Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0014788

Physical Location & Seq

Genomic Coordinates Forward (+)

17019880 .. 17024266

Gene Structure 4387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G007930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGACAGGAGAAGCTCAGAAAATAGTGGTGATCCAGGATGCATCTAAAGACATCGTTAGTTCGAGCACAATTCAATTAGTCCTGCATGGCTTATCACATAAGCCTGGGGATGAACTTACACTTCTTGCAGTTCTTCACCAGGTTAATAACCCTAGTACGTTATCTCTCATGAAAGCTGGGAGACTGTTGGGATACAGGAACAAAATGGATTCCAGTTCATTTTTTGGAACAAACCAGAAAGTCATTCAAGAAGAGATTGAGAGGAAAACGGAGGAGTATCGTAACAAAGTGGAAATTACAATGATTTCTCAGATATGTGAATGCGCAGAGATTAAGTTCCACATGGAAGTACTCGCTGGCCCATCTCCAAAGATGGTTGCTGCAGATGCTGCCAAAGGATTAGGAGCAACGTGGGTTATTCTTGATAGGCAAATGAAGAAAGACAAGCAATTCTTCATGGAGAATTTGACATGTGGTATATCGAGGATGAAGCGTAACAACTCTGTTGAACAACTGAGAGGCCCAAAACCAATTGAGAACAGCAAGCCAGCAGCTGAAAGGCGCACCACCAGGAGACGTATCAAAGAACAAGTAAAATATGATGAAATGATACCTGGAGATGAAGAACTCTCTCCTAAAAAAACTCCAAGTCTTCCAAATATCAGTAATGGCAAAGAACAAGATGCTGATGTTTGCGGACACCCATGGCCTAATTATGGGAAATCTGCTTCCTCATCAAATGAGCAGCCGACAACTTCAAGCCTTGGGACTACTGAAGCCTTACCTTCTGTTCTTGCTGGTCATTTTCAAGAGGTAGAAATCACTACAAATACTGGAAGAGGAAAAGCAGAAGTCCCTCCTCCAATTGCAAGGGTTCAAGCGAGGGATCAAAAGGAAAGGGGGAGCCCAGATGAATCTAAACAGCACAGCTACAAGAATGATTGGATAGGAGAATGTCAAGCAGATGAGGAATTTAAAAATTCAACCTGCACAGTTTGCAATAATCAACGACCAAAGATCGGATGGAAGAGAGACTTTACTTATGCAGAACTCCAAGCTGCTACTGATGGTTTTTCCGCAAAGAACTTCCTATCTGAAGGTGGATTTGGTTCAGTCTACAAAGGAGAACTGAATGGGGTGAAGATTGCTGTAAAGCAACATAAAAATGCAAGCTTCCAAGGAGAGAAAGAATTTAAGTCTGAAGTTCATGTACTCAGCAAAGCAAGACATGAAAATTTGGTTATGCTGTTAGGATCATGTTCAGAAGGAAGACAGAGGCTCCTTGTTTACGAATATGTTTGCAACGGTTCTTTGGATCAACATTTATCAACACATAACACCAGGCCTCTCAGTTGGGAGAAGAAGATAAAAATCGCTACTGGAGCTGCAAAAGGGTTAAAATATCTGCATGAGAACAACATCATCCATAGGGACGTGAGACCAAACAACGTCCTCGTGTCACATGATTATGAATCCCTGCTAGGAGATTTTGGTCTTGCAAGAACTCAACATGAAGACTCGGATCGATCAACAGACACAACAAGAGTTGTCGGAACTTTGGGATATTTGGCACCAGAATATGCAGAAAGTGGGAAAGTGTCAACCAAGACAGATGTTTATGCTTTCGGGGTCATTCTATTACAGCTTATCACAGGAATGAGGCCTACAGACAAGAAGCTTGGAGGGAAAAGTCTTGTGGGATGGGCAAGACCACTATTGAAAGAAAGGAATTACCCAGATTTAATCGACCCAAGGAATGTAGATGCGCATGATGTGCATCAACTCTATTGGATGGTTCGGGTAGCAGAAAAATGTCTCACCAGGGATCCTTACAAGAGATTAACTATGGATAAGGTAGTTTATGCTTTAGATTACCTGAATGAAGCCAACCAAAATTGTATCATTGGAGACTTCTCCCCAGCACATTCTGAATCTGCTGGAAGCAGACTGGGCTCTTCTGAATCACACGGTGGACAAGGTGACAATTACATTAGTATAGACATTACTCCAGAAGGAGGCTACATGGCCGGAAAGCTCTTGCCAATATCGCCTTCCCCTCCATCAACATGTTCAGAAACGTCATGCTTTTCCCCAGTGTCAGAGCAATCCACCTTGGGTAGCACTGCAAGTTTTGAAGACAAGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

715

Amino Acids

79.29

Weight (kDa)

7.28

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	361 - 621	1.2e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	361 - 620	5.6e-46	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014788)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g04460
malus_domestica	MD02G1269800.v1.1 MD07G1084900.v1.1
prunus_persica	Prupe.2G050000_v2.0.a1 Prupe.2G050000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0329671
rosa_laevigata	RLG00000029871
rosa_multiflora	Rmu_sc0004219.1_g000006 Rmu_sc0004805.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320790
rosa_rugosa	Rorug01G0081900
rosa_samantha	Rh1AG100400 Rh1BG079600 Rh1CG096000 Rh1DG102200
rosa_wichuraiana	Rw1G007810 Rw1G007930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	325, 1767
Acc36I	ACCTGC	1 cut(s)	995
AccB1I	GGYRCC	1 cut(s)	1570
AccI	GTMKAC	1 cut(s)	1116
AciI	CCGC	2 cut(s)	696, 1077
AclWI	GGATC	7 cut(s)	25, 894, 1261, 1323, 1530, 1820, 1833
AcoI	YGGCCR	1 cut(s)	2025
AcsI	RAATTY	5 cut(s)	463, 971, 979, 1190, 1234
AcuI	CTGAAG	3 cut(s)	795, 1116, 1221
AdeI	CACNNNGTG	1 cut(s)	1970
AfaI	GTAC	3 cut(s)	157, 351, 1212
AfiI	CCNNNNNNNGG	3 cut(s)	716, 1019, 2015
AflIII	ACRYGT	2 cut(s)	470, 2066
AgsI	TTSAA	9 cut(s)	74, 248, 509, 759, 809, 878, 984, 1720, 2135
AjiI	CACGTC	1 cut(s)	1435
AjnI	CCWGG	7 cut(s)	33, 103, 138, 569, 613, 1340, 1820
AjuI	GAANNNNNNNTTGG	4 cut(s)	1089, 1121, 2035, 2067
Alw21I	GWGCWC	1 cut(s)	68
Alw26I	GTCTC	6 cut(s)	175, 568, 1026, 1432, 1820, 1902
AlwI	GGATC	7 cut(s)	25, 894, 1261, 1323, 1530, 1820, 1833
AlwNI	CAGNNNCTG	2 cut(s)	389, 554
AoxI	GGCC	6 cut(s)	358, 520, 707, 1343, 1661, 2025
ApeKI	GCWGC	6 cut(s)	380, 389, 551, 745, 1058, 1385
ApoI	RAATTY	5 cut(s)	463, 971, 979, 1190, 1234
AspLEI	GCGC	3 cut(s)	326, 564, 1768
AspS9I	GGNCC	2 cut(s)	359, 521
AsuHPI	GGTGA	5 cut(s)	40, 128, 1150, 1810, 1991
BamHI	GGATCC	1 cut(s)	1825
BanI	GGYRCC	1 cut(s)	1570
BanII	GRGCYC	2 cut(s)	908, 1955
BarI	GAAGNNNNNNTAC	2 cut(s)	1194, 1226
BauI	CACGAG	1 cut(s)	1454
BbsI	GAAGAC	4 cut(s)	644, 1276, 1521, 2142
Bbv12I	GWGCWC	1 cut(s)	68
BbvI	GCAGC	6 cut(s)	367, 376, 563, 757, 1045, 1372
BccI	CCATC	7 cut(s)	367, 370, 1017, 1061, 1695, 1786, 2068
BciT130I	CCWGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
BciVI	GTATCC	1 cut(s)	185
BcoDI	GTCTC	6 cut(s)	175, 568, 1026, 1432, 1820, 1902
BfaI	CTAG	2 cut(s)	153, 1481
BfmI	CTRYAG	2 cut(s)	381, 1665
BfuAI	ACCTGC	1 cut(s)	995
BfuI	GTATCC	1 cut(s)	185
BisI	GCNGC	6 cut(s)	381, 390, 552, 746, 1059, 1386
BlsI	GCNGC	6 cut(s)	382, 391, 553, 747, 1060, 1387
BmcAI	AGTACT	1 cut(s)	351
Bme1390I	CCNGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
BmgBI	CACGTC	1 cut(s)	1435
BmgT120I	GGNCC	2 cut(s)	359, 521
BmiI	GGNNCC	4 cut(s)	905, 1280, 1572, 1827
BmrFI	CCNGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
BmrI	ACTGGG	2 cut(s)	1958, 2087
BmsI	GCATC	6 cut(s)	28, 50, 376, 673, 1753, 1786
BmuI	ACTGGG	2 cut(s)	1958, 2087
BpiI	GAAGAC	4 cut(s)	644, 1276, 1521, 2142
BpmI	CTGGAG	3 cut(s)	636, 1401, 1992
Bsa29I	ATCGAT	1 cut(s)	1525
BsaBI	GATNNNNATC	2 cut(s)	1370, 1776
BsaI	GGTCTC	1 cut(s)	1432
BsaJI	CCNNGG	7 cut(s)	104, 704, 763, 1177, 1751, 1821, 2112
BsaXI	ACNNNNNCTCC	2 cut(s)	1263, 1293
Bsc4I	CCNNNNNNNGG	3 cut(s)	716, 1019, 2015
Bse1I	ACTGG	5 cut(s)	213, 838, 1384, 1953, 2093
Bse8I	GATNNNNATC	2 cut(s)	1370, 1776
BseBI	CCWGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
BseCI	ATCGAT	1 cut(s)	1525
BseDI	CCNNGG	7 cut(s)	104, 704, 763, 1177, 1751, 1821, 2112
BseGI	GGATG	7 cut(s)	43, 115, 492, 1028, 1422, 1706, 1797
BseJI	GATNNNNATC	2 cut(s)	1370, 1776
BseLI	CCNNNNNNNGG	3 cut(s)	716, 1019, 2015
BseMII	CTCAG	5 cut(s)	29, 323, 506, 1228, 1363
BseNI	ACTGG	5 cut(s)	213, 838, 1384, 1953, 2093
BseRI	GAGGAG	2 cut(s)	287, 849
BseXI	GCAGC	6 cut(s)	367, 376, 563, 757, 1045, 1372
BseYI	CCCAGC	2 cut(s)	176, 1918
BsgI	GTGCAG	1 cut(s)	973
BshFI	GGCC	6 cut(s)	360, 522, 709, 1345, 1663, 2027
BshNI	GGYRCC	1 cut(s)	1570
BshVI	ATCGAT	1 cut(s)	1525
BsiHKAI	GWGCWC	1 cut(s)	68
BsiSI	CCGG	1 cut(s)	2028
BslFI	GGGAC	3 cut(s)	781, 839, 1445
BslI	CCNNNNNNNGG	3 cut(s)	716, 1019, 2015
BsmAI	GTCTC	6 cut(s)	175, 568, 1026, 1432, 1820, 1902
BsmBI	CGTCTC	1 cut(s)	568
BsmFI	GGGAC	3 cut(s)	781, 839, 1445
BsmI	GAATGC	1 cut(s)	326
BsnI	GGCC	6 cut(s)	360, 522, 709, 1345, 1663, 2027
Bso31I	GGTCTC	1 cut(s)	1432
Bsp1286I	GDGCHC	3 cut(s)	68, 908, 1955
Bsp143I	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
Bsp19I	CCATGG	1 cut(s)	704
BspACI	CCGC	2 cut(s)	696, 1077
BspANI	GGCC	6 cut(s)	360, 522, 709, 1345, 1663, 2027
BspCNI	CTCAG	5 cut(s)	28, 322, 507, 1227, 1362
BspDI	ATCGAT	1 cut(s)	1525
BspHI	TCATGA	1 cut(s)	168
BspLI	GGNNCC	4 cut(s)	905, 1280, 1572, 1827
BspMAI	CTGCAG	1 cut(s)	385
BspMI	ACCTGC	1 cut(s)	995
BspPI	GGATC	7 cut(s)	25, 894, 1261, 1323, 1530, 1820, 1833
BspQI	GCTCTTC	1 cut(s)	1960
BspT107I	GGYRCC	1 cut(s)	1570
BspTNI	GGTCTC	1 cut(s)	1432
BsrI	ACTGG	5 cut(s)	213, 838, 1384, 1953, 2093
BssECI	CCNNGG	7 cut(s)	104, 704, 763, 1177, 1751, 1821, 2112
BssMI	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
BssSI	CACGAG	1 cut(s)	1454
BssT1I	CCWWGG	5 cut(s)	704, 763, 1177, 1751, 2112
Bst2BI	CACGAG	1 cut(s)	1454
Bst2UI	CCWGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
Bst4CI	ACNGT	4 cut(s)	186, 994, 1307, 1970
Bst6I	CTCTTC	4 cut(s)	246, 832, 1022, 1960
BstAPI	GCANNNNNTGC	3 cut(s)	389, 996, 1774
BstC8I	GCNNGC	4 cut(s)	358, 545, 549, 1171
BstDEI	CTNAG	5 cut(s)	15, 309, 515, 1214, 1349
BstDSI	CCRYGG	1 cut(s)	704
BstF5I	GGATG	7 cut(s)	43, 115, 492, 1028, 1422, 1706, 1797
BstHHI	GCGC	3 cut(s)	326, 564, 1768
BstKTI	GATC	8 cut(s)	33, 889, 1020, 1256, 1318, 1525, 1529, 1828
BstMAI	GTCTC	6 cut(s)	175, 568, 1026, 1432, 1820, 1902
BstMBI	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
BstMWI	GCNNNNNNNGC	7 cut(s)	386, 389, 996, 1382, 1774, 1950, 2047
BstNI	CCWGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
BstNSI	RCATGY	2 cut(s)	474, 2070
BstSCI	CCNGG	7 cut(s)	33, 103, 138, 569, 613, 1340, 1820
BstSFI	CTRYAG	2 cut(s)	381, 1665
BstV1I	GCAGC	6 cut(s)	367, 376, 563, 757, 1045, 1372
BstV2I	GAAGAC	4 cut(s)	644, 1276, 1521, 2142
BstX2I	RGATCY	1 cut(s)	1825
BstYI	RGATCY	1 cut(s)	1825
Bsu15I	ATCGAT	1 cut(s)	1525
BsuI	GTATCC	1 cut(s)	185
BsuRI	GGCC	6 cut(s)	360, 522, 709, 1345, 1663, 2027
BsuTUI	ATCGAT	1 cut(s)	1525
BtgI	CCRYGG	1 cut(s)	704
BtrI	CACGTC	1 cut(s)	1435
BtsCI	GGATG	7 cut(s)	43, 115, 492, 1028, 1422, 1706, 1797
BtsI	GCAGTG	1 cut(s)	2121
BtsIMutI	CAGTG	2 cut(s)	2100, 2121
BveI	ACCTGC	1 cut(s)	995
Cac8I	GCNNGC	4 cut(s)	358, 545, 549, 1171
CaiI	CAGNNNCTG	2 cut(s)	389, 554
CciI	TCATGA	1 cut(s)	168
CfoI	GCGC	3 cut(s)	326, 564, 1768
Cfr13I	GGNCC	2 cut(s)	359, 521
ClaI	ATCGAT	1 cut(s)	1525
CsiI	ACCWGGT	1 cut(s)	138
Csp6I	GTAC	3 cut(s)	156, 350, 1211
CviQI	GTAC	3 cut(s)	156, 350, 1211
DdeI	CTNAG	5 cut(s)	15, 309, 515, 1214, 1349
DpnI	GATC	8 cut(s)	32, 888, 1019, 1255, 1317, 1524, 1528, 1827
DpnII	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
DraI	TTTAAA	1 cut(s)	976
DraIII	CACNNNGTG	1 cut(s)	1970
EaeI	YGGCCR	1 cut(s)	2025
Eam1104I	CTCTTC	4 cut(s)	246, 832, 1022, 1960
EarI	CTCTTC	4 cut(s)	246, 832, 1022, 1960
Eco130I	CCWWGG	5 cut(s)	704, 763, 1177, 1751, 2112
Eco147I	AGGCCT	2 cut(s)	1345, 1663
Eco24I	GRGCYC	2 cut(s)	908, 1955
Eco31I	GGTCTC	1 cut(s)	1432
Eco57I	CTGAAG	3 cut(s)	795, 1116, 1221
EcoRII	CCWGG	7 cut(s)	33, 103, 138, 569, 613, 1340, 1820
EcoT14I	CCWWGG	5 cut(s)	704, 763, 1177, 1751, 2112
EcoT22I	ATGCAT	1 cut(s)	43
EcoT38I	GRGCYC	2 cut(s)	908, 1955
ErhI	CCWWGG	5 cut(s)	704, 763, 1177, 1751, 2112
Esp3I	CGTCTC	1 cut(s)	568
FalI	AAGNNNNNCTT	4 cut(s)	437, 469, 1019, 1051
FaqI	GGGAC	3 cut(s)	781, 839, 1445
FblI	GTMKAC	1 cut(s)	1116
Fnu4HI	GCNGC	6 cut(s)	381, 390, 552, 746, 1059, 1386
FokI	GGATG	7 cut(s)	50, 122, 499, 1035, 1409, 1713, 1804
FriOI	GRGCYC	2 cut(s)	908, 1955
Fsp4HI	GCNGC	6 cut(s)	381, 390, 552, 746, 1059, 1386
FspAI	RTGCGCAY	1 cut(s)	1767
FspBI	CTAG	2 cut(s)	153, 1481
FspI	TGCGCA	2 cut(s)	325, 1767
GlaI	GCGC	3 cut(s)	325, 563, 1767
GluI	GCNGC	6 cut(s)	381, 390, 552, 746, 1059, 1386
GsaI	CCCAGC	2 cut(s)	180, 1922
GsuI	CTGGAG	3 cut(s)	636, 1401, 1992
HaeIII	GGCC	6 cut(s)	360, 522, 709, 1345, 1663, 2027
HapII	CCGG	1 cut(s)	2028
HhaI	GCGC	3 cut(s)	326, 564, 1768
Hin6I	GCGC	3 cut(s)	324, 562, 1766
HinP1I	GCGC	3 cut(s)	324, 562, 1766
HincII	GTYRAC	1 cut(s)	1602
HindII	GTYRAC	1 cut(s)	1602
HindIII	AAGCTT	2 cut(s)	1171, 1676
HinfI	GANTC	6 cut(s)	209, 914, 1472, 1517, 1931, 1961
HpaII	CCGG	1 cut(s)	2028
HphI	GGTGA	5 cut(s)	40, 128, 1150, 1810, 1991
Hpy166II	GTNNAC	4 cut(s)	1117, 1288, 1602, 1973
Hpy188III	TCNNGA	5 cut(s)	169, 248, 422, 809, 2009
Hpy8I	GTNNAC	4 cut(s)	1117, 1288, 1602, 1973
HpyAV	CCTTC	5 cut(s)	795, 1091, 1259, 2006, 2061
HpyCH4III	ACNGT	4 cut(s)	186, 994, 1307, 1970
HpyCH4IV	ACGT	6 cut(s)	158, 410, 577, 1434, 1449, 2078
HpyF10VI	GCNNNNNNNGC	7 cut(s)	386, 389, 996, 1382, 1774, 1950, 2047
HpyF3I	CTNAG	5 cut(s)	15, 309, 515, 1214, 1349
HpySE526I	ACGT	6 cut(s)	158, 410, 577, 1434, 1449, 2078
HspAI	GCGC	3 cut(s)	324, 562, 1766
Kzo9I	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
LguI	GCTCTTC	1 cut(s)	1960
LmnI	GCTCC	4 cut(s)	404, 903, 1284, 1382
Lsp1109I	GCAGC	6 cut(s)	367, 376, 563, 757, 1045, 1372
LweI	GCATC	6 cut(s)	28, 50, 376, 673, 1753, 1786
MabI	ACCWGGT	1 cut(s)	138
MaeI	CTAG	2 cut(s)	153, 1481
MaeII	ACGT	6 cut(s)	158, 410, 577, 1434, 1449, 2078
MaeIII	GTNAC	4 cut(s)	281, 494, 1458, 1979
MalI	GATC	8 cut(s)	32, 888, 1019, 1255, 1317, 1524, 1528, 1827
MboI	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
MfeI	CAATTG	2 cut(s)	531, 864
MflI	RGATCY	1 cut(s)	1825
MhlI	GDGCHC	3 cut(s)	68, 908, 1955
MlyI	GAGTC	1 cut(s)	1511
MmeI	TCCRAC	1 cut(s)	1531
Mph1103I	ATGCAT	1 cut(s)	43
MseI	TTAA	7 cut(s)	144, 333, 975, 1194, 1397, 1742, 1841
MslI	CAYNNNNRTG	4 cut(s)	1164, 1467, 1655, 2065
MspA1I	CMGCKG	1 cut(s)	554
MspI	CCGG	1 cut(s)	2028
MspR9I	CCNGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
MunI	CAATTG	2 cut(s)	531, 864
Mva1269I	GAATGC	1 cut(s)	326
MvaI	CCWGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
MwoI	GCNNNNNNNGC	7 cut(s)	386, 389, 996, 1382, 1774, 1950, 2047
NcoI	CCATGG	1 cut(s)	704
NdeII	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
NlaIV	GGNNCC	4 cut(s)	905, 1280, 1572, 1827
NmuCI	GTSAC	2 cut(s)	1458, 1979
NsbI	TGCGCA	2 cut(s)	325, 1767
NsiI	ATGCAT	1 cut(s)	43
NspI	RCATGY	2 cut(s)	474, 2070
PagI	TCATGA	1 cut(s)	168
PceI	AGGCCT	2 cut(s)	1345, 1663
PciI	ACATGT	2 cut(s)	470, 2066
PciSI	GCTCTTC	1 cut(s)	1960
PctI	GAATGC	1 cut(s)	326
PfeI	GAWTC	5 cut(s)	209, 914, 1472, 1931, 1961
PfoI	TCCNGGA	1 cut(s)	33
PkrI	GCNGC	6 cut(s)	382, 391, 553, 747, 1060, 1387
PleI	GAGTC	1 cut(s)	1511
PpsI	GAGTC	1 cut(s)	1511
PscI	ACATGT	2 cut(s)	470, 2066
Psp6I	CCWGG	7 cut(s)	33, 103, 138, 569, 613, 1340, 1820
PspFI	CCCAGC	2 cut(s)	176, 1918
PspGI	CCWGG	7 cut(s)	33, 103, 138, 569, 613, 1340, 1820
PspN4I	GGNNCC	4 cut(s)	905, 1280, 1572, 1827
PspPI	GGNCC	2 cut(s)	359, 521
PstI	CTGCAG	1 cut(s)	385
PstNI	CAGNNNCTG	2 cut(s)	389, 554
PsuI	RGATCY	1 cut(s)	1825
PvuII	CAGCTG	1 cut(s)	554
RsaI	GTAC	3 cut(s)	157, 351, 1212
RsaNI	GTAC	3 cut(s)	156, 350, 1211
RseI	CAYNNNNRTG	4 cut(s)	1164, 1467, 1655, 2065
SapI	GCTCTTC	1 cut(s)	1960
SaqAI	TTAA	7 cut(s)	144, 333, 975, 1194, 1397, 1742, 1841
SatI	GCNGC	6 cut(s)	381, 390, 552, 746, 1059, 1386
Sau3AI	GATC	8 cut(s)	30, 886, 1017, 1253, 1315, 1522, 1526, 1825
Sau96I	GGNCC	2 cut(s)	359, 521
ScaI	AGTACT	1 cut(s)	351
SchI	GAGTC	1 cut(s)	1511
ScrFI	CCNGG	7 cut(s)	35, 105, 140, 571, 615, 1342, 1822
SduI	GDGCHC	3 cut(s)	68, 908, 1955
SexAI	ACCWGGT	1 cut(s)	138
SfaNI	GCATC	6 cut(s)	28, 50, 376, 673, 1753, 1786
SfcI	CTRYAG	2 cut(s)	381, 1665
SmiMI	CAYNNNNRTG	4 cut(s)	1164, 1467, 1655, 2065
SseBI	AGGCCT	2 cut(s)	1345, 1663
SsiI	CCGC	2 cut(s)	696, 1077
SspMI	CTAG	2 cut(s)	153, 1481
StuI	AGGCCT	2 cut(s)	1345, 1663
StyD4I	CCNGG	7 cut(s)	33, 103, 138, 569, 613, 1340, 1820
StyI	CCWWGG	5 cut(s)	704, 763, 1177, 1751, 2112
TaaI	ACNGT	4 cut(s)	186, 994, 1307, 1970
TaiI	ACGT	6 cut(s)	161, 413, 580, 1437, 1452, 2081
TaqI	TCGA	4 cut(s)	62, 482, 1525, 1746
TatI	WGTACW	2 cut(s)	349, 1210
TfiI	GAWTC	5 cut(s)	209, 914, 1472, 1931, 1961
Tru1I	TTAA	7 cut(s)	144, 333, 975, 1194, 1397, 1742, 1841
Tru9I	TTAA	7 cut(s)	144, 333, 975, 1194, 1397, 1742, 1841
TscAI	CASTG	2 cut(s)	2100, 2128
TseFI	GTSAC	2 cut(s)	1458, 1979
TseI	GCWGC	6 cut(s)	380, 389, 551, 745, 1058, 1385
Tsp45I	GTSAC	2 cut(s)	1458, 1979
TspGWI	ACGGA	1 cut(s)	284
TspRI	CASTG	2 cut(s)	2100, 2128
XapI	RAATTY	5 cut(s)	463, 971, 979, 1190, 1234
XceI	RCATGY	2 cut(s)	474, 2070
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1020
XmiI	GTMKAC	1 cut(s)	1116
XspI	CTAG	2 cut(s)	153, 1481
ZrmI	AGTACT	1 cut(s)	351
Zsp2I	ATGCAT	1 cut(s)	43

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.