNNNGG 4 cut(s) 364, 539, 802, 1120
AgsI TTSAA 5 cut(s) 187, 194, 253, 1001, 1412
AjiI CACGTC 1 cut(s) 211
AjnI CCWGG 7 cut(s) 22, 419, 471, 532, 895, 978, 1386
AluBI AGCT 7 cut(s) 488, 654, 689, 1010, 1073, 1244, 1575
AluI AGCT 7 cut(s) 488, 654, 689, 1010, 1073, 1244, 1575
Alw21I GWGCWC 1 cut(s) 827
Alw26I GTCTC 1 cut(s) 822
AlwI GGATC 3 cut(s) 257, 784, 917
AoxI GGCC 4 cut(s) 240, 422, 804, 1384
ApeKI GCWGC 3 cut(s) 848, 1400, 1403
ApoI RAATTY 2 cut(s) 527, 1315
AseI ATTAAT 2 cut(s) 930, 1340
AspS9I GGNCC 3 cut(s) 804, 886, 920
AsuC2I CCSGG 1 cut(s) 884
AsuHPI GGTGA 2 cut(s) 1213, 1276
AsuII TTCGAA 1 cut(s) 141
AvaII GGWCC 2 cut(s) 886, 920
BarI GAAGNNNNNNTAC 2 cut(s) 929, 961
BbsI GAAGAC 3 cut(s) 779, 944, 1293
Bbv12I GWGCWC 1 cut(s) 827
BbvI GCAGC 3 cut(s) 835, 1412, 1415
BccI CCATC 5 cut(s) 602, 805, 851, 1064, 1363
BceAI ACGGC 1 cut(s) 417
BciT130I CCWGG 7 cut(s) 24, 421, 473, 534, 897, 980, 1388
BciVI GTATCC 1 cut(s) 625
BcnI CCSGG 1 cut(s) 884
BcoDI GTCTC 1 cut(s) 822
BfaI CTAG 2 cut(s) 801, 1007
BfmI CTRYAG 1 cut(s) 756
BfuAI ACCTGC 1 cut(s) 1189
BfuI GTATCC 1 cut(s) 625
BisI GCNGC 3 cut(s) 849, 1401, 1404
BlsI GCNGC 3 cut(s) 850, 1402, 1405
BmcAI AGTACT 1 cut(s) 178
Bme1390I CCNGG 8 cut(s) 24, 421, 473, 534, 884, 897, 980, 1388
Bme18I GGWCC 2 cut(s) 886, 920
BmgBI CACGTC 1 cut(s) 211
BmgT120I GGNCC 3 cut(s) 804, 886, 920
BmiI GGNNCC 1 cut(s) 887
BmrFI CCNGG 8 cut(s) 24, 421, 473, 534, 884, 897, 980, 1388
BmrI ACTGGG 2 cut(s) 508, 1167
BmsI GCATC 4 cut(s) 208, 556, 596, 1114
BmuI ACTGGG 2 cut(s) 508, 1167
BpiI GAAGAC 3 cut(s) 779, 944, 1293
BpmI CTGGAG 1 cut(s) 6
Bpu14I TTCGAA 1 cut(s) 141
BpuMI CCSGG 1 cut(s) 884
BsaJI CCNNGG 9 cut(s) 243, 320, 419, 532, 842, 896, 979, 1387, 1535
BsaXI ACNNNNNCTCC 2 cut(s) 1019, 1049
Bsc4I CCNNNNNNNGG 4 cut(s) 364, 539, 802, 1120
Bse1I ACTGG 5 cut(s) 503, 640, 1173, 1514, 1560
Bse3DI GCAATG 2 cut(s) 172, 315
BseBI CCWGG 7 cut(s) 24, 421, 473, 534, 897, 980, 1388
BseDI CCNNGG 9 cut(s) 243, 320, 419, 532, 842, 896, 979, 1387, 1535
BseGI GGATG 4 cut(s) 644, 867, 979, 1129
BseLI CCNNNNNNNGG 4 cut(s) 364, 539, 802, 1120
BseMI GCAATG 2 cut(s) 172, 315
BseMII CTCAG 3 cut(s) 150, 281, 833
BseNI ACTGG 5 cut(s) 503, 640, 1173, 1514, 1560
BseRI GAGGAG 1 cut(s) 1224
BseXI GCAGC 3 cut(s) 835, 1412, 1415
BseYI CCCAGC 1 cut(s) 654
BshFI GGCC 4 cut(s) 242, 424, 806, 1386
BsiHKAI GWGCWC 1 cut(s) 827
BsiSI CCGG 1 cut(s) 883
BslFI GGGAC 3 cut(s) 339, 443, 1214
BslI CCNNNNNNNGG 4 cut(s) 364, 539, 802, 1120
BsmAI GTCTC 1 cut(s) 822
BsmFI GGGAC 3 cut(s) 339, 443, 1214
BsmI GAATGC 2 cut(s) 137, 1384
BsnI GGCC 4 cut(s) 242, 424, 806, 1386
Bsp119I TTCGAA 1 cut(s) 141
Bsp1286I GDGCHC 1 cut(s) 827
Bsp1407I TGTACA 1 cut(s) 1578
Bsp143I GATC 3 cut(s) 262, 776, 909
Bsp19I CCATGG 1 cut(s) 842
BspANI GGCC 4 cut(s) 242, 424, 806, 1386
BspCNI CTCAG 3 cut(s) 151, 280, 832
BspHI TCATGA 1 cut(s) 715
BspLI GGNNCC 1 cut(s) 887
BspMAI CTGCAG 1 cut(s) 760
BspMI ACCTGC 1 cut(s) 1189
BspPI GGATC 3 cut(s) 257, 784, 917
BspT104I TTCGAA 1 cut(s) 141
BsrDI GCAATG 2 cut(s) 172, 315
BsrGI TGTACA 1 cut(s) 1578
BsrI ACTGG 5 cut(s) 503, 640, 1173, 1514, 1560
BssECI CCNNGG 9 cut(s) 243, 320, 419, 532, 842, 896, 979, 1387, 1535
BssMI GATC 3 cut(s) 262, 776, 909
BssNAI GTATAC 1 cut(s) 337
BssT1I CCWWGG 4 cut(s) 243, 320, 842, 1535
Bst1107I GTATAC 1 cut(s) 337
Bst2UI CCWGG 7 cut(s) 24, 421, 473, 534, 897, 980, 1388
Bst4CI ACNGT 2 cut(s) 380, 560
Bst6I CTCTTC 3 cut(s) 357, 668, 953
BstAUI TGTACA 1 cut(s) 1578
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 3 cut(s) 652, 756, 1384
BstDEI CTNAG 6 cut(s) 9, 159, 267, 819, 890, 966
BstDSI CCRYGG 1 cut(s) 842
BstF5I GGATG 4 cut(s) 644, 867, 979, 1129
BstKTI GATC 3 cut(s) 265, 779, 912
BstMAI GTCTC 1 cut(s) 822
BstMBI GATC 3 cut(s) 262, 776, 909
BstMWI GCNNNNNNNGC 2 cut(s) 449, 751
BstNI CCWGG 7 cut(s) 24, 421, 473, 534, 897, 980, 1388
BstNSI RCATGY 1 cut(s) 1161
BstSCI CCNGG 8 cut(s) 22, 419, 471, 532, 882, 895, 978, 1386
BstSFI CTRYAG 1 cut(s) 756
BstV1I GCAGC 3 cut(s) 835, 1412, 1415
BstV2I GAAGAC 3 cut(s) 779, 944, 1293
BstX2I RGATCY 1 cut(s) 909
BstXI CCANNNNNNTGG 2 cut(s) 420, 933
BstYI RGATCY 1 cut(s) 909
BstZ17I GTATAC 1 cut(s) 337
BsuI GTATCC 1 cut(s) 625
BsuRI GGCC 4 cut(s) 242, 424, 806, 1386
BtgI CCRYGG 1 cut(s) 842
BtrI CACGTC 1 cut(s) 211
BtsCI GGATG 4 cut(s) 644, 867, 979, 1129
BtsIMutI CAGTG 4 cut(s) 376, 827, 1180, 1567
BveI ACCTGC 1 cut(s) 1189
Cac8I GCNNGC 3 cut(s) 652, 756, 1384
CciI TCATGA 1 cut(s) 715
Cfr13I GGNCC 3 cut(s) 804, 886, 920
CseI GACGC 1 cut(s) 48
CviAII CATG 6 cut(s) 99, 716, 843, 1158, 1505, 1556
DdeI CTNAG 6 cut(s) 9, 159, 267, 819, 890, 966
DpnI GATC 3 cut(s) 264, 778, 911
DpnII GATC 3 cut(s) 262, 776, 909
DraI TTTAAA 1 cut(s) 526
Eam1104I CTCTTC 3 cut(s) 357, 668, 953
EarI CTCTTC 3 cut(s) 357, 668, 953
Eco130I CCWWGG 4 cut(s) 243, 320, 842, 1535
Eco47I GGWCC 2 cut(s) 886, 920
Eco57I CTGAAG 1 cut(s) 692
EcoO109I RGGNCCY 2 cut(s) 804, 886
EcoRII CCWGG 7 cut(s) 22, 419, 471, 532, 895, 978, 1386
EcoT14I CCWWGG 4 cut(s) 243, 320, 842, 1535
EcoT22I ATGCAT 1 cut(s) 571
ErhI CCWWGG 4 cut(s) 243, 320, 842, 1535
FaeI CATG 6 cut(s) 102, 719, 846, 1161, 1508, 1559
FaqI GGGAC 3 cut(s) 339, 443, 1214
FatI CATG 6 cut(s) 98, 715, 842, 1157, 1504, 1555
FauNDI CATATG 1 cut(s) 1543
FblI GTMKAC 1 cut(s) 336
Fnu4HI GCNGC 3 cut(s) 849, 1401, 1404
FokI GGATG 4 cut(s) 651, 874, 986, 1136
Fsp4HI GCNGC 3 cut(s) 849, 1401, 1404
FspBI CTAG 2 cut(s) 801, 1007
GluI GCNGC 3 cut(s) 849, 1401, 1404
GsaI CCCAGC 1 cut(s) 658
GsuI CTGGAG 1 cut(s) 6
HaeIII GGCC 4 cut(s) 242, 424, 806, 1386
HapII CCGG 1 cut(s) 883
HgaI GACGC 1 cut(s) 48
Hin1II CATG 6 cut(s) 102, 719, 846, 1161, 1508, 1559
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HinfI GANTC 6 cut(s) 16, 838, 1097, 1274, 1329, 1412
HpaII CCGG 1 cut(s) 883
HphI GGTGA 2 cut(s) 1213, 1276
Hpy166II GTNNAC 2 cut(s) 337, 880
Hpy188I TCNGA 3 cut(s) 232, 495, 837
Hpy188III TCNNGA 5 cut(s) 716, 828, 918, 1060, 1283
Hpy8I GTNNAC 2 cut(s) 337, 880
HpyAV CCTTC 2 cut(s) 98, 1511
HpyCH4III ACNGT 2 cut(s) 380, 560
HpyCH4IV ACGT 3 cut(s) 210, 784, 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 449, 751
HpyF3I CTNAG 6 cut(s) 9, 159, 267, 819, 890, 966
HpySE526I ACGT 3 cut(s) 210, 784, 953
Hsp92II CATG 6 cut(s) 102, 719, 846, 1161, 1508, 1559
Kzo9I GATC 3 cut(s) 262, 776, 909
LmnI GCTCC 2 cut(s) 95, 742
Lsp1109I GCAGC 3 cut(s) 835, 1412, 1415
LweI GCATC 4 cut(s) 208, 556, 596, 1114
MaeI CTAG 2 cut(s) 801, 1007
MaeII ACGT 3 cut(s) 210, 784, 953
MaeIII GTNAC 3 cut(s) 434, 1162, 1264
MalI GATC 3 cut(s) 264, 778, 911
MboI GATC 3 cut(s) 262, 776, 909
MfeI CAATTG 1 cut(s) 600
MflI RGATCY 1 cut(s) 909
MhlI GDGCHC 1 cut(s) 827
MluCI AATT 9 cut(s) 181, 371, 527, 600, 927, 931, 1315, 1337, 1341
MlyI GAGTC 1 cut(s) 1106
Mph1103I ATGCAT 1 cut(s) 571
MseI TTAA 4 cut(s) 525, 930, 1293, 1340
MslI CAYNNNNRTG 2 cut(s) 204, 1560
MspI CCGG 1 cut(s) 883
MspR9I CCNGG 8 cut(s) 24, 421, 473, 534, 884, 897, 980, 1388
MunI CAATTG 1 cut(s) 600
Mva1269I GAATGC 2 cut(s) 137, 1384
MvaI CCWGG 7 cut(s) 24, 421, 473, 534, 897, 980, 1388
MwoI GCNNNNNNNGC 2 cut(s) 449, 751
NciI CCSGG 1 cut(s) 884
NcoI CCATGG 1 cut(s) 842
NdeI CATATG 1 cut(s) 1543
NdeII GATC 3 cut(s) 262, 776, 909
NlaIII CATG 6 cut(s) 102, 719, 846, 1161, 1508, 1559
NlaIV GGNNCC 1 cut(s) 887
NmuCI GTSAC 2 cut(s) 434, 1264
NsiI ATGCAT 1 cut(s) 571
NspI RCATGY 1 cut(s) 1161
NspV TTCGAA 1 cut(s) 141
PagI TCATGA 1 cut(s) 715
PaqCI CACCTGC 1 cut(s) 1189
PctI GAATGC 2 cut(s) 137, 1384
PfeI GAWTC 5 cut(s) 16, 838, 1274, 1329, 1412
PflFI GACNNNGTC 2 cut(s) 351, 884
PfoI TCCNGGA 1 cut(s) 22
PkrI GCNGC 3 cut(s) 850, 1402, 1405
PleI GAGTC 1 cut(s) 1105
PpsI GAGTC 1 cut(s) 1105
PpuMI RGGWCCY 1 cut(s) 886
PshBI ATTAAT 2 cut(s) 930, 1340
PsiI TTATAA 1 cut(s) 465
Psp5II RGGWCCY 1 cut(s) 886
Psp6I CCWGG 7 cut(s) 22, 419, 471, 532, 895, 978, 1386
PspFI CCCAGC 1 cut(s) 654
PspGI CCWGG 7 cut(s) 22, 419, 471, 532, 895, 978, 1386
PspN4I GGNNCC 1 cut(s) 887
PspPI GGNCC 3 cut(s) 804, 886, 920
PspPPI RGGWCCY 1 cut(s) 886
PstI CTGCAG 1 cut(s) 760
PsuI RGATCY 1 cut(s) 909
PsyI GACNNNGTC 2 cut(s) 351, 884
RseI CAYNNNNRTG 2 cut(s) 204, 1560
SaqAI TTAA 4 cut(s) 525, 930, 1293, 1340
SatI GCNGC 3 cut(s) 849, 1401, 1404
Sau3AI GATC 3 cut(s) 262, 776, 909
Sau96I GGNCC 3 cut(s) 804, 886, 920
ScaI AGTACT 1 cut(s) 178
SchI GAGTC 1 cut(s) 1106
ScrFI CCNGG 8 cut(s) 24, 421, 473, 534, 884, 897, 980, 1388
SduI GDGCHC 1 cut(s) 827
SfaNI GCATC 4 cut(s) 208, 556, 596, 1114
SfcI CTRYAG 1 cut(s) 756
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 2 cut(s) 886, 920
SmiMI CAYNNNNRTG 2 cut(s) 204, 1560
Sse9I AATT 9 cut(s) 181, 371, 527, 600, 927, 931, 1315, 1337, 1341
SspMI CTAG 2 cut(s) 801, 1007
StyD4I CCNGG 8 cut(s) 22, 419, 471, 532, 882, 895, 978, 1386
StyI CCWWGG 4 cut(s) 243, 320, 842, 1535
TaaI ACNGT 2 cut(s) 380, 560
TaiI ACGT 3 cut(s) 213, 787, 956
TaqI TCGA 4 cut(s) 141, 222, 829, 1237
TaqII GACCGA 1 cut(s) 318
TasI AATT 9 cut(s) 181, 371, 527, 600, 927, 931, 1315, 1337, 1341
TatI WGTACW 3 cut(s) 176, 270, 1578
TfiI GAWTC 5 cut(s) 16, 838, 1274, 1329, 1412
Tru1I TTAA 4 cut(s) 525, 930, 1293, 1340
Tru9I TTAA 4 cut(s) 525, 930, 1293, 1340
TscAI CASTG 4 cut(s) 383, 827, 1180, 1567
TseFI GTSAC 2 cut(s) 434, 1264
TseI GCWGC 3 cut(s) 848, 1400, 1403
Tsp45I GTSAC 2 cut(s) 434, 1264
TspDTI ATGAA 7 cut(s) 326, 594, 732, 1197, 1391, 1448, 1544
TspGWI ACGGA 1 cut(s) 1432
TspRI CASTG 4 cut(s) 383, 827, 1180, 1567
Tth111I GACNNNGTC 2 cut(s) 351, 884
VpaK11BI GGWCC 2 cut(s) 886, 920
VspI ATTAAT 2 cut(s) 930, 1340
XapI RAATTY 2 cut(s) 527, 1315
XceI RCATGY 1 cut(s) 1161
XmiI GTMKAC 1 cut(s) 336
XspI CTAG 2 cut(s) 801, 1007
ZrmI AGTACT 1 cut(s) 178
Zsp2I ATGCAT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.