Rw0G007190

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00270
OG0016835
Physical Location & Seq
Reverse (-)
75746 .. 77450
1705 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G007190.1

Sequence Viewer

Length: 1560 bp
ATGTCATATAGTAGCAGCAGCACTAGATGCCTCCAACTGTTGGAGAAGTGCAAGAACCTAAAGCACCTCCACCAAGCTCATGCCCAAGTATTCACTTGTGGCCTTGCCCACAACACCTTTGCCTTGAGCAGACTCTTAGCCTTCTGCTCAGACCCACATCATGGAAGCCTCTCCTATGCCTCAAAACTCTTCCAACACATTCCCCAACCCACCCTTTGCATCTACAACACAATGTTAAAAGCTCTCCTGCTCAGAAATGAACTCACCCAAACCCTAAATGTGTTCACCCAGATGTTACAAAACGGGACTTACCCTGACAGTTATACCCTCCCTTATGTTCTAAAGGCCTCTGCCAGGCTTCAAGGCTATACTCTAGGAGAGTTGGTTCATGGGTTTAGCTTGAAATTGGGTTTTGAGGCTGATATCTATGTGGGCAACTCTCTGATTGTTATGTACTGTGCATTTGATAATATGAAAGGTGCACGCTACGTGTTCGACGAAATGCCTAGGCTAAGTGCTGTGTCATGGACGGTCATGATTTCTGGGTATGCAAAGGTGGGTGATGTGGACACTGCTAGAGTGTTCTTTGATGAGGCTCCTGTGAGAGATAGAGGAATATGGGGTGCCATGATTTCTGGGTATGTGCAAAACAATTGCTTTAAAGAAGGTCTGTATTTGTTCCGGTTGATGCAGGTTGCTGATGTAGAGCCTGATGAGGCTGTTTTTGTTAGTGTTCTATGTGCTTGTGCTCATTTGGGAGATTTGGATATTGGGATTTGGATTCACTCGTATTTGAATCGGCTCGGGTTGCCATTGAGTGTTAGACTCGGCACTGGTCTTATTGACATGTATGCGAAATGTGGGAAATTGGACTTAGCTAGAGGAGTGTTTTATGAGATGCCGCAGAGGGATACGGTTTGCTGGAATGCTATGATATCAGGAACGGCAATGCATGGAGATGGAGAAGGTGCACTCGAGCTGTTTAGAGAGATGGAGGCAGCTCAGGTCAGGCCGGATGATATCACCTTCATTGCTGTGGTGTTGGATAAAATGTGTAATGTATACAATATTAGGCCAAAAAGTGAACACTATGGCTGCATTGTTGACCTTCTAAGTCGTGCTGGTCTCTTTGAAGAAGCCAGGGAAATAATCGAAAGAATACCCAGTTCAAGTAACCCTTCTGAAGAAGCAGTAGCTTGGAGAGCTTTTCTCAGCGCTTGTTGCAATCATGGACAGTCTCAACTAGCTGAGAGTGCTGCAGAGAAACTCTTTCAGCTAGAACGTCACAGTGGCGTGTATGTCTTGCTCTCAAATTTATATGCAGCTGCCGGAAAGCATGGTGATGCCAGGAGAATGAGAAGTTTGATGAGAAATATAGGAGTAGATAAGGCCCCGGGTTGCAGTTCGGTCGAGATTGATAGAGCTGTTTATGAATTCATTGCAGGGGAGAAAACACACCCTCAAATGGAAGAAATTCAGTTAGTTTTGCAAACTATAATGAAGCAAATGGATTTTTCAGGCAGTGATTATCCATATTTGTTTCTGGTTAACAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

519

Amino Acids

58.04

Weight (kDa)

6.16

Isoelectric Point (pI)

32.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 70 - 116 1.2e-06 PPR repeat family
PPR_2 PF13041 303 - 344 1.5e-09 PPR repeat family
PPR PF01535 306 - 333 1.6e-06 PPR repeat
E_motif PF20431 412 - 471 3.2e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016835)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g30430
malus_domestica MD16G1063600.v1.1
prunus_persica Prupe.1G282900_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0438721
rosa_laevigata RLG00000006334
rosa_multiflora Rmu_sc0000144.1_g000047 Rmu_sc0002505.1_g000006
rosa_roxburghii Rroxscaffold_5G00379760
rosa_rugosa Rorug04G0312800
rosa_samantha Rh4AG363400 Rh4BG374800 Rh4CG389000
rosa_wichuraiana Rw0G007190 Rw0G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 623
AccB7I CCANNNNNTGG 2 cut(s) 40, 161
AccI GTMKAC 1 cut(s) 1062
AciI CCGC 1 cut(s) 902
AcsI RAATTY 3 cut(s) 1312, 1433, 1473
AcuI CTGAAG 1 cut(s) 1203
AfaI GTAC 1 cut(s) 455
AfeI AGCGCT 1 cut(s) 1216
AfiI CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1465
AflIII ACRYGT 2 cut(s) 489, 846
AgsI TTSAA 5 cut(s) 362, 403, 796, 1133, 1170
AjnI CCWGG 3 cut(s) 353, 1139, 1346
AloI GAACNNNNNNTCC 2 cut(s) 369, 401
Alw21I GWGCWC 3 cut(s) 484, 751, 973
Alw26I GTCTC 2 cut(s) 1130, 1242
Alw44I GTGCAC 2 cut(s) 480, 969
Ama87I CYCGRG 3 cut(s) 803, 974, 1393
Aor51HI AGCGCT 1 cut(s) 1216
AoxI GGCC 5 cut(s) 100, 345, 1010, 1073, 1389
ApaLI GTGCAC 2 cut(s) 480, 969
ApeKI GCWGC 7 cut(s) 15, 18, 998, 1095, 1256, 1322, 1325
ApoI RAATTY 3 cut(s) 1312, 1433, 1473
Asp700I GAANNNNTTC 1 cut(s) 1473
AspA2I CCTAGG 1 cut(s) 506
AspLEI GCGC 1 cut(s) 1217
AspS9I GGNCC 1 cut(s) 1390
AsuC2I CCSGG 2 cut(s) 1394, 1395
AsuHPI GGTGA 5 cut(s) 256, 277, 572, 1015, 1352
AvaI CYCGRG 3 cut(s) 803, 974, 1393
AvrII CCTAGG 1 cut(s) 506
BaeGI GKGCMC 2 cut(s) 484, 973
BanI GGYRCC 1 cut(s) 623
Bbv12I GWGCWC 3 cut(s) 484, 751, 973
BbvI GCAGC 7 cut(s) 27, 30, 1010, 1082, 1243, 1312, 1334
BccI CCATC 2 cut(s) 953, 985
BceAI ACGGC 1 cut(s) 960
BcgI CGANNNNNNTGC 2 cut(s) 1390, 1424
BciT130I CCWGG 3 cut(s) 355, 1141, 1348
BciVI GTATCC 1 cut(s) 904
BcnI CCSGG 2 cut(s) 1394, 1395
BcoDI GTCTC 2 cut(s) 1130, 1242
BfaI CTAG 7 cut(s) 24, 374, 507, 576, 879, 1244, 1277
BfmI CTRYAG 1 cut(s) 1257
BfoI RGCGCY 1 cut(s) 1218
BfuAI ACCTGC 1 cut(s) 682
BfuI GTATCC 1 cut(s) 904
BisI GCNGC 8 cut(s) 16, 19, 902, 999, 1096, 1257, 1323, 1326
BlnI CCTAGG 1 cut(s) 506
BlsI GCNGC 8 cut(s) 17, 20, 903, 1000, 1097, 1258, 1324, 1327
Bme1390I CCNGG 5 cut(s) 355, 1141, 1348, 1394, 1395
BmeT110I CYCGRG 3 cut(s) 803, 974, 1393
BmgT120I GGNCC 1 cut(s) 1390
BmiI GGNNCC 3 cut(s) 597, 625, 1392
BmrFI CCNGG 5 cut(s) 355, 1141, 1348, 1394, 1395
BmrI ACTGGG 1 cut(s) 1158
BmsI GCATC 5 cut(s) 17, 228, 678, 888, 1333
BmuI ACTGGG 1 cut(s) 1158
BplI GAGNNNNNCTC 2 cut(s) 1194, 1226
Bpu10I CCTNAGC 1 cut(s) 1002
BpuEI CTTGAG 1 cut(s) 145
BpuMI CCSGG 2 cut(s) 1394, 1395
BsaAI YACGTR 1 cut(s) 490
BsaI GGTCTC 1 cut(s) 1130
BsaJI CCNNGG 4 cut(s) 506, 1140, 1392, 1393
BsaWI WCCGGW 1 cut(s) 681
BsaXI ACNNNNNCTCC 2 cut(s) 369, 399
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1465
Bse1I ACTGG 2 cut(s) 838, 1164
Bse3DI GCAATG 3 cut(s) 954, 1029, 1437
BseBI CCWGG 3 cut(s) 355, 1141, 1348
BseDI CCNNGG 4 cut(s) 506, 1140, 1392, 1393
BseGI GGATG 1 cut(s) 1021
BseLI CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1465
BseMI GCAATG 3 cut(s) 954, 1029, 1437
BseMII CTCAG 5 cut(s) 162, 265, 1016, 1225, 1239
BseNI ACTGG 2 cut(s) 838, 1164
BseRI GAGGAG 1 cut(s) 897
BseSI GKGCMC 2 cut(s) 484, 973
BseXI GCAGC 7 cut(s) 27, 30, 1010, 1082, 1243, 1312, 1334
Bsh1285I CGRYCG 1 cut(s) 1410
BshFI GGCC 5 cut(s) 102, 347, 1012, 1075, 1391
BshNI GGYRCC 1 cut(s) 623
BsiEI CGRYCG 1 cut(s) 1410
BsiHKAI GWGCWC 3 cut(s) 484, 751, 973
BsiHKCI CYCGRG 3 cut(s) 803, 974, 1393
BsiSI CCGG 4 cut(s) 682, 1013, 1329, 1394
BslFI GGGAC 1 cut(s) 319
BslI CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1465
BsmAI GTCTC 2 cut(s) 1130, 1242
BsmFI GGGAC 1 cut(s) 319
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 5 cut(s) 102, 347, 1012, 1075, 1391
Bso31I GGTCTC 1 cut(s) 1130
BsoBI CYCGRG 3 cut(s) 803, 974, 1393
Bsp1286I GDGCHC 3 cut(s) 484, 751, 973
BspACI CCGC 1 cut(s) 902
BspANI GGCC 5 cut(s) 102, 347, 1012, 1075, 1391
BspCNI CTCAG 5 cut(s) 161, 264, 1015, 1224, 1240
BspHI TCATGA 1 cut(s) 534
BspLI GGNNCC 3 cut(s) 597, 625, 1392
BspMAI CTGCAG 1 cut(s) 1261
BspMI ACCTGC 1 cut(s) 682
BspT107I GGYRCC 1 cut(s) 623
BspTNI GGTCTC 1 cut(s) 1130
BsrDI GCAATG 3 cut(s) 954, 1029, 1437
BsrI ACTGG 2 cut(s) 838, 1164
BssECI CCNNGG 4 cut(s) 506, 1140, 1392, 1393
BssNAI GTATAC 1 cut(s) 1063
BssT1I CCWWGG 1 cut(s) 506
Bst1107I GTATAC 1 cut(s) 1063
Bst2UI CCWGG 3 cut(s) 355, 1141, 1348
Bst4CI ACNGT 7 cut(s) 39, 320, 458, 532, 916, 1236, 1289
Bst6I CTCTTC 1 cut(s) 194
BstAPI GCANNNNNTGC 1 cut(s) 27
BstBAI YACGTR 1 cut(s) 490
BstC8I GCNNGC 1 cut(s) 484
BstDEI CTNAG 9 cut(s) 136, 148, 251, 512, 874, 1002, 1112, 1211, 1248
BstENI CCTNNNNNAGG 1 cut(s) 352
BstF5I GGATG 1 cut(s) 1021
BstH2I RGCGCY 1 cut(s) 1218
BstHHI GCGC 1 cut(s) 1217
BstMAI GTCTC 2 cut(s) 1130, 1242
BstMCI CGRYCG 1 cut(s) 1410
BstMWI GCNNNNNNNGC 5 cut(s) 27, 808, 1202, 1221, 1253
BstNI CCWGG 3 cut(s) 355, 1141, 1348
BstNSI RCATGY 1 cut(s) 850
BstSCI CCNGG 5 cut(s) 353, 1139, 1346, 1392, 1393
BstSFI CTRYAG 1 cut(s) 1257
BstSLI GKGCMC 2 cut(s) 484, 973
BstV1I GCAGC 7 cut(s) 27, 30, 1010, 1082, 1243, 1312, 1334
BstZ17I GTATAC 1 cut(s) 1063
BsuI GTATCC 1 cut(s) 904
BsuRI GGCC 5 cut(s) 102, 347, 1012, 1075, 1391
BtsCI GGATG 1 cut(s) 1021
BtsI GCAGTG 2 cut(s) 570, 1528
BtsIMutI CAGTG 4 cut(s) 570, 831, 1294, 1528
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 1 cut(s) 484
CciI TCATGA 1 cut(s) 534
CfoI GCGC 1 cut(s) 1217
Cfr13I GGNCC 1 cut(s) 1390
Cfr9I CCCGGG 1 cut(s) 1393
Csp6I GTAC 1 cut(s) 454
CviQI GTAC 1 cut(s) 454
DdeI CTNAG 9 cut(s) 136, 148, 251, 512, 874, 1002, 1112, 1211, 1248
DraI TTTAAA 1 cut(s) 661
Eam1104I CTCTTC 1 cut(s) 194
EarI CTCTTC 1 cut(s) 194
Eco130I CCWWGG 1 cut(s) 506
Eco147I AGGCCT 1 cut(s) 347
Eco31I GGTCTC 1 cut(s) 1130
Eco32I GATATC 3 cut(s) 424, 936, 1021
Eco47III AGCGCT 1 cut(s) 1216
Eco57I CTGAAG 1 cut(s) 1203
Eco88I CYCGRG 3 cut(s) 803, 974, 1393
EcoNI CCTNNNNNAGG 1 cut(s) 352
EcoO109I RGGNCCY 1 cut(s) 1390
EcoRI GAATTC 1 cut(s) 1433
EcoRII CCWGG 3 cut(s) 353, 1139, 1346
EcoRV GATATC 3 cut(s) 424, 936, 1021
EcoT14I CCWWGG 1 cut(s) 506
EcoT22I ATGCAT 1 cut(s) 954
ErhI CCWWGG 1 cut(s) 506
FalI AAGNNNNNCTT 2 cut(s) 1162, 1194
FaqI GGGAC 1 cut(s) 319
FblI GTMKAC 1 cut(s) 1062
Fnu4HI GCNGC 8 cut(s) 16, 19, 902, 999, 1096, 1257, 1323, 1326
FokI GGATG 1 cut(s) 1028
Fsp4HI GCNGC 8 cut(s) 16, 19, 902, 999, 1096, 1257, 1323, 1326
FspBI CTAG 7 cut(s) 24, 374, 507, 576, 879, 1244, 1277
GlaI GCGC 1 cut(s) 1216
GluI GCNGC 8 cut(s) 16, 19, 902, 999, 1096, 1257, 1323, 1326
HaeII RGCGCY 1 cut(s) 1218
HaeIII GGCC 5 cut(s) 102, 347, 1012, 1075, 1391
HapII CCGG 4 cut(s) 682, 1013, 1329, 1394
HhaI GCGC 1 cut(s) 1217
Hin6I GCGC 1 cut(s) 1215
HinP1I GCGC 1 cut(s) 1215
HincII GTYRAC 2 cut(s) 1105, 1549
HindII GTYRAC 2 cut(s) 1105, 1549
HinfI GANTC 4 cut(s) 132, 781, 796, 825
HpaI GTTAAC 1 cut(s) 1549
HpaII CCGG 4 cut(s) 682, 1013, 1329, 1394
HphI GGTGA 5 cut(s) 256, 277, 572, 1015, 1352
Hpy166II GTNNAC 8 cut(s) 285, 482, 568, 971, 1063, 1085, 1105, 1549
Hpy188I TCNGA 4 cut(s) 151, 254, 444, 1183
Hpy188III TCNNGA 3 cut(s) 535, 939, 1411
Hpy8I GTNNAC 8 cut(s) 285, 482, 568, 971, 1063, 1085, 1105, 1549
Hpy99I CGWCG 1 cut(s) 500
HpyAV CCTTC 6 cut(s) 151, 659, 959, 1036, 1118, 1188
HpyCH4III ACNGT 7 cut(s) 39, 320, 458, 532, 916, 1236, 1289
HpyCH4IV ACGT 2 cut(s) 489, 1282
HpyF10VI GCNNNNNNNGC 5 cut(s) 27, 808, 1202, 1221, 1253
HpyF3I CTNAG 9 cut(s) 136, 148, 251, 512, 874, 1002, 1112, 1211, 1248
HpySE526I ACGT 2 cut(s) 489, 1282
HspAI GCGC 1 cut(s) 1215
KspAI GTTAAC 1 cut(s) 1549
LmnI GCTCC 1 cut(s) 601
Lsp1109I GCAGC 7 cut(s) 27, 30, 1010, 1082, 1243, 1312, 1334
LweI GCATC 5 cut(s) 17, 228, 678, 888, 1333
MaeI CTAG 7 cut(s) 24, 374, 507, 576, 879, 1244, 1277
MaeII ACGT 2 cut(s) 489, 1282
MaeIII GTNAC 3 cut(s) 294, 1172, 1283
MboII GAAGA 4 cut(s) 181, 1145, 1196, 1481
MfeI CAATTG 1 cut(s) 652
MhlI GDGCHC 3 cut(s) 484, 751, 973
MluCI AATT 6 cut(s) 404, 652, 866, 1312, 1433, 1473
MlyI GAGTC 2 cut(s) 126, 819
MmeI TCCRAC 4 cut(s) 21, 58, 217, 1023
Mph1103I ATGCAT 1 cut(s) 954
MroXI GAANNNNTTC 1 cut(s) 1473
MseI TTAA 3 cut(s) 236, 660, 1548
MslI CAYNNNNRTG 4 cut(s) 290, 957, 1034, 1341
MspA1I CMGCKG 1 cut(s) 1325
MspI CCGG 4 cut(s) 682, 1013, 1329, 1394
MspR9I CCNGG 5 cut(s) 355, 1141, 1348, 1394, 1395
MunI CAATTG 1 cut(s) 652
Mva1269I GAATGC 1 cut(s) 931
MvaI CCWGG 3 cut(s) 355, 1141, 1348
MwoI GCNNNNNNNGC 5 cut(s) 27, 808, 1202, 1221, 1253
NciI CCSGG 2 cut(s) 1394, 1395
NlaIV GGNNCC 3 cut(s) 597, 625, 1392
NmeAIII GCCGAG 1 cut(s) 807
NmuCI GTSAC 1 cut(s) 1283
NsiI ATGCAT 1 cut(s) 954
NspI RCATGY 1 cut(s) 850
PaeR7I CTCGAG 1 cut(s) 974
PagI TCATGA 1 cut(s) 534
PceI AGGCCT 1 cut(s) 347
PciI ACATGT 1 cut(s) 846
PcsI WCGNNNNNNNCGW 1 cut(s) 495
PctI GAATGC 1 cut(s) 931
PdmI GAANNNNTTC 1 cut(s) 1473
PfeI GAWTC 2 cut(s) 781, 796
PflMI CCANNNNNTGG 2 cut(s) 40, 161
PkrI GCNGC 8 cut(s) 17, 20, 903, 1000, 1097, 1258, 1324, 1327
PleI GAGTC 2 cut(s) 126, 819
PpsI GAGTC 2 cut(s) 126, 819
Ppu21I YACGTR 1 cut(s) 490
PscI ACATGT 1 cut(s) 846
Psp6I CCWGG 3 cut(s) 353, 1139, 1346
PspGI CCWGG 3 cut(s) 353, 1139, 1346
PspN4I GGNNCC 3 cut(s) 597, 625, 1392
PspPI GGNCC 1 cut(s) 1390
PspXI VCTCGAGB 1 cut(s) 974
PstI CTGCAG 1 cut(s) 1261
PvuII CAGCTG 1 cut(s) 1325
RsaI GTAC 1 cut(s) 455
RsaNI GTAC 1 cut(s) 454
RseI CAYNNNNRTG 4 cut(s) 290, 957, 1034, 1341
SaqAI TTAA 3 cut(s) 236, 660, 1548
SatI GCNGC 8 cut(s) 16, 19, 902, 999, 1096, 1257, 1323, 1326
Sau96I GGNCC 1 cut(s) 1390
SchI GAGTC 2 cut(s) 126, 819
ScrFI CCNGG 5 cut(s) 355, 1141, 1348, 1394, 1395
SduI GDGCHC 3 cut(s) 484, 751, 973
SfaNI GCATC 5 cut(s) 17, 228, 678, 888, 1333
SfcI CTRYAG 1 cut(s) 1257
Sfr274I CTCGAG 1 cut(s) 974
SlaI CTCGAG 1 cut(s) 974
SmaI CCCGGG 1 cut(s) 1395
SmiMI CAYNNNNRTG 4 cut(s) 290, 957, 1034, 1341
SmlI CTYRAG 2 cut(s) 124, 974
SmoI CTYRAG 2 cut(s) 124, 974
Sse9I AATT 6 cut(s) 404, 652, 866, 1312, 1433, 1473
SseBI AGGCCT 1 cut(s) 347
SsiI CCGC 1 cut(s) 902
SspI AATATT 1 cut(s) 1069
SspMI CTAG 7 cut(s) 24, 374, 507, 576, 879, 1244, 1277
StuI AGGCCT 1 cut(s) 347
StyD4I CCNGG 5 cut(s) 353, 1139, 1346, 1392, 1393
StyI CCWWGG 1 cut(s) 506
TaaI ACNGT 7 cut(s) 39, 320, 458, 532, 916, 1236, 1289
TaiI ACGT 2 cut(s) 492, 1285
TaqI TCGA 4 cut(s) 495, 975, 1152, 1410
TaqII GACCGA 1 cut(s) 1396
TasI AATT 6 cut(s) 404, 652, 866, 1312, 1433, 1473
TatI WGTACW 1 cut(s) 453
TauI GCSGC 1 cut(s) 904
TfiI GAWTC 2 cut(s) 781, 796
Tru1I TTAA 3 cut(s) 236, 660, 1548
Tru9I TTAA 3 cut(s) 236, 660, 1548
TscAI CASTG 4 cut(s) 577, 838, 1294, 1528
TseFI GTSAC 1 cut(s) 1283
TseI GCWGC 7 cut(s) 15, 18, 998, 1095, 1256, 1322, 1325
Tsp45I GTSAC 1 cut(s) 1283
TspDTI ATGAA 7 cut(s) 273, 377, 488, 1018, 1426, 1446, 1514
TspMI CCCGGG 1 cut(s) 1393
TspRI CASTG 4 cut(s) 577, 838, 1294, 1528
Van91I CCANNNNNTGG 2 cut(s) 40, 161
VneI GTGCAC 2 cut(s) 480, 969
XagI CCTNNNNNAGG 1 cut(s) 352
XapI RAATTY 3 cut(s) 1312, 1433, 1473
XceI RCATGY 1 cut(s) 850
XhoI CTCGAG 1 cut(s) 974
XmaI CCCGGG 1 cut(s) 1393
XmaJI CCTAGG 1 cut(s) 506
XmiI GTMKAC 1 cut(s) 1062
XmnI GAANNNNTTC 1 cut(s) 1473
XspI CTAG 7 cut(s) 24, 374, 507, 576, 879, 1244, 1277
Zsp2I ATGCAT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.