Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004739

Physical Location & Seq

Genomic Coordinates Forward (+)

86952593 .. 86957638

Gene Structure 5046 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G050400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGGCATCAAGAACAAGAAAGCCTCTCCACAACCTTGCTGAAACAATTCATTCCCTGCTAGGACAAAAGTCGCATCTTACTTCCAGTTGGGTTAAATCTGTCTATGAACTTGCTATCTTGACTGCCCGGATAAATGAATTGAACAGACAGCGAAAGCAGTTTTTAAATGAATTTCTGGATTTGAAAGGTAATATTCGAGTATTTTGTCGTATAAGACCCATTGAAATGGGGGAGAACTTTGGCCGTTTTAGGCCTGTTGTAGCTTTGGATTCAAGTAATGTTCTTCTAAGATTTTCGGATAATAAGAATAAAAGTTACAGTTTTGACAAGGTTTTCCACCATGGCTCATCGCAAGATGAAGTCTTTTCAGAAGTTGAACCAGTTATCAAATCAGCACTGGATGGCTATAACGCTTGCATCTTTGCATATGGACAGACAGGGACAGGGAAAACCTTCACCATGGAAGGAATTCCAGAAGATCCTGGAATGGTGCCCCGTGCAATTGAAGCACTGTTTAAGCAAGCCACGGATAGCAACCATGTGTATCTCTTTAGTTTCAGTATGCTTGAGATTTACATGGGAAATCTGAGAGACCTGCTAATCTCTCAACCAACAAAGCCAATGGATCCAATGCCATGCCTCTCAATCCACACAGATCCAAAGGGTGAGATTGAAATTGAAAACCTCGTGGCTATTCGAGTGAGTGGCTTGACCCAAGCTATAAAACTATACAGATTCGGGTGCCAGTTCAGGTCAACTGCATCGACAAACTGTAACATTACCTCCAGCAGATCCCACTGCTTGATTCGCATATCAATCACATGTAGCGGAGCACCTGAGAGGCGAAGGGAAACAAATAAAGTTTGGTTTGTCGATCTAGGGGGAAGTGAGCGTTTGCTGAAGACAAAGGCATCCGGGAGAAGACTAGAAGAAGGAAAAGCCATTAACTTGTCCCTTTCCTCTCTGGGAGATGTCATCAATGCCCTTCAACTCAGAAAGGGTCATGTACCTTATAGGAACAGCAAGCTGACACAAGTTCTTAAAGACTCCCTTGGAAGGGACTCAAAAACTCTGATGCTTGTCCATGTAAGTCCTAAAGAAGAAGATCTCTGTGAAACAGTATGTTCTTTGAACTTTGCAACAAGAGCGAGAACTATCCATCTGGGGAATACAGACTCGACTGAACAAAGGGAGAAGGAAGTTGCAATGATGAATCTGCAAGAAATAATGAACAAGATTGAAGTTGAGCGCCAGGATGTTAGGATGAGAATCAAGCAGTCAACTCAGGAACTTCAAATTCTGAGTACAGCTGCCTGTTCCACTGAGCAACTGGATAACTCAGTGGATGCTTACCAGTTAATGAATGAAGTGCCCCAACCTAATCTTGAAACAAACAGGAACAATACTGCATATATTTCAGCACCTCCCTTATCCCAGGTACCAAGGTTTATGAGACCTACTGTTTGCAGCAGAAGAAAATCTGGATCAGACCACCTCCTAACTACTGAAGAAAAACTGGAATTCCCTGCAAGAAGGAGAAGACCATTCAATCATTATGCTAAATCCGTGAATTTCCCTGTAAAGGGTATTTCGGGAAACAATTCAGAAGGCAGTATTTCCAGAAATAGCTGTTTAGTGCCTTTGACTGTGAACAAAAGTGCAGATGTTGAGACAAATTACAGTCAAGATCTATCAGAATGTGATATTAAAGAGGTTGTTTCCCCAGACCAGGTAACATCATCAAAATGCTTGAATCAGCACAGGAATCACGTCGTTCATGGTGATAAAAGTAATGCTTGCTCTGGAAAACATTTGAAGGTCGATAAGTGGCTATGCCAGAAGAATGCGCCTGCTAGCAGGAGTCATGTTTATAGGAACAAACGAATTCTAGCTATTCCTACCCCAGAGAAGAAACTAATGTGTAAAGGACAAAAAGAAACAGAAAAATTCCAGGATGAGAAAGTCAATAATTACAAGCTTGCTGTGGAACAGATTGTCAGCCACAACAAATCGGGGAAACATGTGGATGTGGAGGAAATGTTCATGCAAGAAGTGATTATTAGCAAACCTCCCGCTAATATGAACGTCAATGACAATATTGACCCAAAATGTCACTCTGATTCTTTATCGGATGGAATAGTTAAAGAGACAATGATAAATGCACAACACAAACTAGATGACGAGCTGACAGAGAAACACATGCTCAGCAGTATCTATCCACCTGATATTTGGTGCTGCAATTTCAATTCAACTCAAGATGATAATGGAGTCAACTACAGTTCCTTGTCTAACAGCAGCAATTGGTGTCAAATTTCTACCATTGATTTAGCTGATAGTATTTGGGACGCAAGACAAGATTCTAATATCTCAATTTCAAGAATTGAACAAAAGTCAGGCTGCCGACGGTTGCCCATTGTAATAGGTGTGGATGATAGTGAAAAGGAAGACTTGGAAAAATTATCTCAGAGCTCTGGAGAAGGTACATGCCTACAAAAAGTGAGATCTCAAAGAGCTTTATTAATGAAAAATGTAATTCTAGAGGAACCAGTCAAGCCACAACAACTGACAAGATCACAAGACAATAATGTGCACTTAGGAATATGCCATCTTCTTCAACAGAAAATTCAGATATTATGGGCCGGTGCTCTTCTAGGATTAGGATTTCAAAACTTGGGACTTGAGCAGGAATTCTTCCTTGGTTTAATGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin Microtub_bd

Protein Analysis

903

Amino Acids

101.8

Weight (kDa)

8.36

Isoelectric Point (pI)

51.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	48 - 200	2.3e-38	Microtubule binding
Kinesin	PF00225	97 - 386	8.4e-96	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55550
fragaria_vesca	FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040 FvH4_3g46040
malus_domestica	MD03G1001300.v1.1
prunus_persica	Prupe.6G000800_v2.0.a1
pyrus_communis	pycom03g00110
rosa_chinensis	RchiOBHm_Chr5g0084121
rosa_laevigata	RLG00000037083
rosa_multiflora	Rmu_ssc0000372.1_g000094
rosa_roxburghii	Rroxscaffold_1G00000520
rosa_rugosa	Rorug05G0489200 Rorug05G0489200 Rorug05G0489200 Rorug05G0489300
rosa_samantha	Rh5AG541800 Rh5BG567400 Rh5CG589200 Rh5DG575600
rosa_wichuraiana	Rw5G050400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	603
Acc65I	GGTACC	1 cut(s)	1438
AccB1I	GGYRCC	3 cut(s)	490, 741, 1438
AciI	CCGC	2 cut(s)	828, 2073
AclWI	GGATC	6 cut(s)	473, 620, 633, 650, 786, 1492
AcoI	YGGCCR	1 cut(s)	241
AcuI	CTGAAG	2 cut(s)	920, 1527
AfaI	GTAC	4 cut(s)	1008, 1306, 1440, 2482
AfiI	CCNNNNNNNGG	5 cut(s)	1056, 1057, 1582, 1583, 1729
AflIII	ACRYGT	2 cut(s)	821, 2020
AjiI	CACGTC	1 cut(s)	1771
AjnI	CCWGG	5 cut(s)	481, 1251, 1434, 1728, 1950
AjuI	GAANNNNNNNTTGG	2 cut(s)	2679, 2711
AloI	GAACNNNNNNTCC	2 cut(s)	2024, 2056
Alw21I	GWGCWC	4 cut(s)	835, 2471, 2592, 2647
Alw26I	GTCTC	4 cut(s)	585, 1447, 1664, 2141
Alw44I	GTGCAC	1 cut(s)	2588
AlwI	GGATC	6 cut(s)	473, 620, 633, 650, 786, 1492
AoxI	GGCC	3 cut(s)	241, 251, 2637
ApaLI	GTGCAC	1 cut(s)	2588
ApeKI	GCWGC	5 cut(s)	1310, 1467, 2235, 2295, 2397
ArsI	GACNNNNNNTTYG	2 cut(s)	1446, 1478
AseI	ATTAAT	1 cut(s)	2519
Asp700I	GAANNNNTTC	4 cut(s)	45, 452, 468, 1600
Asp718I	GGTACC	1 cut(s)	1438
AspLEI	GCGC	2 cut(s)	1251, 1849
AspS9I	GGNCC	1 cut(s)	2637
AsuC2I	CCSGG	2 cut(s)	127, 916
AsuHPI	GGTGA	3 cut(s)	448, 677, 1793
AsuNHI	GCTAGC	1 cut(s)	1853
BaeGI	GKGCMC	3 cut(s)	495, 1374, 2592
BaeI	ACNNNNGTAYC	2 cut(s)	1430, 1463
BamHI	GGATCC	1 cut(s)	625
BanI	GGYRCC	3 cut(s)	490, 741, 1438
BanII	GRGCYC	1 cut(s)	2471
BauI	CACGAG	1 cut(s)	686
BbsI	GAAGAC	4 cut(s)	908, 928, 1546, 2451
Bbv12I	GWGCWC	4 cut(s)	835, 2471, 2592, 2647
BbvI	GCAGC	5 cut(s)	1297, 1479, 2222, 2307, 2384
BccI	CCATC	4 cut(s)	395, 1167, 2126, 2613
BceAI	ACGGC	1 cut(s)	228
BciT130I	CCWGG	5 cut(s)	483, 1253, 1436, 1730, 1952
BcnI	CCSGG	2 cut(s)	127, 916
BcoDI	GTCTC	4 cut(s)	585, 1447, 1664, 2141
BfaI	CTAG	8 cut(s)	59, 878, 926, 1854, 1889, 2174, 2537, 2651
BfmI	CTRYAG	1 cut(s)	2275
BfoI	RGCGCY	1 cut(s)	1252
BfuAI	ACCTGC	1 cut(s)	603
BglII	AGATCT	3 cut(s)	1105, 1687, 2501
BisI	GCNGC	5 cut(s)	1311, 1468, 2236, 2296, 2398
BlpI	GCTNAGC	1 cut(s)	2204
BlsI	GCNGC	5 cut(s)	1312, 1469, 2237, 2297, 2399
Bme1390I	CCNGG	7 cut(s)	127, 483, 916, 1253, 1436, 1730, 1952
BmgBI	CACGTC	1 cut(s)	1771
BmgT120I	GGNCC	1 cut(s)	2637
BmiI	GGNNCC	5 cut(s)	492, 627, 743, 1440, 2544
BmrFI	CCNGG	7 cut(s)	127, 483, 916, 1253, 1436, 1730, 1952
BmsI	GCATC	7 cut(s)	14, 82, 426, 770, 920, 1065, 1336
BmtI	GCTAGC	1 cut(s)	1857
BoxI	GACNNNNGTC	1 cut(s)	67
BpiI	GAAGAC	4 cut(s)	908, 928, 1546, 2451
BpmI	CTGGAG	2 cut(s)	769, 2493
Bpu1102I	GCTNAGC	1 cut(s)	2204
BpuEI	CTTGAG	3 cut(s)	587, 2238, 2699
BpuMI	CCSGG	2 cut(s)	127, 916
BsaBI	GATNNNNATC	1 cut(s)	1268
BsaI	GGTCTC	2 cut(s)	585, 1447
BsaJI	CCNNGG	7 cut(s)	340, 459, 525, 1051, 1434, 1442, 2695
BsaXI	ACNNNNNCTCC	4 cut(s)	767, 797, 2024, 2054
Bsc4I	CCNNNNNNNGG	5 cut(s)	1056, 1057, 1582, 1583, 1729
Bse118I	RCCGGY	1 cut(s)	2639
Bse1I	ACTGG	8 cut(s)	84, 380, 402, 745, 1335, 1354, 1521, 2546
Bse3DI	GCAATG	1 cut(s)	1212
Bse8I	GATNNNNATC	1 cut(s)	1268
BseBI	CCWGG	5 cut(s)	483, 1253, 1436, 1730, 1952
BseDI	CCNNGG	7 cut(s)	340, 459, 525, 1051, 1434, 1442, 2695
BseGI	GGATG	9 cut(s)	406, 911, 1261, 1269, 1351, 1960, 2032, 2137, 2434
BseJI	GATNNNNATC	1 cut(s)	1268
BseLI	CCNNNNNNNGG	5 cut(s)	1056, 1057, 1582, 1583, 1729
BseMI	GCAATG	1 cut(s)	1212
BseMII	CTCAG	9 cut(s)	578, 828, 1006, 1292, 1298, 1314, 1353, 2218, 2477
BseNI	ACTGG	8 cut(s)	84, 380, 402, 745, 1335, 1354, 1521, 2546
BseSI	GKGCMC	3 cut(s)	495, 1374, 2592
BseXI	GCAGC	5 cut(s)	1297, 1479, 2222, 2307, 2384
BsgI	GTGCAG	1 cut(s)	1680
BshFI	GGCC	3 cut(s)	243, 253, 2639
BshNI	GGYRCC	3 cut(s)	490, 741, 1438
BsiHKAI	GWGCWC	4 cut(s)	835, 2471, 2592, 2647
BsiSI	CCGG	3 cut(s)	127, 915, 2640
BslFI	GGGAC	5 cut(s)	454, 937, 1073, 2357, 2688
BslI	CCNNNNNNNGG	5 cut(s)	1056, 1057, 1582, 1583, 1729
BsmAI	GTCTC	4 cut(s)	585, 1447, 1664, 2141
BsmFI	GGGAC	5 cut(s)	454, 937, 1073, 2357, 2688
BsmI	GAATGC	1 cut(s)	1849
BsnI	GGCC	3 cut(s)	243, 253, 2639
Bso31I	GGTCTC	2 cut(s)	585, 1447
Bsp1286I	GDGCHC	6 cut(s)	495, 835, 1374, 2471, 2592, 2647
Bsp1720I	GCTNAGC	1 cut(s)	2204
Bsp19I	CCATGG	2 cut(s)	340, 459
BspACI	CCGC	2 cut(s)	828, 2073
BspANI	GGCC	3 cut(s)	243, 253, 2639
BspCNI	CTCAG	9 cut(s)	579, 829, 1005, 1293, 1297, 1315, 1352, 2217, 2476
BspLI	GGNNCC	5 cut(s)	492, 627, 743, 1440, 2544
BspMI	ACCTGC	1 cut(s)	603
BspOI	GCTAGC	1 cut(s)	1857
BspPI	GGATC	6 cut(s)	473, 620, 633, 650, 786, 1492
BspQI	GCTCTTC	1 cut(s)	2652
BspT107I	GGYRCC	3 cut(s)	490, 741, 1438
BspTNI	GGTCTC	2 cut(s)	585, 1447
BsrDI	GCAATG	1 cut(s)	1212
BsrFI	RCCGGY	1 cut(s)	2639
BsrI	ACTGG	8 cut(s)	84, 380, 402, 745, 1335, 1354, 1521, 2546
BssAI	RCCGGY	1 cut(s)	2639
BssECI	CCNNGG	7 cut(s)	340, 459, 525, 1051, 1434, 1442, 2695
BssSI	CACGAG	1 cut(s)	686
BssT1I	CCWWGG	5 cut(s)	340, 459, 1051, 1442, 2695
Bst2BI	CACGAG	1 cut(s)	686
Bst2UI	CCWGG	5 cut(s)	483, 1253, 1436, 1730, 1952
Bst4CI	ACNGT	9 cut(s)	320, 513, 773, 1120, 1462, 1648, 1682, 2279, 2406
Bst6I	CTCTTC	1 cut(s)	2652
BstC8I	GCNNGC	7 cut(s)	415, 522, 1025, 1798, 1851, 1855, 1980
BstDSI	CCRYGG	3 cut(s)	340, 459, 525
BstF5I	GGATG	9 cut(s)	406, 911, 1261, 1269, 1351, 1960, 2032, 2137, 2434
BstH2I	RGCGCY	1 cut(s)	1252
BstHHI	GCGC	2 cut(s)	1251, 1849
BstMAI	GTCTC	4 cut(s)	585, 1447, 1664, 2141
BstMWI	GCNNNNNNNGC	3 cut(s)	506, 807, 1145
BstNI	CCWGG	5 cut(s)	483, 1253, 1436, 1730, 1952
BstNSI	RCATGY	4 cut(s)	825, 2024, 2203, 2487
BstPAI	GACNNNNGTC	1 cut(s)	67
BstSCI	CCNGG	7 cut(s)	125, 481, 914, 1251, 1434, 1728, 1950
BstSFI	CTRYAG	1 cut(s)	2275
BstSLI	GKGCMC	3 cut(s)	495, 1374, 2592
BstV1I	GCAGC	5 cut(s)	1297, 1479, 2222, 2307, 2384
BstV2I	GAAGAC	4 cut(s)	908, 928, 1546, 2451
BstX2I	RGATCY	7 cut(s)	478, 625, 655, 791, 1105, 1687, 2501
BstXI	CCANNNNNNTGG	1 cut(s)	226
BstYI	RGATCY	7 cut(s)	478, 625, 655, 791, 1105, 1687, 2501
BsuRI	GGCC	3 cut(s)	243, 253, 2639
BtgI	CCRYGG	3 cut(s)	340, 459, 525
BtgZI	GCGATG	1 cut(s)	333
BtrI	CACGTC	1 cut(s)	1771
BtsCI	GGATG	9 cut(s)	406, 911, 1261, 1269, 1351, 1960, 2032, 2137, 2434
BtsI	GCAGTG	1 cut(s)	796
BtsIMutI	CAGTG	5 cut(s)	395, 509, 796, 1320, 1347
BveI	ACCTGC	1 cut(s)	603
Cac8I	GCNNGC	7 cut(s)	415, 522, 1025, 1798, 1851, 1855, 1980
CfoI	GCGC	2 cut(s)	1251, 1849
Cfr10I	RCCGGY	1 cut(s)	2639
Cfr13I	GGNCC	1 cut(s)	2637
CseI	GACGC	1 cut(s)	2354
CsiI	ACCWGGT	1 cut(s)	1728
Csp6I	GTAC	4 cut(s)	1007, 1305, 1439, 2481
CviQI	GTAC	4 cut(s)	1007, 1305, 1439, 2481
DraI	TTTAAA	1 cut(s)	165
EaeI	YGGCCR	1 cut(s)	241
Eam1104I	CTCTTC	1 cut(s)	2652
EarI	CTCTTC	1 cut(s)	2652
Ecl136II	GAGCTC	1 cut(s)	2469
Eco130I	CCWWGG	5 cut(s)	340, 459, 1051, 1442, 2695
Eco147I	AGGCCT	1 cut(s)	253
Eco24I	GRGCYC	1 cut(s)	2471
Eco31I	GGTCTC	2 cut(s)	585, 1447
Eco53kI	GAGCTC	1 cut(s)	2469
Eco57I	CTGAAG	2 cut(s)	920, 1527
EcoICRI	GAGCTC	1 cut(s)	2469
EcoRI	GAATTC	4 cut(s)	468, 1520, 1884, 2687
EcoRII	CCWGG	5 cut(s)	481, 1251, 1434, 1728, 1950
EcoT14I	CCWWGG	5 cut(s)	340, 459, 1051, 1442, 2695
EcoT38I	GRGCYC	1 cut(s)	2471
ErhI	CCWWGG	5 cut(s)	340, 459, 1051, 1442, 2695
FalI	AAGNNNNNCTT	6 cut(s)	1035, 1067, 1780, 1812, 2432, 2464
FaqI	GGGAC	5 cut(s)	454, 937, 1073, 2357, 2688
FauI	CCCGC	1 cut(s)	2080
FauNDI	CATATG	1 cut(s)	427
Fnu4HI	GCNGC	5 cut(s)	1311, 1468, 2236, 2296, 2398
FokI	GGATG	9 cut(s)	413, 898, 1268, 1276, 1358, 1967, 2039, 2144, 2441
FriOI	GRGCYC	1 cut(s)	2471
Fsp4HI	GCNGC	5 cut(s)	1311, 1468, 2236, 2296, 2398
FspBI	CTAG	8 cut(s)	59, 878, 926, 1854, 1889, 2174, 2537, 2651
GlaI	GCGC	2 cut(s)	1250, 1848
GluI	GCNGC	5 cut(s)	1311, 1468, 2236, 2296, 2398
GsuI	CTGGAG	2 cut(s)	769, 2493
HaeII	RGCGCY	1 cut(s)	1252
HaeIII	GGCC	3 cut(s)	243, 253, 2639
HapII	CCGG	3 cut(s)	127, 915, 2640
HgaI	GACGC	1 cut(s)	2354
HhaI	GCGC	2 cut(s)	1251, 1849
Hin6I	GCGC	2 cut(s)	1249, 1847
HinP1I	GCGC	2 cut(s)	1249, 1847
HincII	GTYRAC	3 cut(s)	756, 1281, 2272
HindII	GTYRAC	3 cut(s)	756, 1281, 2272
HindIII	AAGCTT	1 cut(s)	1976
HpaII	CCGG	3 cut(s)	127, 915, 2640
HphI	GGTGA	3 cut(s)	448, 677, 1793
Hpy166II	GTNNAC	5 cut(s)	756, 1281, 1651, 2272, 2590
Hpy8I	GTNNAC	5 cut(s)	756, 1281, 1651, 2272, 2590
Hpy99I	CGWCG	2 cut(s)	1775, 2406
HpyCH4III	ACNGT	9 cut(s)	320, 513, 773, 1120, 1462, 1648, 1682, 2279, 2406
HpyCH4IV	ACGT	2 cut(s)	1770, 2085
HpyF10VI	GCNNNNNNNGC	3 cut(s)	506, 807, 1145
HpySE526I	ACGT	2 cut(s)	1770, 2085
HspAI	GCGC	2 cut(s)	1249, 1847
KpnI	GGTACC	1 cut(s)	1442
LguI	GCTCTTC	1 cut(s)	2652
LmnI	GCTCC	1 cut(s)	830
Lsp1109I	GCAGC	5 cut(s)	1297, 1479, 2222, 2307, 2384
LweI	GCATC	7 cut(s)	14, 82, 426, 770, 920, 1065, 1336
MabI	ACCWGGT	1 cut(s)	1728
MaeI	CTAG	8 cut(s)	59, 878, 926, 1854, 1889, 2174, 2537, 2651
MaeII	ACGT	2 cut(s)	1770, 2085
MaeIII	GTNAC	4 cut(s)	314, 773, 1732, 2111
MfeI	CAATTG	2 cut(s)	501, 2299
MflI	RGATCY	7 cut(s)	478, 625, 655, 791, 1105, 1687, 2501
MhlI	GDGCHC	6 cut(s)	495, 835, 1374, 2471, 2592, 2647
MlyI	GAGTC	5 cut(s)	1040, 1055, 1169, 1870, 2277
MroXI	GAANNNNTTC	4 cut(s)	45, 452, 468, 1600
MslI	CAYNNNNRTG	3 cut(s)	224, 1744, 2025
MspA1I	CMGCKG	1 cut(s)	1310
MspI	CCGG	3 cut(s)	127, 915, 2640
MspR9I	CCNGG	7 cut(s)	127, 483, 916, 1253, 1436, 1730, 1952
MunI	CAATTG	2 cut(s)	501, 2299
Mva1269I	GAATGC	1 cut(s)	1849
MvaI	CCWGG	5 cut(s)	483, 1253, 1436, 1730, 1952
MwoI	GCNNNNNNNGC	3 cut(s)	506, 807, 1145
NciI	CCSGG	2 cut(s)	127, 916
NcoI	CCATGG	2 cut(s)	340, 459
NdeI	CATATG	1 cut(s)	427
NheI	GCTAGC	1 cut(s)	1853
NlaIV	GGNNCC	5 cut(s)	492, 627, 743, 1440, 2544
NmuCI	GTSAC	1 cut(s)	2111
NspI	RCATGY	4 cut(s)	825, 2024, 2203, 2487
PceI	AGGCCT	1 cut(s)	253
PciI	ACATGT	2 cut(s)	821, 2020
PciSI	GCTCTTC	1 cut(s)	2652
PctI	GAATGC	1 cut(s)	1849
PdmI	GAANNNNTTC	4 cut(s)	45, 452, 468, 1600
PfeI	GAWTC	9 cut(s)	269, 735, 805, 1213, 1269, 1753, 1765, 2120, 2357
PfoI	TCCNGGA	3 cut(s)	481, 914, 1950
PkrI	GCNGC	5 cut(s)	1312, 1469, 2237, 2297, 2399
PleI	GAGTC	5 cut(s)	1040, 1055, 1169, 1869, 2276
PpsI	GAGTC	5 cut(s)	1040, 1055, 1169, 1869, 2276
PscI	ACATGT	2 cut(s)	821, 2020
PshAI	GACNNNNGTC	1 cut(s)	67
PshBI	ATTAAT	1 cut(s)	2519
Psp124BI	GAGCTC	1 cut(s)	2471
Psp6I	CCWGG	5 cut(s)	481, 1251, 1434, 1728, 1950
PspGI	CCWGG	5 cut(s)	481, 1251, 1434, 1728, 1950
PspN4I	GGNNCC	5 cut(s)	492, 627, 743, 1440, 2544
PspPI	GGNCC	1 cut(s)	2637
PsuI	RGATCY	7 cut(s)	478, 625, 655, 791, 1105, 1687, 2501
PvuII	CAGCTG	1 cut(s)	1310
RsaI	GTAC	4 cut(s)	1008, 1306, 1440, 2482
RsaNI	GTAC	4 cut(s)	1007, 1305, 1439, 2481
RseI	CAYNNNNRTG	3 cut(s)	224, 1744, 2025
SacI	GAGCTC	1 cut(s)	2471
SapI	GCTCTTC	1 cut(s)	2652
SatI	GCNGC	5 cut(s)	1311, 1468, 2236, 2296, 2398
Sau96I	GGNCC	1 cut(s)	2637
SchI	GAGTC	5 cut(s)	1040, 1055, 1169, 1870, 2277
ScrFI	CCNGG	7 cut(s)	127, 483, 916, 1253, 1436, 1730, 1952
SduI	GDGCHC	6 cut(s)	495, 835, 1374, 2471, 2592, 2647
SexAI	ACCWGGT	1 cut(s)	1728
SfaNI	GCATC	7 cut(s)	14, 82, 426, 770, 920, 1065, 1336
SfcI	CTRYAG	1 cut(s)	2275
SmiMI	CAYNNNNRTG	3 cut(s)	224, 1744, 2025
SmlI	CTYRAG	3 cut(s)	566, 2253, 2678
SmoI	CTYRAG	3 cut(s)	566, 2253, 2678
SseBI	AGGCCT	1 cut(s)	253
SsiI	CCGC	2 cut(s)	828, 2073
SspI	AATATT	2 cut(s)	193, 2098
SspMI	CTAG	8 cut(s)	59, 878, 926, 1854, 1889, 2174, 2537, 2651
SstI	GAGCTC	1 cut(s)	2471
StuI	AGGCCT	1 cut(s)	253
StyD4I	CCNGG	7 cut(s)	125, 481, 914, 1251, 1434, 1728, 1950
StyI	CCWWGG	5 cut(s)	340, 459, 1051, 1442, 2695
TaaI	ACNGT	9 cut(s)	320, 513, 773, 1120, 1462, 1648, 1682, 2279, 2406
TaiI	ACGT	2 cut(s)	1773, 2088
TaqI	TCGA	6 cut(s)	196, 697, 764, 873, 1178, 1821
TatI	WGTACW	1 cut(s)	1304
TfiI	GAWTC	9 cut(s)	269, 735, 805, 1213, 1269, 1753, 1765, 2120, 2357
TscAI	CASTG	5 cut(s)	402, 516, 803, 1327, 1347
TseFI	GTSAC	1 cut(s)	2111
TseI	GCWGC	5 cut(s)	1310, 1467, 2235, 2295, 2397
Tsp45I	GTSAC	1 cut(s)	2111
TspGWI	ACGGA	2 cut(s)	542, 1555
TspRI	CASTG	5 cut(s)	402, 516, 803, 1327, 1347
VneI	GTGCAC	1 cut(s)	2588
VspI	ATTAAT	1 cut(s)	2519
XbaI	TCTAGA	1 cut(s)	2536
XceI	RCATGY	4 cut(s)	825, 2024, 2203, 2487
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1327, 2226
XmnI	GAANNNNTTC	4 cut(s)	45, 452, 468, 1600
XspI	CTAG	8 cut(s)	59, 878, 926, 1854, 1889, 2174, 2537, 2651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.