component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0165331 RchiOBHm_Chr2g0165451 |
| rosa_laevigata | RLG00000021526 |
| rosa_multiflora | Rmu_sc0000655.1_g000019 |
| rosa_samantha | Rh2BG594100 |
| rosa_wichuraiana | Rw2G048440 Rw2G048490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 64 |
| AccII | CGCG | 1 cut(s) | 64 |
| AcoI | YGGCCR | 1 cut(s) | 147 |
| AcsI | RAATTY | 1 cut(s) | 142 |
| AfaI | GTAC | 2 cut(s) | 34, 89 |
| AfeI | AGCGCT | 1 cut(s) | 136 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 100, 370, 428 |
| AgsI | TTSAA | 4 cut(s) | 82, 190, 211, 307 |
| AjiI | CACGTC | 1 cut(s) | 175 |
| AluBI | AGCT | 1 cut(s) | 247 |
| AluI | AGCT | 1 cut(s) | 247 |
| Alw21I | GWGCWC | 1 cut(s) | 174 |
| Aor51HI | AGCGCT | 1 cut(s) | 136 |
| AoxI | GGCC | 2 cut(s) | 147, 361 |
| ApeKI | GCWGC | 1 cut(s) | 244 |
| ApoI | RAATTY | 1 cut(s) | 142 |
| AspLEI | GCGC | 2 cut(s) | 66, 137 |
| AspS9I | GGNCC | 3 cut(s) | 103, 235, 361 |
| AvaII | GGWCC | 2 cut(s) | 103, 235 |
| BalI | TGGCCA | 1 cut(s) | 149 |
| Bbv12I | GWGCWC | 1 cut(s) | 174 |
| BbvI | GCAGC | 1 cut(s) | 256 |
| BccI | CCATC | 1 cut(s) | 158 |
| BfoI | RGCGCY | 1 cut(s) | 138 |
| BfuAI | ACCTGC | 1 cut(s) | 64 |
| BisI | GCNGC | 1 cut(s) | 245 |
| BlsI | GCNGC | 1 cut(s) | 246 |
| Bme18I | GGWCC | 2 cut(s) | 103, 235 |
| BmgBI | CACGTC | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 3 cut(s) | 103, 235, 361 |
| BmiI | GGNNCC | 1 cut(s) | 105 |
| BmsI | GCATC | 3 cut(s) | 68, 337, 395 |
| BpmI | CTGGAG | 1 cut(s) | 119 |
| BpuEI | CTTGAG | 1 cut(s) | 151 |
| BsaJI | CCNNGG | 2 cut(s) | 369, 427 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 100, 370, 428 |
| Bse1I | ACTGG | 1 cut(s) | 102 |
| BseDI | CCNNGG | 2 cut(s) | 369, 427 |
| BseGI | GGATG | 1 cut(s) | 379 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 100, 370, 428 |
| BseMII | CTCAG | 1 cut(s) | 159 |
| BseNI | ACTGG | 1 cut(s) | 102 |
| BseXI | GCAGC | 1 cut(s) | 256 |
| Bsh1236I | CGCG | 1 cut(s) | 64 |
| BshFI | GGCC | 2 cut(s) | 149, 363 |
| BsiHKAI | GWGCWC | 1 cut(s) | 174 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 100, 370, 428 |
| BsnI | GGCC | 2 cut(s) | 149, 363 |
| Bsp1286I | GDGCHC | 1 cut(s) | 174 |
| Bsp1407I | TGTACA | 1 cut(s) | 87 |
| BspANI | GGCC | 2 cut(s) | 149, 363 |
| BspCNI | CTCAG | 1 cut(s) | 160 |
| BspFNI | CGCG | 1 cut(s) | 64 |
| BspLI | GGNNCC | 1 cut(s) | 105 |
| BspMI | ACCTGC | 1 cut(s) | 64 |
| BsrGI | TGTACA | 1 cut(s) | 87 |
| BsrI | ACTGG | 1 cut(s) | 102 |
| BssECI | CCNNGG | 2 cut(s) | 369, 427 |
| BssT1I | CCWWGG | 2 cut(s) | 369, 427 |
| BstAUI | TGTACA | 1 cut(s) | 87 |
| BstDEI | CTNAG | 2 cut(s) | 168, 318 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 98 |
| BstF5I | GGATG | 1 cut(s) | 379 |
| BstFNI | CGCG | 1 cut(s) | 64 |
| BstH2I | RGCGCY | 1 cut(s) | 138 |
| BstHHI | GCGC | 2 cut(s) | 66, 137 |
| BstUI | CGCG | 1 cut(s) | 64 |
| BstV1I | GCAGC | 1 cut(s) | 256 |
| BsuRI | GGCC | 2 cut(s) | 149, 363 |
| BtgZI | GCGATG | 1 cut(s) | 45 |
| BtrI | CACGTC | 1 cut(s) | 175 |
| BtsCI | GGATG | 1 cut(s) | 379 |
| BtsIMutI | CAGTG | 1 cut(s) | 165 |
| BveI | ACCTGC | 1 cut(s) | 64 |
| CfoI | GCGC | 2 cut(s) | 66, 137 |
| Cfr13I | GGNCC | 3 cut(s) | 103, 235, 361 |
| Csp6I | GTAC | 2 cut(s) | 33, 88 |
| CviAII | CATG | 1 cut(s) | 108 |
| CviJI | RGCY | 6 cut(s) | 149, 247, 363, 368, 421, 426 |
| CviKI_1 | RGCY | 6 cut(s) | 149, 247, 363, 368, 421, 426 |
| CviQI | GTAC | 2 cut(s) | 33, 88 |
| DdeI | CTNAG | 2 cut(s) | 168, 318 |
| DraI | TTTAAA | 1 cut(s) | 273 |
| EaeI | YGGCCR | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 2 cut(s) | 369, 427 |
| Eco47I | GGWCC | 2 cut(s) | 103, 235 |
| Eco47III | AGCGCT | 1 cut(s) | 136 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 98 |
| EcoO109I | RGGNCCY | 1 cut(s) | 103 |
| EcoT14I | CCWWGG | 2 cut(s) | 369, 427 |
| ErhI | CCWWGG | 2 cut(s) | 369, 427 |
| FaeI | CATG | 1 cut(s) | 111 |
| FaiI | YATR | 3 cut(s) | 21, 109, 260 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 336, 368 |
| FatI | CATG | 1 cut(s) | 107 |
| Fnu4HI | GCNGC | 1 cut(s) | 245 |
| FokI | GGATG | 1 cut(s) | 386 |
| Fsp4HI | GCNGC | 1 cut(s) | 245 |
| GlaI | GCGC | 2 cut(s) | 65, 136 |
| GluI | GCNGC | 1 cut(s) | 245 |
| GsuI | CTGGAG | 1 cut(s) | 119 |
| HaeII | RGCGCY | 1 cut(s) | 138 |
| HaeIII | GGCC | 2 cut(s) | 149, 363 |
| HhaI | GCGC | 2 cut(s) | 66, 137 |
| Hin1II | CATG | 1 cut(s) | 111 |
| Hin6I | GCGC | 2 cut(s) | 64, 135 |
| HinP1I | GCGC | 2 cut(s) | 64, 135 |
| HinfI | GANTC | 1 cut(s) | 299 |
| Hpy166II | GTNNAC | 2 cut(s) | 35, 127 |
| Hpy188III | TCNNGA | 2 cut(s) | 25, 208 |
| Hpy8I | GTNNAC | 2 cut(s) | 35, 127 |
| HpyAV | CCTTC | 2 cut(s) | 192, 205 |
| HpyCH4IV | ACGT | 2 cut(s) | 174, 280 |
| HpyCH4V | TGCA | 3 cut(s) | 59, 350, 408 |
| HpyF3I | CTNAG | 2 cut(s) | 168, 318 |
| HpySE526I | ACGT | 2 cut(s) | 174, 280 |
| Hsp92II | CATG | 1 cut(s) | 111 |
| HspAI | GCGC | 2 cut(s) | 64, 135 |
| LpnPI | CCDG | 6 cut(s) | 10, 69, 83, 324, 382, 424 |
| Lsp1109I | GCAGC | 1 cut(s) | 256 |
| LweI | GCATC | 3 cut(s) | 68, 337, 395 |
| MaeII | ACGT | 2 cut(s) | 174, 280 |
| MaeIII | GTNAC | 1 cut(s) | 163 |
| MboII | GAAGA | 2 cut(s) | 356, 414 |
| MhlI | GDGCHC | 1 cut(s) | 174 |
| MlsI | TGGCCA | 1 cut(s) | 149 |
| MluCI | AATT | 1 cut(s) | 142 |
| MluNI | TGGCCA | 1 cut(s) | 149 |
| MnlI | CCTC | 3 cut(s) | 94, 188, 370 |
| Mox20I | TGGCCA | 1 cut(s) | 149 |
| MscI | TGGCCA | 1 cut(s) | 149 |
| MseI | TTAA | 2 cut(s) | 68, 272 |
| Msp20I | TGGCCA | 1 cut(s) | 149 |
| MvnI | CGCG | 1 cut(s) | 64 |
| NlaIII | CATG | 1 cut(s) | 111 |
| NlaIV | GGNNCC | 1 cut(s) | 105 |
| NmuCI | GTSAC | 1 cut(s) | 163 |
| PfeI | GAWTC | 1 cut(s) | 299 |
| PkrI | GCNGC | 1 cut(s) | 246 |
| PpuMI | RGGWCCY | 1 cut(s) | 103 |
| Psp5II | RGGWCCY | 1 cut(s) | 103 |
| PspN4I | GGNNCC | 1 cut(s) | 105 |
| PspPI | GGNCC | 3 cut(s) | 103, 235, 361 |
| PspPPI | RGGWCCY | 1 cut(s) | 103 |
| RsaI | GTAC | 2 cut(s) | 34, 89 |
| RsaNI | GTAC | 2 cut(s) | 33, 88 |
| SaqAI | TTAA | 2 cut(s) | 68, 272 |
| SatI | GCNGC | 1 cut(s) | 245 |
| Sau96I | GGNCC | 3 cut(s) | 103, 235, 361 |
| SduI | GDGCHC | 1 cut(s) | 174 |
| SetI | ASST | 9 cut(s) | 34, 58, 96, 165, 177, 249, 283, 290, 413 |
| SfaNI | GCATC | 3 cut(s) | 68, 337, 395 |
| SinI | GGWCC | 2 cut(s) | 103, 235 |
| SmlI | CTYRAG | 1 cut(s) | 130 |
| SmoI | CTYRAG | 1 cut(s) | 130 |
| Sse9I | AATT | 1 cut(s) | 142 |
| SspI | AATATT | 1 cut(s) | 223 |
| StyI | CCWWGG | 2 cut(s) | 369, 427 |
| TaiI | ACGT | 2 cut(s) | 177, 283 |
| TasI | AATT | 1 cut(s) | 142 |
| TatI | WGTACW | 1 cut(s) | 87 |
| TfiI | GAWTC | 1 cut(s) | 299 |
| Tru1I | TTAA | 2 cut(s) | 68, 272 |
| Tru9I | TTAA | 2 cut(s) | 68, 272 |
| TscAI | CASTG | 1 cut(s) | 172 |
| TseFI | GTSAC | 1 cut(s) | 163 |
| TseI | GCWGC | 1 cut(s) | 244 |
| Tsp45I | GTSAC | 1 cut(s) | 163 |
| TspDTI | ATGAA | 1 cut(s) | 174 |
| TspRI | CASTG | 1 cut(s) | 172 |
| VpaK11BI | GGWCC | 2 cut(s) | 103, 235 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 98 |
| XapI | RAATTY | 1 cut(s) | 142 |